Q9Y6D5
Gene name |
ARFGEF2 (ARFGEP2, BIG2) |
Protein name |
Brefeldin A-inhibited guanine nucleotide-exchange protein 2 |
Names |
Brefeldin A-inhibited GEP 2, ADP-ribosylation factor guanine nucleotide-exchange factor 2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:10564 |
EC number |
|
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

3 structures for Q9Y6D5
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
3L8N | X-ray | 286 A | A | 635-836 | PDB |
3SWV | X-ray | 300 A | A | 635-836 | PDB |
AF-Q9Y6D5-F1 | Predicted | AlphaFoldDB |
1178 variants for Q9Y6D5
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
rs374268118 RCV001141899 CA9898083 |
53 | G>V | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000116398 RCV000422117 rs73113975 CA151888 RCV000262014 |
57 | P>S | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA9898135 rs143956045 RCV001252729 RCV001664618 RCV001335420 |
113 | R>Q | Periventricular heterotopia with microcephaly, autosomal recessive Microcephaly [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs753026131 RCV001141900 CA9898170 |
152 | I>V | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000710616 RCV000425899 VAR_037438 RCV000005353 CA213135 rs28937880 |
209 | E>K | Periventricular heterotopia with microcephaly, autosomal recessive PVNH2; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
RCV000162104 rs730882200 RCV000484140 |
220 | V>missing | Global developmental delay [ClinVar] | Yes |
ClinVar dbSNP |
COSM1027661 RCV001550480 RCV001141901 rs200040098 CA9898217 |
232 | R>C | skin endometrium Periventricular heterotopia with microcephaly, autosomal recessive [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000385788 rs140989375 CA9898218 RCV002523161 RCV000500597 |
232 | R>H | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV003139908 RCV000873736 CA9898231 rs150046458 |
257 | R>K | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000432676 RCV000874281 CA230908 rs143570842 RCV000350612 |
271 | P>A | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA10649845 RCV000427962 rs372150935 RCV000388862 |
283 | D>N | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
RCV002541595 RCV001262567 CA9898298 CA409324709 rs756966050 |
339 | G>R | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ExAC TOPMed gnomAD ClinVar dbSNP |
rs886056752 RCV000345138 CA10652607 |
355 | S>L | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV001335417 CA315912018 rs752769332 COSM1412300 |
369 | V>I | large_intestine Variant assessed as Somatic; impact. Periventricular heterotopia with microcephaly, autosomal recessive [Cosmic, NCI-TCGA, ClinVar] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA TOPMed dbSNP |
rs1022300649 CA315913001 RCV001143702 COSM1027669 |
402 | R>C | Variant assessed as Somatic; 0.0 impact. pancreas endometrium Periventricular heterotopia with microcephaly, autosomal recessive [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA dbSNP gnomAD |
CA409326598 CA9898360 RCV001137149 rs777757005 |
414 | V>L | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA9898361 RCV001137150 rs753932082 |
416 | Q>P | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV000339293 CA9898373 rs41296207 RCV001850819 |
432 | I>V | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000990309 rs1600623496 |
498 | M>missing | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinVar dbSNP |
CA9898408 rs771654087 RCV001139383 |
500 | I>V | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA9898431 rs770424682 RCV000260060 |
529 | I>V | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001139385 COSM1412302 CA315915178 rs370911063 |
612 | R>W | large_intestine Periventricular heterotopia with microcephaly, autosomal recessive Variant assessed as Somatic; 4.62e-05 impact. [Cosmic, ClinVar, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar ESP NCI-TCGA TOPMed dbSNP gnomAD |
RCV000726764 RCV000193884 CA207661 rs146772848 RCV000355809 |
630 | V>I | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001142002 rs2091321833 |
716 | D>G | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinVar dbSNP |
CA409304724 COSM1730458 rs1383096323 RCV001142004 |
751 | A>S | liver Periventricular heterotopia with microcephaly, autosomal recessive [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar TOPMed dbSNP gnomAD |
CA9898576 rs368246400 RCV001335419 |
754 | I>V | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000387411 rs886056755 |
763 | F>missing | Periventricular laminar heterotopia [ClinVar] | Yes |
ClinVar dbSNP |
CA9898631 RCV001263382 RCV002537654 rs532986318 |
793 | T>M | Global developmental delay Variant assessed as Somatic; 0.0 impact. Inborn genetic diseases [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs141183045 RCV001251677 RCV001142006 CA9898684 |
853 | R>Q | Intellectual disability Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs1555811929 RCV000504204 |
880 | P>missing | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinVar dbSNP |
RCV000289672 rs886056756 CA10653203 |
944 | Y>F | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV000414382 RCV000346910 rs149644732 CA9898806 RCV002520016 |
1016 | G>R | Periventricular heterotopia with microcephaly, autosomal recessive Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000516387 RCV002527455 rs144322567 CA9898809 |
1019 | R>H | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
CA409312974 rs1568729284 RCV000714542 |
1088 | V>I | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV001819841 RCV001137254 RCV002556918 rs144190029 CA9898893 |
1092 | R>C | Periventricular heterotopia with microcephaly, autosomal recessive Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs151045115 RCV000826999 CA209462 RCV000194953 RCV001137255 |
1092 | R>H | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001251676 rs144190029 |
1092 | R>S | Intellectual disability [ClinVar] | Yes |
ClinVar dbSNP |
RCV001335421 CA9899014 RCV002546732 rs762641248 |
1240 | I>V | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001137258 rs139037316 RCV000710613 RCV001251678 RCV000193054 CA206285 |
1298 | G>S | Intellectual disability Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs771148216 CA9899119 RCV000342283 |
1354 | V>A | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001139512 CA409326257 rs1319305357 |
1407 | Y>N | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV001196577 rs2091529784 |
1424 | L>missing | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinVar dbSNP |
rs200473895 CA9899195 RCV000981683 RCV001140272 |
1449 | N>T | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs756288865 RCV001140273 CA9899196 |
1450 | C>S | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA10644046 RCV000308182 rs886056757 |
1458 | N>S | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
rs151221957 RCV000764248 CA230900 RCV000116406 |
1488 | T>S | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV002520017 CA9899233 rs200763159 RCV000277712 |
1494 | M>V | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
RCV003114499 rs774033935 CA9899249 RCV000332749 |
1509 | R>H | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA9899300 RCV001140274 rs757149873 |
1578 | A>P | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA9899333 RCV002519530 COSM1183339 RCV000430855 rs368410119 |
1597 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine Inborn genetic diseases [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
CA9899377 RCV001507470 RCV000501393 RCV002527198 rs778607741 COSM1245312 |
1675 | R>H | oesophagus Inborn genetic diseases [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000710615 RCV000274139 CA9899383 RCV002520018 RCV000503791 rs145439001 RCV001251675 |
1688 | T>I | Intellectual disability Periventricular heterotopia with microcephaly, autosomal recessive Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs767531219 RCV000319829 CA9899405 |
1702 | S>F | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs201225495 RCV000374455 RCV002520019 CA9899407 |
1706 | R>Q | Periventricular laminar heterotopia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs1380925561 RCV000990310 COSM1734667 CA409340131 |
1752 | R>* | pancreas Periventricular heterotopia with microcephaly, autosomal recessive [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar TOPMed dbSNP |
RCV001142110 rs1321725717 CA409340198 |
1759 | F>L | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA9899443 rs774661656 RCV001142111 |
1762 | I>M | Periventricular heterotopia with microcephaly, autosomal recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs1165050601 CA409308727 |
2 | Q>E | No |
ClinGen TOPMed |
|
rs1276866521 CA409308784 |
3 | E>D | No |
ClinGen gnomAD |
|
rs745849324 CA9898030 |
8 | S>R | No |
ClinGen ExAC gnomAD |
|
rs772040749 CA9898031 |
10 | F>L | No |
ClinGen ExAC gnomAD |
|
rs1466186964 CA409308966 |
10 | F>S | No |
ClinGen gnomAD |
|
CA409308995 rs1209329243 CA409308998 |
11 | V>L | No |
ClinGen gnomAD |
|
CA409309101 rs1050725257 |
14 | A>D | No |
ClinGen TOPMed gnomAD |
|
rs1050725257 CA315881037 |
14 | A>V | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 15 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1156311854 CA409309155 |
17 | K>E | No |
ClinGen gnomAD |
|
rs570402505 CA9898037 |
23 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA409309433 rs1489997119 |
24 | V>A | No |
ClinGen TOPMed |
|
rs368323926 CA9898038 |
24 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1291455096 CA409309472 |
26 | R>G | No |
ClinGen TOPMed |
|
CA409309474 rs1291455096 |
26 | R>W | No |
ClinGen TOPMed |
|
CA230906 RCV000116409 rs587780282 |
27 | P>S | No |
ClinGen ClinVar dbSNP gnomAD |
|
CA409309557 rs1228887850 |
29 | H>Y | No |
ClinGen gnomAD |
|
CA9898041 rs751708790 |
30 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409309649 rs1211420853 |
31 | Q>R | No |
ClinGen gnomAD |
|
CA409309701 rs1482517832 |
33 | R>C | No |
ClinGen gnomAD |
|
CA315881102 rs868644761 |
33 | R>H | No |
ClinGen TOPMed |
|
rs868644761 CA315881119 |
33 | R>L | No |
ClinGen TOPMed |
|
rs866102950 CA315881131 |
35 | A>D | No |
ClinGen Ensembl |
|
rs906585026 RCV000499752 CA315881124 |
35 | A>T | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA315881135 rs892511786 |
37 | Q>H | No |
ClinGen TOPMed gnomAD |
|
rs1253309694 CA409309818 |
37 | Q>R | No |
ClinGen gnomAD |
|
TCGA novel | 38 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409309830 rs1324074758 |
38 | V>M | No |
ClinGen TOPMed |
|
CA9898042 rs755065294 |
39 | A>V | No |
ClinGen ExAC gnomAD |
|
rs1406043421 CA409309857 |
40 | L>F | No |
ClinGen TOPMed |
|
rs759701587 CA9898060 |
41 | D>V | No |
ClinGen ExAC gnomAD |
|
CA315892985 rs931213978 |
43 | I>N | No |
ClinGen TOPMed |
|
CA9898063 rs756329199 |
47 | I>M | No |
ClinGen ExAC gnomAD |
|
rs752815154 CA9898062 |
47 | I>T | No |
ClinGen ExAC gnomAD |
|
rs200905854 CA315893000 |
49 | K>R | No |
ClinGen 1000Genomes |
|
CA409314753 rs1202119114 |
52 | L>P | No |
ClinGen TOPMed |
|
CA209128 RCV000710612 RCV002252043 RCV000194749 rs149471454 |
58 | P>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA9898085 rs754961991 |
60 | A>T | No |
ClinGen ExAC gnomAD |
|
rs777301494 CA9898089 |
63 | I>M | No |
ClinGen ExAC gnomAD |
|
CA9898088 rs201168593 |
63 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898087 rs747639378 |
63 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749005425 CA9898090 |
67 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409315080 rs746211545 |
72 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409315087 rs1317840037 COSM1183335 |
73 | E>K | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA315893489 rs1036945229 |
75 | A>G | No |
ClinGen TOPMed |
|
CA409315139 rs1264128952 |
79 | K>M | No |
ClinGen TOPMed gnomAD |
|
CA409315138 rs1264128952 |
79 | K>R | No |
ClinGen TOPMed gnomAD |
|
CA9898096 rs775999493 |
80 | S>F | No |
ClinGen ExAC gnomAD |
|
rs760685905 CA9898097 |
82 | R>K | No |
ClinGen ExAC gnomAD |
|
rs1045171320 CA315893507 |
86 | T>A | No |
ClinGen TOPMed gnomAD |
|
rs764293660 CA9898098 |
87 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA315893516 rs867461721 |
88 | L>F | No |
ClinGen Ensembl |
|
rs1469342954 CA409315251 |
91 | L>W | No |
ClinGen TOPMed |
|
rs1555808172 CA409317046 RCV000501552 |
