Q9SI09
PR
Gene name |
XERICO (At2g04240, T23O15.13) |
Protein name |
Probable E3 ubiquitin-protein ligase XERICO |
Names |
RING-type E3 ubiquitin transferase XERICO |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G04240 |
EC number |
2.3.2.27: Aminoacyltransferases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9SI09
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9SI09-F1 | Predicted | AlphaFoldDB |
21 variants for Q9SI09
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH05245560 | 18 | L>V | No | 1000Genomes | |
| ENSVATH11008138 | 20 | N>H | No | 1000Genomes | |
| ENSVATH05245559 | 27 | I>M | No | 1000Genomes | |
| tmp_2_1462129_T_C | 59 | N>S | No | 1000Genomes | |
| ENSVATH11008137 | 60 | S>P | No | 1000Genomes | |
| ENSVATH01640000 | 65 | S>P | No | 1000Genomes | |
| ENSVATH01639999 | 69 | R>Q | No | 1000Genomes | |
| ENSVATH11008136 | 70 | V>I | No | 1000Genomes | |
| ENSVATH05245558 | 75 | S>N | No | 1000Genomes | |
| ENSVATH00205846 | 76 | Y>F | No | 1000Genomes | |
| ENSVATH00205845 | 86 | T>I | No | 1000Genomes | |
| ENSVATH11008135 | 89 | F>S | No | 1000Genomes | |
| tmp_2_1462011_C_A | 98 | Q>H | No | 1000Genomes | |
| ENSVATH05245557 | 99 | A>T | No | 1000Genomes | |
| tmp_2_1461957_G_C | 116 | I>M | No | 1000Genomes | |
| ENSVATH00205844 | 118 | K>E | No | 1000Genomes | |
| tmp_2_1461922_G_T | 128 | T>K | No | 1000Genomes | |
| tmp_2_1461877_A_G | 143 | L>S | No | 1000Genomes | |
| tmp_2_1461868_G_A | 146 | T>I | No | 1000Genomes | |
| ENSVATH11008032 | 153 | E>D | No | 1000Genomes | |
| ENSVATH11008033 | 153 | E>V | No | 1000Genomes |
No associated diseases with Q9SI09
4 regional properties for Q9SI09
Functions
| Description | ||
|---|---|---|
| EC Number | 2.3.2.27 | Aminoacyltransferases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| metal ion binding | Binding to a metal ion. |
| transferase activity | Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| abscisic acid biosynthetic process | The chemical reactions and pathways resulting in the formation of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid. |
| abscisic acid metabolic process | The chemical reactions and pathways involving abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid. |
| protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
| response to gibberellin | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus. |
| response to osmotic stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell. |
| response to salt stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. |
17 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9VE61 | CG7694 | E3 ubiquitin-protein ligase RNF181 homolog | Drosophila melanogaster (Fruit fly) | PR |
| O00237 | RNF103 | E3 ubiquitin-protein ligase RNF103 | Homo sapiens (Human) | PR |
| Q86Y13 | DZIP3 | E3 ubiquitin-protein ligase DZIP3 | Homo sapiens (Human) | PR |
| Q9Y3E7 | CHMP3 | Charged multivesicular body protein 3 | Homo sapiens (Human) | EV |
| Q9R1W3 | Rnf103 | E3 ubiquitin-protein ligase RNF103 | Mus musculus (Mouse) | PR |
| Q9EPZ8 | Rnf103 | E3 ubiquitin-protein ligase RNF103 | Rattus norvegicus (Rat) | PR |
| Q9ZV51 | ATL56 | RING-H2 finger protein ATL56 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SKK8 | ATL22 | RING-H2 finger protein ATL22 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0CH02 | ATL21B | Putative RING-H2 finger protein ATL21B | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0CH01 | ATL21A | Putative RING-H2 finger protein ATL21A | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GXF8 | SGR9 | E3 ubiquitin-protein ligase SGR9, amyloplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LUZ9 | ATL63 | RING-H2 finger protein ATL63 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O22255 | ATL64 | RING-H2 finger protein ATL64 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GYT9 | SIS3 | E3 ubiquitin-protein ligase SIS3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8LGA5 | ATL31 | E3 ubiquitin-protein ligase ATL31 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8RXX9 | ATL6 | E3 ubiquitin-protein ligase ATL6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZJ6 | ATL5 | RING-H2 finger protein ATL5 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGLSSLPGPS | EGMLCVILVN | TALSISIVKG | IVRSFLGIVG | ISLSPSSSSP | SSVTVSSENS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| STSESFDFRV | CQPESYLEEF | RNRTPTLRFE | SLCRCKKQAD | NECSVCLSKF | QGDSEINKLK |
| 130 | 140 | 150 | 160 | ||
| CGHLFHKTCL | EKWIDYWNIT | CPLCRTPLVV | VPEDHQLSSN | VW |