Q9NX02
Gene name |
NLRP2 (NALP2, NBS1, PAN1, PYPAF2) |
Protein name |
NACHT, LRR and PYD domains-containing protein 2 |
Names |
Nucleotide-binding site protein 1, PYRIN domain and NACHT domain-containing protein 1, PYRIN-containing APAF1-like protein 2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:55655 |
EC number |
|
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

1 structures for Q9NX02
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
AF-Q9NX02-F1 | Predicted | AlphaFoldDB |
1153 variants for Q9NX02
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
rs201859308 CA310058802 |
3 | S>F | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs142463014 CA407865093 |
4 | S>* | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs142463014 COSM1641234 RCV000959581 CA310058806 |
4 | S>L | large_intestine stomach [Cosmic] | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen cosmic curated ClinVar dbSNP |
CA310058822 rs371167610 |
5 | A>E | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310058824 rs371167610 |
5 | A>V | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310058833 rs753371923 |
6 | Q>H | No |
ExAC ClinGen |
|
CA310058836 rs754873052 |
7 | M>K | No |
ExAC gnomAD ClinGen |
|
rs1568462611 CA407865107 |
7 | M>V | No |
Ensembl ClinGen |
|
CA407865128 rs1270095746 |
10 | N>D | No |
ClinGen TOPMed gnomAD |
|
CA310058864 rs765131798 |
10 | N>S | No |
ExAC TOPMed ClinGen |
|
CA310058871 rs374086849 |
13 | A>G | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310058875 rs758172743 |
19 | S>I | No |
ExAC gnomAD ClinGen |
|
CA407865194 rs1207027884 |
20 | Q>* | No |
TOPMed ClinGen |
|
TCGA novel | 23 | L>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs75678776 CA310058880 |
24 | S>R | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs1393685920 CA407865237 |
25 | K>N | No |
gnomAD ClinGen |
|
rs1299816566 CA407865231 |
25 | K>Q | No |
gnomAD ClinGen |
|
CA407865235 rs1374681097 |
25 | K>R | No |
gnomAD ClinGen |
|
CA407865249 rs1285934690 |
27 | K>* | No |
TOPMed ClinGen |
|
rs146524467 CA310058884 |
27 | K>R | No |
ESP ClinGen |
|
rs948891300 CA310058897 |
28 | Y>C | No |
TOPMed ClinGen |
|
rs757511521 CA310058903 |
29 | L>M | No |
ExAC gnomAD ClinGen |
|
rs775714992 CA310058917 |
31 | T>M | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310058930 rs770033217 |
32 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA407865280 rs770033217 |
32 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA310058943 rs755501836 |
33 | F>L | No |
Ensembl ClinGen |
|
CA407865290 rs1207162274 |
34 | S>P | No |
gnomAD ClinGen |
|
CA310058974 rs768837190 |
35 | L>P | No |
ExAC gnomAD ClinGen |
|
CA407865304 rs1568462945 |
36 | A>V | No |
ClinGen Ensembl |
|
CA407865306 rs1602294417 |
37 | H>D | No |
Ensembl ClinGen |
|
CA310058986 TCGA novel rs367922223 |
37 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ESP ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA310058992 rs760197573 |
38 | E>* | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407865316 rs1446138202 |
38 | E>D | No |
ClinGen gnomAD |
|
CA310058991 rs760197573 |
38 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA310058996 rs776308630 |
40 | Q>* | No |
ExAC gnomAD ClinGen |
|
TCGA novel | 41 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs759028823 CA310059007 |
42 | I>F | No |
ClinGen ExAC gnomAD |
|
rs759028823 CA407865340 |
42 | I>V | No |
ClinGen ExAC gnomAD |
|
rs752623275 CA310059012 |
43 | P>L | No |
ExAC gnomAD ClinGen |
|
rs763736912 CA310059025 CA310059017 |
44 | H>Q | No |
ExAC gnomAD ClinGen |
|
rs758356399 CA310059013 |
44 | H>Y | No |
ExAC gnomAD ClinGen |
|
CA310059036 rs757380266 |
48 | D>E | No |
ExAC gnomAD ClinGen |
|
TCGA novel | 50 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310059048 rs746141394 |
51 | D>G | No |
ExAC gnomAD ClinGen |
|
rs756248472 CA310059051 |
55 | L>V | No |
ExAC gnomAD ClinGen |
|
CA310059058 rs17853912 |
58 | I>V | No |
Ensembl ClinGen |
|
CA310059064 rs150097185 |
59 | L>F | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs779109200 CA310059079 |
61 | T>I | No |
ExAC gnomAD ClinGen |
|
rs1602295008 CA407865470 |
62 | H>R | No |
Ensembl ClinGen |
|
rs748517251 CA310059084 |
63 | C>Y | No |
ExAC gnomAD ClinGen |
|
rs374722220 CA310059089 |
64 | D>N | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310059094 rs776255691 |
65 | S>N | No |
ExAC gnomAD ClinGen |
|
rs769222742 CA310059096 |
66 | Y>* | No |
ExAC gnomAD ClinGen |
|
CA310059095 rs759248475 |
66 | Y>C | No |
ExAC gnomAD ClinGen |
|
rs774992658 CA310059097 |
67 | W>* | No |
ExAC gnomAD ClinGen |
|
rs1291202332 CA407865508 |
67 | W>C | No |
TOPMed ClinGen |
|
rs1431453132 CA407865503 |
67 | W>G | No |
gnomAD ClinGen |
|
rs774992658 CA407865505 |
67 | W>S | No |
ExAC gnomAD ClinGen |
|
CA407865511 rs1602295207 |
68 | V>L | No |
Ensembl ClinGen |
|
rs1346046263 CA407865538 |
71 | A>G | No |
gnomAD ClinGen |
|
rs555530999 CA310059100 |
71 | A>S | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA407865547 rs1296793060 |
73 | L>F | No |
gnomAD ClinGen |
|
CA310059112 rs751490814 |
73 | L>H | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407865557 rs750606144 |
74 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA310059134 rs767478446 |
74 | Q>L | No |
ExAC gnomAD ClinGen |
|
rs756419840 CA310059146 |
75 | V>A | No |
ExAC gnomAD ClinGen |
|
CA407865570 rs1317192396 |
76 | F>L | No |
gnomAD ClinGen |
|
CA407865584 rs1297089845 |
78 | K>R | No |
TOPMed ClinGen |
|
CA310059180 rs780234149 |
79 | M>I | No |
ExAC gnomAD ClinGen |
|
rs753983866 CA407865597 |
80 | H>D | No |
ExAC TOPMed gnomAD ClinGen |
|
RCV000089318 rs199475706 CA230044 |
80 | H>P | No |
Ensembl ClinGen ClinVar dbSNP |
|
CA407865601 rs1351601258 |
80 | H>Q | No |
TOPMed ClinGen |
|
rs753983866 CA310059184 |
80 | H>Y | No |
ExAC TOPMed gnomAD ClinGen |
|
rs755054890 CA407865602 |
81 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs138445777 CA310059195 |
81 | R>Q | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs1005235143 CA310059208 |
82 | M>I | No |
TOPMed gnomAD ClinGen |
|
CA407865608 rs1172108287 |
82 | M>K | No |
ClinGen gnomAD |
|
CA310059205 rs748665449 |
82 | M>V | No |
ClinGen ExAC gnomAD |
|
rs1291807896 CA407865624 |
84 | L>P | No |
ClinGen Ensembl |
|
rs1425708787 CA407865637 |
86 | E>G | No |
ClinGen gnomAD |
|
TCGA novel | 88 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310059220 rs945026463 |
89 | K>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
TOPMed gnomAD ClinGen NCI-TCGA |
CA407865657 rs945026463 |
89 | K>R | No |
TOPMed gnomAD ClinGen |
|
rs1433643692 CA407865666 |
90 | D>E | No |
gnomAD ClinGen |
|
CA310059223 rs778111020 |
90 | D>V | No |
ClinGen ExAC gnomAD |
|
CA407865675 rs1273790906 |
91 | E>D | No |
gnomAD ClinGen |
|
CA407865678 rs1478246873 |
92 | V>I | No |
TOPMed ClinGen |
|
rs1042459416 CA310059241 |
94 | E>K | No |
TOPMed gnomAD ClinGen |
|
CA310093243 rs778409897 |
95 | A>G | No |
ExAC gnomAD ClinGen |
|
rs149284049 CA310093246 |
96 | A>T | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310093256 rs150872882 |
98 | K>E | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs777429529 CA310093262 |
100 | F>L | No |
ExAC gnomAD ClinGen |
|
rs746889855 CA310093264 |
101 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770791551 CA310093279 |
102 | K>* | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310093270 rs770791551 |
102 | K>E | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310093285 COSM226398 rs527789643 |
103 | R>K | NS [Cosmic] | No |
1000Genomes ExAC gnomAD ClinGen cosmic curated |
rs779958010 CA310093293 |
104 | K>M | No |
Ensembl ClinGen |
|
CA407423012 rs2217659 |
104 | K>N | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310093306 rs201724086 |
105 | P>L | No |
ExAC gnomAD ClinGen |
|
TCGA novel | 106 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1265392400 CA407423027 |
106 | L>V | No |
gnomAD ClinGen |
|
CA310093341 rs777890352 |
108 | L>S | No |
ExAC TOPMed gnomAD ClinGen |
|
TCGA novel | 111 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310097342 rs771976849 |
111 | T>R | No |
ExAC gnomAD ClinGen |
|
rs1053413016 CA310097334 |
111 | T>S | No |
ClinGen TOPMed gnomAD |
|
COSM1001335 CA310097364 rs747421028 |
112 | R>Q | endometrium Variant assessed as Somatic; 4.686e-05 impact. [Cosmic, NCI-TCGA] | No |
ExAC gnomAD ClinGen cosmic curated NCI-TCGA |
rs199915061 CA310097347 |
112 | R>W | No |
TOPMed gnomAD ClinGen |
|
TCGA novel | 114 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310097373 COSM475287 rs771601737 |
115 | R>* | kidney Variant assessed as Somatic; 0.0 impact. breast [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA310097380 rs777322338 |
115 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC gnomAD ClinGen NCI-TCGA |
VAR_084172 | 115 | R>del | found in patients with female infertility; unknown pathological significance [UniProt] | No | UniProt |
CA310097389 rs759959964 |
116 | P>Q | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310097398 rs761533100 |
118 | L>V | No |
ExAC gnomAD ClinGen |
|
CA310097408 COSM475288 rs368936931 |
120 | V>M | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ESP ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
rs766281650 CA310097431 CA407424153 |
121 | D>E | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1380006846 CA407424132 |
121 | D>G | No |
gnomAD ClinGen |
|
CA407424123 rs201293188 |
121 | D>H | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310097419 rs201293188 |
121 | D>N | No |
ExAC TOPMed gnomAD ClinGen |
|
rs753829412 CA310097438 |
122 | E>D | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407424169 rs1165462336 |
122 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1403071710 CA407424195 |
123 | M>T | No |
ClinGen gnomAD |
|
rs1170340836 CA407424214 |
125 | E>K | No |
TOPMed ClinGen |
|
rs778681431 CA310097481 COSM383245 |
126 | R>C | lung pancreas [Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated |
rs373538812 CA310097487 |
126 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ESP ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA310097490 rs144821238 |
131 | A>V | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs368082357 CA310097492 |
132 | Q>L | No |
ClinGen ExAC gnomAD |
|
rs145145515 | 133 | A>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
CA407424408 rs1469320123 |
133 | A>T | No |
gnomAD ClinGen |
|
rs201044240 CA310101881 |
133 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs1217753325 CA407426494 |
134 | F>L | No |
gnomAD ClinGen |
|
CA310101895 rs757568418 |
135 | T>A | No |
ExAC TOPMed gnomAD ClinGen |
|
rs781374502 CA310101901 |
136 | E>D | No |
ExAC gnomAD ClinGen |
|
TCGA novel | 136 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310101912 rs750563035 |
137 | T>M | No |
ExAC TOPMed gnomAD ClinGen |
|
rs750563035 CA310101904 |
137 | T>R | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407426664 rs1392839713 |
139 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA310101924 rs202133050 |
141 | V>D | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1453603498 CA407426752 |
143 | C>S | No |
ClinGen gnomAD |
|
rs768996521 CA310101927 |
144 | L>Q | No |
ExAC gnomAD ClinGen |
|
CA310101929 rs779156698 |
145 | G>R | No |
ExAC gnomAD ClinGen |
|
CA407426779 rs779156698 |
145 | G>S | No |
ExAC gnomAD ClinGen |
|
CA310101954 rs770598840 |
148 | V>A | No |
ExAC gnomAD ClinGen |
|
rs746613108 CA310101940 |
148 | V>F | No |
ExAC gnomAD ClinGen |
|
CA407426876 rs1370462989 |
150 | K>N | No |
ClinGen gnomAD |
|
TCGA novel | 152 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA407426897 rs1241342536 |
153 | K>M | No |
TOPMed gnomAD ClinGen |
|
rs1241342536 CA407426896 |
153 | K>R | No |
TOPMed gnomAD ClinGen |
