Q9UPQ4
Gene name |
TRIM35 (HLS5, KIAA1098) |
Protein name |
E3 ubiquitin-protein ligase TRIM35 |
Names |
Hemopoietic lineage switch protein 5 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:23087 |
EC number |
2.3.2.27: Aminoacyltransferases |
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

1 structures for Q9UPQ4
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
AF-Q9UPQ4-F1 | Predicted | AlphaFoldDB |
493 variants for Q9UPQ4
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
rs1049055092 CA174212461 |
2 | E>* | No |
ClinGen TOPMed |
|
CA370797459 rs753008590 |
3 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370797454 rs767884249 |
3 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4688095 rs767884249 |
3 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4688096 rs753008590 |
3 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1586062917 CA370797438 |
4 | S>N | No |
ClinGen Ensembl |
|
CA370797418 rs1450890329 |
5 | P>A | No |
ClinGen gnomAD |
|
rs994849862 CA174212456 |
5 | P>R | No |
ClinGen Ensembl |
|
rs762551853 CA370797381 |
6 | D>E | No |
ClinGen ExAC gnomAD |
|
CA4688092 rs766028609 |
6 | D>G | No |
ClinGen ExAC gnomAD |
|
rs751238182 CA4688093 |
6 | D>N | No |
ClinGen ExAC gnomAD |
|
CA370797393 rs751238182 |
6 | D>Y | No |
ClinGen ExAC gnomAD |
|
CA370797346 rs772787780 |
8 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA174212446 rs772787780 |
8 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs772787780 CA4688090 |
8 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370797334 rs765087352 |
9 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4688089 rs765087352 |
9 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA174212444 rs765087352 |
9 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4688087 CA370797325 rs776309326 |
10 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA174212437 rs201933491 |
11 | P>L | No |
ClinGen 1000Genomes gnomAD |
|
CA4688086 rs768474918 |
11 | P>S | No |
ClinGen ExAC gnomAD |
|
rs1315357495 COSM4138684 CA370797303 |
12 | S>F | kidney [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA4688084 rs774551484 |
13 | R>C | No |
ClinGen ExAC gnomAD |
|
CA370797296 rs771056447 |
13 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4688083 rs771056447 |
13 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749385003 CA4688082 |
14 | S>A | No |
ClinGen ExAC gnomAD |
|
rs777843116 CA370797263 COSM1313968 |
15 | F>L | Variant assessed as Somatic; impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs1042549505 CA174212429 |
16 | K>E | No |
ClinGen TOPMed gnomAD |
|
CA4688080 rs756612982 |
16 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4688078 rs781462069 |
17 | E>* | No |
ClinGen ExAC TOPMed |
|
rs1185744151 CA370797228 |
18 | E>V | No |
ClinGen gnomAD |
|
rs1331465362 CA370797178 |
21 | C>* | No |
ClinGen TOPMed |
|
CA370797195 rs1206022236 |
21 | C>R | No |
ClinGen gnomAD |
|
rs1341545623 CA370797174 |
22 | A>S | No |
ClinGen gnomAD |
|
rs1351600804 CA370797170 |
22 | A>V | No |
ClinGen TOPMed |
|
rs886527588 CA174212418 |
24 | C>F | No |
ClinGen TOPMed |
|
rs1226886970 CA370797110 |
25 | Y>C | No |
ClinGen gnomAD |
|
CA4688075 rs766120297 |
26 | D>N | No |
ClinGen ExAC gnomAD |
|
CA370797073 rs1413503544 |
27 | P>A | No |
ClinGen gnomAD |
|
CA174212412 rs369514645 |
29 | R>H | No |
ClinGen ESP TOPMed gnomAD |
|
rs1393683095 CA370797013 |
30 | D>N | No |
ClinGen TOPMed gnomAD |
|
CA370797016 rs1393683095 |
30 | D>Y | No |
ClinGen TOPMed gnomAD |
|
rs1474746099 CA370796950 |
34 | L>P | No |
ClinGen gnomAD |
|
CA370796941 rs1252524605 |
35 | R>C | No |
ClinGen gnomAD |
|
CA370796940 rs761701476 |
35 | R>H | No |
ClinGen ExAC gnomAD |
|
CA4688071 rs761701476 |
35 | R>P | No |
ClinGen ExAC gnomAD |
|
rs1252524605 CA370796944 |
35 | R>S | No |
ClinGen gnomAD |
|
CA370796925 rs1248435349 |
36 | C>R | No |
ClinGen gnomAD |
|
rs1195465299 CA370796916 COSM1456349 |
36 | C>Y | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs1275245783 CA370796823 |
40 | F>L | No |
ClinGen gnomAD |
|
CA370796793 rs1456742556 |
42 | R>C | No |
ClinGen TOPMed |
|
rs775207348 CA4688067 |
43 | G>W | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 45 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1289595737 CA370796752 |
46 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs1444925730 CA370796742 |
47 | R>C | No |
ClinGen gnomAD |
|
rs1444925730 CA370796744 |
47 | R>S | No |
ClinGen gnomAD |
|
CA370796726 rs1327558862 |
48 | C>* | No |
ClinGen gnomAD |
|
rs1429717120 CA370796698 |
50 | E>D | No |
ClinGen TOPMed |
|
rs1586062508 CA370796688 |
51 | V>G | No |
ClinGen Ensembl |
|
rs1563448910 CA370796693 |
51 | V>L | No |
ClinGen Ensembl |
|
rs1586062488 CA370796668 |
53 | V>G | No |
ClinGen Ensembl |
|
CA174212395 rs983289294 |
53 | V>M | No |
ClinGen TOPMed gnomAD |
|
rs1460788251 CA370796648 |
55 | P>S | No |
ClinGen gnomAD |
|
CA370796615 rs1468493556 |
58 | P>L | No |
ClinGen gnomAD |
|
rs769898660 CA4688063 |
59 | V>A | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 59 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA370796600 rs1312316455 |
60 | C>S | No |
ClinGen TOPMed |
|
CA370796595 rs1338871369 |
60 | C>W | No |
ClinGen TOPMed |
|
CA370796586 rs1181228702 |
61 | K>R | No |
ClinGen gnomAD |
|