95 | I>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs963623819 CA315900140 |
96 | A>G | No |
ClinGen TOPMed |
|
rs1358124572 CA409317053 |
96 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs963623819 CA409317064 |
96 | A>V | No |
ClinGen TOPMed |
|
rs1447888913 CA409317071 |
97 | Y>H | No |
ClinGen TOPMed gnomAD |
|
CA409317066 rs1447888913 |
97 | Y>N | No |
ClinGen TOPMed gnomAD |
|
CA9898125 rs180938877 CA315900181 |
98 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA9898127 rs753420388 |
99 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1216597512 CA409317175 |
102 | G>D | No |
ClinGen gnomAD |
|
rs200124620 CA409317207 |
104 | A>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs200124620 CA9898129 |
104 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs200124620 CA315900214 |
104 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs111612717 CA9898130 |
107 | S>G | No |
ClinGen ExAC gnomAD |
|
CA9898132 rs780511001 |
109 | A>T | No |
ClinGen ExAC gnomAD |
|
rs747316402 CA9898133 |
109 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1284398539 CA409317327 |
112 | K>R | No |
ClinGen TOPMed |
|
rs762961927 CA315900329 |
113 | R>W | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 115 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs748227723 CA9898136 |
116 | D>N | No |
ClinGen ExAC gnomAD |
|
CA409317445 rs1303017676 |
122 | I>T | No |
ClinGen gnomAD |
|
CA9898137 rs769803557 |
123 | C>F | No |
ClinGen ExAC gnomAD |
|
CA315900355 rs769803557 |
123 | C>Y | No |
ClinGen ExAC gnomAD |
|
rs1162667125 CA409317462 |
124 | S>G | No |
ClinGen TOPMed |
|
CA315900360 rs772035972 |
124 | S>I | No |
ClinGen Ensembl |
|
rs201243885 CA315900364 |
129 | P>L | No |
ClinGen 1000Genomes |
|
CA9898138 rs773264259 |
131 | T>A | No |
ClinGen ExAC gnomAD |
|
CA9898139 rs746335162 |
131 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409317568 rs771026485 |
133 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898140 rs771026485 |
133 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1165877089 CA409317593 |
134 | G>E | No |
ClinGen TOPMed |
|
rs1472399577 CA409317610 COSM1713622 |
135 | V>A | skin [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs1433096320 CA409317601 |
135 | V>I | No |
ClinGen gnomAD |
|
rs775402622 CA9898142 |
138 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs1437141829 CA409317976 |
146 | A>T | No |
ClinGen TOPMed |
|
CA409317994 rs1201196534 |
146 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA9898167 rs751110792 |
149 | S>Y | No |
ClinGen ExAC gnomAD |
|
CA9898168 rs754607709 |
151 | H>L | No |
ClinGen ExAC gnomAD |
|
rs754607709 CA9898169 |
151 | H>R | No |
ClinGen ExAC gnomAD |
|
rs1427169926 CA409318201 |
155 | H>R | No |
ClinGen TOPMed |
|
rs756660818 CA9898171 |
155 | H>Y | No |
ClinGen ExAC gnomAD |
|
CA409318248 rs1471473936 |
157 | G>V | No |
ClinGen gnomAD |
|
rs980743787 CA409318283 |
159 | I>L | No |
ClinGen TOPMed gnomAD |
|
CA315901422 rs980743787 |
159 | I>V | No |
ClinGen TOPMed gnomAD |
|
CA9898172 rs778091258 |
162 | T>A | No |
ClinGen ExAC gnomAD |
|
rs1186785899 CA409318379 |
163 | V>M | No |
ClinGen TOPMed |
|
rs926611490 CA315901433 |
164 | R>K | No |
ClinGen gnomAD |
|
rs148230420 CA205639 RCV000192666 RCV001582680 |
165 | T>A | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA9898174 rs779037797 |
165 | T>I | No |
ClinGen ExAC gnomAD |
|
rs1239732393 CA409318492 |
167 | Y>N | No |
ClinGen gnomAD |
|
rs776619240 CA9898177 |
170 | Y>C | No |
ClinGen ExAC gnomAD |
|
rs1212861803 CA409318627 |
172 | A>S | No |
ClinGen TOPMed |
|
CA409318666 rs1464222003 |
173 | S>R | No |
ClinGen gnomAD |
|
rs747905295 CA9898178 |
174 | K>N | No |
ClinGen ExAC gnomAD |
|
rs769886100 CA9898180 |
177 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898181 rs747058589 |
178 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 178 | N>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409318837 rs1335584622 |
179 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA9898182 rs762542334 |
182 | A>G | No |
ClinGen ExAC |
|
rs765860851 CA9898183 |
185 | T>A | No |
ClinGen ExAC gnomAD |
|
CA409319030 rs1309085044 |
192 | V>I | No |
ClinGen TOPMed |
|
TCGA novel | 194 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA315901468 RCV000503337 rs373500218 |
196 | R>C | No |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
|
CA315901462 rs373500218 |
196 | R>G | No |
ClinGen ESP TOPMed gnomAD |
|
COSM159148 rs572333257 CA9898185 |
196 | R>H | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
CA9898186 rs572333257 |
196 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA9898187 rs113464272 |
197 | M>L | No |
ClinGen ExAC gnomAD |
|
CA315901497 rs113464272 |
197 | M>V | No |
ClinGen ExAC gnomAD |
|
CA409319978 rs1165645632 |
198 | E>K | No |
ClinGen gnomAD |
|
rs1386083198 CA409319998 |
199 | N>K | No |
ClinGen gnomAD |
|
rs940545342 CA315901517 |
200 | Q>E | No |
ClinGen TOPMed gnomAD |
|
rs1036270873 CA315901536 |
201 | V>M | No |
ClinGen Ensembl |
|
rs141147462 CA9898211 |
202 | L>W | No |
ClinGen ExAC gnomAD |
|
CA409320104 rs1236307719 |
204 | E>G | No |
ClinGen TOPMed |
|
CA9898212 rs370991401 |
205 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 207 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409320162 rs1210548683 |
210 | K>Q | No |
ClinGen gnomAD |
|
CA409320182 rs1244078899 |
211 | P>Q | No |
ClinGen gnomAD |
|
CA409320188 rs1240328074 |
212 | I>V | No |
ClinGen gnomAD |
|
CA9898214 rs201458210 |
214 | S>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1343537843 CA409320287 |
218 | S>C | No |
ClinGen TOPMed |
|
CA409320350 rs1264139946 |
222 | Q>P | No |
ClinGen gnomAD |
|
CA409320430 rs1420852191 |
225 | A>V | No |
ClinGen TOPMed |
|
rs1429398335 CA409320464 |
228 | P>A | No |
ClinGen gnomAD |
|
COSM1245313 CA9898215 rs780440668 |
229 | K>E | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA9898216 rs751892205 |
230 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs974192671 CA409320537 |
231 | V>F | No |
ClinGen TOPMed gnomAD |
|
COSM1412297 rs974192671 CA315902362 |
231 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
rs140989375 CA9898219 |
232 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA315902387 rs144949006 |
234 | K>N | No |
ClinGen ESP TOPMed gnomAD |
|
CA315902389 rs1017267898 |
236 | S>G | No |
ClinGen TOPMed gnomAD |
|
CA409320657 rs1017267898 |
236 | S>R | No |
ClinGen TOPMed gnomAD |
|
CA9898220 rs149041704 |
238 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1280785872 CA409320724 |
239 | Q>R | No |
ClinGen gnomAD |
|
rs1050288163 CA315902417 |
240 | S>N | No |
ClinGen TOPMed gnomAD |
|
rs745385629 CA9898222 |
243 | T>R | No |
ClinGen ExAC gnomAD |
|
CA315902456 rs560977605 |
243 | T>S | No |
ClinGen Ensembl |
|
rs774976613 CA9898224 |
246 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA315902465 rs956169696 |
246 | E>V | No |
ClinGen TOPMed |
|
CA9898225 rs760361370 |
247 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1486298082 CA409320999 |
249 | D>G | No |
ClinGen TOPMed gnomAD |
|
rs1486298082 CA409321000 |
249 | D>V | No |
ClinGen TOPMed gnomAD |
|
rs114729625 RCV000116408 CA230904 |
252 | N>K | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA9898227 rs776884400 |
252 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1345176351 CA409321085 |
253 | G>A | No |
ClinGen gnomAD |
|
CA9898229 rs754473579 |
253 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1411135757 CA409321094 |
254 | E>Q | No |
ClinGen gnomAD |
|
rs750906284 CA9898230 |
255 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409321145 rs1160983349 |
256 | A>S | No |
ClinGen gnomAD |
|
rs1345624164 CA409321158 |
256 | A>V | No |
ClinGen gnomAD |
|
rs767149566 CA315902544 |
258 | S>N | No |
ClinGen Ensembl |
|
rs755201684 CA9898234 |
264 | S>N | No |
ClinGen ExAC gnomAD |
|
rs781424305 CA9898235 |
265 | T>I | No |
ClinGen ExAC |
|
rs145245951 CA9898236 |
269 | D>G | No |
ClinGen ESP ExAC gnomAD |
|
CA209095 COSM1027665 rs778834589 RCV000194727 |
270 | A>T | large_intestine endometrium Variant assessed as Somatic; 4.62e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA dbSNP gnomAD |
rs143570842 CA9898237 |
271 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA315902571 rs1043533503 |
272 | R>G | No |
ClinGen TOPMed gnomAD |
|
rs375582617 CA9898238 |
272 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA409321380 rs1289865175 |
272 | R>S | No |
ClinGen gnomAD |
|
rs746481367 CA9898239 |
273 | E>Q | No |
ClinGen ExAC gnomAD |
|
CA9898240 rs533047547 |
275 | G>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
TCGA novel | 275 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA315902588 rs533047547 |
275 | G>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA409321461 rs1283637181 |
277 | S>P | No |
ClinGen gnomAD |
|
rs368886420 RCV000503367 CA9898261 RCV001851400 |
282 | D>E | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs571231961 CA9898263 |
284 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA9898264 rs774856463 |
288 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs759549446 CA9898265 |
292 | I>V | No |
ClinGen ExAC gnomAD |
|
rs767695533 CA9898266 |
295 | D>H | No |
ClinGen ExAC gnomAD |
|
rs1359889136 CA409323328 |
297 | V>D | No |
ClinGen gnomAD |
|
RCV000192740 rs797045260 CA205766 |
300 | A>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA409323351 rs1273885456 |
300 | A>V | No |
ClinGen gnomAD |
|
rs1264717154 CA409323365 |
301 | I>T | No |
ClinGen gnomAD |
|
rs1201743076 CA409323356 |
301 | I>V | No |
ClinGen gnomAD |
|
CA409323377 rs1600615413 |
302 | K>R | No |
ClinGen Ensembl |
|
CA9898267 rs775427871 |
303 | E>Q | No |
ClinGen ExAC gnomAD |
|
CA409324101 rs1402617814 |
305 | A>V | No |
ClinGen TOPMed gnomAD |
|
rs772436231 CA9898284 |
306 | E>D | No |
ClinGen ExAC gnomAD |
|
CA315910470 rs989708411 |
306 | E>G | No |
ClinGen TOPMed gnomAD |
|
CA409324102 rs1364963057 |
306 | E>K | No |
ClinGen gnomAD |
|
CA9898286 rs760704756 |
309 | G>S | No |
ClinGen ExAC gnomAD |
|
CA9898287 rs768868961 |
309 | G>V | No |
ClinGen ExAC gnomAD |
|
CA9898288 rs200834017 |
310 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 311 | T>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9898290 rs762006750 |
313 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762006750 CA9898291 |
313 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762006750 CA9898289 |
313 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409324236 rs1290598848 |
315 | R>I | No |
ClinGen TOPMed gnomAD |
|
rs1015138690 CA315910482 |
315 | R>S | No |
ClinGen Ensembl |
|
rs1489753687 CA409324270 |
318 | G>S | No |
ClinGen TOPMed gnomAD |
|
rs1057523412 RCV000422521 CA16608450 |
319 | E>K | No |
ClinGen ClinVar dbSNP gnomAD |
|
TCGA novel | 320 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 326 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9898292 rs759571450 |
326 | A>V | No |
ClinGen ExAC gnomAD |
|
CA409324433 rs767312168 |
327 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA315910515 rs201897249 |
327 | I>T | No |
ClinGen 1000Genomes TOPMed |
|
CA9898293 rs767312168 |
327 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898294 rs752285808 |
328 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs752285808 CA409324443 |
328 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409324458 rs1173049625 |
329 | P>A | No |
ClinGen TOPMed |
|
CA409324464 rs1228845330 |
329 | P>L | No |
ClinGen gnomAD |
|
rs1600617295 CA409324576 |
334 | N>T | No |
ClinGen Ensembl |
|
CA409324610 rs1159411415 |
335 | S>L | No |
ClinGen gnomAD |
|
rs201523904 CA9898297 |
338 | N>K | No |
ClinGen ExAC gnomAD |
|
CA409324677 rs1384826807 |
338 | N>S | No |
ClinGen gnomAD |
|
rs1391576883 CA409324720 |
339 | G>E | No |
ClinGen gnomAD |
|
TCGA novel | 340 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1326779899 CA409324735 |
340 | I>V | No |
ClinGen gnomAD |
|
rs530413492 CA409324778 |
342 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs530413492 CA9898302 |
342 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA315910553 rs927935633 |
344 | R>K | No |
ClinGen TOPMed |
|
rs1356788227 CA409324879 |
345 | Q>K | No |
ClinGen TOPMed gnomAD |
|
CA9898304 rs768779186 |
347 | L>V | No |
ClinGen ExAC gnomAD |