|
rs554886588 CA310101972 |
154 | P>A | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs554886588 CA310101975 |
154 | P>S | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs1229558300 CA407428269 |
155 | D>G | No |
gnomAD ClinGen |
|
CA310101985 rs775496594 |
155 | D>N | No |
ExAC gnomAD ClinGen |
|
rs768508889 CA310102427 |
156 | K>E | No |
ExAC gnomAD ClinGen |
|
CA310102428 rs200480716 |
156 | K>N | No |
Ensembl ClinGen |
|
CA407428295 rs1185703386 |
157 | D>N | No |
gnomAD ClinGen |
|
CA310102429 rs932788275 |
158 | N>D | No |
TOPMed gnomAD ClinGen |
|
COSM1001337 rs774470986 CA310102439 |
158 | N>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
TCGA novel | 159 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs368735684 CA310102451 |
161 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA310102464 rs760819538 |
162 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA310102466 rs888738029 |
163 | I>V | No |
TOPMed ClinGen |
|
CA310102478 rs753891788 COSM1001338 |
166 | T>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
rs1218667873 CA407428587 |
167 | K>N | No |
gnomAD ClinGen |
|
CA310102491 rs765706569 |
167 | K>R | No |
ExAC gnomAD ClinGen |
|
CA310102492 rs562147630 |
168 | F>L | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs778117336 CA310102501 |
169 | R>Q | No |
ExAC gnomAD ClinGen |
|
rs527958520 CA310102500 |
169 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
1000Genomes ExAC gnomAD ClinGen NCI-TCGA |
rs866845143 CA310102504 |
170 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
Ensembl ClinGen NCI-TCGA |
CA310102506 rs1020226503 |
170 | E>V | No |
Ensembl ClinGen |
|
CA407428677 rs1421876584 |
171 | M>I | No |
TOPMed ClinGen |
|
CA407428687 rs1256434826 |
172 | W>R | No |
gnomAD ClinGen |
|
TCGA novel | 173 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs745471188 CA310102512 |
173 | K>N | No |
ExAC gnomAD ClinGen |
|
TCGA novel CA310102517 rs755745718 |
174 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
CA310102518 rs779579364 |
174 | S>T | No |
ExAC gnomAD ClinGen |
|
VAR_084586 | 175 | W>C | found in patients with female infertility; unknown pathological significance [UniProt] | No | UniProt |
rs748716732 CA310102519 |
175 | W>R | No |
ExAC gnomAD ClinGen |
|
rs768331569 CA310102521 |
176 | P>S | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1417645862 CA407428822 |
177 | G>A | No |
TOPMed gnomAD ClinGen |
|
rs1004466322 CA310102523 |
177 | G>R | No |
TOPMed ClinGen |
|
CA407428820 rs1417645862 |
177 | G>V | No |
TOPMed gnomAD ClinGen |
|
CA310102525 rs774425989 |
178 | D>G | No |
ExAC gnomAD ClinGen |
|
CA310102532 rs771933134 |
179 | S>R | No |
ExAC gnomAD ClinGen |
|
rs1312839452 CA407428903 |
180 | K>R | No |
gnomAD ClinGen |
|
rs760908668 CA310102538 |
182 | V>F | No |
ExAC gnomAD ClinGen |
|
rs760908668 CA310102536 |
182 | V>I | No |
ExAC gnomAD ClinGen |
|
rs1254809655 CA407428969 |
183 | Q>* | No |
TOPMed gnomAD ClinGen |
|
rs776957163 CA310102549 |
183 | Q>R | No |
ExAC gnomAD ClinGen |
|
CA407429006 rs1319598810 |
184 | V>I | No |
TOPMed ClinGen |
|
CA310102569 rs753140463 |
185 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC gnomAD ClinGen NCI-TCGA |
CA310102560 rs564458116 |
185 | M>T | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs10221459 CA310102594 |
187 | E>G | No |
Ensembl ClinGen |
|
rs763466839 CA310102599 COSM1712843 |
188 | R>K | skin [Cosmic] | No |
ExAC ClinGen cosmic curated |
CA310102607 rs372036860 CA407429130 |
189 | Y>* | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA407429117 rs1568492456 |
189 | Y>H | No |
Ensembl ClinGen |
|
TCGA novel | 192 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs779551457 CA310102638 |
192 | L>P | No |
ExAC gnomAD ClinGen |
|
rs375069245 CA310102633 |
192 | L>V | No |
ESP ExAC gnomAD ClinGen |
|
rs753586405 CA310102642 |
193 | I>M | No |
ExAC gnomAD ClinGen |
|
rs1240492801 CA407429242 |
194 | P>L | No |
TOPMed gnomAD ClinGen |
|
rs1388504938 CA407429232 |
194 | P>S | No |
TOPMed ClinGen |
|
CA310102678 rs10403648 |
195 | F>L | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310102705 rs191789242 |
197 | N>S | No |
1000Genomes ExAC gnomAD ClinGen |
|
rs1374203928 CA407429317 |
198 | P>T | No |
gnomAD ClinGen |
|
CA310102717 rs746756441 |
199 | R>G | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310102719 rs145770839 |
199 | R>S | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs1189891932 CA407429405 |
203 | G>A | No |
TOPMed ClinGen |
|
rs368045816 CA310102728 CA310102727 |
203 | G>R | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA407429448 rs1302495216 |
205 | F>L | No |
gnomAD ClinGen |
|
TCGA novel | 205 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1205436263 CA407429456 |
206 | S>A | No |
TOPMed ClinGen |
|
CA310102735 rs764556038 COSM3797532 |
206 | S>L | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
rs139279089 CA310102760 |
207 | Y>* | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs1225444285 CA407429483 |
207 | Y>F | No |
gnomAD ClinGen |
|
CA407429494 rs1568492856 |
208 | T>A | No |
Ensembl ClinGen |
|
rs753374250 CA310102777 |
208 | T>M | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310102788 rs754698461 |
209 | V>A | No |
ExAC gnomAD ClinGen |
|
rs752221005 CA310102796 |
212 | Y>* | No |
ClinGen ExAC gnomAD |
|
CA407429600 rs1325853669 |
213 | G>A | No |
TOPMed gnomAD ClinGen |
|
CA407429633 rs1308341815 |
215 | A>P | No |
TOPMed ClinGen |
|
CA407429630 rs1308341815 |
215 | A>T | No |
TOPMed ClinGen |
|
CA407429664 rs1224889392 |
217 | L>F | No |
gnomAD ClinGen |
|
TCGA novel | 220 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA407429730 rs17699678 |
221 | T>K | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs17699678 CA310102824 VAR_053616 |
221 | T>M | found in patients with female infertility; unknown pathological significance [UniProt] | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen UniProt dbSNP |
rs17699678 CA310102814 |
221 | T>R | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA407429747 rs1407837559 |
222 | L>P | No |
gnomAD ClinGen |
|
CA407429779 rs1164791111 |
224 | Q>H | No |
gnomAD ClinGen |
|
rs73607913 CA310102831 |
227 | M>L | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310102832 rs746044131 |
227 | M>T | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407429877 rs1174612376 |
229 | D>H | No |
TOPMed ClinGen |
|
CA407429914 rs1277726459 |
230 | W>C | No |
gnomAD ClinGen |
|
rs775731182 CA310102842 |
230 | W>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC gnomAD ClinGen NCI-TCGA |
rs531856312 CA310102846 |
231 | A>S | No |
ExAC TOPMed gnomAD ClinGen |
|
rs768838945 CA310102853 |
234 | N>D | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1181902923 CA407429980 |
234 | N>S | No |
TOPMed ClinGen |
|
rs1258916220 CA407429997 |
235 | L>F | No |
gnomAD ClinGen |
|
rs1258916220 CA407429994 |
235 | L>V | No |
gnomAD ClinGen |
|
rs1482545954 CA407430029 |
237 | H>Y | No |
TOPMed ClinGen |
|
CA407430085 rs1459391722 |
239 | F>L | No |
TOPMed gnomAD ClinGen |
|
rs374933929 CA310102905 |
240 | K>I | No |
ClinGen ESP ExAC gnomAD |
|
CA407430117 rs1201767704 |
241 | Y>C | No |
TOPMed ClinGen |
|
COSM193160 CA407430145 rs1473452983 COSM193161 |
242 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs764957561 CA310102971 |
244 | Y>H | No |
ExAC gnomAD ClinGen |
|
CA407430179 rs1428455710 |
244 | Y>S | No |
TOPMed gnomAD ClinGen |
|
CA310102981 rs369097456 |
245 | L>F | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA407430194 rs1568493427 |
245 | L>H | No |
Ensembl ClinGen |
|
CA310102976 rs369097456 |
245 | L>I | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310102982 rs896037555 |
247 | C>G | No |
TOPMed ClinGen |
|
rs143026800 CA310102986 |
248 | R>W | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs1411464041 CA407430246 |
249 | E>Q | No |
gnomAD ClinGen |
|
CA407430260 rs1396784874 |
250 | L>F | No |
TOPMed ClinGen |
|
rs751397169 CA310102993 |
252 | R>C | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310102996 rs201496089 |
252 | R>H | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310103010 rs201496089 |
252 | R>L | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs1295028324 CA407430291 |
253 | L>M | No |
gnomAD ClinGen |
|
rs745632440 CA310103018 |
254 | G>S | No |
ExAC gnomAD ClinGen |
|
CA310103026 rs375922261 |
255 | P>L | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
TCGA novel | 255 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA407430316 rs375922261 |
255 | P>R | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
TCGA novel | 255 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs556364017 CA310103034 |
257 | S>G | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
VAR_084587 CA407430348 rs1194295774 |
258 | F>S | found in patients with female infertility; unknown pathological significance [UniProt] | No |
gnomAD ClinGen UniProt dbSNP |
rs1173226121 CA407430343 |
258 | F>V | No |
gnomAD ClinGen |
|
CA310103037 rs768559468 |
260 | E>K | No |
ExAC gnomAD ClinGen |
|
rs772600256 CA310103047 |
263 | F>L | No |
ExAC gnomAD ClinGen |
|
CA407430405 rs1254940930 |
266 | W>C | No |
TOPMed ClinGen |
|
CA310103056 rs761103070 |
268 | E>K | No |
ExAC gnomAD ClinGen |
|
CA407430424 rs1186534356 |
269 | L>S | No |
gnomAD ClinGen |
|
rs1466232547 CA407430430 |
270 | Q>K | No |
TOPMed ClinGen |
|
rs1423903872 CA407430433 |
270 | Q>P | No |
gnomAD ClinGen |
|
CA310103057 rs555603201 |
271 | D>N | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs955842758 CA310103058 |
272 | D>H | No |
TOPMed ClinGen |
|
rs1165778965 CA407430458 |
273 | I>M | No |
gnomAD ClinGen |
|
CA407430466 rs138041237 |
275 | H>D | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs763466159 CA310103067 |
275 | H>L | No |
ExAC TOPMed gnomAD ClinGen |
|
rs138041237 CA310103064 |
275 | H>N | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA407430467 rs763466159 |
275 | H>P | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310103066 rs763466159 |
275 | H>R | No |
ExAC TOPMed gnomAD ClinGen |
|
rs138041237 CA310103065 |
275 | H>Y | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310103069 rs756761757 |
276 | I>V | No |
ExAC ClinGen |
|
rs767468742 CA310103079 |
277 | L>P | No |
ExAC gnomAD ClinGen |
|
rs1373495961 CA407430477 |
277 | L>V | No |
gnomAD ClinGen |
|
rs1340084364 CA407430485 |
278 | A>V | No |
ClinGen TOPMed |
|
rs750419261 CA310103094 |
279 | Q>* | No |
ExAC gnomAD ClinGen |
|
CA310103095 rs76399676 |
281 | R>G | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA407430500 rs200257622 |
281 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs200257622 CA310103100 |
281 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA310103096 rs76399676 |
281 | R>W | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310103131 rs779043525 |
282 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1261888009 CA407430519 |
284 | L>* | No |
gnomAD ClinGen |
|
rs147098165 CA310103170 CA310103168 |
285 | F>L | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs771360716 CA310103174 |
286 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA407430537 rs1367501999 |
287 | I>T | No |
TOPMed ClinGen |
|
CA310103177 rs777161045 |
288 | D>E | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310103184 rs138537360 |
289 | G>S | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs1298711482 CA407430553 |
290 | F>L | No |
TOPMed gnomAD ClinGen |
|
rs1387291180 CA407430560 |
291 | D>N | No |
gnomAD ClinGen |
|
CA310103188 rs773925733 |
292 | E>D | No |
ExAC gnomAD ClinGen |
|
CA310103195 rs761373612 |
293 | L>P | No |
ExAC gnomAD ClinGen |
|
rs1463444751 CA407430590 COSM1641235 |
295 | A>V | stomach [Cosmic] | No |
TOPMed ClinGen cosmic curated |
rs766120038 CA407430592 |