rs995193521 CA370796566 |
63 | R>C | No |
ClinGen TOPMed gnomAD |
|
rs995193521 CA174212384 |
63 | R>G | No |
ClinGen TOPMed gnomAD |
|
CA370796564 rs1202787437 |
63 | R>H | No |
ClinGen gnomAD |
|
rs369572943 CA4688062 |
64 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA4688061 rs369572943 |
64 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs559446313 CA4688060 |
64 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA370796542 rs1226013472 |
65 | S>L | No |
ClinGen gnomAD |
|
CA370796533 rs1349215086 |
66 | P>L | No |
ClinGen gnomAD |
|
rs1372536210 CA370796505 |
69 | L>M | No |
ClinGen gnomAD |
|
CA4688055 rs778326005 |
70 | R>G | No |
ClinGen ExAC gnomAD |
|
CA370796493 rs1439634329 |
70 | R>H | No |
ClinGen gnomAD |
|
rs1389132175 CA370796486 |
71 | T>A | No |
ClinGen gnomAD |
|
CA4688054 rs756785477 |
71 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370796471 rs1398706448 |
72 | N>S | No |
ClinGen gnomAD |
|
rs1303807170 CA370796435 |
76 | N>D | No |
ClinGen Ensembl |
|
rs906634895 CA174212361 |
76 | N>S | No |
ClinGen TOPMed gnomAD |
|
rs1396890417 CA370796425 |
77 | N>S | No |
ClinGen gnomAD |
|
CA370796419 rs1453964543 |
78 | L>P | No |
ClinGen gnomAD |
|
rs764032258 CA4688051 |
79 | V>A | No |
ClinGen ExAC gnomAD |
|
rs142163721 CA370796403 |
81 | K>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA4688050 rs142163721 |
81 | K>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs752521011 CA4688049 |
83 | L>R | No |
ClinGen ExAC gnomAD |
|
CA4688048 rs767253175 |
84 | R>C | No |
ClinGen ExAC gnomAD |
|
rs1349437466 CA370796385 |
84 | R>H | No |
ClinGen TOPMed gnomAD |
|
rs1349437466 CA370796383 |
84 | R>L | No |
ClinGen TOPMed gnomAD |
|
rs763134688 CA370796381 |
85 | E>* | No |
ClinGen ExAC gnomAD |
|
rs763134688 CA4688047 |
85 | E>K | No |
ClinGen ExAC gnomAD |
|
CA4688046 rs773456109 |
86 | E>Q | No |
ClinGen ExAC gnomAD |
|
rs147604361 CA4688045 |
87 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA174212350 rs894012621 |
87 | A>V | No |
ClinGen gnomAD |
|
CA370796358 rs1325631983 |
88 | E>D | No |
ClinGen TOPMed gnomAD |
|
rs145238225 CA4688044 |
89 | G>V | No |
ClinGen ESP ExAC gnomAD |
|
CA4688043 rs377318623 |
90 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1377388658 CA370796344 |
91 | R>C | No |
ClinGen TOPMed gnomAD |
|
CA4688042 rs769314129 |
91 | R>L | No |
ClinGen ExAC gnomAD |
|
rs974827238 CA370796335 |
92 | W>* | No |
ClinGen gnomAD |
|
CA370796330 rs944402718 CA174212339 |
92 | W>C | No |
ClinGen gnomAD |
|
CA174212342 rs974827238 |
92 | W>S | No |
ClinGen gnomAD |
|
CA4688040 rs780612302 |
94 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370796293 rs772530568 |
95 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1241835768 CA370796286 |
96 | R>C | No |
ClinGen gnomAD |
|
CA370796284 rs1189301339 |
96 | R>H | No |
ClinGen gnomAD |
|
CA370796260 rs1278773656 |
98 | S>L | No |
ClinGen gnomAD |
|
CA370796261 rs1278773656 |
98 | S>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs1277334537 CA370796248 |
99 | R>H | No |
ClinGen Ensembl |
|
CA370796246 rs1277334537 |
99 | R>P | No |
ClinGen Ensembl |
|
rs1586062023 CA370796251 |
99 | R>S | No |
ClinGen Ensembl |
|
CA4688034 rs753393162 |
101 | C>S | No |
ClinGen ExAC |
|
CA4688032 rs756068122 |
102 | R>C | No |
ClinGen ExAC gnomAD |
|
CA4688031 rs752610844 |
103 | L>P | No |
ClinGen ExAC gnomAD |
|
CA370796191 rs1338516343 |
103 | L>V | No |
ClinGen gnomAD |
|
rs573527374 CA4688030 |
104 | H>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
TCGA novel | 104 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA370796174 rs1353543341 |
105 | R>G | No |
ClinGen gnomAD |
|
rs759373247 CA4688029 |
107 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs955229406 CA174212317 |
109 | S>R | No |
ClinGen TOPMed gnomAD |
|
CA4688027 rs765512974 |
110 | L>F | No |
ClinGen ExAC gnomAD |
|
CA370796067 rs1419287196 |
112 | C>G | No |
ClinGen gnomAD |
|
CA370796063 rs1166151155 |
112 | C>Y | No |
ClinGen gnomAD |
|
CA370796030 rs1208979180 |
114 | E>* | No |
ClinGen TOPMed |
|
rs1563448418 CA370796022 |
114 | E>D | No |
ClinGen Ensembl |
|
CA4688025 rs776868750 |
115 | D>E | No |
ClinGen ExAC gnomAD |
|
CA370796018 rs1246958810 |
115 | D>N | No |
ClinGen TOPMed |
|
rs1464753504 CA370796005 |
116 | K>E | No |
ClinGen TOPMed |
|
rs1385611340 CA370795945 |
120 | C>G | No |
ClinGen Ensembl |
|
CA370795939 rs1586061879 |
120 | C>W | No |
ClinGen Ensembl |
|
rs776135309 CA4688022 |
121 | C>R | No |
ClinGen ExAC gnomAD |
|
rs1427668034 CA370795929 |
121 | C>Y | No |
ClinGen TOPMed |
|
rs1273402755 CA370795900 |
122 | S>F | No |
ClinGen gnomAD |
|
CA4688020 rs746256855 |
122 | S>T | No |
ClinGen ExAC gnomAD |
|
CA370795843 rs1224213865 |
126 | D>Y | No |
ClinGen gnomAD |
|
CA370795832 rs1374179614 |
127 | P>T | No |
ClinGen gnomAD |
|
CA370795819 rs1376055107 |
128 | R>* | No |
ClinGen TOPMed |
|
rs1458837843 CA370795818 |
128 | R>Q | No |
ClinGen TOPMed |
|
rs1321479163 CA370795806 |
129 | H>R | No |
ClinGen TOPMed |
|
rs1003957125 CA174212297 |
129 | H>Y | No |
ClinGen Ensembl |
|
CA370795795 rs1299925576 |
130 | Q>H | No |
ClinGen gnomAD |
|
rs748843515 CA4688017 |
131 | G>E | No |
ClinGen ExAC gnomAD |
|
rs1388136044 CA370795778 |
132 | H>P | No |
ClinGen TOPMed |
|
CA174212295 rs1017223895 |
132 | H>Q | No |