|
rs373673423 CA9898306 |
348 | S>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1195662727 CA409324971 |
348 | S>L | No |
ClinGen TOPMed gnomAD |
|
rs373673423 CA9898307 |
348 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1568711938 CA409325459 |
356 | D>N | No |
ClinGen Ensembl |
|
rs1568711950 CA409325479 |
358 | Q>K | No |
ClinGen Ensembl |
|
CA9898333 rs776311839 |
359 | G>R | No |
ClinGen ExAC gnomAD |
|
CA409325505 rs1403542773 |
360 | H>P | No |
ClinGen gnomAD |
|
CA9898334 rs761161448 |
364 | A>G | No |
ClinGen ExAC gnomAD |
|
rs1600620368 CA409325576 |
366 | F>V | No |
ClinGen Ensembl |
|
TCGA novel | 371 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 374 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1219716469 CA409325733 |
378 | F>C | No |
ClinGen gnomAD |
|
CA315912021 rs756248801 |
378 | F>L | No |
ClinGen TOPMed gnomAD |
|
CA9898337 rs758062147 |
379 | R>C | No |
ClinGen ExAC gnomAD |
|
CA409325745 COSM373828 rs1568712014 |
379 | R>H | lung large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
rs1256995975 CA409325756 |
381 | L>M | No |
ClinGen TOPMed gnomAD |
|
rs1263894229 CA409325831 |
387 | K>I | No |
ClinGen gnomAD |
|
CA9898341 rs781638690 |
388 | P>T | No |
ClinGen ExAC gnomAD |
|
CA409325975 rs1198528025 |
389 | L>F | No |
ClinGen gnomAD |
|
CA409326004 rs1293643539 |
392 | G>S | No |
ClinGen TOPMed |
|
CA409326020 rs1427097424 |
393 | P>L | No |
ClinGen gnomAD |
|
CA315912026 rs557395705 |
394 | P>S | No |
ClinGen gnomAD |
|
CA409326381 rs1423651155 |
401 | L>R | No |
ClinGen gnomAD |
|
COSM1412301 CA9898354 rs762557818 |
402 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA9898355 rs765964346 |
403 | S>F | No |
ClinGen ExAC gnomAD |
|
CA315913009 rs970042155 |
406 | V>L | No |
ClinGen gnomAD |
|
CA409326511 rs1354641323 |
408 | L>Q | No |
ClinGen gnomAD |
|
CA315913023 rs768040314 |
412 | L>F | No |
ClinGen gnomAD |
|
CA315913019 rs768040314 |
412 | L>V | No |
ClinGen gnomAD |
|
rs1238614423 CA409326681 |
419 | G>A | No |
ClinGen gnomAD |
|
CA409326687 rs1240723813 |
420 | P>S | No |
ClinGen gnomAD |
|
CA9898365 rs768627578 |
421 | V>E | No |
ClinGen ExAC gnomAD |
|
COSM189780 rs746814084 CA9898364 |
421 | V>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA9898367 rs117131028 CA409326784 |
425 | H>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA9898366 rs781129285 |
425 | H>Y | No |
ClinGen ExAC gnomAD |
|
CA9898368 rs566630105 |
426 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
CA9898369 rs566630105 |
426 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs534091799 CA9898370 |
427 | M>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA409326859 rs1458193846 |
430 | N>D | No |
ClinGen TOPMed |
|
rs773939256 CA9898371 |
430 | N>K | No |
ClinGen ExAC gnomAD |
|
rs373419435 RCV000428564 CA16607990 |
430 | N>S | No |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
|
CA9898372 rs375799646 |
431 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs753076476 CA9898374 |
433 | K>R | No |
ClinGen ExAC gnomAD |
|
CA9898375 rs761137115 |
442 | K>R | No |
ClinGen ExAC gnomAD |
|
CA9898377 rs753867046 |
444 | G>S | No |
ClinGen ExAC gnomAD |
|
CA409327132 rs150152511 |
445 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA9898379 rs150152511 |
445 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs199503521 CA315913133 |
449 | P>L | No |
ClinGen Ensembl |
|
CA409327223 rs758659383 |
450 | D>G | No |
ClinGen ExAC gnomAD |
|
rs758659383 CA9898381 |
450 | D>V | No |
ClinGen ExAC gnomAD |
|
rs780896724 CA9898382 |
451 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1185399485 CA409327256 |
452 | F>V | No |
ClinGen gnomAD |
|
rs1323241237 CA409327302 |
454 | L>R | No |
ClinGen TOPMed |
|
CA315913161 rs1025249321 |
455 | S>C | No |
ClinGen TOPMed |
|
CA409327719 rs747769286 COSM4134618 |
458 | I>F | thyroid [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA315913178 rs747769286 |
458 | I>V | No |
ClinGen TOPMed |
|
TCGA novel | 459 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409327786 rs1418766438 |
460 | L>V | No |
ClinGen TOPMed |
|
CA9898384 rs570757258 |
461 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA409327843 rs1401393228 |
463 | L>F | No |
ClinGen TOPMed gnomAD |
|
CA409327850 rs1401393228 |
463 | L>V | No |
ClinGen TOPMed gnomAD |
|
CA9898386 rs748765878 |
465 | N>I | No |
ClinGen ExAC gnomAD |
|
rs1334789137 CA409327890 |
465 | N>K | No |
ClinGen gnomAD |
|
CA409327943 rs1196396744 |
467 | K>N | No |
ClinGen TOPMed |
|
rs773851044 CA9898387 |
467 | K>Q | No |
ClinGen ExAC gnomAD |
|
CA9898388 rs759227223 |
468 | M>V | No |
ClinGen ExAC gnomAD |
|
rs1600622536 CA409327982 |
469 | H>N | No |
ClinGen Ensembl |
|
TCGA novel | 472 | M>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 479 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs544862151 CA315913710 |
480 | E>K | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
CA409328494 rs1276344205 |
483 | L>M | No |
ClinGen gnomAD |
|
rs1281713053 CA409328600 |
488 | T>A | No |
ClinGen gnomAD |
|
CA409328625 rs1216665703 |
489 | S>* | No |
ClinGen gnomAD |
|
CA9898405 rs757158875 |
490 | T>A | No |
ClinGen ExAC gnomAD |
|
rs1367064251 CA409328682 |
492 | S>F | No |
ClinGen TOPMed |
|
CA409328713 rs1490315656 |
493 | F>S | No |
ClinGen gnomAD |
|
CA409328735 rs1197415440 |
494 | E>G | No |
ClinGen gnomAD |
|
CA9898406 rs147345525 |
496 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
CA315913711 rs937477163 |
496 | R>S | No |
ClinGen Ensembl |
|
rs1418594302 CA409328796 |
497 | W>* | No |
ClinGen TOPMed |
|
rs368352338 CA315913713 |
498 | M>I | No |
ClinGen ESP TOPMed |
|
rs1160200211 CA409328899 |
501 | Q>H | No |
ClinGen TOPMed |
|
rs1378690091 CA409328912 |
502 | T>S | No |
ClinGen gnomAD |
|
CA409328947 rs1159302019 |
504 | T>M | No |
ClinGen gnomAD |
|
CA409328944 rs1159302019 |
504 | T>R | No |
ClinGen gnomAD |
|
CA315914064 rs143277734 |
510 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
RCV000500189 rs143277734 CA9898424 |
510 | A>V | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1182878781 CA409329264 |
512 | C>R | No |
ClinGen TOPMed |
|
TCGA novel | 516 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs779424947 CA9898426 |
517 | Y>F | No |
ClinGen ExAC gnomAD |
|
rs779424947 CA409329374 |
517 | Y>S | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 518 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA315914076 rs945870249 |
519 | N>K | No |
ClinGen Ensembl |
|
CA315914080 rs112869617 |
521 | D>G | No |
ClinGen Ensembl |
|
CA9898427 rs746712724 |
525 | N>D | No |
ClinGen ExAC gnomAD |
|
CA9898428 rs768170821 COSM3939391 |
525 | N>S | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA9898429 rs777154927 |
526 | A>V | No |
ClinGen ExAC gnomAD |
|
rs1322615138 CA409329575 |
527 | A>T | No |
ClinGen TOPMed gnomAD |
|
VAR_028750 CA9898430 rs6063343 |
527 | A>V | No |
ClinGen UniProt ExAC dbSNP gnomAD |
|
rs371569595 CA9898432 |
529 | I>M | No |
ClinGen ESP ExAC gnomAD |
|
TCGA novel | 530 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA315914083 rs867291488 |
533 | L>F | No |
ClinGen Ensembl |
|
rs1204077422 CA409329709 |
534 | V>L | No |
ClinGen TOPMed |
|
rs986288018 CA315914089 |
535 | N>S | No |
ClinGen TOPMed |
|
rs1256511682 CA409329801 |
538 | S>P | No |
ClinGen gnomAD |
|
rs771113041 CA9898434 |
539 | K>E | No |
ClinGen ExAC gnomAD |
|
rs1199443037 CA409329858 |
541 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA315914094 rs747608353 |
545 | S>N | No |
ClinGen Ensembl |
|
rs759855002 CA9898436 |
547 | H>R | No |
ClinGen ExAC gnomAD |
|
CA315914104 rs148597936 |
551 | M>V | No |
ClinGen ESP TOPMed |
|
CA9898437 rs776706357 |
552 | T>I | No |
ClinGen ExAC gnomAD |
|
rs765174402 CA9898439 |
555 | Q>* | No |
ClinGen ExAC gnomAD |
|
CA409330306 rs1568715498 |
557 | L>F | No |
ClinGen Ensembl |
|
CA409330337 rs1303066501 |
560 | R>M | No |
ClinGen gnomAD |
|
rs1322367764 CA409330413 |
565 | E>A | No |
ClinGen gnomAD |
|
CA9898451 rs774513004 |
566 | C>G | No |
ClinGen ExAC |
|
rs1555810703 CA409330474 RCV000502448 |
568 | V>M | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1342900252 CA409330540 |
572 | K>N | No |
ClinGen gnomAD |
|
rs1299569776 CA409330537 |
572 | K>R | No |
ClinGen gnomAD |
|
CA9898453 rs772288924 |
574 | M>V | No |
ClinGen ExAC gnomAD |
|
CA409330599 rs1471441093 |
575 | V>A | No |
ClinGen TOPMed |
|
CA9898454 rs775633250 |
581 | L>P | No |
ClinGen ExAC gnomAD |
|
rs1235624378 CA409330750 |
581 | L>V | No |
ClinGen gnomAD |
|
CA315914720 rs1011689601 |
584 | N>S | No |
ClinGen TOPMed |
|
CA409330898 rs1488096399 |
589 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs750196541 CA9898457 |
590 | S>G | No |
ClinGen ExAC gnomAD |
|
rs375607415 CA315915167 |
592 | G>A | No |
ClinGen ESP TOPMed gnomAD |
|
rs375607415 CA409331641 |
592 | G>D | No |
ClinGen ESP TOPMed gnomAD |
|
CA9898480 rs774210100 |
593 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs759544514 CA9898481 |
594 | E>G | No |
ClinGen ExAC gnomAD |
|
CA9898483 rs752237361 |
597 | T>M | No |
ClinGen ExAC gnomAD |
|
rs763800092 CA9898485 |
600 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409331780 rs1222258036 |
601 | I>T | No |
ClinGen gnomAD |
|
TCGA novel | 602 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409331814 rs1600626622 |
603 | D>G | No |
ClinGen Ensembl |
|
CA409331803 rs1278784060 |
603 | D>N | No |
ClinGen TOPMed |
|
CA9898487 rs757508758 |
604 | G>A | No |
ClinGen ExAC gnomAD |
|
CA409331838 rs1568716295 |
605 | K>R | No |
ClinGen Ensembl |
|
CA9898488 rs202211324 |
608 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898489 rs202211324 |
608 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1297321207 CA409331893 |
609 | M>I | No |
ClinGen TOPMed |
|
CA9898490 rs758879263 |
611 | R>G | No |
ClinGen ExAC gnomAD |
|
CA9898491 rs780130369 |
612 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA409331960 rs1162647954 |
613 | C>R | No |
ClinGen Ensembl |
|
rs201912963 CA9898492 |
613 | C>Y | No |
ClinGen ExAC gnomAD |
|
CA9898493 rs768867078 |
614 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898494 rs372837655 |
615 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA9898495 rs748386696 |
616 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898496 rs770695413 |
617 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898497 rs774168472 |
618 | M>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 619 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9898499 rs759599298 |
620 | S>F | No |
ClinGen ExAC gnomAD |
|
rs1308531502 CA409332187 |
622 | V>G | No |
ClinGen gnomAD |
|
CA409332162 rs1389257605 |
622 | V>L | No |
ClinGen TOPMed |
|
CA315915196 rs139739377 |
623 | S>C | No |
ClinGen ESP TOPMed gnomAD |
|
CA9898502 rs760196945 |
624 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1238631497 CA409332358 |
628 | T>K | No |
ClinGen TOPMed gnomAD |
|
rs143717062 CA9898504 |
629 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA409332383 rs1192370390 |
629 | T>S | No |
ClinGen gnomAD |
|
rs900228147 CA315915207 |
631 | Q>K | No |
ClinGen TOPMed gnomAD |
|
rs1173241627 CA409332523 |
633 | D>E | No |
ClinGen gnomAD |
|
rs765568489 CA409332532 |
634 | P>A | No |
ClinGen ExAC gnomAD |
|
rs765568489 CA9898505 |
634 | P>S | No |
ClinGen ExAC gnomAD |
|
rs758934579 CA9898507 |
636 | Q>* | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 637 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9898508 rs780468795 |
641 | K>R | No |
ClinGen ExAC gnomAD |
|
CA9898509 rs747100936 |
643 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1227456402 CA409332856 |
646 | I>N | No |
ClinGen TOPMed |
|
rs1297707139 CA409332849 |
646 | I>V | No |
ClinGen TOPMed gnomAD |
|
CA315915219 rs377388128 |
647 | I>V | No |
ClinGen ESP TOPMed |
|
rs1314191280 CA409332949 |
649 | H>R | No |
ClinGen TOPMed |
|
rs201921329 CA9898511 |
650 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA409332984 rs1278566295 |
651 | I>V | No |
ClinGen gnomAD |
|
CA409333026 rs1217052185 |
652 | E>K | No |
ClinGen TOPMed gnomAD |
|
rs777989316 CA9898531 |
655 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs745672474 CA9898532 |
656 | K>R | No |
ClinGen ExAC gnomAD |
|
CA315880076 rs1043554079 |
657 | K>R | No |
ClinGen TOPMed gnomAD |
|
rs772051446 RCV000194901 CA209372 |