296 | A>S | No |
ExAC TOPMed gnomAD ClinGen |
|
rs766120038 CA310103218 |
296 | A>T | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407430597 rs564394457 |
297 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA310103245 rs754777768 |
297 | P>R | No |
ExAC gnomAD ClinGen |
|
rs564394457 CA310103243 |
297 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1568494356 CA407430605 |
298 | G>A | No |
Ensembl ClinGen |
|
rs779179826 CA310103246 |
299 | A>S | No |
ExAC gnomAD ClinGen |
|
rs149627959 CA310103247 |
299 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs778010743 CA310103255 |
300 | L>P | No |
ExAC gnomAD ClinGen |
|
rs747472514 CA310103261 |
301 | I>L | No |
ExAC gnomAD ClinGen |
|
rs144397371 CA310103267 |
301 | I>M | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310103288 rs761378450 |
302 | E>G | No |
ClinGen ExAC gnomAD |
|
rs3745904 CA310103278 |
302 | E>K | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs3745904 CA310103285 VAR_053617 |
302 | E>Q | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen UniProt dbSNP |
|
rs1159789020 CA407430627 |
303 | D>A | No |
gnomAD ClinGen |
|
TCGA novel | 305 | C>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA407430646 rs370946962 |
305 | C>W | No |
ESP gnomAD ClinGen |
|
CA407430642 rs1451739013 |
305 | C>Y | No |
TOPMed gnomAD ClinGen |
|
rs188819279 CA310103310 |
306 | G>R | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs772739635 CA310103314 |
307 | D>G | No |
ExAC gnomAD ClinGen |
|
CA407430717 rs1390269119 |
309 | E>D | No |
TOPMed ClinGen |
|
rs760216362 CA310103356 |
309 | E>G | No |
ExAC gnomAD ClinGen |
|
CA310103342 rs865812246 |
309 | E>K | No |
ClinGen Ensembl |
|
TCGA novel | 310 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA407430757 rs766281794 |
311 | K>N | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407430748 rs1447929172 |
311 | K>R | No |
TOPMed gnomAD ClinGen |
|
CA407430746 rs1447929172 |
311 | K>T | No |
TOPMed gnomAD ClinGen |
|
CA407430760 rs1334441094 |
312 | K>Q | No |
ClinGen TOPMed gnomAD |
|
CA407430768 rs1194518302 |
312 | K>T | No |
ClinGen TOPMed |
|
CA310103365 rs141427711 |
313 | P>L | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA407430784 rs141427711 |
313 | P>Q | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310103360 rs753776748 |
313 | P>T | No |
ExAC gnomAD ClinGen |
|
rs1270844279 CA407430811 |
315 | P>L | No |
gnomAD ClinGen |
|
CA310103378 rs752904721 |
315 | P>S | No |
ExAC gnomAD ClinGen |
|
CA407430814 rs561774583 |
316 | V>F | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA310103382 rs561774583 |
316 | V>I | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA310103388 rs144092754 |
317 | L>F | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
TCGA novel | 319 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1418725795 CA407430845 |
321 | L>W | No |
gnomAD ClinGen |
|
CA310103407 rs756436723 |
323 | N>K | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1163089244 CA407430861 |
324 | R>G | No |
ClinGen gnomAD |
|
rs772899546 CA310103416 |
325 | V>E | No |
ExAC TOPMed gnomAD ClinGen |
|
rs747795316 CA310103414 |
325 | V>L | No |
ExAC TOPMed gnomAD ClinGen |
|
rs747795316 CA310103415 |
325 | V>M | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310103418 rs1019187055 |
326 | M>V | No |
TOPMed gnomAD ClinGen |
|
rs1394773480 CA407430885 |
327 | L>S | No |
gnomAD ClinGen |
|
rs746508494 CA310103424 |
328 | P>S | No |
ExAC gnomAD ClinGen |
|
rs776561473 CA310103436 |
329 | K>R | No |
ExAC TOPMed gnomAD ClinGen |
|
rs765030338 CA310103457 |
330 | A>T | No |
ExAC gnomAD ClinGen |
|
CA310103488 rs200189881 |
331 | A>S | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs200189881 CA310103482 |
331 | A>T | Variant assessed as Somatic; 4.624e-05 impact. [NCI-TCGA] | No |
ESP ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs377520886 CA310103493 |
331 | A>V | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310103517 rs756602998 |
336 | T>A | No |
ExAC gnomAD ClinGen |
|
rs780650039 CA310103519 |
336 | T>M | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310103570 rs149735961 |
337 | R>Q | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs755393462 CA310103562 |
337 | R>W | No |
ExAC TOPMed gnomAD ClinGen |
|
rs145646456 CA310103572 |
338 | P>S | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs1461765066 CA407430945 |
339 | R>T | No |
gnomAD ClinGen |
|
CA407430951 rs1314049182 |
340 | A>T | No |
gnomAD ClinGen |
|
rs1439486499 CA407430971 |
343 | D>G | No |
TOPMed ClinGen |
|
CA407430981 rs745776240 |
345 | R>G | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310103585 rs1045014130 |
345 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA310103584 rs745776240 |
345 | R>W | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407430984 rs1161160221 |
346 | I>L | No |
ClinGen TOPMed |
|
CA310103586 rs769589997 |
347 | L>V | No |
ExAC gnomAD ClinGen |
|
CA310103588 rs775549835 |
348 | A>T | No |
ExAC gnomAD ClinGen |
|
rs1297232695 CA407430999 |
348 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
TOPMed gnomAD ClinGen NCI-TCGA |
CA407431004 rs148817929 |
349 | E>K | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310103589 rs148817929 |
349 | E>Q | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310103596 rs774648884 |
350 | E>D | No |
ExAC gnomAD ClinGen |
|
rs142528551 CA310103591 |
350 | E>Q | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs1238183293 CA407431034 |
351 | P>A | No |
TOPMed ClinGen |
|
CA310103600 rs762141241 COSM1526410 |
351 | P>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
rs762141241 CA407431038 |
351 | P>Q | No |
ExAC TOPMed gnomAD ClinGen |
|
rs147585490 CA310103623 |
352 | I>S | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs760857427 CA310103619 |
352 | I>V | No |
ExAC gnomAD ClinGen |
|
CA407431062 rs1417580166 |
353 | Y>D | No |
gnomAD ClinGen |
|
rs1328910586 CA407431066 |
353 | Y>S | No |
TOPMed ClinGen |
|
rs1221767114 CA407431086 |
354 | I>M | No |
TOPMed ClinGen |
|
CA310103642 rs61735077 RCV000955044 |
354 | I>V | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen ClinVar dbSNP |
|
CA310103655 rs374172530 |
356 | V>L | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA407431104 rs374172530 |
356 | V>M | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs145871372 CA310103702 |
358 | G>A | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310103664 rs868858851 |
358 | G>S | No |
Ensembl ClinGen |
|
rs145871372 CA310103712 |
358 | G>V | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310103716 rs62124644 RCV000958239 |
359 | F>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA310103747 rs779856359 |
363 | D>N | No |
ExAC gnomAD ClinGen |
|
CA310103752 VAR_025011 rs4306647 |
364 | R>K | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen UniProt dbSNP |
|
rs774311651 CA310103755 |
366 | A>P | No |
ExAC gnomAD ClinGen |
|
rs1240586728 CA407431401 |
368 | F>C | No |
gnomAD ClinGen |
|
CA310103764 rs773539974 |
368 | F>L | No |
ClinGen ExAC |
|
rs1189789284 CA407431395 |
368 | F>L | No |
TOPMed ClinGen |
|
TCGA novel | 369 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1194491371 CA407431430 |
371 | H>D | No |
gnomAD ClinGen |
|
rs1194491371 CA407431428 |
371 | H>N | No |
gnomAD ClinGen |
|
TCGA novel | 371 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA407431442 rs1464831470 |
372 | F>V | No |
TOPMed ClinGen |
|
rs3826883 CA310103796 CA310103784 |
374 | D>E | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA407431480 rs766483874 |
374 | D>G | No |
ClinGen ExAC gnomAD |
|
rs766483874 CA310103771 |
374 | D>V | No |
ClinGen ExAC gnomAD |
|
CA310103823 rs971948724 |
375 | E>G | No |
TOPMed ClinGen |
|
CA310103816 rs753026157 |
375 | E>K | No |
ExAC gnomAD ClinGen |
|
rs149347145 CA310103824 |
377 | Q>* | No |
ESP ExAC ClinGen |
|
CA310103825 rs146314922 |
377 | Q>R | No |
ESP ClinGen |
|
CA310103833 rs557761553 |
378 | A>D | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA407431609 rs557761553 |
378 | A>G | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA407431612 COSM1001340 rs557761553 |
378 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
1000Genomes ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
rs755516987 CA310103850 |
379 | M>I | No |
ExAC TOPMed gnomAD ClinGen |
|
rs750160790 CA310103846 |
379 | M>T | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407431620 rs1160567969 |
379 | M>V | No |
gnomAD ClinGen |
|
CA310103861 rs189403101 COSM1396445 |
380 | R>C | large_intestine [Cosmic] | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen cosmic curated |
rs368452689 CA310103865 |
380 | R>H | No |
ESP ExAC gnomAD ClinGen |
|
CA407431723 rs1356028066 |
383 | E>D | No |
gnomAD ClinGen |
|
rs1373890011 TCGA novel CA407431769 |
385 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
gnomAD NCI-TCGA ClinGen |
rs544064072 CA310103883 |
386 | R>K | No |
1000Genomes ExAC gnomAD ClinGen |
|
CA310103905 rs574135212 |
388 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs199715336 CA310103901 |
388 | N>S | No |
1000Genomes ExAC gnomAD ClinGen |
|
CA310103911 rs770863135 |
389 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs776720130 CA310103912 |
389 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs776037868 CA310103917 |
390 | A>S | No |
ExAC TOPMed gnomAD ClinGen |
|
rs763226145 CA310103919 |
390 | A>V | No |
ExAC gnomAD ClinGen |
|
CA310103921 rs138317042 |
391 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1040501606 CA310103949 |
392 | F>C | No |
TOPMed ClinGen |
|
rs765949453 CA310103951 |
392 | F>L | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407431988 rs1165226017 |
395 | G>D | No |
gnomAD ClinGen |
|
COSM1001341 rs371887051 CA310103953 |
396 | S>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ESP ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
rs1396151639 CA407431997 |
396 | S>P | No |
gnomAD ClinGen |
|
CA407432003 rs371887051 |
396 | S>W | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs1277670847 CA407432032 |
398 | P>A | No |
TOPMed gnomAD ClinGen |
|
CA407432038 rs1336047402 |
398 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
TOPMed gnomAD ClinGen NCI-TCGA |
rs1277670847 CA407432035 |
398 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
TOPMed gnomAD ClinGen NCI-TCGA |
rs142821233 CA310104000 |
399 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs758071463 CA310103994 |
399 | A>P | No |
ExAC gnomAD ClinGen |
|
rs758071463 CA310103993 |
399 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC gnomAD ClinGen NCI-TCGA |
rs142821233 CA310104004 COSM1396446 |
399 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
CA310104048 COSM1396447 rs763533364 |
404 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ExAC gnomAD ClinGen cosmic curated NCI-TCGA |
CA310104074 rs146095747 |
405 | C>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs146095747 CA310104070 |
405 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA310104090 rs139903547 |
406 | T>M | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs139903547 CA310104087 RCV000957463 |
406 | T>R | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen ClinVar dbSNP |
|
CA407432153 rs1424979347 |
407 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
TOPMed ClinGen NCI-TCGA |
rs547400670 CA310104103 |
407 | T>I | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA407432164 rs1479277364 |
409 | K>E | No |
TOPMed ClinGen |
|
CA310104137 rs746794364 |
411 | Q>L | No |
ExAC TOPMed gnomAD ClinGen |
|
rs746794364 CA407432179 |
411 | Q>R | No |
ExAC TOPMed gnomAD ClinGen |
|
rs757103934 CA310104146 |
412 | M>L | No |
ExAC gnomAD ClinGen |
|
rs781391943 CA310104153 |
413 | E>G | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104160 rs746099147 CA310104162 |