ClinGen TOPMed |
|
CA370795766 rs1326812007 COSM1098648 |
133 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
CA370795753 rs1416054396 |
134 | V>L | No |
ClinGen gnomAD |
|
CA370795751 rs1416054396 |
134 | V>M | No |
ClinGen gnomAD |
|
rs950748011 CA174212291 |
135 | Q>* | No |
ClinGen TOPMed |
|
rs116161348 CA4688016 |
135 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs755591376 CA4688015 |
136 | P>L | No |
ClinGen ExAC gnomAD |
|
rs1420149355 CA370795729 |
136 | P>S | No |
ClinGen gnomAD |
|
rs1483806621 CA370795703 |
138 | K>N | No |
ClinGen gnomAD |
|
CA4688012 rs754818557 |
140 | T>I | No |
ClinGen ExAC gnomAD |
|
CA4688010 rs139267709 |
141 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA174212277 rs893956370 |
142 | H>Y | No |
ClinGen TOPMed |
|
rs1216449848 CA370795648 |
143 | D>G | No |
ClinGen gnomAD |
|
CA370795624 rs1222194276 |
145 | R>Q | No |
ClinGen gnomAD |
|
CA370795627 rs1303392795 |
145 | R>W | No |
ClinGen gnomAD |
|
rs565181133 CA370813662 |
148 | C>F | No |
ClinGen 1000Genomes gnomAD |
|
rs565181133 CA174225769 |
148 | C>Y | No |
ClinGen 1000Genomes gnomAD |
|
CA4687977 rs375639360 |
149 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 150 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs768017482 CA4687976 |
151 | M>T | No |
ClinGen ExAC |
|
rs747031866 CA4687975 |
154 | A>T | No |
ClinGen ExAC gnomAD |
|
CA4687974 rs779840181 |
156 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1198170891 CA370813522 |
156 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs1275386920 CA370813484 |
158 | K>E | No |
ClinGen gnomAD |
|
rs1212397559 CA370813464 |
158 | K>N | No |
ClinGen TOPMed gnomAD |
|
CA4687973 rs374055302 |
159 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
CA4687972 rs745660636 |
160 | K>E | No |
ClinGen ExAC gnomAD |
|
CA370813431 rs1457906496 |
160 | K>R | No |
ClinGen TOPMed |
|
rs778809602 CA4687971 |
161 | A>T | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 161 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA4687970 rs756426331 |
162 | F>V | No |
ClinGen ExAC gnomAD |
|
rs781373343 CA370813338 |
164 | A>D | No |
ClinGen ExAC gnomAD |
|
CA4687969 rs752944883 |
164 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370813345 rs752944883 |
164 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs781373343 CA4687968 |
164 | A>V | No |
ClinGen ExAC gnomAD |
|
rs1563441819 CA370813309 |
165 | M>T | No |
ClinGen Ensembl |
|
CA370813291 rs752168870 |
166 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687966 rs752168870 |
166 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687967 rs755009704 |
166 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs150850320 CA4687964 |
167 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA4687963 rs750822853 |
167 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs750822853 CA174225757 |
167 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1454839515 CA370813222 |
169 | Y>* | No |
ClinGen gnomAD |
|
rs767258025 CA4687961 |
169 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687960 rs370409864 |
171 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs370409864 CA174225756 |
171 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1255084298 CA370813190 |
171 | A>P | No |
ClinGen gnomAD |
|
rs768268487 CA4687959 |
172 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687957 COSM1098645 rs774997405 |
173 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs1563441735 CA370813075 |
176 | N>S | No |
ClinGen Ensembl |
|
CA4687931 rs772995880 |
178 | V>A | No |
ClinGen ExAC gnomAD |
|
CA370812435 rs1423633502 |
179 | E>Q | No |
ClinGen gnomAD |
|
CA370812431 rs1586046811 |
179 | E>V | No |
ClinGen Ensembl |
|
CA370812420 rs1189189767 |
181 | A>T | No |
ClinGen gnomAD |
|
rs1391531560 CA370812415 |
182 | W>R | No |
ClinGen TOPMed |
|
rs185776694 CA174224708 |
186 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1209021704 CA370812388 |
186 | R>Q | No |
ClinGen TOPMed gnomAD |
|
COSM1456347 rs185776694 CA4687929 |
186 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
CA370812377 rs527549535 |
188 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs527549535 CA4687927 |
188 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA174224695 rs527549535 |
188 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687928 rs780142942 |
188 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370812374 rs1380347993 |
189 | Q>* | No |
ClinGen TOPMed |
|
rs1385561933 CA370812372 |
189 | Q>R | No |
ClinGen gnomAD |
|
CA370812366 rs1390526272 |
190 | E>* | No |
ClinGen gnomAD |
|
CA4687926 rs746429043 |
190 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370812359 rs1586046763 |
191 | F>V | No |
ClinGen Ensembl |
|
rs369635979 CA4687925 |
195 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs554152967 CA4687924 |
195 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs554152967 CA370812329 |
195 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1586046732 CA370812324 |
196 | E>G | No |
ClinGen Ensembl |
|
TCGA novel | 197 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1586046718 CA370812317 |
197 | F>V | No |
ClinGen Ensembl |
|
rs1447365519 CA370812308 |
198 | L>W | No |
ClinGen gnomAD |
|
rs1482792264 CA370812304 |
199 | R>G | No |
ClinGen TOPMed |
|
rs767204567 CA4687919 |