660 | R>K | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs772051446 CA9898533 |
660 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 662 | I>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 662 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1403580482 CA409303891 |
663 | Q>H | No |
ClinGen gnomAD |
|
rs1325223579 CA409303923 |
666 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
TCGA novel | 669 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs144227832 RCV000430175 CA315880099 CA9898536 |
670 | M>I | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA206109 rs373933885 RCV000991544 RCV000192944 |
672 | G>E | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA9898537 rs761318717 |
673 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409304025 rs761318717 |
673 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs762586847 CA9898540 |
675 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs772904648 CA409304045 |
675 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs772904648 CA9898539 |
675 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA315880127 rs902848348 COSM443980 |
676 | E>K | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
CA409304072 rs1292390703 |
677 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
TCGA novel | 678 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA315880134 rs896448750 |
679 | A>T | No |
ClinGen Ensembl |
|
CA409304113 rs1469198321 |
680 | Q>H | No |
ClinGen gnomAD |
|
TCGA novel | 684 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA315880140 rs549850854 |
684 | Q>R | No |
ClinGen Ensembl |
|
TCGA novel | 686 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1468708775 CA409304234 |
689 | D>A | No |
ClinGen TOPMed |
|
rs759881622 CA9898561 |
695 | D>N | No |
ClinGen ExAC gnomAD |
|
rs1378274144 CA409304370 |
699 | D>E | No |
ClinGen TOPMed |
|
CA409304364 rs1241350993 |
699 | D>N | No |
ClinGen TOPMed |
|
CA409304376 rs767927598 |
700 | S>N | No |
ClinGen ExAC gnomAD |
|
rs767927598 CA9898562 |
700 | S>T | No |
ClinGen ExAC gnomAD |
|
rs201298117 CA315880628 |
701 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA9898564 RCV001288788 rs201298117 |
701 | A>T | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA409304383 rs1276653314 |
702 | R>G | No |
ClinGen gnomAD |
|
CA16608379 RCV000428512 rs1057522261 |
702 | R>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
TCGA novel | 702 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs764311308 CA409304401 |
704 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898565 rs764311308 |
704 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409304417 CA9898567 rs202169231 |
706 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs753947672 CA9898566 |
706 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 706 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409304441 rs1181657882 |
710 | A>T | No |
ClinGen gnomAD |
|
CA409304455 rs965578352 |
712 | V>L | No |
ClinGen TOPMed gnomAD |
|
CA315880661 rs965578352 |
712 | V>M | No |
ClinGen TOPMed gnomAD |
|
rs375953627 CA315880667 |
718 | C>R | No |
ClinGen ESP |
|
CA409304537 rs1394371928 |
723 | V>I | No |
ClinGen TOPMed |
|
rs1191428579 CA409304562 |
727 | R>Q | No |
ClinGen TOPMed gnomAD |
|
rs748153736 CA9898572 |
731 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1034727363 CA315880691 |
734 | R>C | No |
ClinGen gnomAD |
|
rs1375537095 CA409304607 |
734 | R>H | No |
ClinGen TOPMed gnomAD |
|
CA409304655 rs1352414182 |
741 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA9898574 rs777290585 |
744 | R>L | No |
ClinGen ExAC gnomAD |
|
CA409304674 rs777290585 |
744 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA409304685 rs1296900936 |
746 | M>V | No |
ClinGen gnomAD |
|
TCGA novel | 749 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs542066920 CA9898577 |
754 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs772555441 CA9898578 |
758 | Q>E | No |
ClinGen ExAC gnomAD |
|
rs775687427 CA9898579 |
759 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898603 rs763256205 |
760 | Q>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs1284693747 CA409305057 |
764 | A>T | No |
ClinGen TOPMed |
|
rs752544916 CA409305075 |
765 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs752544916 CA9898605 |
765 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1600636494 CA409305115 |
768 | T>S | No |
ClinGen Ensembl |
|
COSM577863 CA409305153 rs1367236691 |
771 | V>F | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
rs562272956 CA9898608 |
773 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
COSM189792 CA9898607 rs562272956 |
773 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
rs778535298 CA9898610 |
777 | I>V | No |
ClinGen ExAC gnomAD |
|
CA9898611 rs749854332 |
779 | L>P | No |
ClinGen ExAC gnomAD |
|
rs1242482253 CA409305273 |
781 | T>P | No |
ClinGen gnomAD |
|
CA409305292 rs1227615565 |
782 | D>A | No |
ClinGen gnomAD |
|
TCGA novel | 789 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs373814309 CA9898630 |
789 | K>R | No |
ClinGen ESP ExAC gnomAD |
|
TCGA novel | 790 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1600636656 CA409305449 |
790 | N>S | No |
ClinGen Ensembl |
|
VAR_036156 | 794 | K>E | a breast cancer sample; somatic mutation [UniProt] | No | UniProt |
rs550947400 CA9898633 |
795 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
TCGA novel | 796 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs377485352 CA9898634 |
798 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
CA9898635 rs754655353 |
799 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898636 rs781706750 |
801 | N>S | No |
ClinGen ExAC gnomAD |
|
VAR_069404 CA9898637 rs748482139 |
802 | R>Q | No |
ClinGen UniProt ExAC dbSNP gnomAD |
|
CA409305624 rs1390031598 COSM1027687 |
802 | R>W | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs1600636701 CA920226647 |
803 | G>* | No |
ClinGen Ensembl |
|
CA9898639 rs371043044 |
803 | G>C | No |
ClinGen ESP ExAC gnomAD |
|
CA409305655 rs1474622939 |
805 | N>I | No |
ClinGen gnomAD |
|
CA409305657 rs1474622939 |
805 | N>S | No |
ClinGen gnomAD |
|
rs975042360 CA315882776 |
806 | D>Y | No |
ClinGen TOPMed |
|
rs770983635 CA9898641 |
808 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1377360405 CA409305716 |
811 | P>L | No |
ClinGen gnomAD |
|
rs746141031 CA9898643 |
812 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs774388240 CA9898642 |
812 | E>G | No |
ClinGen ExAC gnomAD |
|
rs1568723678 CA409305747 |
814 | Y>C | No |
ClinGen Ensembl |
|
CA315882820 rs1047816435 |
819 | Y>C | No |
ClinGen TOPMed gnomAD |
|
rs1217152049 CA409305820 |
820 | E>D | No |
ClinGen TOPMed gnomAD |
|
rs1600636781 CA409305855 |
824 | G>C | No |
ClinGen Ensembl |
|
rs1470002981 CA409305887 |
828 | A>V | No |
ClinGen TOPMed |
|
CA409305928 rs1600636793 |
833 | K>E | No |
ClinGen Ensembl |
|
rs773087244 CA9898648 |
834 | E>D | No |
ClinGen ExAC gnomAD |
|
rs201993253 CA9898650 |
836 | T>M | No |
ClinGen ExAC gnomAD |
|
CA9898653 rs767210670 |
839 | T>A | No |
ClinGen ExAC gnomAD |
|
rs200061894 CA315882860 |
839 | T>I | No |
ClinGen gnomAD |
|
rs200061894 CA409305993 |
839 | T>S | No |
ClinGen gnomAD |
|
rs778195883 CA9898656 |
844 | Q>E | No |
ClinGen ExAC gnomAD |
|
CA409306050 rs1167773290 |
844 | Q>H | No |
ClinGen TOPMed |
|
rs375786927 CA9898681 |
848 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1038146807 CA315883590 |
852 | R>Q | No |
ClinGen TOPMed gnomAD |
|
rs1335667047 CA409306183 |
852 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs777458673 CA9898685 |
857 | N>D | No |
ClinGen ExAC gnomAD |
|
rs749044574 CA9898686 |
858 | L>F | No |
ClinGen ExAC gnomAD |
|
rs1166766265 CA409306259 |
860 | M>V | No |
ClinGen gnomAD |
|
TCGA novel | 861 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9898688 rs774489732 |
863 | M>I | No |
ClinGen ExAC gnomAD |
|
CA9898689 rs759544117 |
864 | A>S | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 864 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409306345 rs1398266161 |
865 | K>E | No |
ClinGen gnomAD |
|
CA315883605 rs866758540 |
866 | T>K | No |
ClinGen Ensembl |
|
CA9898690 rs771749116 |
867 | A>S | No |
ClinGen ExAC gnomAD |
|
CA315883619 rs1011123963 |
871 | M>L | No |
ClinGen Ensembl |
|
rs1355324857 CA409306574 |
878 | K>N | No |
ClinGen gnomAD |
|
TCGA novel | 879 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV000116392 CA230892 rs183852730 |
880 | P>L | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1023565403 CA315883625 |
880 | P>S | No |
ClinGen TOPMed |
|
TCGA novel | 882 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs762109752 CA9898694 |
886 | H>N | No |
ClinGen ExAC gnomAD |
|
CA409306692 rs201685748 |
886 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA409306676 rs1249833286 |
886 | H>R | No |
ClinGen gnomAD |
|
CA409306755 rs1278034398 |
890 | V>A | No |
ClinGen gnomAD |
|
rs1484627377 CA409306760 |
891 | R>W | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs750966122 CA9898696 |
893 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA315883677 rs1010372982 |
895 | K>R | No |
ClinGen TOPMed |
|
CA9898721 rs778874771 |
899 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898723 rs745621774 |
899 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA9898722 rs745621774 |
899 | T>R | No |
ClinGen ExAC gnomAD |
|
CA315883898 rs778874771 |
899 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 900 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 901 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 903 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1174925065 CA409307004 |
904 | A>T | No |
ClinGen gnomAD |
|
CA409307019 rs1236557851 |
906 | S>G | No |
ClinGen gnomAD |
|
rs768250101 CA9898726 |
908 | G>R | No |
ClinGen ExAC gnomAD |
|
rs1250723835 CA409307228 |
920 | L>S | No |
ClinGen gnomAD |
|
rs1600637612 CA409307322 |
925 | I>T | No |
ClinGen Ensembl |
|
rs1320731501 CA409307313 |
925 | I>V | No |
ClinGen TOPMed |
|
CA9898730 rs773569365 |
926 | R>G | No |
ClinGen ExAC gnomAD |
|
COSM3423704 rs763245062 CA9898731 RCV000437482 |
926 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs766636734 CA9898732 |
927 | C>S | No |
ClinGen ExAC gnomAD |
|
CA409307345 rs1157539723 |
927 | C>Y | No |
ClinGen gnomAD |
|
rs546454517 CA9898733 |
929 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA9898734 rs200505747 |
930 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs571537729 CA9898735 |
931 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA409307431 rs199594681 |
932 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs199594681 CA9898737 |
932 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1326579827 CA409307439 |
932 | A>V | No |
ClinGen gnomAD |
|
rs750753933 CA9898738 |
933 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750753933 CA315883981 |
933 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1309058613 CA409307466 |
934 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA409307497 rs1232437536 |
936 | G>R | No |
ClinGen gnomAD |
|
rs1184727853 CA409307512 |
938 | Q>K | No |
ClinGen TOPMed |
|
rs754943500 CA9898759 |
940 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 941 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1600638623 CA409308136 COSM1681742 |
941 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated Ensembl |
rs377633144 CA315884982 |
942 | D>G | No |
ClinGen Ensembl |
|
TCGA novel | 942 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9898760 rs781049193 |
943 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1426987955 CA409308174 |
947 | A>S | No |
ClinGen gnomAD |
|
rs1172573484 CA409308177 |
947 | A>V | No |
ClinGen gnomAD |
|
TCGA novel | 948 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1027395503 CA315885003 |
949 | A>S | No |
ClinGen Ensembl |
|
rs1355193386 COSM1412307 CA409308188 |
949 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs912572475 CA315885015 |
950 | R>C | No |
ClinGen Ensembl |
|
rs1351076874 CA409308191 |
950 | R>H | No |
ClinGen TOPMed |
|
rs1415147091 CA409308215 |
954 | L>F | No |
ClinGen gnomAD |
|
CA409308222 rs1282599289 |
955 | T>I | No |
ClinGen TOPMed |
|
CA315885031 rs953710086 |
955 | T>P | No |
ClinGen Ensembl |
|
CA409308232 rs1269398189 |
957 | S>C | No |