414 | K>N | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407432205 rs1034479481 |
415 | G>A | No |
TOPMed ClinGen |
|
rs1034479481 CA310104174 |
415 | G>E | No |
TOPMed ClinGen |
|
CA310104166 rs532812211 CA310104169 |
415 | G>R | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
TCGA novel | 416 | E>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310104177 rs267605682 |
417 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs550017145 CA310104185 |
418 | P>L | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA310104184 rs762261891 |
418 | P>S | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1304647178 CA407432232 |
420 | P>T | No |
TOPMed ClinGen |
|
rs764795923 CA310104189 |
421 | T>P | No |
ExAC gnomAD ClinGen |
|
CA407433800 rs1259069656 |
422 | C>S | No |
gnomAD ClinGen |
|
CA310104200 rs762418467 |
422 | C>W | No |
ExAC gnomAD ClinGen |
|
rs149876739 CA310104205 |
424 | T>A | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310104210 rs751519733 |
424 | T>I | No |
ExAC gnomAD ClinGen |
|
rs149876739 CA407433835 |
424 | T>S | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310104220 rs780979692 |
425 | R>C | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104228 rs548814942 |
425 | R>H | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA310104235 rs548814942 |
425 | R>L | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs1435322954 CA407433877 |
426 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
TOPMed gnomAD ClinGen NCI-TCGA |
CA310104245 rs749369072 |
427 | G>V | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407433931 rs1262456734 |
428 | L>P | No |
TOPMed ClinGen |
|
CA310104248 rs768678113 |
430 | L>P | No |
ExAC gnomAD ClinGen |
|
CA407434001 rs1428884992 |
431 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
TOPMed gnomAD ClinGen NCI-TCGA |
rs779407063 CA310104264 |
431 | R>H | No |
ExAC TOPMed gnomAD ClinGen |
|
rs779407063 CA310104274 |
431 | R>L | No |
ExAC TOPMed gnomAD ClinGen |
|
rs779407063 CA407434014 |
431 | R>P | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1568497671 CA407434042 |
432 | F>L | No |
Ensembl ClinGen |
|
rs1568497656 CA407434032 |
432 | F>Y | No |
Ensembl ClinGen |
|
CA407434050 rs1268464888 |
433 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
TOPMed ClinGen NCI-TCGA |
rs761161904 CA407434078 |
434 | C>G | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407434075 rs761161904 |
434 | C>R | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104288 rs761161904 |
434 | C>S | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407434083 rs1278769807 |
434 | C>Y | No |
gnomAD ClinGen |
|
rs1199328756 CA407434109 |
435 | S>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
gnomAD ClinGen NCI-TCGA |
rs557849528 CA310104302 |
436 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
1000Genomes gnomAD ClinGen NCI-TCGA |
rs368658601 CA310104299 |
436 | R>W | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310104307 rs762522050 |
438 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC ClinGen NCI-TCGA |
rs1247238856 CA407434211 |
439 | Q>K | No |
TOPMed gnomAD ClinGen |
|
rs763517555 CA310104316 |
439 | Q>R | No |
ExAC gnomAD ClinGen |
|
CA310104318 rs373284265 |
440 | G>D | No |
ExAC TOPMed gnomAD ClinGen |
|
rs373284265 CA310104317 |
440 | G>V | No |
ExAC TOPMed gnomAD ClinGen |
|
COSM1259226 rs767263664 CA310104341 |
441 | A>T | Variant assessed as Somatic; 0.0 impact. oesophagus [NCI-TCGA, Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
rs1159290554 CA407434246 |
442 | Q>* | No |
ClinGen gnomAD |
|
CA310104346 rs750192301 |
442 | Q>H | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104349 rs780312781 |
443 | L>P | No |
ExAC TOPMed gnomAD ClinGen |
|
rs755024903 CA310104363 |
444 | R>L | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104358 rs755024903 |
444 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA310104356 rs141967667 |
444 | R>W | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104385 rs778472203 |
445 | G>A | No |
ExAC TOPMed ClinGen |
|
rs772675484 CA310104382 |
445 | G>R | No |
ExAC TOPMed gnomAD ClinGen |
|
rs771265449 CA407434286 |
446 | A>P | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104404 rs771265449 |
446 | A>T | No |
ExAC TOPMed gnomAD ClinGen |
|
rs201375258 CA310104417 |
446 | A>V | Variant assessed as Somatic; 0.000281 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs537056115 CA310104432 |
447 | L>M | No |
1000Genomes ExAC gnomAD ClinGen |
|
rs1468767428 CA407434302 |
447 | L>P | No |
TOPMed gnomAD ClinGen |
|
CA407434313 rs371780675 COSM1259222 |
448 | R>L | oesophagus [Cosmic] | No |
ESP ExAC TOPMed gnomAD ClinGen cosmic curated |
rs371780675 CA407434311 |
448 | R>P | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310104452 rs371780675 |
448 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ESP ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs773882098 CA310104439 |
448 | R>W | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104461 rs767423134 |
449 | T>A | No |
ExAC ClinGen |
|
CA310104495 rs144271525 |
449 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ESP ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs766098415 CA310104504 |
450 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA407434343 rs1395423993 |
451 | S>N | No |
TOPMed gnomAD ClinGen |
|
CA407434344 rs1395423993 |
451 | S>T | No |
TOPMed gnomAD ClinGen |
|
TCGA novel | 452 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs755181641 CA310104506 |
452 | L>I | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1390443669 CA407434367 |
453 | L>P | No |
gnomAD ClinGen |
|
rs200762489 CA407434385 |
455 | A>S | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs200762489 CA310104509 |
455 | A>T | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310104511 rs560016212 |
455 | A>V | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA310104535 rs757585574 |
456 | Q>* | No |
ExAC TOPMed gnomAD ClinGen |
|
rs572155411 CA310104541 |
456 | Q>P | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs572155411 CA310104546 |
456 | Q>R | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA310104548 rs748930449 |
457 | G>S | No |
ExAC gnomAD ClinGen |
|
CA310104550 rs768166884 |
460 | A>G | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1263508761 CA407434438 |
460 | A>T | No |
gnomAD ClinGen |
|
rs768166884 CA310104552 |
460 | A>V | No |
ExAC TOPMed gnomAD ClinGen |
|
rs200623569 CA310104554 |
462 | T>M | Variant assessed as Somatic; 0.0002313 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA407434463 rs1252522130 |
462 | T>P | No |
ClinGen gnomAD |
|
CA407434481 rs564190416 |
463 | S>F | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs564190416 CA310104566 |
463 | S>Y | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA310104574 rs776254226 |
464 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs1304431322 CA407434494 |
465 | L>F | No |
TOPMed gnomAD ClinGen |
|
rs1300442787 CA407434508 |
466 | H>N | No |
TOPMed gnomAD ClinGen |
|
rs759424283 CA310104600 |
466 | H>R | No |
ExAC gnomAD ClinGen |
|
CA407434522 COSM1217462 rs1300799865 |
467 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
TOPMed ClinGen cosmic curated NCI-TCGA |
rs147804224 CA407434525 |
467 | R>L | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs147804224 CA310104608 |
467 | R>P | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310104607 rs147804224 COSM1217460 |
467 | R>Q | large_intestine [Cosmic] | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen cosmic curated |
rs758484350 CA407434531 |
468 | E>* | No |
ExAC TOPMed gnomAD ClinGen |
|
rs764284852 CA310104619 |
468 | E>G | No |
ExAC TOPMed gnomAD ClinGen |
|
rs758484350 CA310104618 |
468 | E>Q | No |
ExAC TOPMed gnomAD ClinGen |
|
rs781743031 CA310104628 |
471 | E>Q | No |
ExAC gnomAD ClinGen |
|
rs746200623 CA310104629 |
472 | R>S | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407434609 rs1486674500 |
474 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA310104639 rs149186407 |
474 | G>R | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs1555774683 CA407434615 |
475 | V>M | No |
Ensembl ClinGen |
|
CA407434631 rs1180368183 |
476 | Q>* | No |
ClinGen gnomAD |
|
rs747806145 CA310104643 |
476 | Q>L | No |
ExAC gnomAD ClinGen |
|
CA407434636 rs747806145 |
476 | Q>R | No |
ExAC gnomAD ClinGen |
|
TCGA novel | 478 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs143361632 CA310104662 |
479 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ESP ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA407434674 rs1388695037 |
479 | D>V | No |
gnomAD ClinGen |
|
rs1429726249 CA407434685 |
480 | L>F | No |
gnomAD ClinGen |
|
CA310104663 rs867801459 |
480 | L>H | No |
Ensembl ClinGen |
|
rs1429726249 CA407434682 |
480 | L>I | No |
gnomAD ClinGen |
|
CA310104667 COSM2151093 rs770750785 |
481 | R>C | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
CA407434692 rs1449525359 |
481 | R>H | No |
TOPMed gnomAD ClinGen |
|
CA310104672 rs776687009 |
482 | L>V | No |
ExAC gnomAD ClinGen |
|
rs893206785 CA407434703 |
483 | F>L | No |
TOPMed ClinGen |
|
rs759245111 CA310104700 |
484 | L>R | No |
ExAC gnomAD ClinGen |
|
CA310104704 rs377688731 |
485 | D>E | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs866085205 CA407434719 |
486 | G>A | No |
TOPMed ClinGen |
|
CA310104720 rs866085205 |
486 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
TOPMed ClinGen NCI-TCGA |
CA310104716 COSM273019 rs763292353 |
486 | G>R | Variant assessed as Somatic; 0.0 impact. pancreas large_intestine [NCI-TCGA, Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
rs1177006903 CA407434720 |
487 | D>N | No |
TOPMed ClinGen |
|
CA310104735 rs764229799 |
488 | I>F | No |
ExAC gnomAD ClinGen |
|
CA310104737 rs148374359 |
489 | L>V | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs762005489 CA310104759 |
490 | R>C | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104765 rs767901107 COSM1396448 |
490 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
CA310104782 RCV001311910 rs113204023 |
492 | D>N | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen ClinVar dbSNP |
|
TCGA novel | 493 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA407434789 rs1320456898 |
497 | G>D | No |
gnomAD ClinGen |
|
rs752304219 CA310104797 |
498 | C>* | No |
ExAC gnomAD ClinGen |
|
rs1568499690 CA407434795 |
498 | C>Y | No |
Ensembl ClinGen |
|
CA407434799 rs1415689694 |
499 | Y>N | No |
gnomAD ClinGen |
|
rs1568499753 CA407434810 |
500 | S>F | No |
ClinGen Ensembl |
|
rs777526437 CA310104830 |
501 | F>C | No |
ExAC gnomAD ClinGen |
|
CA310104828 rs777526437 |
501 | F>S | No |
ExAC gnomAD ClinGen |
|
rs1231378636 CA407434824 |
502 | I>M | No |
TOPMed gnomAD ClinGen |
|
CA310104831 rs770540636 |
502 | I>V | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104835 rs745829660 |
503 | H>Q | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104834 rs780923397 |
503 | H>Y | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1434025089 CA407434834 |
504 | L>F | No |
gnomAD ClinGen |
|
TCGA novel | 504 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA407434848 rs1304085957 |
505 | S>I | No |
TOPMed gnomAD ClinGen |
|
CA407434845 rs1304085957 |
505 | S>N | No |
TOPMed gnomAD ClinGen |
|
rs769664318 CA310104836 |
507 | Q>* | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104859 rs142785605 |
507 | Q>H | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310104866 rs768978792 |
508 | Q>K | No |
ExAC gnomAD ClinGen |
|
rs774696773 CA310104869 |
508 | Q>R | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1464742024 CA407434962 |
511 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
TOPMed gnomAD ClinGen NCI-TCGA |