202 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370812271 rs1449947010 |
203 | Q>R | No |
ClinGen TOPMed |
|
CA4687916 rs773943551 |
205 | I>F | No |
ClinGen ExAC gnomAD |
|
CA4687915 rs773943551 |
205 | I>V | No |
ClinGen ExAC gnomAD |
|
CA370812239 rs1166310471 |
208 | A>D | No |
ClinGen gnomAD |
|
rs1166310471 CA370812240 |
208 | A>V | No |
ClinGen gnomAD |
|
CA4687911 rs769613573 |
209 | M>T | No |
ClinGen ExAC gnomAD |
|
CA4687912 rs772907758 |
209 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687910 rs775672205 |
210 | A>G | No |
ClinGen ExAC gnomAD |
|
CA4687909 rs775672205 |
210 | A>V | No |
ClinGen ExAC gnomAD |
|
CA4687906 rs778922429 |
211 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1215303205 CA370812195 |
215 | Q>* | No |
ClinGen gnomAD |
|
CA370812162 rs1319907328 |
218 | L>V | No |
ClinGen gnomAD |
|
CA370812154 rs1311910603 |
219 | L>V | No |
ClinGen gnomAD |
|
CA4687902 rs756496452 |
220 | A>V | No |
ClinGen ExAC gnomAD |
|
CA4687900 rs143834830 |
221 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA370812118 rs1463319664 |
222 | E>D | No |
ClinGen gnomAD |
|
rs751148307 CA4687898 |
222 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687897 rs765867057 |
223 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA174224644 rs900342601 |
224 | M>V | No |
ClinGen TOPMed gnomAD |
|
rs1400787081 CA370812072 |
227 | L>F | No |
ClinGen gnomAD |
|
rs1311784281 CA370812067 |
228 | T>A | No |
ClinGen TOPMed |
|
CA370812025 rs1201555843 |
231 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA370812009 rs1465297607 |
233 | V>M | No |
ClinGen TOPMed |
|
rs776355971 CA4687892 |
234 | L>M | No |
ClinGen ExAC gnomAD |
|
rs759715669 CA4687889 |
238 | I>V | No |
ClinGen ExAC gnomAD |
|
rs771021049 CA4687887 |
239 | E>K | No |
ClinGen ExAC gnomAD |
|
rs1238011630 COSM1489207 CA370811940 |
240 | R>Q | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
CA370811944 rs1288201067 |
240 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs149727000 CA4687884 |
243 | M>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1388955163 CA370811912 |
243 | M>T | No |
ClinGen gnomAD |
|
CA4687885 rs149727000 |
243 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA4687882 rs781647067 |
245 | M>I | No |
ClinGen ExAC gnomAD |
|
CA370811832 rs1347432938 |
247 | E>D | No |
ClinGen TOPMed gnomAD |
|
rs145200366 CA174224612 |
249 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs201505344 COSM1098644 CA174224615 |
249 | D>N | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
CA4687878 rs139554946 COSM382537 |
250 | V>I | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
CA4687877 rs757925142 |
251 | S>C | No |
ClinGen ExAC gnomAD |
|
CA370811732 rs1343550219 |
254 | M>K | No |
ClinGen TOPMed |
|
CA174223520 rs1026803017 |
255 | K>E | No |
ClinGen TOPMed gnomAD |
|
CA4687855 rs151215946 |
259 | R>* | No |
ClinGen ESP ExAC gnomAD |
|
rs754868241 CA4687853 |
259 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
rs753753799 CA4687852 |
261 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA4687851 rs142245005 |
261 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA4687849 COSM1098643 rs549826465 |
262 | R>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
CA370810904 rs1169901315 |
262 | R>Q | No |
ClinGen gnomAD |
|
CA4687828 rs750585907 |
266 | T>I | No |
ClinGen ExAC gnomAD |
|
CA4687827 rs765461872 |
267 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687826 rs527461852 |
268 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1355066052 CA370810700 |
268 | E>G | No |
ClinGen gnomAD |
|
CA4687825 rs776798583 |
270 | E>Q | No |
ClinGen ExAC gnomAD |
|
rs1400872608 CA370810634 |
271 | P>R | No |
ClinGen gnomAD |
|
rs370563312 CA4687824 |
273 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1308073104 CA370810578 |
274 | P>T | No |
ClinGen gnomAD |
|
CA4687822 rs775964920 |
275 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370810549 rs1321534921 |
275 | G>V | No |
ClinGen gnomAD |
|
CA370810515 rs1194501938 |
276 | M>I | No |
ClinGen TOPMed |
|
rs141198602 CA174223256 |
278 | I>F | No |
ClinGen 1000Genomes gnomAD |
|
CA370810478 rs141198602 |
278 | I>V | No |
ClinGen 1000Genomes gnomAD |
|
COSM1098642 CA4687820 rs747656839 |
279 | D>N | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs1563436993 CA370810358 |
284 | L>P | No |
ClinGen Ensembl |
|
CA370810343 rs1478853618 |
285 | G>C | No |
ClinGen TOPMed |
|
CA4687818 rs770504502 |
286 | S>F | No |
ClinGen ExAC gnomAD |
|
rs1197408759 CA370810301 |
287 | L>Q | No |
ClinGen gnomAD |
|
rs1264516076 CA370810273 |
288 | Q>P | No |
ClinGen gnomAD |
|
CA4687816 rs777215107 |
290 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs199739805 CA4687815 |
290 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs761203689 CA370810220 |
291 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs761203689 CA4687813 |
291 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs761203689 CA174223241 |
291 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1346902905 CA370810149 |
293 | K>T | No |
ClinGen TOPMed gnomAD |
|
CA174223238 rs916279781 |
295 | M>I | No |
ClinGen Ensembl |
|
rs1232234794 CA370810095 |
295 | M>T | No |
ClinGen gnomAD |
|
CA370810056 rs1214705657 |
297 | A>T | No |
ClinGen TOPMed |
|