ClinGen gnomAD |
|
CA9898764 rs749020227 |
960 | I>V | No |
ClinGen ExAC gnomAD |
|
CA409308267 rs1392618389 |
962 | E>G | No |
ClinGen TOPMed |
|
CA315885040 rs748951554 |
963 | M>V | No |
ClinGen Ensembl |
|
rs944092192 CA315885048 |
969 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA409308335 rs1486971422 |
971 | I>T | No |
ClinGen gnomAD |
|
CA9898767 rs746156078 |
971 | I>V | No |
ClinGen ExAC gnomAD |
|
CA9898768 rs772651428 |
973 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs536501506 CA9898770 |
974 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1413276546 CA409308356 |
975 | I>F | No |
ClinGen TOPMed |
|
rs1188522339 CA409308361 |
975 | I>S | No |
ClinGen gnomAD |
|
CA9898772 rs776800819 |
977 | V>A | No |
ClinGen ExAC gnomAD |
|
rs1171903040 CA409308382 |
979 | H>Y | No |
ClinGen gnomAD |
|
CA9898774 rs765305868 |
981 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1317287644 CA409308404 |
982 | G>D | No |
ClinGen gnomAD |
|
CA315885123 rs778887352 |
984 | Y>H | No |
ClinGen Ensembl |
|
rs1040256261 CA315885132 |
988 | S>F | No |
ClinGen TOPMed |
|
CA409308453 rs1343225349 |
989 | W>* | No |
ClinGen gnomAD |
|
rs1289080009 CA409308460 |
990 | H>L | No |
ClinGen gnomAD |
|
CA409308456 rs1432703559 |
990 | H>Y | No |
ClinGen gnomAD |
|
TCGA novel | 995 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1016255824 CA315887652 |
996 | I>V | No |
ClinGen TOPMed gnomAD |
|
rs184784782 CA315887657 |
998 | Q>L | No |
ClinGen 1000Genomes |
|
rs1416907001 CA409310260 |
1002 | A>S | No |
ClinGen gnomAD |
|
CA409310262 rs1416907001 |
1002 | A>T | No |
ClinGen gnomAD |
|
CA409310330 rs1192390709 |
1007 | T>N | No |
ClinGen TOPMed |
|
rs763952872 CA9898798 |
1008 | G>A | No |
ClinGen ExAC gnomAD |
|
rs763952872 CA409310346 |
1008 | G>D | No |
ClinGen ExAC gnomAD |
|
CA315887705 rs923421906 RCV000502161 |
1008 | G>S | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1326305342 CA409310348 |
1009 | V>L | No |
ClinGen gnomAD |
|
CA9898800 rs756780073 |
1011 | T>A | No |
ClinGen ExAC gnomAD |
|
rs138319848 CA9898801 |
1011 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
rs138319848 CA409310374 |
1011 | T>R | No |
ClinGen ESP ExAC gnomAD |
|
rs758071330 CA409310382 |
1012 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM1732237 rs780594033 CA9898804 |
1012 | R>H | bone [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs758071330 CA9898803 |
1012 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1357379635 CA409310393 |
1013 | Y>C | No |
ClinGen gnomAD |
|
rs1357379635 CA409310397 |
1013 | Y>F | No |
ClinGen gnomAD |
|
rs1205806370 CA409310443 |
1017 | S>C | No |
ClinGen gnomAD |
|
TCGA novel | 1017 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA315887793 rs748682883 |
1019 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs748682883 CA9898808 |
1019 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773319245 CA9898810 |
1022 | E>K | No |
ClinGen ExAC gnomAD |
|
rs749536127 CA9898811 |
1023 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1361898202 CA409310526 |
1024 | S>T | No |
ClinGen TOPMed |
|
CA9898813 rs775271126 |
1027 | G>C | No |
ClinGen ExAC gnomAD |
|
CA409310552 rs1429895835 |
1027 | G>D | No |
ClinGen gnomAD |
|
rs760406286 CA9898814 |
1029 | T>P | No |
ClinGen ExAC gnomAD |
|
rs1244186676 CA409310568 |
1030 | L>M | No |
ClinGen gnomAD |
|
CA409310577 rs1336585074 |
1031 | A>S | No |
ClinGen TOPMed gnomAD |
|
rs1336585074 CA409310575 |
1031 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs569633405 CA9898817 |
1033 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1600641125 CA409310604 |
1035 | F>V | No |
ClinGen Ensembl |
|
rs749905295 CA9898819 |
1036 | M>L | No |
ClinGen ExAC gnomAD |
|
RCV000497319 CA9898820 rs758124206 |
1036 | M>T | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs749905295 CA409310611 |
1036 | M>V | No |
ClinGen ExAC gnomAD |
|
RCV002527196 CA9898821 RCV000502919 rs766069204 |
1038 | L>F | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA315887855 rs1043583190 |
1038 | L>P | No |
ClinGen TOPMed |
|
RCV000503922 rs537313958 COSM1027699 CA9898823 |
1041 | G>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs148770948 CA9898845 |
1043 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA315888952 rs765622958 |
1043 | L>W | No |
ClinGen Ensembl |
|
CA9898846 rs757397747 |
1045 | S>R | No |
ClinGen ExAC gnomAD |
|
rs1157243819 CA409310764 |
1046 | G>S | No |
ClinGen gnomAD |
|
CA409310775 rs1457968586 |
1047 | G>R | No |
ClinGen TOPMed gnomAD |
|
CA409310798 rs1600641988 |
1048 | V>G | No |
ClinGen Ensembl |
|
TCGA novel | 1050 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1050 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9898848 rs746141039 |
1054 | A>T | No |
ClinGen ExAC gnomAD |
|
rs772292207 CA9898849 |
1054 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV000438084 rs1057520166 CA16603306 |
1057 | Q>* | No |
ClinGen ClinVar TOPMed dbSNP |
|
rs780849949 CA9898850 |
1057 | Q>R | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1058 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409310942 rs1317866404 |
1058 | E>V | No |
ClinGen TOPMed |
|
rs1568727884 CA409311135 |
1064 | S>R | No |
ClinGen Ensembl |
|
rs369914012 CA9898853 |
1065 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA9898855 rs759142089 |
1066 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA409311271 rs1600642047 |
1067 | S>R | No |
ClinGen Ensembl |
|
CA409311292 rs1600642056 |
1068 | V>G | No |
ClinGen Ensembl |
|
CA409311305 rs1600642060 |
1069 | V>G | No |
ClinGen Ensembl |
|
rs767131745 CA9898856 |
1072 | V>M | No |
ClinGen ExAC gnomAD |
|
CA409311895 rs1419028252 |
1074 | R>G | No |
ClinGen gnomAD |
|
TCGA novel | 1074 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1075 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9898873 rs745325323 |
1077 | T>S | No |
ClinGen ExAC gnomAD |
|
CA409312778 rs1309774912 |
1078 | G>V | No |
ClinGen gnomAD |
|
rs1228837691 CA409312794 |
1079 | S>A | No |
ClinGen TOPMed |
|
CA9898875 rs771471974 |
1080 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs771471974 CA9898874 |
1080 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898876 rs760217592 |
1085 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs764494681 CA9898877 |
1086 | A>G | No |
ClinGen ExAC gnomAD |
|
rs951654073 CA315890985 |
1087 | I>V | No |
ClinGen TOPMed gnomAD |
|
rs151045115 CA315891121 |
1092 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1325196204 CA409313388 |
1098 | S>P | No |
ClinGen TOPMed |
|
CA315891162 rs370604835 |
1099 | M>K | No |
ClinGen ESP |
|
CA315891151 rs907308395 |
1099 | M>V | No |
ClinGen TOPMed |
|
rs776990168 CA9898894 |
1100 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9898896 rs765579597 |
1104 | S>F | No |
ClinGen ExAC gnomAD |
|
CA409313566 rs1600643985 |
1105 | P>A | No |
ClinGen Ensembl |
|
rs773805869 CA9898897 |
1106 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763345479 CA9898898 |
1106 | H>P | No |
ClinGen ExAC gnomAD |
|
CA409313600 rs374285087 |
1106 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs763345479 CA9898899 |
1106 | H>R | No |
ClinGen ExAC gnomAD |
|
CA409313587 rs773805869 |
1106 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs182494903 CA9898901 |
1108 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
RCV000438557 CA9898902 rs767791225 |
1108 | P>L | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA315891216 rs866319620 COSM1183336 |
1109 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA9898903 rs752955081 |
1109 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750426526 CA409313950 |
1116 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs758222891 CA9898907 |
1119 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 1121 | Y>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs966972955 CA315891245 |
1125 | N>I | No |
ClinGen Ensembl |
|
CA315891269 rs1000781606 |
1134 | I>V | No |
ClinGen Ensembl |
|
CA9898911 rs780885728 |
1140 | D>E | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1141 | H>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1280871412 CA409314721 |
1143 | N>D | No |
ClinGen gnomAD |
|
rs772329530 CA315896140 |
1149 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs772329530 CA9898948 |
1149 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1352291536 CA409316403 |
1151 | E>G | No |
ClinGen TOPMed |
|
rs1394719112 CA409316419 |
1152 | D>N | No |
ClinGen gnomAD |
|
CA409316471 rs1341350197 |
1154 | A>S | No |
ClinGen gnomAD |
|
CA409316489 rs141326036 |
1155 | I>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA9898951 rs141326036 |
1155 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA315896147 rs75553836 |
1157 | A>S | No |
ClinGen Ensembl |
|
CA9898952 rs773077638 |
1158 | V>I | No |
ClinGen ExAC gnomAD |
|
CA9898953 rs200389766 |
1159 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1327900585 CA409316741 |
1166 | M>R | No |
ClinGen Ensembl |
|
rs1278825617 CA409316733 |
1166 | M>V | No |
ClinGen gnomAD |
|
CA409316871 rs1402821056 |
1172 | G>D | No |
ClinGen TOPMed |
|
CA9898958 rs563646954 |
1175 | A>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA9898960 rs777348579 |
1178 | R>C | No |
ClinGen ExAC gnomAD |
|
CA9898961 rs748965329 COSM1027703 |
1178 | R>H | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed |
rs777348579 CA315896242 |
1178 | R>S | No |
ClinGen ExAC gnomAD |
|
rs1352614318 CA409317100 |
1187 | F>V | No |
ClinGen Ensembl |
|
rs147582953 CA9898962 |
1189 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA409317145 rs1189770046 |
1189 | H>Y | No |
ClinGen gnomAD |
|
rs970880832 CA315896258 |
1190 | I>T | No |
ClinGen Ensembl |
|
rs199663964 CA315896268 |
1191 | M>V | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 1192 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409317248 rs1363292551 |
1193 | K>I | No |
ClinGen TOPMed |
|
CA409317277 rs1174701950 |
1195 | R>G | No |
ClinGen gnomAD |
|
TCGA novel | 1197 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9898990 rs774144910 |
1197 | P>S | No |
ClinGen ExAC gnomAD |
|
RCV000503049 CA409320286 rs1212143011 |
1198 | T>I | No |
ClinGen ClinVar dbSNP gnomAD |
|
CA409320279 rs1600542292 |
1198 | T>P | No |
ClinGen Ensembl |
|
rs999187279 CA315901326 |
1199 | I>T | No |
ClinGen TOPMed |
|
rs1180535589 CA409320355 |
1200 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA9898992 rs760655501 |
1200 | R>W | No |
ClinGen ExAC gnomAD |
|
CA9898993 rs775447075 |
1201 | D>N | No |
ClinGen ExAC gnomAD |
|
CA9898994 rs760639976 COSM1027705 |
1203 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA9898996 rs753350616 |
1205 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA315901368 rs937998574 |
1205 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
COSM3389815 CA315901383 rs773301479 |
1208 | A>D | pancreas [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
rs1055068959 CA315901376 |
1208 | A>S | No |
ClinGen TOPMed |
|
CA9898997 rs566135657 |
1209 | Q>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1350655703 CA409320715 |
1210 | M>I | No |
ClinGen gnomAD |
|
CA9898999 rs758904830 |
1210 | M>V | No |
ClinGen ExAC gnomAD |
|
CA9899000 rs780540626 |
1211 | V>M | No |
ClinGen ExAC gnomAD |
|
CA315901417 rs917983356 |
1213 | S>Y | No |
ClinGen Ensembl |
|
rs752023536 CA9899001 |
1215 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA9899003 rs769315845 |
1217 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409320930 rs769315845 |
1217 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9899005 rs769842728 |
1219 | R>H | No |
ClinGen ExAC gnomAD |
|
rs1181492172 CA409321135 |
1225 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs775296325 CA9899008 |
1228 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs760532505 CA9899009 |
1230 | H>R | No |
ClinGen ExAC gnomAD |
|
CA315901516 rs534505410 |
1231 | Q>E | No |
ClinGen Ensembl |
|
CA9899010 rs768595731 |
1231 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA409321331 rs1170184640 |
1235 | D>H | No |
ClinGen gnomAD |
|
RCV000193366 CA206804 rs369727237 |
1236 | H>P | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA409321355 rs369727237 |
1236 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA9899013 rs750162391 |
1238 | G>A | No |