rs1401545356 CA407434980 |
512 | A>V | No |
TOPMed ClinGen |
|
rs767642490 CA310104876 |
513 | L>P | No |
ExAC gnomAD ClinGen |
|
rs553038879 COSM1305107 CA310104877 |
514 | F>L | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
gnomAD ClinGen cosmic curated NCI-TCGA |
CA310104879 VAR_068977 rs61735082 RCV000950283 |
516 | T>A | No |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
CA310104884 rs146084801 |
516 | T>I | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs754175644 CA407435048 |
517 | L>V | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407435060 rs755393356 |
518 | E>* | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310104887 rs755393356 |
518 | E>K | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1250330847 CA407435068 |
518 | E>V | No |
TOPMed ClinGen |
|
rs181360821 CA310104888 |
519 | K>E | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs1283152392 CA407435124 |
521 | E>D | No |
TOPMed ClinGen |
|
TCGA novel | 521 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs386811006 CA310104899 |
522 | E>G | No |
Ensembl ClinGen |
|
CA310104900 rs61735083 VAR_068978 RCV000950284 |
522 | E>G | No |
1000Genomes ExAC TOPMed gnomAD ClinGen ClinVar UniProt dbSNP |
|
CA407435126 rs1183506640 |
522 | E>K | No |
gnomAD ClinGen |
|
rs1568500310 CA407435133 |
523 | E>* | No |
ClinGen Ensembl |
|
rs149295176 CA310104944 |
524 | D>G | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs749086000 CA310104995 |
527 | G>D | No |
ExAC gnomAD ClinGen |
|
CA310104988 rs371453526 |
527 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1230245655 CA407435209 |
528 | H>R | No |
ClinGen gnomAD |
|
VAR_068979 rs34804158 CA310105038 |
529 | T>A | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen UniProt dbSNP |
|
CA310105055 rs113752373 |
529 | T>I | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310105047 rs113752373 |
529 | T>N | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs1450202535 CA407435247 |
531 | D>N | No |
TOPMed gnomAD ClinGen |
|
rs147222602 CA310105063 |
532 | I>T | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA407435271 rs1221513804 |
532 | I>V | No |
gnomAD ClinGen |
|
rs1183629232 CA407435300 |
533 | G>R | No |
ClinGen gnomAD |
|
CA310105082 rs144234287 |
534 | D>E | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310105086 COSM295159 rs765646068 |
535 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
CA310105093 CA310105090 rs765646068 |
535 | V>L | No |
ExAC TOPMed gnomAD ClinGen |
|
COSM1481519 rs1165160519 CA407435359 |
536 | Q>* | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
gnomAD ClinGen cosmic curated NCI-TCGA |
CA407435429 rs1485746664 |
538 | L>P | No |
TOPMed ClinGen |
|
rs749931307 CA310105130 |
541 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs755178555 CA310105156 |
542 | V>A | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310105151 rs755178555 COSM1396450 |
542 | V>E | large_intestine [Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated |
CA310105149 rs755744039 |
542 | V>I | No |
ExAC gnomAD ClinGen |
|
CA407435570 rs1221064433 |
543 | E>G | No |
TOPMed ClinGen |
|
rs754673670 CA310105180 |
544 | R>K | No |
ClinGen ExAC gnomAD |
|
rs1409217636 CA407435608 |
545 | L>F | No |
TOPMed gnomAD ClinGen |
|
CA407435624 rs1306324883 |
546 | R>G | No |
gnomAD ClinGen |
|
CA310105184 COSM1396451 rs778794562 |
546 | R>K | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA310105185 rs747930528 |
548 | P>S | No |
ExAC gnomAD ClinGen |
|
CA407435690 rs1354708300 |
549 | D>N | No |
TOPMed gnomAD ClinGen |
|
CA407435693 rs1361030563 |
549 | D>V | No |
TOPMed ClinGen |
|
rs1354708300 CA407435692 |
549 | D>Y | No |
TOPMed gnomAD ClinGen |
|
rs772312834 CA310105188 |
551 | I>L | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310105194 rs182010297 |
551 | I>M | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs756737759 CA407435770 |
552 | Q>* | No |
TOPMed gnomAD ClinGen |
|
rs756737759 CA310105233 |
552 | Q>E | No |
TOPMed gnomAD ClinGen |
|
rs1203612489 CA407435810 |
553 | A>V | No |
gnomAD ClinGen |
|
CA310105242 rs147794442 |
554 | G>D | No |
ESP ExAC TOPMed ClinGen |
|
rs1568501061 CA407435841 |
555 | Y>* | No |
Ensembl ClinGen |
|
rs139117160 CA310105286 |
555 | Y>C | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310105285 rs763277003 |
555 | Y>D | No |
ExAC gnomAD ClinGen |
|
rs1428426150 CA407435867 |
556 | Y>* | No |
ClinGen TOPMed |
|
CA310105290 rs750170621 |
556 | Y>C | No |
ExAC gnomAD ClinGen |
|
CA407435855 rs750170621 |
556 | Y>S | No |
ExAC gnomAD ClinGen |
|
rs149824323 CA310105312 |
557 | S>F | No |
ESP ExAC gnomAD ClinGen |
|
CA407435926 rs10412915 |
558 | F>L | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA407435930 rs1166604729 |
559 | G>S | No |
gnomAD ClinGen |
|
rs377213172 CA310105325 |
560 | L>F | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310105330 rs61735086 |
561 | A>T | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310105331 rs758190201 |
562 | N>I | No |
ClinGen ExAC gnomAD |
|
rs1259045887 CA407436013 |
562 | N>K | No |
gnomAD ClinGen |
|
CA407436047 rs1489641633 |
563 | E>A | No |
TOPMed ClinGen |
|
CA407436030 rs777904026 |
563 | E>K | No |
ClinGen ExAC gnomAD |
|
CA310105347 rs777904026 |
563 | E>Q | No |
ClinGen ExAC gnomAD |
|
rs369675696 CA310105350 |
565 | R>* | No |
ESP gnomAD ClinGen |
|
rs369675696 CA407436098 |
565 | R>G | No |
ESP gnomAD ClinGen |
|
rs1226884053 CA407436120 |
566 | A>P | No |
gnomAD ClinGen |
|
rs867884283 CA407436166 |
567 | K>N | No |
TOPMed ClinGen |
|
CA407436245 rs1200463287 |
570 | E>A | No |
gnomAD ClinGen |
|
CA407436227 rs1225136250 |
570 | E>K | No |
TOPMed ClinGen |
|
rs1345861525 CA407436293 |
572 | T>A | No |
TOPMed ClinGen |
|
rs781280567 CA310105398 |
573 | F>C | No |
ExAC gnomAD ClinGen |
|
rs781280567 CA310105390 |
573 | F>S | No |
ExAC gnomAD ClinGen |
|
rs1248458884 CA407436377 |
574 | G>R | No |
TOPMed gnomAD ClinGen |
|
CA407436436 rs763371878 |
576 | R>G | No |
ExAC TOPMed gnomAD ClinGen |
|
rs146643490 CA310105416 |
576 | R>Q | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310105409 rs763371878 |
576 | R>W | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310105419 rs772945921 |
577 | M>I | No |
ExAC ClinGen |
|
CA310105428 rs141202537 |
578 | S>* | No |
ClinGen ESP ExAC gnomAD |
|
rs149897717 CA310105441 |
579 | P>L | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs765949937 CA310105433 |
579 | P>S | No |
ExAC gnomAD ClinGen |
|
rs1602371656 CA407436579 |
580 | D>N | No |
Ensembl ClinGen |
|
CA407436680 rs1602371698 |
581 | I>M | No |
Ensembl ClinGen |
|
CA407436737 rs1433274315 |
583 | Q>E | No |
gnomAD ClinGen |
|
rs141442342 CA310105467 |
583 | Q>P | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs141442342 CA310105468 |
583 | Q>R | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310105470 rs777564374 |
587 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs572832021 CA310105484 |
587 | R>L | No |
ExAC TOPMed gnomAD ClinGen |
|
rs572832021 CA407436899 |
587 | R>P | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310105474 rs572832021 COSM3389379 |
587 | R>Q | pancreas [Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated |
rs1276162560 CA407436913 |
588 | C>Y | No |
gnomAD ClinGen |
|
CA407436934 rs150431153 COSM1582429 |
589 | D>N | stomach [Cosmic] | No |
ESP ExAC TOPMed gnomAD ClinGen cosmic curated |
CA310105494 rs150431153 |
589 | D>Y | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs1480298627 CA407436970 |
590 | I>K | No |
ClinGen TOPMed |
|
CA310105508 rs780547731 |
590 | I>M | No |
ExAC TOPMed gnomAD ClinGen |
|
rs769831942 CA310105499 |
590 | I>V | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1205410030 CA407436990 |
591 | S>C | No |
TOPMed ClinGen |
|
CA310105522 rs749776631 |
593 | K>E | No |
ExAC gnomAD ClinGen |
|
COSM568120 CA407437066 rs1247177445 |
593 | K>N | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
gnomAD ClinGen cosmic curated NCI-TCGA |
CA407437089 rs1433757659 |
595 | G>R | No |
ClinGen TOPMed gnomAD |
|
CA407437148 rs1376035466 |
596 | H>Q | No |
ClinGen gnomAD |
|
CA407437139 rs1357420855 |
596 | H>R | No |
ClinGen gnomAD |
|
CA310105528 rs145361990 |
596 | H>Y | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310105565 rs921305811 |
597 | S>* | No |
TOPMed ClinGen |
|
rs1221983987 CA407437155 |
597 | S>P | No |
TOPMed ClinGen |
|
rs774890248 CA310105580 |
598 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC gnomAD ClinGen NCI-TCGA |
rs1455841338 CA407437244 |
600 | T>K | No |
ClinGen gnomAD |
|
CA310105612 rs776209090 |
601 | D>E | No |
ExAC TOPMed gnomAD ClinGen |
|
rs759016867 CA310105617 |
602 | L>V | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407437329 rs752629141 |
605 | L>F | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310105622 rs752629141 |
605 | L>I | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407437351 rs1365162739 |
606 | L>H | No |
TOPMed ClinGen |
|
rs533433932 CA310105661 |
607 | G>S | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1226172199 CA407437382 |
607 | G>V | No |
gnomAD ClinGen |
|
CA407437407 rs1488666933 |
608 | C>* | No |
gnomAD ClinGen |
|
rs1267316559 CA407437393 |
608 | C>S | No |
gnomAD ClinGen |
|
CA407437396 rs1568502248 |
608 | C>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
Ensembl ClinGen NCI-TCGA |
CA407437415 rs903007408 |
609 | L>V | No |
gnomAD ClinGen |
|
CA310105675 rs551890882 |
610 | Y>* | No |
ExAC gnomAD ClinGen |
|
rs1451115316 CA407437443 |
611 | E>K | No |
TOPMed gnomAD ClinGen |
|
rs1451115316 CA407437447 |
611 | E>Q | No |
TOPMed gnomAD ClinGen |
|
rs1340973115 CA407437466 |
612 | S>F | No |
ClinGen gnomAD |
|
TCGA novel | 614 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs756163264 CA310105709 |
616 | E>Q | No |
ExAC gnomAD ClinGen |
|
CA407437559 rs1471763280 VAR_084588 |
616 | E>V | found in patients with female infertility; unknown pathological significance [UniProt] | No |
gnomAD ClinGen UniProt dbSNP |
rs1461708515 CA407437685 |
622 | M>I | No |
TOPMed ClinGen |
|
CA407437674 rs1459721544 |
622 | M>T | No |
gnomAD ClinGen |
|
rs755514044 CA407437692 |
623 | A>P | No |
ExAC TOPMed gnomAD ClinGen |
|
rs755514044 CA310105746 |
623 | A>T | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1485707548 CA407437749 |
625 | F>L | No |
TOPMed gnomAD ClinGen |
|
CA310105751 rs868127450 |
627 | E>D | No |
Ensembl ClinGen |
|
CA310105770 rs866985418 |
629 | S>F | No |
Ensembl ClinGen |
|
rs147213467 CA310105764 |
629 | S>P | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs147213467 CA407437818 |
629 | S>T | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs182098487 CA310105800 |
630 | L>P | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310105810 rs776285800 |
631 | H>L | No |
ExAC gnomAD ClinGen |
|
rs1602373059 CA407437843 |
631 | H>Y | No |
Ensembl ClinGen |
|
rs745528418 CA310105825 |
633 | N>D | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310105830 rs769305078 |
634 | A>P | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310105831 rs769305078 |
634 | A>S | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407437922 rs774830526 |
636 | D>E | No |
ExAC TOPMed ClinGen |
|
CA407437932 rs764005997 |
637 | V>A | No |
ExAC TOPMed ClinGen |
|
CA310105847 rs764005997 |
637 | V>G | No |
ExAC TOPMed ClinGen |
|
rs558929398 CA310105839 COSM1751159 |
637 | V>I | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
1000Genomes ExAC gnomAD ClinGen cosmic curated NCI-TCGA |
rs200868551 CA310105874 |
640 | S>F | No |
1000Genomes ClinGen |
|
CA310105869 rs1015946284 |
640 | S>T | No |
ClinGen TOPMed |
|
CA310105898 rs761530739 |
642 | F>L | No |
ExAC gnomAD ClinGen |
|
rs555672988 CA310105917 |
644 | V>I | No |
TOPMed gnomAD ClinGen |
|