TCGA novel | 299 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA370809917 rs1401923454 |
301 | S>F | No |
ClinGen gnomAD |
|
CA4687787 rs752757475 |
304 | F>I | No |
ClinGen ExAC |
|
CA4687786 rs767921863 |
305 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs778017427 CA370808803 |
307 | D>A | No |
ClinGen Ensembl |
|
CA174222928 rs778017427 |
307 | D>G | No |
ClinGen Ensembl |
|
rs1317271600 CA370808797 |
308 | P>H | No |
ClinGen TOPMed gnomAD |
|
rs751950379 CA370808799 |
308 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687784 rs751950379 |
308 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1228968832 CA370808790 |
309 | N>I | No |
ClinGen TOPMed gnomAD |
|
CA4687783 rs200747493 |
309 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1228968832 CA370808792 |
309 | N>S | No |
ClinGen TOPMed gnomAD |
|
CA174222920 rs758620985 |
310 | T>I | No |
ClinGen Ensembl |
|
rs1586041669 CA370808788 |
310 | T>P | No |
ClinGen Ensembl |
|
CA4687781 rs140061010 |
311 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs146095513 CA4687780 |
312 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA370808745 rs560149230 |
317 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA4687777 rs560149230 |
317 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA370808729 rs780047474 |
319 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1586041602 CA370808724 |
320 | D>A | No |
ClinGen Ensembl |
|
rs749591000 CA4687774 |
320 | D>H | No |
ClinGen ExAC gnomAD |
|
COSM1098641 rs749591000 CA4687773 |
320 | D>N | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
COSM326756 CA174222905 rs935291269 |
322 | T>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
COSM326756 CA370808713 rs1162315090 |
322 | T>S | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs776766188 CA174222903 |
324 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1247230769 CA370808682 |
325 | T>I | No |
ClinGen gnomAD |
|
CA370808691 rs1457101713 |
325 | T>P | No |
ClinGen gnomAD |
|
rs756302157 CA4687771 |
327 | H>R | No |
ClinGen ExAC gnomAD |
|
CA4687772 rs777862986 |
327 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687770 rs371193513 |
328 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA4687769 COSM1552523 rs781291466 |
330 | R>C | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA174222899 rs779126497 |
330 | R>H | No |
ClinGen gnomAD |
|
CA174222897 rs982753049 |
331 | V>L | No |
ClinGen TOPMed gnomAD |
|
CA174222895 rs982753049 |
331 | V>M | No |
ClinGen TOPMed gnomAD |
|
rs758754920 CA4687765 |
333 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687766 rs758754920 |
333 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs764806703 CA4687763 |
336 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687762 rs761490206 |
336 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687760 rs763641371 |
337 | E>K | No |
ClinGen ExAC gnomAD |
|
rs760754715 CA4687759 |
338 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687758 rs775565401 |
338 | R>H | No |
ClinGen ExAC gnomAD |
|
CA174222885 rs963095336 |
340 | S>C | No |
ClinGen TOPMed |
|
CA4687757 rs772068039 |
341 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1563436213 CA370808470 |
342 | A>P | No |
ClinGen Ensembl |
|
rs774146159 CA4687755 |
342 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 344 | C>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1316726970 CA370808406 |
347 | G>V | No |
ClinGen gnomAD |
|
rs748368431 CA4687752 COSM1456346 |
349 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA370808388 rs1221271809 |
349 | R>H | No |
ClinGen gnomAD |
|
rs1442679071 CA370808364 |
351 | F>C | No |
ClinGen TOPMed |
|
CA174222872 rs768630421 |
353 | Q>* | No |
ClinGen TOPMed gnomAD |
|
CA174222873 rs768630421 |
353 | Q>K | No |
ClinGen TOPMed gnomAD |
|
rs150903051 CA4687751 |
354 | G>S | No |
ClinGen ESP ExAC TOPMed |
|
rs755033934 CA4687750 |
355 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 356 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs544322429 CA4687746 |
357 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs544322429 CA4687747 |
357 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
CA370808289 rs1418755114 |
357 | A>V | No |
ClinGen gnomAD |
|
CA174222860 rs893462780 |
358 | W>* | No |
ClinGen Ensembl |
|
rs1359361502 CA370808284 |
358 | W>R | No |
ClinGen gnomAD |
|
rs1253785272 CA370808256 |
360 | V>G | No |
ClinGen TOPMed |
|
CA370808239 rs1178040119 |
362 | L>F | No |
ClinGen gnomAD |
|
CA370808224 rs576535227 |
363 | G>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs576535227 CA4687745 |
363 | G>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs756911180 CA4687744 |
368 | W>* | No |
ClinGen ExAC gnomAD |
|
rs1478199974 CA370808113 |
370 | V>A | No |
ClinGen gnomAD |
|
CA370808124 rs1199954818 |
370 | V>L | No |
ClinGen Ensembl |
|
CA4687742 rs141555387 |
371 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA370808082 rs775082529 |
372 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687740 rs775082529 |
372 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370808055 rs1288145107 |
373 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA4687739 rs148377716 |
374 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs746780941 CA4687738 |
374 | R>H | No |
ClinGen ExAC gnomAD |