ClinGen ExAC gnomAD |
|
rs766857408 CA9899015 |
1241 | V>L | No |
ClinGen ExAC |
|
CA409321497 rs1396061818 |
1242 | E>D | No |
ClinGen TOPMed gnomAD |
|
CA409321573 rs1600542540 |
1246 | Q>R | No |
ClinGen Ensembl |
|
CA315901548 rs1045535421 |
1248 | T>S | No |
ClinGen gnomAD |
|
CA9899016 rs199510566 |
1248 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1308414756 CA409321613 |
1249 | C>S | No |
ClinGen gnomAD |
|
rs570016433 CA9899018 |
1251 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs766010319 CA9899034 |
1254 | T>I | No |
ClinGen ExAC gnomAD |
|
CA9899036 rs759985917 |
1255 | I>T | No |
ClinGen ExAC gnomAD |
|
rs143009676 CA9899035 |
1255 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1480677503 CA409321961 |
1256 | F>S | No |
ClinGen gnomAD |
|
rs1255202813 CA409321972 |
1257 | Q>* | No |
ClinGen gnomAD |
|
rs1487149640 CA409322024 |
1259 | H>R | No |
ClinGen TOPMed |
|
rs376819444 CA9899037 |
1261 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA9899038 rs753305440 |
1263 | A>T | No |
ClinGen ExAC gnomAD |
|
rs756554552 CA9899039 |
1264 | I>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1265 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9899041 rs753872438 |
1266 | S>A | No |
ClinGen ExAC gnomAD |
|
rs1436410177 CA409322126 |
1266 | S>C | No |
ClinGen gnomAD |
|
rs757491379 CA9899042 COSM1027709 |
1270 | A>D | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA9899044 rs746043194 |
1273 | C>F | No |
ClinGen ExAC gnomAD |
|
CA9899043 rs779241429 |
1273 | C>S | No |
ClinGen ExAC gnomAD |
|
CA9899045 rs754864724 |
1274 | L>F | No |
ClinGen ExAC gnomAD |
|
CA409322261 rs1223753023 |
1276 | E>Q | No |
ClinGen TOPMed |
|
rs1568737012 CA9899049 |
1278 | A>DHLPHCQ* | No |
ClinGen Ensembl |
|
rs1285055942 CA9899050 |
1278 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA409322304 rs1172050685 |
1278 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA409322314 rs1451163097 |
1279 | C>S | No |
ClinGen gnomAD |
|
CA409322326 rs1219271974 |
1280 | N>D | No |
ClinGen gnomAD |
|
rs769816652 CA9899053 |
1281 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9899052 rs769816652 |
1281 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9899054 rs770317385 |
1282 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1473370799 CA409322374 |
1283 | F>C | No |
ClinGen gnomAD |
|
CA409322397 rs1445614260 |
1284 | P>R | No |
ClinGen TOPMed |
|
CA9899055 rs774121482 |
1286 | T>M | No |
ClinGen ExAC gnomAD |
|
rs774121482 CA409322425 |
1286 | T>R | No |
ClinGen ExAC gnomAD |
|
rs1470431225 CA409322448 RCV000598000 |
1288 | M>V | No |
ClinGen ClinVar TOPMed dbSNP |
|
rs767937591 CA9899057 |
1290 | A>V | No |
ClinGen ExAC gnomAD |
|
CA9899059 rs761201261 |
1291 | I>T | No |
ClinGen ExAC gnomAD |
|
rs754318827 CA9899061 |
1292 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA9899060 rs764533856 |
1292 | R>W | No |
ClinGen ExAC gnomAD |
|
rs757395043 CA9899062 |
1293 | L>P | No |
ClinGen ExAC gnomAD |
|
rs1355687781 RCV000499641 CA409322537 |
1295 | R>C | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA409322538 rs150273470 COSM1027713 |
1295 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP NCI-TCGA TOPMed gnomAD |
CA315903242 rs150273470 |
1295 | R>L | No |
ClinGen ESP TOPMed gnomAD |
|
CA409322564 rs1291874161 |
1296 | F>S | No |
ClinGen gnomAD |
|
CA9899064 rs758487125 |
1298 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs752495010 CA9899066 |
1299 | K>N | No |
ClinGen ExAC gnomAD |
|
rs781075417 CA9899065 |
1299 | K>R | No |
ClinGen ExAC gnomAD |
|
CA9899069 rs200097694 |
1301 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA9899068 rs777898909 |
1301 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs199964803 CA9899070 |
1303 | E>G | No |
ClinGen ESP ExAC gnomAD |
|
rs542819649 CA409322711 |
1304 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA315903294 rs1039724431 |
1306 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA9899072 rs371146257 |
1306 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs780901142 CA9899092 |
1312 | T>K | No |
ClinGen ExAC gnomAD |
|
rs1197127784 CA409323352 |
1313 | S>N | No |
ClinGen TOPMed |
|
TCGA novel | 1315 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1316 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409323394 rs1342370443 |
1316 | M>V | No |
ClinGen gnomAD |
|
rs797045257 RCV000194473 CA208657 |
1321 | G>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA409323438 rs1267748309 |
1322 | D>N | No |
ClinGen TOPMed |
|
rs1204395185 CA409323482 |
1325 | W>* | No |
ClinGen TOPMed |
|
TCGA novel | 1325 | W>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409323494 rs1263411905 |
1326 | V>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
TCGA novel | 1327 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9899093 rs771587053 |
1327 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs779719987 CA9899094 |
1328 | G>A | No |
ClinGen ExAC gnomAD |
|
rs746657787 CA9899095 |
1332 | I>L | No |
ClinGen ExAC gnomAD |
|
rs1449237414 CA409323580 |
1333 | L>F | No |
ClinGen gnomAD |
|
TCGA novel | 1335 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9899096 rs374632843 RCV000436139 |
1335 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
CA409323617 rs1230479686 |
1336 | L>V | No |
ClinGen TOPMed |
|
rs369847284 CA9899097 |
1337 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA315904512 rs367961999 |
1337 | S>P | No |
ClinGen ESP TOPMed |
|
rs762417574 CA9899098 |
1339 | I>L | No |
ClinGen ExAC gnomAD |
|
rs770155650 CA409323683 |
1341 | N>I | No |
ClinGen ExAC gnomAD |
|
rs770155650 CA9899099 |
1341 | N>S | No |
ClinGen ExAC gnomAD |
|
CA9899100 rs773748754 |
1342 | R>S | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1343 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA315904523 rs996245590 |
1347 | V>I | No |
ClinGen TOPMed |
|
CA409323801 rs1386969246 |
1349 | T>A | No |
ClinGen gnomAD |
|
CA409323869 rs1600546185 |
1350 | R>S | No |
ClinGen Ensembl |
|
TCGA novel | 1350 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs749791242 CA9899118 |
1353 | T>I | No |
ClinGen ExAC gnomAD |
|
RCV001009223 rs1600546214 |
1354 | V>missing | No |
ClinVar dbSNP |
|
rs1316955568 CA409323906 |
1354 | V>I | No |
ClinGen gnomAD |
|
rs774506095 CA9899120 |
1355 | M>T | No |
ClinGen ExAC gnomAD |
|
CA409323965 rs1357969958 |
1357 | E>D | No |
ClinGen gnomAD |
|
rs1225103038 CA409323972 |
1358 | I>V | No |
ClinGen gnomAD |
|
CA409323995 rs1334116229 |
1359 | M>T | No |
ClinGen TOPMed |
|
rs1415618208 CA409324028 |
1361 | S>G | No |
ClinGen TOPMed |
|
rs759867790 CA9899121 |
1361 | S>N | No |
ClinGen ExAC gnomAD |
|
CA409324046 rs1482968668 |
1362 | Y>C | No |
ClinGen TOPMed gnomAD |
|
rs1460431406 CA409324093 |
1364 | H>Q | No |
ClinGen TOPMed |
|
CA409324091 rs1419695432 COSM359701 |
1364 | H>R | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA409324087 rs1252981301 |
1364 | H>Y | No |
ClinGen gnomAD |
|
rs369193549 CA9899124 |
1365 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA9899123 rs369193549 |
1365 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA9899127 rs765874625 |
1378 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409324453 rs587780280 |
1379 | F>C | No |
ClinGen ExAC gnomAD |
|
CA9899128 rs573211337 |
1379 | F>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
RCV000116404 CA230898 rs587780280 |
1379 | F>S | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA9899130 rs202242624 COSM1027715 |
1380 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
CA9899129 rs780749916 |
1380 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409324557 rs1195692916 |
1382 | F>V | No |
ClinGen TOPMed |
|
CA9899133 rs145745338 |
1386 | K>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs980052482 CA315904850 |
1389 | E>A | No |
ClinGen Ensembl |
|
CA9899134 rs374177628 |
1389 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA9899135 rs774595647 |
1390 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs772245839 CA9899137 |
1392 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs745991700 CA9899136 |
1392 | S>P | No |
ClinGen ExAC gnomAD |
|
CA409326132 rs1429340166 |
1397 | W>L | No |
ClinGen TOPMed |
|
rs1363893921 CA409326140 |
1398 | M>V | No |
ClinGen gnomAD |
|
COSM1283472 CA409326153 rs1394516987 |
1399 | T>A | autonomic_ganglia [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs1435867959 CA409326161 |
1399 | T>I | No |
ClinGen TOPMed gnomAD |
|
rs1435867959 CA409326159 |
1399 | T>R | No |
ClinGen TOPMed gnomAD |
|
CA409326155 rs1394516987 |
1399 | T>S | No |
ClinGen TOPMed |
|
CA9899156 rs747196156 |
1401 | T>I | No |
ClinGen ExAC gnomAD |
|
rs768879754 CA9899157 |
1402 | C>F | No |
ClinGen ExAC gnomAD |
|
CA9899158 rs776699871 |
1403 | N>S | No |
ClinGen ExAC gnomAD |
|
CA409326219 rs376257322 |
1404 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1430999905 COSM1245314 CA409326223 |
1405 | A>T | Variant assessed as Somatic; 0.0 impact. oesophagus [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
CA409326239 rs1469827786 |
1405 | A>V | No |
ClinGen gnomAD |
|
CA409326255 rs1319305357 |
1407 | Y>H | No |
ClinGen TOPMed gnomAD |
|
CA409326286 rs1476501927 |
1408 | A>T | No |
ClinGen TOPMed |
|
CA409326323 rs1429219989 |
1409 | I>F | No |
ClinGen gnomAD |
|
rs1429219989 CA409326295 |
1409 | I>L | No |
ClinGen gnomAD |
|
rs770711126 CA9899160 |
1411 | D>G | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1413 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1219069402 CA409326562 |
1417 | Y>F | No |
ClinGen gnomAD |
|
CA409326700 rs1274609562 |
1422 | E>A | No |
ClinGen TOPMed |
|
rs943907079 CA315910661 |
1424 | L>F | No |
ClinGen TOPMed |
|
TCGA novel | 1424 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9899161 rs774333258 |
1427 | D>E | No |
ClinGen ExAC gnomAD |
|
CA9899162 rs759412939 |
1428 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA409326842 rs1224155930 |
1429 | F>C | No |
ClinGen TOPMed gnomAD |
|
COSM1165638 CA409326862 rs1267608963 |
1430 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs1010086911 CA315910674 |
1432 | L>F | No |
ClinGen gnomAD |
|
rs144201853 CA9899166 |
1433 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs752211996 CA9899164 |
1433 | Q>L | No |
ClinGen ExAC gnomAD |
|
rs752211996 CA409326936 |
1433 | Q>P | No |
ClinGen ExAC gnomAD |
|
rs904453328 CA315910695 |
1435 | C>Y | No |
ClinGen TOPMed gnomAD |
|
CA409327059 rs1600548565 |
1436 | V>A | No |
ClinGen Ensembl |
|
rs1270547439 CA409327085 |
1437 | K>E | No |
ClinGen gnomAD |
|
rs373590241 CA315911163 |
1439 | D>G | No |
ClinGen ESP gnomAD |
|
CA9899192 rs766953564 |
1444 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs148720220 CA9899193 |
1445 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs781194740 CA9899194 |
1447 | G>D | No |
ClinGen ExAC gnomAD |
|
CA409327497 rs1194425052 |
1449 | N>D | No |
ClinGen TOPMed |
|
CA409327525 rs1204547863 |
1450 | C>Y | No |
ClinGen gnomAD |
|
CA315911187 rs966236145 |
1455 | V>L | No |
ClinGen Ensembl |
|
CA409327689 rs1568740025 |
1458 | N>H | No |
ClinGen Ensembl |
|
CA9899197 rs747003638 COSM135886 |
1460 | E>K | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs747003638 CA409327746 |
1460 | E>Q | No |
ClinGen ExAC gnomAD |
|
rs1207439334 CA409327926 |
1465 | E>K | No |
ClinGen TOPMed |
|
CA9899200 RCV000501912 rs775564236 RCV002527197 |
1468 | D>G | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA9899201 rs371481572 |
1472 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA409328188 rs1394546344 |
1473 | C>F | No |
ClinGen TOPMed gnomAD |
|
rs1394546344 CA409328190 |
1473 | C>S | No |
ClinGen TOPMed gnomAD |
|
rs1329843479 CA409328228 |
1474 | M>I | No |
ClinGen gnomAD |
|
rs1411847728 CA409328210 |
1474 | M>V | No |
ClinGen gnomAD |
|
CA409328244 rs1405437030 |
1475 | L>W | No |
ClinGen TOPMed gnomAD |
|
CA409328387 rs1568740066 |
1480 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
rs776211361 CA9899203 |
1481 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 1483 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs142296282 CA9899204 |
1484 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA315911434 rs1046086866 |
1492 | V>I | No |
ClinGen gnomAD |
|
rs1308781826 CA409328858 |
1493 | G>A | No |
ClinGen gnomAD |