TCGA novel | 645 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs201621704 CA310105927 |
646 | H>Q | No |
1000Genomes ExAC gnomAD ClinGen |
|
rs1262098250 CA407438005 |
646 | H>Y | No |
TOPMed ClinGen |
|
rs200381270 CA310105939 |
647 | C>S | No |
1000Genomes ExAC gnomAD ClinGen |
|
rs200381270 CA310105935 |
647 | C>Y | No |
1000Genomes ExAC gnomAD ClinGen |
|
CA310105962 rs201735558 |
648 | R>* | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs201735558 CA310105953 |
648 | R>G | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs753846462 CA310105972 |
648 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA407438020 rs1377571564 |
649 | N>Y | No |
gnomAD ClinGen |
|
CA407438041 rs1602373763 |
652 | K>E | No |
Ensembl ClinGen |
|
rs1185949518 CA407438044 |
652 | K>I | No |
ClinGen gnomAD |
|
rs755171724 CA310105982 |
653 | M>I | No |
ExAC gnomAD ClinGen |
|
rs779493327 CA310105983 |
654 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
VAR_084589 | 654 | S>del | No | UniProt | |
CA310105989 rs758785918 |
655 | L>P | No |
ExAC ClinGen |
|
CA407438097 rs1427208362 |
656 | Q>* | No |
gnomAD ClinGen |
|
CA310106004 rs747440771 |
656 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA407438140 rs1568503173 |
658 | I>K | No |
Ensembl ClinGen |
|
rs1295298664 CA407438161 |
661 | N>T | No |
TOPMed ClinGen |
|
rs1397406502 CA407438160 |
661 | N>Y | No |
gnomAD ClinGen |
|
rs769307616 CA310106024 |
663 | P>A | No |
ExAC gnomAD ClinGen |
|
rs775271805 CA310106038 |
663 | P>L | No |
ExAC TOPMed gnomAD ClinGen |
|
rs775271805 CA407438175 |
663 | P>R | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407438185 rs1424780558 |
665 | N>D | No |
TOPMed ClinGen |
|
rs989447661 CA310106101 |
665 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
TOPMed ClinGen NCI-TCGA |
CA310106098 rs768161237 |
665 | N>S | No |
ExAC gnomAD ClinGen |
|
CA310106091 rs768161237 |
665 | N>T | No |
ExAC gnomAD ClinGen |
|
CA310106110 rs761763761 |
666 | V>A | No |
ExAC gnomAD ClinGen |
|
CA310106111 rs761789961 |
667 | T>S | No |
ExAC TOPMed ClinGen |
|
CA310106141 rs370185803 COSM1001346 |
668 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
rs1490209747 CA407438212 |
670 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
TOPMed ClinGen NCI-TCGA |
rs1449390922 CA407438236 |
673 | A>G | No |
gnomAD ClinGen |
|
rs148404367 CA310106173 |
673 | A>T | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310106176 rs758940445 |
674 | E>K | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1347729053 CA407438247 |
675 | V>G | No |
TOPMed ClinGen |
|
rs778393891 CA310106179 |
675 | V>L | No |
ExAC gnomAD ClinGen |
|
TCGA novel | 681 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs542090265 CA310107858 |
682 | Q>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA310107853 rs542090265 |
682 | Q>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA310107861 rs776535407 |
683 | H>Y | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310107867 rs140594282 |
684 | M>V | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA407438930 rs1189013526 |
685 | L>H | No |
gnomAD ClinGen |
|
TCGA novel | 685 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA407438934 rs1189013526 |
685 | L>P | No |
gnomAD ClinGen |
|
CA407438957 rs1452391379 |
687 | F>C | No |
TOPMed ClinGen |
|
rs747399133 CA310107868 |
688 | W>* | No |
TOPMed ClinGen |
|
CA407438965 rs1239735982 |
688 | W>R | No |
ClinGen TOPMed |
|
CA310107869 rs770127991 |
689 | T>A | No |
ExAC TOPMed gnomAD ClinGen |
|
rs775920834 CA310107875 |
689 | T>K | No |
ExAC gnomAD ClinGen |
|
CA310107871 rs775920834 |
689 | T>M | No |
ExAC gnomAD ClinGen |
|
rs1327689934 CA407439007 |
691 | L>V | No |
gnomAD ClinGen |
|
TCGA novel | 692 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs267605683 CA310107898 |
693 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
Ensembl ClinGen NCI-TCGA |
TCGA novel | 694 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs762417448 CA310107911 |
695 | F>L | No |
ClinGen ExAC gnomAD |
|
rs768054992 CA310107921 |
696 | G>R | No |
ExAC gnomAD ClinGen |
|
CA310107927 rs750767986 |
697 | S>* | No |
ExAC gnomAD ClinGen |
|
rs756532078 CA310107932 |
699 | K>R | No |
ExAC gnomAD ClinGen |
|
CA310107934 rs764799542 |
700 | D>V | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407439117 rs1568507882 |
700 | D>Y | No |
Ensembl ClinGen |
|
TCGA novel | 701 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs752404229 CA310107935 |
701 | L>V | No |
ExAC gnomAD ClinGen |
|
rs1056383906 CA310107960 |
702 | M>T | No |
TOPMed ClinGen |
|
CA310107956 rs757795437 |
702 | M>V | No |
ExAC TOPMed ClinGen |
|
rs777371558 CA310107967 |
703 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA310107962 rs571531167 |
703 | G>S | No |
Ensembl ClinGen |
|
rs61733928 CA310107974 |
704 | L>I | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs745654203 CA310107992 |
708 | D>Y | No |
ExAC gnomAD ClinGen |
|
rs909432908 CA310108032 |
709 | S>R | No |
Ensembl ClinGen |
|
rs776270073 CA310108041 |
710 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA407439248 rs1222365479 |
711 | L>F | No |
gnomAD ClinGen |
|
rs769716258 CA310108044 |
711 | L>R | No |
ExAC gnomAD ClinGen |
|
COSM1743922 CA407439245 rs1222365479 |
711 | L>V | biliary_tract [Cosmic] | No |
gnomAD ClinGen cosmic curated |
rs1372167232 CA407439266 |
712 | S>R | No |
TOPMed ClinGen |
|
rs775798143 CA310108046 |
712 | S>R | No |
ExAC TOPMed gnomAD ClinGen |
|
rs768579950 CA310108077 |
714 | S>A | No |
ExAC gnomAD ClinGen |
|
rs1239219069 CA407439303 |
716 | V>L | No |
TOPMed gnomAD ClinGen |
|
CA310108116 rs773779658 |
721 | E>D | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310108127 rs201705438 |
723 | I>M | No |
1000Genomes ClinGen |
|
CA310108144 rs369147616 |
724 | A>P | No |
1000Genomes ESP ExAC gnomAD ClinGen |
|
CA310108150 rs369147616 |
724 | A>T | No |
1000Genomes ESP ExAC gnomAD ClinGen |
|
rs189450393 RCV000886427 CA310108156 |
724 | A>V | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen ClinVar dbSNP |
|
CA407439475 rs1418220858 |
726 | D>A | No |
ClinGen TOPMed |
|
rs758035297 CA310108180 |
727 | T>S | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1306412324 CA407439536 |
729 | H>R | No |
gnomAD ClinGen |
|
rs867883038 CA310108185 |
731 | Q>* | No |
TOPMed ClinGen |
|
CA310108189 rs763700471 |
731 | Q>R | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310108195 rs751065392 |
732 | R>T | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310108208 rs367800971 |
734 | V>A | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA407440543 CA310109682 rs771454157 |
735 | F>L | No |
ExAC gnomAD ClinGen |
|
CA407440536 rs1391250233 |
735 | F>Y | No |
gnomAD ClinGen |
|
rs777070553 CA310109685 |
736 | K>R | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310109689 rs76921873 |
737 | N>T | No |
Ensembl ClinGen |
|
CA310109695 rs770067786 |
739 | S>A | No |
ExAC gnomAD ClinGen |
|
CA310109700 rs149891105 COSM107179 |
740 | P>L | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
rs1182934018 CA407440670 |
742 | D>A | No |
ClinGen TOPMed gnomAD |
|
rs774007013 CA310109702 |
742 | D>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC gnomAD ClinGen NCI-TCGA |
CA407440698 rs1410358483 |
743 | A>G | No |
TOPMed ClinGen |
|
CA310109709 rs767321068 |
744 | H>R | No |
ExAC gnomAD ClinGen |
|
rs1321039018 CA407440715 |
744 | H>Y | No |
gnomAD ClinGen |
|
rs766338756 CA310109732 |
745 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs749933450 CA310109727 |
745 | R>W | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310109744 rs753727675 |
747 | L>I | Variant assessed as Somatic; 0.0001848 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
rs778600165 CA310109755 |
747 | L>P | No |
ExAC gnomAD ClinGen |
|
rs753727675 CA310109752 |
747 | L>V | No |
ExAC TOPMed gnomAD ClinGen |
|
rs752525392 CA310109757 |
748 | C>S | No |
ExAC TOPMed gnomAD ClinGen |
|
rs868678363 CA310109766 |
750 | A>P | No |
Ensembl ClinGen |
|
rs1266848624 CA407440861 COSM1217461 |
752 | R>* | kidney Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
gnomAD ClinGen cosmic curated NCI-TCGA |
CA407440859 rs1266848624 |
752 | R>G | No |
gnomAD ClinGen |
|
rs777510010 CA310109770 |
752 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
VAR_084590 | 752 | R>del | No | UniProt | |
rs1228519362 CA407440868 |
753 | G>D | No |
TOPMed ClinGen |
|
rs1414681657 CA407440867 |
753 | G>R | No |
TOPMed gnomAD ClinGen |
|
CA310109779 rs1000471697 |
754 | H>R | No |
TOPMed gnomAD ClinGen |
|
CA310109776 rs747086439 |
754 | H>Y | No |
ClinGen ExAC gnomAD |
|
rs757287350 CA310109790 |
755 | K>R | No |
ExAC gnomAD ClinGen |
|
CA407440889 rs1568512071 |
756 | T>I | No |
Ensembl ClinGen |
|
rs200375320 CA310109795 |
758 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA310109799 rs200375320 |
758 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs200375320 CA310109797 |
758 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA310109807 rs543253453 |
759 | Y>C | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs543253453 CA310109810 |
759 | Y>F | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA310109813 rs773068640 |
760 | L>V | No |
ExAC gnomAD ClinGen |
|
rs1288539145 CA407440953 |
761 | T>I | No |
gnomAD ClinGen |
|
rs1383817522 CA407440991 |
764 | G>S | No |
TOPMed ClinGen |
|
CA310109830 rs765824500 |
765 | N>H | No |
ExAC gnomAD ClinGen |
|
rs372774611 CA310109835 |
765 | N>S | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs759357240 CA310109838 |
766 | D>E | No |
ClinGen ExAC gnomAD |
|
rs202151550 CA310109843 |
767 | Q>L | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310109846 rs202151550 |
767 | Q>R | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407441063 rs1568512380 |
768 | D>N | No |
Ensembl ClinGen |
|
CA407441090 rs1183179038 |
769 | D>G | No |
gnomAD ClinGen |
|
rs758254532 CA310109854 |
769 | D>H | No |
ClinGen ExAC gnomAD |
|
CA310109856 rs146632517 |
770 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 771 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA407441137 COSM1712848 rs1368136796 |
772 | P>S | Variant assessed as Somatic; impact. skin [NCI-TCGA, Cosmic] | No |
TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
rs781161777 CA310109867 |
773 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs781161777 CA310109864 |
773 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs756558130 CA407441194 CA310109874 |
774 | L>F | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407441244 rs141473350 |
776 | E>D | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310109881 rs749669517 |
777 | V>G | No |
ExAC gnomAD ClinGen |
|
CA407441247 rs1363196226 |
777 | V>I | No |
ClinGen gnomAD |
|
rs145164030 CA310109884 |
778 | L>S | No |
ESP gnomAD ClinGen |
|
CA310109888 rs769150580 |
779 | R>K | No |
ExAC gnomAD ClinGen |
|
rs971494741 CA310109892 |
780 | H>P | No |
ClinGen TOPMed gnomAD |
|
rs572216748 CA310109900 |
781 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1363779698 CA407441312 |
781 | P>L | No |
TOPMed ClinGen |
|
rs572216748 CA310109896 |
781 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA310109907 rs1028422757 |
783 | C>R | No |
TOPMed ClinGen |
|
CA407441346 rs1602390268 |
784 | N>D | No |
Ensembl ClinGen |
|
CA310109915 rs145922476 |
786 | R>* | No |
1000Genomes ExAC gnomAD ClinGen |
|
rs145922476 CA310109910 |
786 | R>G | No |
1000Genomes ExAC gnomAD ClinGen |
|
CA310109918 rs145686547 |
786 | R>Q | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310109921 rs267605684 |
788 | L>F | No |
Ensembl ClinGen |
|
rs369032564 CA310109930 |
789 | G>R | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs1020741479 CA310111688 |
790 | L>* | No |
Ensembl ClinGen |
|
rs1602407492 CA407442679 |
790 | L>V | No |