|
CA4687737 rs774054598 |
376 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770736526 CA4687736 |
376 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs770736526 CA174222850 |
376 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687735 rs748375413 |
379 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370807893 rs747100993 |
381 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687732 rs747100993 |
381 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs137997329 CA4687731 |
381 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs758948766 CA4687730 |
383 | G>D | No |
ClinGen ExAC gnomAD |
|
CA370807851 rs1464372695 |
383 | G>S | Variant assessed as Somatic; 4.678e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA370807808 rs1435694828 |
385 | S>L | No |
ClinGen gnomAD |
|
CA370807794 rs1376230527 |
386 | H>Y | No |
ClinGen TOPMed |
|
rs1427990158 CA370807702 |
389 | Y>C | No |
ClinGen gnomAD |
|
CA370807684 rs1346766632 |
390 | H>L | No |
ClinGen gnomAD |
|
rs1288225895 CA370807664 |
391 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA4687725 rs377511988 |
393 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA4687724 rs777582053 |
393 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370807633 rs777582053 |
393 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs766380938 CA4687723 |
394 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370807569 rs1320694740 |
398 | Y>C | No |
ClinGen gnomAD |
|
CA370807574 rs1586041213 |
398 | Y>H | No |
ClinGen Ensembl |
|
rs374227978 CA4687720 |
399 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
rs766151418 CA4687718 |
400 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs931871074 CA174222816 |
400 | C>Y | No |
ClinGen TOPMed gnomAD |
|
rs377763568 CA4687716 |
401 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
rs760859895 CA4687715 |
401 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs760859895 CA4687714 |
401 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687713 rs577124602 |
402 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs146964532 CA4687712 |
402 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs146964532 CA370807487 |
402 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1172026712 CA370807470 |
403 | Q>R | No |
ClinGen TOPMed |
|
rs148875535 CA4687710 |
405 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 408 | D>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA174222800 rs983012078 |
409 | H>N | No |
ClinGen TOPMed |
|
CA4687708 rs749685335 |
409 | H>R | No |
ClinGen ExAC gnomAD |
|
rs778243522 CA4687707 |
410 | C>R | No |
ClinGen ExAC gnomAD |
|
rs755871025 CA4687706 |
411 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA370807244 rs1358691103 |
412 | T>I | No |
ClinGen Ensembl |
|
CA4687704 rs373434031 |
413 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs750965412 CA4687702 |
414 | D>E | No |
ClinGen ExAC gnomAD |
|
rs1241953438 CA370807124 |
417 | T>M | No |
ClinGen gnomAD |
|
rs766348852 CA4687701 |
418 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1374307466 CA370807069 |
419 | P>L | No |
ClinGen gnomAD |
|
TCGA novel | 421 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs377746796 CA370807041 |
422 | L>M | No |
ClinGen TOPMed |
|
rs1586041073 CA370807020 |
423 | A>P | No |
ClinGen Ensembl |
|
CA370807002 rs1328136827 |
423 | A>V | No |
ClinGen gnomAD |
|
rs1392765990 CA370806961 |
425 | P>S | No |
ClinGen gnomAD |
|
CA370806942 rs1295424309 |
426 | R>C | No |
ClinGen gnomAD |
|
rs1422821170 CA370806939 |
426 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs533921646 CA4687698 |
427 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA4687697 rs760947998 COSM1230320 |
427 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA370806912 rs760947998 |
427 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1586041030 CA370806907 |
428 | L>V | No |
ClinGen Ensembl |
|
rs1362379210 CA370806884 |
429 | R>C | No |
ClinGen TOPMed gnomAD |
|
CA174222763 rs1032407682 |
429 | R>H | No |
ClinGen gnomAD |
|
CA4687695 rs199652032 |
430 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs771501390 CA4687692 |
433 | E>D | No |
ClinGen ExAC gnomAD |
|
rs1490024152 CA370806746 |
433 | E>Q | No |
ClinGen gnomAD |
|
rs1247677617 CA370806711 |
434 | C>R | No |
ClinGen gnomAD |
|
rs1241806398 COSM1456345 CA370806689 |
434 | C>Y | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
CA370806659 rs1168346838 |
435 | E>A | No |
ClinGen TOPMed |
|
CA4687690 rs773759764 |
436 | E>K | No |
ClinGen ExAC gnomAD |
|
CA4687689 rs770269341 |
437 | G>C | No |
ClinGen ExAC gnomAD |
|
CA370806612 rs770269341 |
437 | G>S | No |
ClinGen ExAC gnomAD |
|
rs780992660 COSM1268531 CA4687687 |
438 | E>K | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs1299069340 CA370806545 |
441 | F>V | No |
ClinGen gnomAD |
|
CA4687685 rs746549053 |
441 | F>Y | No |
ClinGen ExAC gnomAD |
|
rs779389279 CA4687684 |
442 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA370806498 rs1339952022 |
444 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs1478557177 CA370806489 |
444 | A>V | No |
ClinGen TOPMed gnomAD |
|
COSM1456344 rs886949517 CA174222744 |
446 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
rs765088471 CA4687681 |
446 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