|
TCGA novel | 1495 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs749129958 CA315911451 |
1496 | E>D | No |
ClinGen Ensembl |
|
CA9899234 rs768063246 |
1497 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1156727593 CA409329027 |
1501 | K>E | No |
ClinGen gnomAD |
|
rs760809126 CA9899236 |
1502 | H>P | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1503 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs546688171 CA9899245 |
1505 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA9899246 rs374800429 |
1506 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 1507 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1600550906 CA409330205 |
1507 | L>P | No |
ClinGen Ensembl |
|
rs770441868 CA9899248 |
1509 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9899250 rs774033935 |
1509 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs369465543 CA9899251 |
1510 | Q>R | No |
ClinGen ESP ExAC gnomAD |
|
TCGA novel | 1512 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA9899252 rs776033637 |
1513 | S>R | No |
ClinGen ExAC gnomAD |
|
rs571333777 CA9899253 |
1514 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA315912075 rs1031926506 |
1515 | I>R | No |
ClinGen TOPMed gnomAD |
|
CA409330258 rs1225200167 |
1516 | D>N | No |
ClinGen gnomAD |
|
rs974721706 CA315912079 |
1519 | P>A | No |
ClinGen TOPMed |
|
rs974721706 CA409330287 |
1519 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs764238309 CA9899254 |
1521 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9899255 rs753818003 |
1522 | R>G | No |
ClinGen ExAC gnomAD |
|
rs987838609 CA315912095 |
1522 | R>K | No |
ClinGen TOPMed |
|
CA9899256 CA409330354 rs762113220 COSM3963641 |
1523 | G>R | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA9899257 rs765423625 |
1524 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409330420 rs1568740916 |
1525 | S>G | No |
ClinGen Ensembl |
|
rs750625602 CA9899258 |
1526 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA9899259 rs754882237 |
1528 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs754882237 CA409330513 |
1528 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs781078519 CA9899260 |
1529 | N>I | No |
ClinGen ExAC gnomAD |
|
CA315912120 rs914913476 |
1529 | N>K | No |
ClinGen TOPMed |
|
CA315912122 rs977701230 |
1530 | P>R | No |
ClinGen Ensembl |
|
rs1164015494 CA409330631 |
1531 | T>A | No |
ClinGen gnomAD |
|
CA409330644 rs1372095064 |
1531 | T>I | No |
ClinGen gnomAD |
|
CA9899262 rs145219415 |
1532 | D>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA409330659 rs145219415 |
1532 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA315912125 rs145219415 |
1532 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA9899261 rs752691054 |
1532 | D>Y | No |
ClinGen ExAC gnomAD |
|
CA409330674 rs1451352505 |
1533 | D>N | No |
ClinGen gnomAD |
|
CA315912134 rs936388533 |
1536 | K>* | No |
ClinGen Ensembl |
|
CA409330830 rs1178780652 |
1538 | R>K | No |
ClinGen TOPMed |
|
rs1248568108 CA409330866 |
1539 | P>S | No |
ClinGen gnomAD |
|
CA9899267 rs745505570 |
1540 | Y>F | No |
ClinGen ExAC gnomAD |
|
CA9899269 rs775764028 |
1541 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409330891 rs775764028 |
1541 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9899270 rs775764028 |
1541 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1458225377 CA409330914 |
1542 | N>D | No |
ClinGen gnomAD |
|
rs1210720979 CA409332259 |
1542 | N>S | No |
ClinGen TOPMed gnomAD |
|
rs774245280 CA315914601 |
1543 | Q>R | No |
ClinGen Ensembl |
|
CA9899285 rs200400452 |
1545 | L>Q | No |
ClinGen ExAC gnomAD |
|
rs1241503888 CA409332384 |
1545 | L>V | No |
ClinGen TOPMed gnomAD |
|
rs1188051326 CA409332434 |
1546 | F>L | No |
ClinGen gnomAD |
|
rs1263401370 CA409332475 |
1547 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA409332518 rs1196896506 |
1549 | L>F | No |
ClinGen gnomAD |
|
CA409332520 rs1196896506 |
1549 | L>V | No |
ClinGen gnomAD |
|
rs747419699 CA9899288 |
1555 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9899289 rs769030991 |
1557 | L>F | No |
ClinGen ExAC gnomAD |
|
rs1270433333 CA409332738 |
1557 | L>S | No |
ClinGen TOPMed gnomAD |
|
CA409332931 rs1341577726 |
1562 | T>I | No |
ClinGen gnomAD |
|
CA9899290 rs777068717 |
1562 | T>P | No |
ClinGen ExAC gnomAD |
|
CA9899291 rs748633846 |
1565 | N>I | No |
ClinGen ExAC gnomAD |
|
CA409333048 rs1347452507 |
1567 | V>A | No |
ClinGen gnomAD |
|
rs1219900407 CA409333061 |
1568 | F>L | No |
ClinGen gnomAD |
|
rs769770620 CA9899292 |
1570 | P>S | No |
ClinGen ExAC gnomAD |
|
rs369538378 CA9899293 |
1571 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs766756267 CA9899295 |
1572 | T>M | No |
ClinGen ExAC gnomAD |
|
CA9899297 rs760454987 |
1574 | K>E | No |
ClinGen ExAC gnomAD |
|
rs930645577 CA315914643 |
1574 | K>N | No |
ClinGen gnomAD |
|
CA9899298 rs763938732 |
1574 | K>R | No |
ClinGen ExAC gnomAD |
|
rs1324957672 CA409333255 |
1577 | D>G | No |
ClinGen gnomAD |
|
CA315914655 rs529228290 |
1578 | A>V | No |
ClinGen 1000Genomes |
|
CA9899301 rs540964686 |
1580 | H>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1361571069 CA409333331 |
1582 | V>A | No |
ClinGen gnomAD |
|
rs1361571069 CA409333328 |
1582 | V>D | No |
ClinGen gnomAD |
|
CA9899302 rs749883196 |
1583 | A>V | No |
ClinGen ExAC gnomAD |
|
rs201449025 CA9899304 COSM2761643 |
1584 | A>T | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs1279054035 CA409333355 |
1585 | Q>* | No |
ClinGen gnomAD |
|
rs1413714413 CA409334516 |
1586 | Q>R | No |
ClinGen gnomAD |
|
rs778490868 CA9899328 |
1587 | D>N | No |
ClinGen ExAC gnomAD |
|
rs1047131672 CA315916059 |
1588 | T>M | No |
ClinGen TOPMed gnomAD |
|
CA9899330 rs771150151 |
1590 | D>Y | No |
ClinGen ExAC gnomAD |
|
CA9899331 rs779067106 |
1591 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9899332 rs778562514 |
1593 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 1600 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs769569255 CA9899336 |
1600 | Q>H | No |
ClinGen ExAC TOPMed |
|
rs761704780 CA9899335 |
1600 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs1450319534 CA409335086 |
1601 | G>D | No |
ClinGen gnomAD |
|
rs941852341 CA315916084 |
1602 | M>V | No |
ClinGen Ensembl |
|
CA9899337 rs773188678 |
1603 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA409335227 rs1397731767 |
1605 | Y>F | No |
ClinGen gnomAD |
|
CA409335246 rs1277072639 |
1606 | M>V | No |
ClinGen TOPMed gnomAD |
|
rs751034758 CA9899339 |
1607 | S>A | No |
ClinGen ExAC gnomAD |
|
rs1218659570 CA409335305 |
1608 | S>F | No |
ClinGen gnomAD |
|
rs758951822 CA9899340 |
1609 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs767239875 CA9899341 |
1610 | H>Q | No |
ClinGen ExAC |
|
rs995799318 COSM189808 CA315916105 |
1610 | H>Y | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
rs372176306 CA9899342 |
1611 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs756606048 CA9899343 |
1615 | L>S | No |
ClinGen ExAC gnomAD |
|
rs1192961520 CA409335483 |
1616 | D>G | No |
ClinGen gnomAD |
|
rs541124438 CA9899344 |
1616 | D>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA315916128 rs541124438 |
1616 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA9899346 rs376890535 |
1620 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1600558067 CA409335648 |
1621 | S>F | No |
ClinGen Ensembl |
|
CA409335667 rs1344849152 |
1622 | H>R | No |
ClinGen gnomAD |
|
rs757797270 CA9899347 |
1622 | H>Y | No |
ClinGen ExAC gnomAD |
|
CA409335784 rs1428678483 |
1627 | A>D | No |
ClinGen gnomAD |
|
CA409335828 rs1468353227 |
1628 | F>L | No |
ClinGen gnomAD |
|
rs377361134 CA315916155 |
1629 | N>S | No |
ClinGen Ensembl |
|
rs1174193247 CA409335881 |
1630 | S>C | No |
ClinGen TOPMed gnomAD |
|
rs1174193247 CA409335882 |
1630 | S>F | No |
ClinGen TOPMed gnomAD |
|
CA315916161 rs370851843 |
1631 | N>D | No |
ClinGen TOPMed gnomAD |
|
rs778880126 CA9899348 |
1631 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1400192821 CA409335930 |
1634 | Q>E | No |
ClinGen gnomAD |
|
CA9899351 rs149693297 |
1634 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA9899350 rs559551723 |
1634 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs771896640 CA315916187 |
1635 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9899353 rs771896640 |
1635 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA9899352 rs747215606 |
1635 | R>W | No |
ClinGen ExAC gnomAD |
|
CA409335958 rs1344137732 |
1637 | V>I | No |
ClinGen TOPMed |
|
CA9899355 rs749248890 |
1640 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA409336667 rs1216127891 |
1642 | G>D | No |
ClinGen gnomAD |
|
CA409336018 rs1284288591 |
1642 | G>S | No |
ClinGen gnomAD |
|
rs755146384 CA9899370 |
1644 | K>R | No |
ClinGen ExAC gnomAD |
|
rs1291260144 CA409336756 |
1646 | K>R | No |
ClinGen gnomAD |
|
CA315917659 rs587780281 |
1647 | S>P | No |
ClinGen ExAC gnomAD |
|
RCV000116407 rs587780281 CA230902 |
1647 | S>T | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1211906897 CA409336799 |
1649 | P>L | No |
ClinGen gnomAD |
|
CA9899371 rs749125976 |
1650 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9899372 rs770627875 |
1660 | A>V | No |
ClinGen ExAC gnomAD |
|
CA9899373 rs774405307 |
1662 | C>S | No |
ClinGen ExAC gnomAD |
|
rs745736864 CA9899374 |
1668 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1414046326 CA409337149 |
1669 | M>T | No |
ClinGen TOPMed |
|
rs771617796 CA9899375 |
1670 | Y>C | No |
ClinGen ExAC gnomAD |
|
rs540246597 CA230894 RCV000116393 |
1675 | R>C | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA409337246 rs1600561548 |
1676 | R>G | No |
ClinGen Ensembl |
|
rs573621508 CA9899378 |
1678 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
rs776392250 CA9899379 |
1683 | Q>* | No |
ClinGen ExAC gnomAD |
|
CA409337401 rs1314767872 |
1685 | R>K | No |
ClinGen gnomAD |
|
rs958965195 CA315917684 |
1686 | L>V | No |
ClinGen Ensembl |
|
CA9899381 rs765505222 |
1687 | L>F | No |
ClinGen ExAC gnomAD |
|
CA9899382 rs750952311 |
1688 | T>A | No |
ClinGen ExAC gnomAD |
|
CA409338813 rs1484074411 |
1689 | V>I | No |
ClinGen TOPMed gnomAD |
|
CA9899399 rs148821408 |
1690 | C>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1260551324 CA409338905 |
1693 | A>T | No |
ClinGen gnomAD |
|
rs375184784 CA9899400 |
1694 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
CA9899401 rs763355473 |
1695 | A>V | No |
ClinGen ExAC gnomAD |
|
rs368361056 COSM243014 CA9899402 |
1696 | Y>C | prostate [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
rs759674594 CA9899404 |
1700 | V>A | No |
ClinGen ExAC gnomAD |
|
CA9899406 rs543611054 RCV000512867 |
1703 | E>Q | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs201225495 CA409339141 |
1706 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1303771541 CA409339136 |
1706 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1304104693 CA409339143 |
1707 | E>K | No |
ClinGen TOPMed |
|
rs1292799086 CA409339171 |
1708 | A>V | No |
ClinGen gnomAD |
|
rs529589416 CA9899408 |
1710 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1290476602 CA409339331 |
1716 | L>F | No |
ClinGen TOPMed |
|
TCGA novel | 1720 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1721 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1341147831 CA409339471 |
1724 | N>S | No |
ClinGen gnomAD |
|
TCGA novel | 1728 | F>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA409339679 rs1490090353 COSM459736 |
1728 | F>L | cervix [Cosmic] | No |
ClinGen cosmic curated gnomAD |
TCGA novel | 1728 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1730 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs374689193 CA9899431 |
1731 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA315919153 rs867132626 |
1732 | A>D | No |
ClinGen Ensembl |
|
CA409339779 rs1600566391 |
1733 | S>L | No |
ClinGen Ensembl |
|
rs1192225359 CA409339800 |
1734 | M>I | No |
ClinGen TOPMed gnomAD |
|
rs1488555585 CA409339795 |
1734 | M>R | No |
ClinGen gnomAD |
|
rs1488555585 CA409339793 |
1734 | M>T | No |
ClinGen gnomAD |
|
rs1160849560 CA409339920 |
1740 | C>G | No |
ClinGen gnomAD |
|
rs1396574532 CA409339923 |
1740 | C>Y | No |
ClinGen TOPMed |
|
CA315919158 rs987373610 |
1741 | E>K | No |
ClinGen Ensembl |
|
rs758181809 CA9899433 |
1743 | M>L | No |
ClinGen ExAC gnomAD |
|