Ensembl ClinGen |
|
CA407442711 rs1225899116 |
791 | V>A | No |
TOPMed gnomAD ClinGen |
|
CA310111689 rs779498980 |
791 | V>M | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310111691 rs557625923 |
792 | S>F | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs768521611 CA310111693 |
793 | C>W | No |
ExAC gnomAD ClinGen |
|
rs774348072 CA310111697 |
794 | S>C | No |
ExAC TOPMed gnomAD ClinGen |
|
rs774348072 CA407442781 |
794 | S>F | No |
ExAC TOPMed gnomAD ClinGen |
|
rs771956956 CA310111701 |
795 | A>T | No |
ExAC gnomAD ClinGen |
|
CA407442819 rs1178792001 |
796 | T>A | No |
gnomAD ClinGen |
|
rs1405493774 CA407442827 |
796 | T>N | No |
gnomAD ClinGen |
|
rs1165347218 CA407442834 |
797 | T>A | No |
ClinGen gnomAD |
|
rs1165347218 CA407442837 |
797 | T>S | No |
ClinGen gnomAD |
|
rs1367554037 CA407442867 |
798 | Q>* | No |
gnomAD ClinGen |
|
CA310111708 rs766735382 |
798 | Q>R | No |
ExAC gnomAD ClinGen |
|
CA310111711 rs753914793 |
799 | Q>R | No |
ExAC gnomAD ClinGen |
|
TCGA novel | 800 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310111718 rs753307532 |
801 | A>D | No |
ClinGen ExAC gnomAD |
|
rs117066658 RCV000953391 CA310111716 |
801 | A>T | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen ClinVar dbSNP |
|
CA407443010 rs1229412947 |
802 | D>G | No |
gnomAD ClinGen |
|
CA310111720 rs758670254 |
802 | D>H | No |
ClinGen ExAC gnomAD |
|
rs764561180 CA310111722 |
803 | L>F | No |
ExAC gnomAD ClinGen |
|
CA310111724 rs376466868 |
803 | L>R | No |
ClinGen ESP ExAC TOPMed |
|
rs755714001 CA310111727 |
805 | L>V | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310111729 rs779693721 |
806 | A>S | No |
ClinGen ExAC gnomAD |
|
rs748728484 CA310111734 |
807 | L>P | No |
ClinGen ExAC gnomAD |
|
rs920308046 CA310111732 |
807 | L>V | No |
Ensembl ClinGen |
|
CA310111740 rs146037192 |
810 | N>S | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
TCGA novel | 810 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310111742 rs1005739609 |
812 | S>Y | No |
TOPMed gnomAD ClinGen |
|
rs370914730 CA310111745 |
814 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ESP ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA407443341 rs1193689662 |
818 | L>V | No |
TOPMed ClinGen |
|
rs771213726 CA310111755 |
820 | D>N | No |
ExAC TOPMed gnomAD ClinGen |
|
rs777062884 CA310111760 |
821 | N>D | No |
ExAC gnomAD ClinGen |
|
rs777062884 CA310111758 |
821 | N>H | No |
ExAC gnomAD ClinGen |
|
rs765408642 CA310111763 |
821 | N>S | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407443426 rs1320331056 |
822 | E>D | No |
gnomAD ClinGen |
|
CA310111766 rs775830349 |
823 | L>F | No |
ExAC gnomAD ClinGen |
|
rs751862608 CA310111774 |
825 | D>E | No |
ExAC gnomAD ClinGen |
|
CA407443463 rs541059927 |
825 | D>H | No |
1000Genomes ExAC gnomAD ClinGen |
|
CA310111772 rs541059927 |
825 | D>Y | No |
1000Genomes ExAC gnomAD ClinGen |
|
rs1602408565 CA407444193 |
826 | E>Q | No |
ClinGen Ensembl |
|
CA310111777 rs1039672376 |
827 | G>V | No |
Ensembl ClinGen |
|
CA310111782 rs535953662 |
829 | K>E | No |
Ensembl ClinGen |
|
CA310111784 rs201725128 |
829 | K>R | No |
Ensembl ClinGen |
|
CA310111788 rs766009543 |
831 | L>P | No |
ClinGen ExAC gnomAD |
|
CA310111789 rs753543825 |
832 | Y>C | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310111791 rs753543825 |
832 | Y>S | No |
ExAC TOPMed gnomAD ClinGen |
|
rs747639382 CA310111796 |
834 | T>A | No |
ExAC gnomAD ClinGen |
|
CA407444443 rs1194322716 |
836 | R>K | No |
TOPMed ClinGen |
|
rs758302891 CA310111798 |
837 | H>Y | No |
ExAC TOPMed gnomAD ClinGen |
|
TCGA novel | 838 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1419163378 CA407444580 |
839 | K>T | No |
ClinGen gnomAD |
|
rs776972990 CA310111811 |
843 | Q>* | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1452589311 CA407444693 |
843 | Q>R | No |
gnomAD ClinGen |
|
CA407444745 rs1321753214 |
845 | L>W | No |
gnomAD ClinGen |
|
rs746134985 CA310111814 |
846 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
TCGA novel | 846 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs201029849 CA310112006 |
847 | L>W | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
VAR_084591 | 848 | E>D | found in patients with female infertility; unknown pathological significance [UniProt] | No | UniProt |
rs1240754844 CA407445258 |
850 | C>G | No |
TOPMed gnomAD ClinGen |
|
rs1240754844 CA407445254 |
850 | C>R | No |
TOPMed gnomAD ClinGen |
|
rs1422671836 CA407445273 |
850 | C>S | No |
ClinGen gnomAD |
|
rs1378294849 CA407445395 |
853 | T>R | No |
TOPMed ClinGen |
|
rs776814479 CA310112016 |
854 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC gnomAD ClinGen NCI-TCGA |
rs1204812571 CA407445482 |
855 | A>D | No |
TOPMed ClinGen |
|
CA310112018 rs543284761 |
856 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1270345989 CA407445552 |
857 | C>F | No |
TOPMed ClinGen |
|
CA310112021 rs768358040 |
858 | K>R | No |
ExAC ClinGen |
|
CA310112023 rs774213139 |
860 | L>V | No |
ClinGen ExAC gnomAD |
|
rs1004639400 CA310112025 |
861 | A>V | No |
gnomAD ClinGen |
|
CA310112028 rs767184044 |
863 | V>A | No |
ExAC gnomAD ClinGen |
|
rs536617913 CA310112027 |
863 | V>L | No |
ExAC TOPMed gnomAD ClinGen |
|
rs773169454 CA310112031 |
864 | L>F | No |
ExAC gnomAD ClinGen |
|
CA407445951 rs1297795144 |
866 | V>A | No |
gnomAD ClinGen |
|
rs897441623 CA310112033 |
866 | V>L | No |
TOPMed ClinGen |
|
rs766359239 CA310112038 |
867 | S>G | No |
ExAC gnomAD ClinGen |
|
rs556839625 CA310112040 |
867 | S>T | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
rs765436175 CA407446020 |
868 | R>L | No |
ExAC TOPMed gnomAD ClinGen |
|
rs765436175 CA310112045 |
868 | R>Q | No |
ExAC TOPMed gnomAD ClinGen |
|
rs754768995 CA310112042 |
868 | R>W | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1435418071 CA407446080 |
869 | E>G | No |
TOPMed ClinGen |
|
rs1202345960 CA407446046 |
869 | E>Q | No |
ClinGen gnomAD |
|
rs371936185 CA310112053 |
872 | H>Q | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs747136283 CA310112059 |
873 | L>V | No |
ExAC gnomAD ClinGen |
|
rs1421356083 CA407446241 |
874 | C>F | No |
TOPMed ClinGen |
|
CA310112063 rs757648263 |
877 | K>E | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310112069 rs781724918 |
879 | P>S | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407446415 rs1470792877 |
880 | I>L | No |
gnomAD ClinGen |
|
rs1173978652 CA407446439 |
880 | I>T | No |
ClinGen TOPMed gnomAD |
|
CA310112072 rs866207869 |
881 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
Ensembl ClinGen NCI-TCGA |
CA310112074 rs770383671 |
883 | T>I | No |
Ensembl ClinGen |
|
CA407446583 rs1290754298 |
884 | G>E | No |
TOPMed gnomAD ClinGen |
|
CA310112076 rs59779270 VAR_062140 |
884 | G>R | No |
1000Genomes ExAC gnomAD ClinGen UniProt dbSNP |
|
CA310112080 rs774123083 |
885 | V>L | No |
ExAC gnomAD ClinGen |
|
CA407446747 rs1222138359 |
888 | L>V | No |
gnomAD ClinGen |
|
rs1318629301 CA407446849 |
891 | G>C | No |
ClinGen TOPMed |
|
rs771785192 CA310112087 |
892 | L>* | No |
ClinGen ExAC gnomAD |
|
CA310112089 rs922105657 |
892 | L>F | No |
Ensembl ClinGen |
|
rs772546072 CA310112091 |
893 | R>G | No |
ExAC ClinGen |
|
rs200670245 CA310112093 |
895 | P>S | No |
1000Genomes ExAC gnomAD ClinGen |
|
TCGA novel | 895 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA407447092 rs1215450008 |
896 | E>D | No |
gnomAD ClinGen |
|
COSM3797534 rs990334364 CA310112100 |
896 | E>K | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
gnomAD ClinGen cosmic curated NCI-TCGA |
CA310112102 rs913254808 |
897 | C>G | No |
Ensembl ClinGen |
|
rs759308744 CA310112103 |
898 | K>R | No |
ClinGen ExAC gnomAD |
|
rs1446642439 CA407447173 |
899 | L>V | No |
Ensembl ClinGen |
|
rs778429134 CA407447194 |
900 | Q>* | No |
gnomAD ClinGen |
|
rs778429134 CA310112106 |
900 | Q>E | No |
gnomAD ClinGen |
|
rs749608473 CA310112114 CA310112112 |
900 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs201577263 CA310112108 |
900 | Q>P | No |
1000Genomes ExAC gnomAD ClinGen |
|
rs201577263 CA310112110 |
900 | Q>R | No |
1000Genomes ExAC gnomAD ClinGen |
|
TCGA novel | 903 | V>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1206435643 CA407450087 |
904 | L>V | No |
gnomAD ClinGen |
|
CA310113665 rs975071316 |
906 | N>I | No |
Ensembl ClinGen |
|
CA310113667 rs961505237 |
906 | N>K | No |
TOPMed ClinGen |
|
CA310113669 rs780716411 |
907 | C>R | No |
ExAC TOPMed gnomAD ClinGen |
|
TCGA novel | 908 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310113673 rs540940476 |
908 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
1000Genomes ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA407450293 rs1245055884 |
910 | T>A | No |
gnomAD ClinGen |
|
CA883736085 rs1184089421 |
911 | S>N | No |
gnomAD ClinGen |
|
CA310113682 rs746718511 |
912 | D>H | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310113681 rs746718511 |
912 | D>N | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407450406 rs746718511 |
912 | D>Y | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1568534692 CA407450449 |
913 | G>A | No |
Ensembl ClinGen |
|
CA407450457 rs1284867615 |
914 | C>R | No |
ClinGen TOPMed |
|
CA407450526 rs556462659 |
915 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA310113691 rs374020777 |
916 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
COSM140236 COSM140235 rs374020777 CA310113689 |
916 | D>N | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
CA310113693 rs374020777 |
916 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA310113695 rs749025165 |
917 | L>H | No |
ExAC gnomAD ClinGen |
|
rs768542757 CA310113697 |
918 | T>K | No |
ExAC gnomAD ClinGen |
|
rs768542757 CA310113699 |
918 | T>R | No |
ExAC gnomAD ClinGen |
|
rs145736130 CA310113702 |
920 | L>V | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs760838433 CA310113706 |
921 | L>V | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310113711 rs532961412 |
922 | Q>L | No |
1000Genomes ExAC gnomAD ClinGen |
|
CA407451013 rs1215931528 |
925 | S>P | No |
gnomAD ClinGen |
|
rs1317008433 CA407451082 |
926 | S>I | No |
gnomAD ClinGen |
|
CA407451177 rs1360051452 |
928 | L>F | No |
TOPMed ClinGen |
|
rs756877389 CA310113720 |
929 | C>G | No |
ExAC TOPMed gnomAD ClinGen |
|
rs780828249 CA310113722 |
929 | C>Y | No |
ExAC gnomAD ClinGen |
|
CA407451253 rs1250231732 |
930 | L>S | No |
TOPMed gnomAD ClinGen |
|
CA310113728 rs755680979 |
933 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC gnomAD ClinGen NCI-TCGA |
rs1480930650 CA407451421 |
934 | L>P | No |
TOPMed gnomAD ClinGen |
|
rs549386720 CA310113740 |
937 | I>L | No |
1000Genomes ExAC gnomAD ClinGen |
|
rs549386720 CA310113738 |
937 | I>V | No |
1000Genomes ExAC gnomAD ClinGen |
|
rs774146177 CA310113744 |
938 | G>E | No |
ClinGen ExAC gnomAD |
|
rs768507334 CA310113742 |
938 | G>R | No |
ExAC gnomAD ClinGen |
|
CA310113746 rs747904944 |
941 | G>E | No |
ExAC gnomAD ClinGen |
|
CA407451728 rs1275838648 |
942 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA407451688 rs1195848061 |
942 | M>V | No |
ClinGen TOPMed |
|
rs772349853 CA310113748 |
943 | K>N | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407451768 rs1339437216 |
943 | K>T | No |
gnomAD ClinGen |
|
rs773633093 CA310113750 |
944 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA310113756 rs766608991 |
946 | C>F | No |
ExAC gnomAD ClinGen |
|
rs1453006401 CA407451871 |
946 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs1170651049 CA407451951 |
948 | A>T | No |
TOPMed gnomAD ClinGen |
|
CA310113758 rs776608017 |
952 | P>Q | No |
ExAC gnomAD ClinGen |
|
rs753039885 CA310113764 |
954 | C>W | No |
ExAC gnomAD ClinGen |
|
CA407452291 rs993600678 |
955 | N>K | No |
gnomAD ClinGen |
|
rs528767497 CA310113766 |
955 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs199476220 RCV000089323 |