TCGA novel | 448 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA370806429 rs1272188462 |
449 | H>Y | No |
ClinGen TOPMed |
|
rs767802318 CA4687678 |
451 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA4687677 rs143548752 |
452 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1363903898 CA370806387 |
452 | T>N | No |
ClinGen gnomAD |
|
COSM1456343 rs766345697 CA4687675 |
455 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA370806349 rs1341015065 |
455 | A>V | No |
ClinGen gnomAD |
|
rs147372571 CA4687674 |
456 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA174222734 rs761521091 |
456 | R>H | No |
ClinGen TOPMed gnomAD |
|
CA174222737 rs761521091 |
456 | R>L | No |
ClinGen TOPMed gnomAD |
|
CA174222732 rs937370565 |
457 | F>I | No |
ClinGen Ensembl |
|
CA370806293 rs1404743019 |
460 | V>I | No |
ClinGen TOPMed gnomAD |
|
CA4687672 rs770357144 |
461 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs748533193 CA4687671 |
461 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs777083260 CA4687670 |
462 | P>L | No |
ClinGen ExAC gnomAD |
|
rs369310263 CA174222727 |
462 | P>S | No |
ClinGen ESP TOPMed gnomAD |
|
rs1474101261 CA370806266 |
463 | Y>C | No |
ClinGen gnomAD |
|
rs768383163 CA4687669 |
465 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs768383163 CA370806249 |
465 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687666 rs144341265 |
468 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 468 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 469 | A>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs199649028 CA4687664 |
469 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
TCGA novel | 470 | R>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA370806222 rs1337467786 |
470 | R>Q | No |
ClinGen TOPMed gnomAD |
|
rs757138493 CA4687663 |
470 | R>W | No |
ClinGen ExAC gnomAD |
|
rs1269853646 CA370806218 |
471 | G>D | No |
ClinGen TOPMed gnomAD |
|
CA4687661 rs144761656 |
472 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA4687658 rs766547146 |
473 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687659 rs139952743 |
473 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs763129764 CA4687657 |
474 | P>L | No |
ClinGen ExAC gnomAD |
|
CA370806196 rs1418111383 |
475 | P>L | No |
ClinGen gnomAD |
|
rs1163297443 CA370806187 |
477 | P>T | No |
ClinGen gnomAD |
|
CA370806177 rs1464010638 |
478 | L>W | No |
ClinGen TOPMed |
|
rs773363494 CA4687656 |
479 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687655 rs765858051 COSM1456342 |
479 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs765858051 CA370806171 |
479 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4687654 rs202146006 |
480 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA4687653 rs777090174 |
482 | P>A | No |
ClinGen ExAC gnomAD |
|
CA370806156 rs777090174 |
482 | P>S | No |
ClinGen ExAC gnomAD |
|
CA370806136 rs768308708 |
485 | I>L | No |
ClinGen TOPMed gnomAD |
|
CA174222709 rs770115119 |
485 | I>M | No |
ClinGen gnomAD |
|
rs768308708 CA174222711 |
485 | I>V | No |
ClinGen TOPMed gnomAD |
|
rs760445599 CA4687651 |
486 | S>G | No |
ClinGen ExAC gnomAD |
|
rs1313103099 CA370806126 |
486 | S>R | No |
ClinGen TOPMed gnomAD |
|
rs546952156 CA4687650 |
487 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA370806124 rs546952156 |
487 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA370806111 rs1378043857 |
489 | E>K | No |
ClinGen gnomAD |
|
CA4687649 rs771701408 |
490 | E>* | No |
ClinGen ExAC gnomAD |
|
CA4687648 rs745405843 |
491 | L>M | No |
ClinGen ExAC gnomAD |
|
CA4687647 rs778354347 |
492 | D>G | No |
ClinGen ExAC gnomAD |
No associated diseases with Q9UPQ4
9 regional properties for Q9UPQ4
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | B-box-type zinc finger | 96 - 137 | IPR000315 |
domain | Zinc finger, RING-type | 21 - 61 | IPR001841 |
domain | B30.2/SPRY domain | 284 - 487 | IPR001870 |
domain | SPRY domain | 353 - 484 | IPR003877 |
domain | Butyrophylin-like, SPRY domain | 300 - 317 | IPR003879-1 |
domain | Butyrophylin-like, SPRY domain | 338 - 362 | IPR003879-2 |
domain | Butyrophylin-like, SPRY domain | 419 - 443 | IPR003879-3 |
domain | SPRY-associated | 301 - 352 | IPR006574 |
conserved_site | Zinc finger, RING-type, conserved site | 36 - 45 | IPR017907 |
Functions
Description | ||
---|---|---|
EC Number | 2.3.2.27 | Aminoacyltransferases |
Subcellular Localization |
|
|
PANTHER Family | ||
PANTHER Subfamily | ||
PANTHER Protein Class | ||
PANTHER Pathway Category | No pathway information available |
2 GO annotations of cellular component
Name | Definition |
---|---|
cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
Name | Definition |
---|---|
ubiquitin protein ligase activity | Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues. |
zinc ion binding | Binding to a zinc ion (Zn). |
6 GO annotations of biological process
Name | Definition |
---|---|
apoptotic process | A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. |
innate immune response | Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. |
negative regulation of mitotic cell cycle | Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle. |
positive regulation of apoptotic process | Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process. |
protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
suppression of viral release by host | A process in which a host organism stops, prevents or reduces the frequency, rate or extent of the release of a virus with which it is infected, from its cells. |
49 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q5E9G4 | TRIM10 | Tripartite motif-containing protein 10 | Bos taurus (Bovine) | PR |
Q2T9Z0 | TRIM17 | E3 ubiquitin-protein ligase TRIM17 | Bos taurus (Bovine) | PR |
E1BJS7 | TRIM71 | E3 ubiquitin-protein ligase TRIM71 | Bos taurus (Bovine) | PR |
Q7YRV4 | TRIM21 | E3 ubiquitin-protein ligase TRIM21 | Bos taurus (Bovine) | PR |
Q1PRL4 | TRIM71 | E3 ubiquitin-protein ligase TRIM71 | Gallus gallus (Chicken) | PR |
Q7YR32 | TRIM10 | Tripartite motif-containing protein 10 | Pan troglodytes (Chimpanzee) | PR |
Q9BTV5 | FSD1 | Fibronectin type III and SPRY domain-containing protein 1 | Homo sapiens (Human) | PR |
Q9UJV3 | MID2 | Probable E3 ubiquitin-protein ligase MID2 | Homo sapiens (Human) | PR |
P29590 | PML | Protein PML | Homo sapiens (Human) | PR |
Q9NQ86 | TRIM36 | E3 ubiquitin-protein ligase TRIM36 | Homo sapiens (Human) | PR |
Q86UV6 | TRIM74 | Tripartite motif-containing protein 74 | Homo sapiens (Human) | PR |
Q2Q1W2 | TRIM71 | E3 ubiquitin-protein ligase TRIM71 | Homo sapiens (Human) | PR |
Q9BXM9 | FSD1L | FSD1-like protein | Homo sapiens (Human) | PR |
Q9H2S5 | RNF39 | RING finger protein 39 | Homo sapiens (Human) | PR |
Q86UV7 | TRIM73 | Tripartite motif-containing protein 73 | Homo sapiens (Human) | PR |
Q86XT4 | TRIM50 | E3 ubiquitin-protein ligase TRIM50 | Homo sapiens (Human) | PR |
Q6ZMU5 | TRIM72 | Tripartite motif-containing protein 72 | Homo sapiens (Human) | PR |
Q9BZY9 | TRIM31 | E3 ubiquitin-protein ligase TRIM31 | Homo sapiens (Human) | PR |
Q9C029 | TRIM7 | E3 ubiquitin-protein ligase TRIM7 | Homo sapiens (Human) | PR |
O15553 | MEFV | Pyrin | Homo sapiens (Human) | SS |
A6NCK2 | TRIM43B | Tripartite motif-containing protein 43B | Homo sapiens (Human) | PR |
Q8N9V2 | TRIML1 | Probable E3 ubiquitin-protein ligase TRIML1 | Homo sapiens (Human) | PR |
P19474 | TRIM21 | E3 ubiquitin-protein ligase TRIM21 | Homo sapiens (Human) | PR |
Q14142 | TRIM14 | Tripartite motif-containing protein 14 | Homo sapiens (Human) | PR |
A6NK02 | TRIM75 | Tripartite motif-containing protein 75 | Homo sapiens (Human) | PR |
Q5EBN2 | TRIM61 | Putative tripartite motif-containing protein 61 | Homo sapiens (Human) | PR |
Q9WUH5 | Trim10 | Tripartite motif-containing protein 10 | Mus musculus (Mouse) | PR |
Q8BZT2 | Sh3rf2 | E3 ubiquitin-protein ligase SH3RF2 | Mus musculus (Mouse) | PR |
Q7TPM3 | Trim17 | E3 ubiquitin-protein ligase TRIM17 | Mus musculus (Mouse) | PR |
Q1XH17 | Trim72 | Tripartite motif-containing protein 72 | Mus musculus (Mouse) | PR |
Q60953 | Pml | Protein PML | Mus musculus (Mouse) | PR |
Q9JJ26 | Mefv | Pyrin | Mus musculus (Mouse) | SS |
Q99PQ1 | Trim12a | Tripartite motif-containing protein 12A | Mus musculus (Mouse) | PR |
Q61510 | Trim25 | E3 ubiquitin/ISG15 ligase TRIM25 | Mus musculus (Mouse) | PR |
Q810I2 | Trim50 | E3 ubiquitin-protein ligase TRIM50 | Mus musculus (Mouse) | PR |
Q1PSW8 | Trim71 | E3 ubiquitin-protein ligase TRIM71 | Mus musculus (Mouse) | PR |
Q3TL54 | Trim43a | Tripartite motif-containing protein 43A | Mus musculus (Mouse) | PR |
P86449 | Trim43c | Tripartite motif-containing protein 43C | Mus musculus (Mouse) | PR |
O77666 | TRIM26 | Tripartite motif-containing protein 26 | Sus scrofa (Pig) | PR |
O19085 | TRIM10 | Tripartite motif-containing protein 10 | Sus scrofa (Pig) | PR |
Q865W2 | TRIM50 | E3 ubiquitin-protein ligase TRIM50 | Sus scrofa (Pig) | PR |
Q920M2 | Rnf39 | RING finger protein 39 | Rattus norvegicus (Rat) | PR |
Q9JJ25 | Mefv | Pyrin | Rattus norvegicus (Rat) | SS |
A0JPQ4 | Trim72 | Tripartite motif-containing protein 72 | Rattus norvegicus (Rat) | PR |
Q810I1 | Trim50 | E3 ubiquitin-protein ligase TRIM50 | Rattus norvegicus (Rat) | PR |
D3ZVM4 | Trim71 | E3 ubiquitin-protein ligase TRIM71 | Rattus norvegicus (Rat) | PR |
F6QEU4 | trim71 | E3 ubiquitin-protein ligase TRIM71 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
Q640S6 | trim72 | Tripartite motif-containing protein 72 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
E7FAM5 | trim71 | E3 ubiquitin-protein ligase TRIM71 | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
10 | 20 | 30 | 40 | 50 | 60 |
MERSPDVSPG | PSRSFKEELL | CAVCYDPFRD | AVTLRCGHNF | CRGCVSRCWE | VQVSPTCPVC |
70 | 80 | 90 | 100 | 110 | 120 |
KDRASPADLR | TNHTLNNLVE | KLLREEAEGA | RWTSYRFSRV | CRLHRGQLSL | FCLEDKELLC |
130 | 140 | 150 | 160 | 170 | 180 |
CSCQADPRHQ | GHRVQPVKDT | AHDFRAKCRN | MEHALREKAK | AFWAMRRSYE | AIAKHNQVEA |
190 | 200 | 210 | 220 | 230 | 240 |
AWLEGRIRQE | FDKLREFLRV | EEQAILDAMA | EETRQKQLLA | DEKMKQLTEE | TEVLAHEIER |
250 | 260 | 270 | 280 | 290 | 300 |
LQMEMKEDDV | SFLMKHKSRK | RRLFCTMEPE | PVQPGMLIDV | CKYLGSLQYR | VWKKMLASVE |
310 | 320 | 330 | 340 | 350 | 360 |
SVPFSFDPNT | AAGWLSVSDD | LTSVTNHGYR | VQVENPERFS | SAPCLLGSRV | FSQGSHAWEV |
370 | 380 | 390 | 400 | 410 | 420 |
ALGGLQSWRV | GVVRVRQDSG | AEGHSHSCYH | DTRSGFWYVC | RTQGVEGDHC | VTSDPATSPL |
430 | 440 | 450 | 460 | 470 | 480 |
VLAIPRRLRV | ELECEEGELS | FYDAERHCHL | YTFHARFGEV | RPYFYLGGAR | GAGPPEPLRI |
490 | |||||
CPLHISVKEE | LDG |