RCV000486863 RCV000766326 CA9899434 rs367994107 |
1743 | M>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs867942606 CA315919169 |
1744 | Q>* | No |
ClinGen Ensembl |
|
CA9899435 COSM399424 rs751546651 |
1744 | Q>H | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs867942606 CA315919166 |
1744 | Q>K | No |
ClinGen Ensembl |
|
TCGA novel | 1745 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1437293387 CA409340063 |
1747 | L>R | No |
ClinGen gnomAD |
|
CA409340085 rs1330514891 |
1749 | P>A | No |
ClinGen gnomAD |
|
CA409340082 rs1330514891 |
1749 | P>S | No |
ClinGen gnomAD |
|
CA315919179 rs1043621228 |
1750 | E>K | No |
ClinGen TOPMed |
|
CA409340122 rs1448655140 |
1751 | L>F | No |
ClinGen gnomAD |
|
TCGA novel | 1751 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs755646774 CA9899439 |
1752 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1453179238 CA409340157 |
1755 | L>V | No |
ClinGen TOPMed |
|
CA9899441 rs199605635 |
1756 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA9899440 rs139003168 |
1756 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1258610591 CA409340194 |
1758 | F>L | No |
ClinGen TOPMed |
|
CA9899442 rs771293652 |
1761 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1456809670 CA409340224 |
1761 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA9899444 rs376589021 |
1763 | G>S | No |
ClinGen ESP ExAC gnomAD |
|
CA409340362 rs1170087235 |
1768 | I>M | No |
ClinGen gnomAD |
|
CA409340347 rs1416230759 |
1768 | I>V | No |
ClinGen gnomAD |
|
rs1381459206 CA409340374 |
1769 | W>* | No |
ClinGen TOPMed |
|
rs776030422 CA409340368 |
1769 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs776030422 CA9899447 |
1769 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs760729763 CA9899448 |
1770 | I>R | No |
ClinGen ExAC gnomAD |
|
rs764216021 CA9899449 |
1771 | P>T | No |
ClinGen ExAC gnomAD |
|
rs1056619925 CA315919223 |
1772 | E>D | No |
ClinGen TOPMed gnomAD |
|
CA315919227 rs887123458 |
1774 | P>L | No |
ClinGen TOPMed gnomAD |
|
rs1600566634 CA409340503 |
1777 | V>G | No |
ClinGen Ensembl |
|
CA9899450 rs776730943 |
1778 | P>Q | No |
ClinGen ExAC gnomAD |
|
rs1285554755 CA409340537 |
1780 | A>P | No |
ClinGen TOPMed gnomAD |
|
rs950896925 CA315919235 |
1783 | P>L | No |
ClinGen TOPMed |
|
CA9899451 rs762059419 |
1783 | P>S | No |
ClinGen ExAC gnomAD |
|
rs571409699 CA9899452 |
1784 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs571409699 CA315919238 |
1784 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
TCGA novel | 1786 | W>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
No associated diseases with Q9Y6D5
9 regional properties for Q9Y6D5
Type | Name | Position | InterPro Accession |
---|---|---|---|
repeat | Armadillo | 112 - 196 | IPR000225-1 |
repeat | Armadillo | 198 - 239 | IPR000225-2 |
repeat | Armadillo | 242 - 281 | IPR000225-3 |
repeat | Armadillo | 283 - 323 | IPR000225-4 |
repeat | Armadillo | 325 - 365 | IPR000225-5 |
repeat | Armadillo | 367 - 407 | IPR000225-6 |
repeat | Armadillo | 410 - 450 | IPR000225-7 |
domain | Importin-alpha, importin-beta-binding domain | 1 - 102 | IPR002652 |
repeat | Atypical Arm repeat | 464 - 513 | IPR032413 |
Functions
15 GO annotations of cellular component
Name | Definition |
---|---|
anchoring junction | A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix. |
asymmetric synapse | A type of synapse occurring between an axon and a dendritic spine or dendritic shaft. Asymmetric synapses, the most abundant synapse type in the central nervous system, involve axons that contain predominantly spherical vesicles and contain a thickened postsynaptic density. Most or all synapses of this type are excitatory. |
axonemal microtubule | A microtubule in the axoneme of a eukaryotic cilium or flagellum; an axoneme contains nine modified doublet microtubules, which may or may not surround a pair of single microtubules. |
cytoplasmic vesicle | A vesicle found in the cytoplasm of a cell. |
cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
dendritic spine | A small, membranous protrusion from a dendrite that forms a postsynaptic compartment, typically receiving input from a single presynapse. They function as partially isolated biochemical and an electrical compartments. Spine morphology is variable:they can be thin, stubby, mushroom, or branched, with a continuum of intermediate morphologies. They typically terminate in a bulb shape, linked to the dendritic shaft by a restriction. Spine remodeling is though to be involved in synaptic plasticity. |
Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
Golgi membrane | The lipid bilayer surrounding any of the compartments of the Golgi apparatus. |
intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
microtubule organizing center | An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides. |
perinuclear region of cytoplasm | Cytoplasm situated near, or occurring around, the nucleus. |
recycling endosome | An organelle consisting of a network of tubules that functions in targeting molecules, such as receptors transporters and lipids, to the plasma membrane. |
symmetric synapse | A synapse that lacks an electron dense postsynaptic specialization. In vertebtrates, these occur primarily on dendrite shafts and neuronal cell bodies and involve persynapses containing clusters of predominantly flattened or elongated vesicles and are typcially inhibitory. |
trans-Golgi network | The network of interconnected tubular and cisternal structures located within the Golgi apparatus on the side distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination. |
4 GO annotations of molecular function
Name | Definition |
---|---|
GABA receptor binding | Binding to a gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor. |
guanyl-nucleotide exchange factor activity | Stimulates the exchange of GDP to GTP on a signaling GTPase, changing its conformation to its active form. Guanine nucleotide exchange factors (GEFs) act by stimulating the release of guanosine diphosphate (GDP) to allow binding of guanosine triphosphate (GTP), which is more abundant in the cell under normal cellular physiological conditions. |
myosin binding | Binding to a myosin; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments. |
protein kinase A regulatory subunit binding | Binding to one or both of the regulatory subunits of protein kinase A. |
9 GO annotations of biological process
Name | Definition |
---|---|
endomembrane system organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endomembrane system. |
endosome organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of endosomes. |
exocytosis | A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. |
Golgi to plasma membrane transport | The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis. |
intracellular signal transduction | The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell. |
positive regulation of tumor necrosis factor production | Any process that activates or increases the frequency, rate or extent of tumor necrosis factor production. |
protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
receptor recycling | The process that results in the return of receptor molecules to an active state and an active cellular location after they have been stimulated by a ligand. An active state is when the receptor is ready to receive a signal. |
regulation of ARF protein signal transduction | Any process that modulates the frequency, rate or extent of ARF protein signal transduction. |
14 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
O46382 | ARFGEF1 | Brefeldin A-inhibited guanine nucleotide-exchange protein 1 | Bos taurus (Bovine) | PR |
Q9Y6D6 | ARFGEF1 | Brefeldin A-inhibited guanine nucleotide-exchange protein 1 | Homo sapiens (Human) | PR |
Q9UIA0 | CYTH4 | Cytohesin-4 | Homo sapiens (Human) | SS |
Q5JU85 | IQSEC2 | IQ motif and SEC7 domain-containing protein 2 | Homo sapiens (Human) | EV |
Q9UPP2 | IQSEC3 | IQ motif and SEC7 domain-containing protein 3 | Homo sapiens (Human) | SS |
Q6DN90 | IQSEC1 | IQ motif and SEC7 domain-containing protein 1 | Homo sapiens (Human) | EV |
Q99418 | CYTH2 | Cytohesin-2 | Homo sapiens (Human) | SS |
O43739 | CYTH3 | Cytohesin-3 | Homo sapiens (Human) | EV |
Q15438 | CYTH1 | Cytohesin-1 | Homo sapiens (Human) | SS |
Q92538 | GBF1 | Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 | Homo sapiens (Human) | PR |
A2A5R2 | Arfgef2 | Brefeldin A-inhibited guanine nucleotide-exchange protein 2 | Mus musculus (Mouse) | PR |
G3X9K3 | Arfgef1 | Brefeldin A-inhibited guanine nucleotide-exchange protein 1 | Mus musculus (Mouse) | PR |
D4A631 | Arfgef1 | Brefeldin A-inhibited guanine nucleotide-exchange protein 1 | Rattus norvegicus (Rat) | PR |
Q7TSU1 | Arfgef2 | Brefeldin A-inhibited guanine nucleotide-exchange protein 2 | Rattus norvegicus (Rat) | PR |
10 | 20 | 30 | 40 | 50 | 60 |
MQESQTKSMF | VSRALEKILA | DKEVKRPQHS | QLRRACQVAL | DEIKAEIEKQ | RLGTAAPPKA |
70 | 80 | 90 | 100 | 110 | 120 |
NFIEADKYFL | PFELACQSKS | PRVVSTSLDC | LQKLIAYGHI | TGNAPDSGAP | GKRLIDRIVE |
130 | 140 | 150 | 160 | 170 | 180 |
TICSCFQGPQ | TDEGVQLQII | KALLTAVTSP | HIEIHEGTIL | QTVRTCYNIY | LASKNLINQT |
190 | 200 | 210 | 220 | 230 | 240 |
TAKATLTQML | NVIFTRMENQ | VLQEARELEK | PIQSKPQSPV | IQAAAVSPKF | VRLKHSQAQS |
250 | 260 | 270 | 280 | 290 | 300 |
KPTTPEKTDL | TNGEHARSDS | GKVSTENGDA | PRERGSSLSG | TDDGAQEVVK | DILEDVVTSA |
310 | 320 | 330 | 340 | 350 | 360 |
IKEAAEKHGL | TEPERVLGEL | ECQECAIPPG | VDENSQTNGI | ADDRQSLSSA | DNLESDAQGH |
370 | 380 | 390 | 400 | 410 | 420 |
QVAARFSHVL | QKDAFLVFRS | LCKLSMKPLG | EGPPDPKSHE | LRSKVVSLQL | LLSVLQNAGP |
430 | 440 | 450 | 460 | 470 | 480 |
VFRTHEMFIN | AIKQYLCVAL | SKNGVSSVPD | VFELSLAIFL | TLLSNFKMHL | KMQIEVFFKE |
490 | 500 | 510 | 520 | 530 | 540 |
IFLNILETST | SSFEHRWMVI | QTLTRICADA | QCVVDIYVNY | DCDLNAANIF | ERLVNDLSKI |
550 | 560 | 570 | 580 | 590 | 600 |
AQGRSGHELG | MTPLQELSLR | KKGLECLVSI | LKCMVEWSKD | LYVNPNHQTS | LGQERLTDQE |
610 | 620 | 630 | 640 | 650 | 660 |
IGDGKGLDMA | RRCSVTSMES | TVSSGTQTTV | QDDPEQFEVI | KQQKEIIEHG | IELFNKKPKR |
670 | 680 | 690 | 700 | 710 | 720 |
GIQFLQEQGM | LGTSVEDIAQ | FLHQEERLDS | TQVGDFLGDS | ARFNKEVMYA | YVDQLDFCEK |
730 | 740 | 750 | 760 | 770 | 780 |
EFVSALRTFL | EGFRLPGEAQ | KIDRLMEKFA | ARYIECNQGQ | TLFASADTAY | VLAYSIIMLT |
790 | 800 | 810 | 820 | 830 | 840 |
TDLHSPQVKN | KMTKEQYIKM | NRGINDSKDL | PEEYLSSIYE | EIEGKKIAMK | ETKELTIATK |
850 | 860 | 870 | 880 | 890 | 900 |
STKQNVASEK | QRRLLYNLEM | EQMAKTAKAL | MEAVSHAKAP | FTSATHLDHV | RPMFKLVWTP |
910 | 920 | 930 | 940 | 950 | 960 |
LLAAYSIGLQ | NCDDTEVASL | CLEGIRCAIR | IACIFGMQLE | RDAYVQALAR | FSLLTASSSI |
970 | 980 | 990 | 1000 | 1010 | 1020 |
TEMKQKNIDT | IKTLITVAHT | DGNYLGNSWH | EILKCISQLE | LAQLIGTGVK | TRYLSGSGRE |
1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
REGSLKGHTL | AGEEFMGLGL | GNLVSGGVDK | RQMASFQESV | GETSSQSVVV | AVDRIFTGST |
1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
RLDGNAIVDF | VRWLCAVSMD | ELASPHHPRM | FSLQKIVEIS | YYNMNRIRLQ | WSRIWHVIGD |
1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
HFNKVGCNPN | EDVAIFAVDS | LRQLSMKFLE | KGELANFRFQ | KDFLRPFEHI | MKKNRSPTIR |
1210 | 1220 | 1230 | 1240 | 1250 | 1260 |
DMAIRCIAQM | VNSQAANIRS | GWKNIFAVFH | QAASDHDGNI | VELAFQTTCH | IVTTIFQHHF |
1270 | 1280 | 1290 | 1300 | 1310 | 1320 |
PAAIDSFQDA | VKCLSEFACN | AAFPDTSMEA | IRLIRFCGKY | VSERPRVLQE | YTSDDMNVAP |
1330 | 1340 | 1350 | 1360 | 1370 | 1380 |
GDRVWVRGWF | PILFELSCII | NRCKLDVRTR | GLTVMFEIMK | SYGHTFEKHW | WQDLFRIVFR |
1390 | 1400 | 1410 | 1420 | 1430 | 1440 |
IFDNMKLPEQ | LSEKSEWMTT | TCNHALYAIC | DVFTQFYEAL | NEVLLSDVFA | QLQWCVKQDN |
1450 | 1460 | 1470 | 1480 | 1490 | 1500 |
EQLARSGTNC | LENLVISNGE | KFSPEVWDET | CNCMLDIFKT | TIPHVLLTWR | PVGMEEDSSE |
1510 | 1520 | 1530 | 1540 | 1550 | 1560 |
KHLDVDLDRQ | SLSSIDKNPS | ERGQSQLSNP | TDDSWKGRPY | ANQKLFASLL | IKCVVQLELI |
1570 | 1580 | 1590 | 1600 | 1610 | 1620 |
QTIDNIVFYP | ATSKKEDAEH | MVAAQQDTLD | ADIHIETEDQ | GMYKYMSSQH | LFKLLDCLQE |
1630 | 1640 | 1650 | 1660 | 1670 | 1680 |
SHSFSKAFNS | NYEQRTVLWR | AGFKGKSKPN | LLKQETSSLA | CCLRILFRMY | VDENRRDSWE |
1690 | 1700 | 1710 | 1720 | 1730 | 1740 |
EIQQRLLTVC | SEALAYFITV | NSESHREAWT | SLLLLLLTKT | LKINDEKFKA | HASMYYPYLC |
1750 | 1760 | 1770 | 1780 | ||
EIMQFDLIPE | LRAVLRKFFL | RIGVVYKIWI | PEEPSQVPAA | LSPVW |