Q9WUH2
PR
Gene name |
Lhx9 |
Protein name |
LIM/homeobox protein Lhx9 |
Names |
LIM homeobox protein 9 |
Species |
Mus musculus (Mouse) |
KEGG Pathway |
mmu:16876 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9WUH2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9WUH2-F1 | Predicted | AlphaFoldDB |
11 variants for Q9WUH2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs3388502901 | 19 | A>V | No | EVA | |
| rs3388505590 | 66 | E>D | No | EVA | |
| rs3390715118 | 68 | P>A | No | EVA | |
| rs3390724134 | 74 | C>* | No | EVA | |
| rs3388502874 | 95 | C>Y | No | EVA | |
| rs3388500579 | 222 | V>G | No | EVA | |
| rs3388504998 | 246 | C>* | No | EVA | |
| rs3388505554 | 257 | D>E | No | EVA | |
| rs3388504689 | 278 | Q>R | No | EVA | |
| rs3388501690 | 356 | P>S | No | EVA | |
| rs3388502591 | 379 | N>Y | No | EVA |
No associated diseases with Q9WUH2
1 regional properties for Q9WUH2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | Vinculin, conserved site | 183 - 203 | IPR000633 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA-binding transcription factor activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II. |
| metal ion binding | Binding to a metal ion. |
| RNA polymerase II transcription regulatory region sequence-specific DNA binding | Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II. |
| sequence-specific double-stranded DNA binding | Binding to double-stranded DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA, e.g. promotor binding or rDNA binding. |
8 GO annotations of biological process
| Name | Definition |
|---|---|
| cell population proliferation | The multiplication or reproduction of cells, resulting in the expansion of a cell population. |
| dorsal spinal cord interneuron anterior axon guidance | The process in which the migration of an axon growth cone of a dorsal spinal cord interneuron is directed to a specific target site in the anterior direction along the anterior-posterior body axis in response to a combination of attractive and repulsive cues. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism. |
| female gonad development | The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure. |
| gonad morphogenesis | The process in which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals. |
| male gonad development | The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure. |
| negative regulation of DNA-templated transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
| neuron differentiation | The process in which a relatively unspecialized cell acquires specialized features of a neuron. |
| regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
21 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| A0JNI8 | LHX9 | LIM/homeobox protein Lhx9 | Bos taurus (Bovine) | PR |
| F1NEA7 | DMBX1 | Diencephalon/mesencephalon homeobox protein 1 | Gallus gallus (Chicken) | PR |
| Q90963 | PRRX2 | Paired mesoderm homeobox protein 2 | Gallus gallus (Chicken) | PR |
| Q90881 | LHX9 | LIM/homeobox protein Lhx9 | Gallus gallus (Chicken) | PR |
| Q8IRC7 | Awh | LIM/homeobox protein Awh | Drosophila melanogaster (Fruit fly) | PR |
| Q8NHV9 | RHOXF1 | Rhox homeobox family member 1 | Homo sapiens (Human) | PR |
| O95076 | ALX3 | Homeobox protein aristaless-like 3 | Homo sapiens (Human) | PR |
| Q9BQY4 | RHOXF2 | Rhox homeobox family member 2 | Homo sapiens (Human) | PR |
| Q99811 | PRRX2 | Paired mesoderm homeobox protein 2 | Homo sapiens (Human) | PR |
| P50458 | LHX2 | LIM/homeobox protein Lhx2 | Homo sapiens (Human) | PR |
| O15266 | SHOX | Short stature homeobox protein | Homo sapiens (Human) | PR |
| Q9NQ69 | LHX9 | LIM/homeobox protein Lhx9 | Homo sapiens (Human) | PR |
| P63013 | Prrx1 | Paired mesoderm homeobox protein 1 | Mus musculus (Mouse) | PR |
| Q8VIH1 | Nobox | Homeobox protein NOBOX | Mus musculus (Mouse) | PR |
| Q06348 | Prrx2 | Paired mesoderm homeobox protein 2 | Mus musculus (Mouse) | PR |
| O88933 | Esx1 | Extraembryonic, spermatogenesis, homeobox 1 (Homeobox protein SPX1) (Homeodomain protein EPX) | Mus musculus (Mouse) | EV |
| P36198 | Lhx2 | LIM/homeobox protein Lhx2 | Rattus norvegicus (Rat) | PR |
| Q80W90 | Lhx9 | LIM/homeobox protein Lhx9 | Rattus norvegicus (Rat) | PR |
| Q28G02 | siamois | Homeobox protein siamois | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| Q566X8 | dmbx1b | Diencephalon/mesencephalon homeobox protein 1-B | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| Q1LWV4 | lhx9 | LIM/homeobox protein Lhx9 | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEIVGCRAEN | NSCPFRPPAM | LFHGISGGHI | QGIMEEMERR | SKTEARLTKG | TQLNGRDAGM |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PPLSPEKPAL | CAGCGGKISD | RYYLLAVDKQ | WHLRCLKCCE | CKLALESELT | CFAKDGSIYC |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KEDYYRRFSV | QRCARCHLGI | SASEMVMRAR | DSVYHLSCFT | CSTCNKTLTT | GDHFGMKDSL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VYCRAHFETL | LQGEYPPQLS | YTELAAKSGG | LALPYFNGTG | TVQKGRPRKR | KSPALGVDIV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| NYNSGCNENE | ADHLDRDQQP | YPPSQKTKRM | RTSFKHHQLR | TMKSYFAINH | NPDAKDLKQL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| AQKTGLTKRV | LQVWFQNARA | KFRRNLLRQE | NGGVDKADGT | SLPAPPSADS | GALTPPGTAT |
| 370 | 380 | 390 | |||
| TLTDLTNPTV | TVVTTVTSNM | DSHEPGSPSQ | TTLTNLF |