957 | R>missing | No |
ClinVar dbSNP |
|
CA310113773 rs767145179 |
957 | R>G | No |
ExAC gnomAD ClinGen |
|
rs755589146 CA310113777 |
957 | R>S | No |
ExAC gnomAD ClinGen |
|
CA310113775 rs750127014 |
957 | R>T | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1295793677 CA407452433 |
958 | C>S | No |
ClinGen gnomAD |
|
rs1405144466 CA407452475 |
959 | L>P | No |
gnomAD ClinGen |
|
CA310113782 rs753311022 |
960 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs753311022 CA407452490 |
960 | W>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA310114528 rs745948103 |
963 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA407455107 rs1454700460 |
966 | I>L | No |
TOPMed gnomAD ClinGen |
|
CA310114537 rs375615677 |
967 | P>A | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310114538 rs375615677 |
967 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ESP ExAC TOPMed gnomAD ClinGen NCI-TCGA |
CA310114542 rs368579702 |
968 | P>L | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs763409377 CA310114540 |
968 | P>S | No |
ExAC gnomAD ClinGen |
|
CA407455173 rs763409377 |
968 | P>T | No |
ExAC gnomAD ClinGen |
|
CA407455260 rs1264380677 |
970 | S>G | No |
gnomAD ClinGen |
|
CA310114547 rs139002081 |
970 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA310114549 rs371106626 |
971 | C>Y | No |
TOPMed gnomAD ClinGen |
|
CA407455374 rs1253425725 |
973 | D>G | No |
ClinGen gnomAD |
|
rs61735074 CA310114553 |
974 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1193397219 CA407455412 |
974 | L>P | No |
gnomAD ClinGen |
|
rs61735074 CA310114552 RCV000962759 |
974 | L>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA407455454 rs1476680668 |
975 | C>* | No |
ClinGen gnomAD |
|
CA310114558 rs201666813 |
975 | C>R | No |
1000Genomes ClinGen |
|
CA310114560 rs759061758 |
975 | C>Y | No |
ExAC TOPMed gnomAD ClinGen |
|
CA407455500 rs1406795048 |
976 | S>F | No |
gnomAD ClinGen |
|
rs1169674784 CA407455483 |
976 | S>P | No |
gnomAD ClinGen |
|
rs1568543269 CA407455566 |
978 | L>F | No |
Ensembl ClinGen |
|
TCGA novel | 978 | L>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310114564 rs764691889 |
979 | S>N | No |
ExAC gnomAD ClinGen |
|
TCGA novel | 979 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310114566 rs374346644 |
980 | C>S | No |
gnomAD ClinGen |
|
rs1422573843 CA407455677 |
981 | N>S | No |
ClinGen TOPMed |
|
rs752280342 CA310114569 |
982 | Q>R | No |
ExAC gnomAD ClinGen |
|
rs749548696 CA310114573 |
985 | V>I | No |
ExAC TOPMed gnomAD ClinGen |
|
rs978628851 CA310114575 |
990 | G>C | No |
gnomAD ClinGen |
|
TCGA novel | 992 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310114577 rs770971017 |
993 | P>H | No |
ClinGen TOPMed |
|
CA310114583 rs751399539 |
995 | G>E | No |
ExAC gnomAD ClinGen |
|
TCGA novel | 996 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA310114590 rs746119168 |
997 | S>N | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310114591 rs746119168 |
997 | S>T | No |
ExAC TOPMed gnomAD ClinGen |
|
CA310114596 rs779948334 |
1000 | K>R | No |
ExAC gnomAD ClinGen |
|
CA407456682 rs1568543541 |
1002 | L>R | No |
Ensembl ClinGen |
|
rs749383131 CA310114598 |
1002 | L>V | No |
ExAC TOPMed gnomAD ClinGen |
|
rs1275922699 CA407456793 |
1004 | E>D | No |
TOPMed ClinGen |
|
rs1228342338 CA407456794 |
1005 | T>P | No |
TOPMed ClinGen |
|
rs769085492 CA310114600 |
1008 | C>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA407456999 rs774901067 |
1010 | S>I | No |
ClinGen ExAC gnomAD |
|
CA310114601 rs774901067 |
1010 | S>N | No |
ClinGen ExAC gnomAD |
|
CA310114604 rs748495468 |
1011 | G>D | No |
ExAC TOPMed gnomAD ClinGen |
|
rs776314155 CA310114606 |
1012 | T>I | No |
ExAC gnomAD ClinGen |
|
rs759064470 CA310114608 |
1014 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA310114607 rs996672212 |
1014 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA310114611 rs775078034 |
1015 | T>A | No |
ExAC gnomAD ClinGen |
|
CA310114612 rs375435486 |
1015 | T>I | No |
ESP ExAC TOPMed ClinGen |
|
CA310114614 rs751596472 |
1017 | R>G | No |
ExAC gnomAD ClinGen |
|
CA310115435 rs12768 |
1020 | I>M | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
CA310115437 rs771471210 |
1021 | D>G | No |
ExAC gnomAD ClinGen |
|
rs747325012 CA310115436 COSM3797536 |
1021 | D>H | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
CA407460615 rs1164552934 |
1023 | F>L | No |
gnomAD ClinGen |
|
CA407460635 rs369767424 |
1023 | F>L | No |
ESP ExAC gnomAD ClinGen |
|
rs1467652508 CA407460687 |
1025 | D>N | No |
gnomAD ClinGen |
|
CA407460721 rs1164249967 |
1026 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
TOPMed ClinGen NCI-TCGA |
rs113044431 CA310115443 |
1028 | N>S | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs761389973 CA310115444 |
1029 | K>N | No |
ExAC gnomAD ClinGen |
|
rs986416135 CA407460850 |
1031 | L>P | No |
TOPMed gnomAD ClinGen |
|
rs986416135 CA310115446 |
1031 | L>Q | No |
TOPMed gnomAD ClinGen |
|
RCV000955575 CA310115447 rs61735075 |
1032 | E>V | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen ClinVar dbSNP |
|
CA310115450 rs373636948 |
1034 | I>R | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310115449 rs373636948 |
1034 | I>T | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs61735076 RCV000966078 CA310115448 |
1034 | I>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs753661640 CA310115451 |
1035 | E>A | No |
ExAC TOPMed gnomAD ClinGen |
|
TCGA novel | 1036 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs180727055 CA310115453 |
1037 | K>E | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
CA310115455 rs765452508 |
1038 | N>K | No |
ExAC gnomAD ClinGen |
|
rs745782532 | 1038 | N>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
rs752718361 CA310115456 |
1039 | P>Q | No |
ExAC gnomAD ClinGen |
|
rs1602466519 CA407461119 |
1040 | Q>P | No |
Ensembl ClinGen |
|
rs139504696 CA310115458 |
1042 | I>V | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
rs1568553530 CA407461298 COSM1741587 |
1046 | E>K | urinary_tract [Cosmic] | No |
Ensembl ClinGen cosmic curated |
CA407461422 rs1168964890 |
1050 | P>L | No |
ClinGen gnomAD |
|
CA407461421 rs1168964890 |
1050 | P>R | No |
ClinGen gnomAD |
|
CA310115459 rs778124002 |
1051 | W>* | No |
ExAC gnomAD ClinGen |
|
TCGA novel | 1051 | W>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1043673 VAR_020006 CA310115460 |
1052 | A>E | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen UniProt dbSNP |
|
CA310115461 rs757870937 |
1054 | R>G | No |
ExAC TOPMed gnomAD ClinGen |
|
rs768355874 CA310115465 |
1056 | S>P | No |
ExAC gnomAD ClinGen |
|
CA407461580 rs1340742935 |
1057 | S>F | No |
gnomAD ClinGen |
|
CA407461573 rs1568553637 |
1057 | S>T | No |
Ensembl ClinGen |
|
rs1220301290 CA407461589 |
1058 | H>D | No |
gnomAD ClinGen |
|
TCGA novel | 1058 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1059 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs149992714 CA310115468 |
1061 | M>L | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
rs149992714 CA310115469 |
1061 | M>V | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
CA310115470 rs866628349 |
1062 | I>M | No |
TOPMed ClinGen |
|
CA407461744 rs1219684077 |
1063 | I>L | No |
ClinGen gnomAD |
No associated diseases with Q9NX02
8 regional properties for Q9NX02
Type | Name | Position | InterPro Accession |
---|---|---|---|
repeat | Leucine-rich repeat | 810 - 831 | IPR001611-1 |
repeat | Leucine-rich repeat | 869 - 889 | IPR001611-2 |
repeat | Leucine-rich repeat | 925 - 946 | IPR001611-3 |
repeat | Leucine-rich repeat | 981 - 1002 | IPR001611-4 |
domain | DAPIN domain | 1 - 94 | IPR004020 |
domain | NACHT nucleoside triphosphatase | 207 - 405 | IPR007111 |
domain | NOD2, winged helix domain | 446 - 501 | IPR041075 |
domain | NACHT, LRR and PYD domains-containing protein, helical domain HD2 | 503 - 620 | IPR041267 |
4 GO annotations of cellular component
Name | Definition |
---|---|
cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
2 GO annotations of molecular function
Name | Definition |
---|---|
ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Pyrin domain binding | Binding to a Pyrin (PAAD/DAPIN) domain, a protein-protein interaction domain that has the same fold as the Death domain. |
8 GO annotations of biological process
Name | Definition |
---|---|
apoptotic process | A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. |
inflammatory response | The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. |
innate immune response | Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. |
negative regulation of NF-kappaB transcription factor activity | Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB. |
negative regulation of tumor necrosis factor-mediated signaling pathway | Any process that decreases the rate or extent of the tumor necrosis factor-mediated signaling pathway. The tumor necrosis factor-mediated signaling pathway is the series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor. |
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process | Any process that activates or increases the activity of a cysteine-type endopeptidase involved in the apoptotic process. |
positive regulation of interleukin-1 beta production | Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production. |
regulation of inflammatory response | Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. |
3 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q86W26 | NLRP10 | NACHT, LRR and PYD domains-containing protein 10 | Homo sapiens (Human) | PR |
Q96P20 | NLRP3 | NACHT, LRR and PYD domains-containing protein 3 | Homo sapiens (Human) | EV |
P59046 | NLRP12 | NACHT, LRR and PYD domains-containing protein 12 | Homo sapiens (Human) | SS |
10 | 20 | 30 | 40 | 50 | 60 |
MVSSAQMGFN | LQALLEQLSQ | DELSKFKYLI | TTFSLAHELQ | KIPHKEVDKA | DGKQLVEILT |
70 | 80 | 90 | 100 | 110 | 120 |
THCDSYWVEM | ASLQVFEKMH | RMDLSERAKD | EVREAALKSF | NKRKPLSLGI | TRKERPPLDV |
130 | 140 | 150 | 160 | 170 | 180 |
DEMLERFKTE | AQAFTETKGN | VICLGKEVFK | GKKPDKDNRC | RYILKTKFRE | MWKSWPGDSK |
190 | 200 | 210 | 220 | 230 | 240 |
EVQVMAERYK | MLIPFSNPRV | LPGPFSYTVV | LYGPAGLGKT | TLAQKLMLDW | AEDNLIHKFK |
250 | 260 | 270 | 280 | 290 | 300 |
YAFYLSCREL | SRLGPCSFAE | LVFRDWPELQ | DDIPHILAQA | RKILFVIDGF | DELGAAPGAL |
310 | 320 | 330 | 340 | 350 | 360 |
IEDICGDWEK | KKPVPVLLGS | LLNRVMLPKA | ALLVTTRPRA | LRDLRILAEE | PIYIRVEGFL |
370 | 380 | 390 | 400 | 410 | 420 |
EEDRRAYFLR | HFGDEDQAMR | AFELMRSNAA | LFQLGSAPAV | CWIVCTTLKL | QMEKGEDPVP |
430 | 440 | 450 | 460 | 470 | 480 |
TCLTRTGLFL | RFLCSRFPQG | AQLRGALRTL | SLLAAQGLWA | QTSVLHREDL | ERLGVQESDL |
490 | 500 | 510 | 520 | 530 | 540 |
RLFLDGDILR | QDRVSKGCYS | FIHLSFQQFL | TALFYTLEKE | EEEDRDGHTW | DIGDVQKLLS |
550 | 560 | 570 | 580 | 590 | 600 |
GVERLRNPDL | IQAGYYSFGL | ANEKRAKELE | ATFGCRMSPD | IKQELLRCDI | SCKGGHSTVT |
610 | 620 | 630 | 640 | 650 | 660 |
DLQELLGCLY | ESQEEELVKE | VMAQFKEISL | HLNAVDVVPS | SFCVKHCRNL | QKMSLQVIKE |
670 | 680 | 690 | 700 | 710 | 720 |
NLPENVTASE | SDAEVERSQD | DQHMLPFWTD | LCSIFGSNKD | LMGLAINDSF | LSASLVRILC |
730 | 740 | 750 | 760 | 770 | 780 |
EQIASDTCHL | QRVVFKNISP | ADAHRNLCLA | LRGHKTVTYL | TLQGNDQDDM | FPALCEVLRH |
790 | 800 | 810 | 820 | 830 | 840 |
PECNLRYLGL | VSCSATTQQW | ADLSLALEVN | QSLTCVNLSD | NELLDEGAKL | LYTTLRHPKC |
850 | 860 | 870 | 880 | 890 | 900 |
FLQRLSLENC | HLTEANCKDL | AAVLVVSREL | THLCLAKNPI | GNTGVKFLCE | GLRYPECKLQ |
910 | 920 | 930 | 940 | 950 | 960 |
TLVLWNCDIT | SDGCCDLTKL | LQEKSSLLCL | DLGLNHIGVK | GMKFLCEALR | KPLCNLRCLW |
970 | 980 | 990 | 1000 | 1010 | 1020 |
LWGCSIPPFS | CEDLCSALSC | NQSLVTLDLG | QNPLGSSGVK | MLFETLTCSS | GTLRTLRLKI |
1030 | 1040 | 1050 | 1060 | ||
DDFNDELNKL | LEEIEEKNPQ | LIIDTEKHHP | WAERPSSHDF | MI |