Q9LZJ6
Gene name |
ATL5 (At3g62690, F26K9_120) |
Protein name |
RING-H2 finger protein ATL5 |
Names |
RING-type E3 ubiquitin transferase ATL5 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G62690 |
EC number |
2.3.2.27: Aminoacyltransferases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LZJ6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LZJ6-F1 | Predicted | AlphaFoldDB |
29 variants for Q9LZJ6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH12889078 | 6 | D>H | No | 1000Genomes | |
| tmp_3_23186572_A_T | 11 | L>I | No | 1000Genomes | |
| ENSVATH06361758 | 15 | M>I | No | 1000Genomes | |
| tmp_3_23186542_G_C | 21 | R>G | No | 1000Genomes | |
| ENSVATH06361756 | 40 | V>I | No | 1000Genomes | |
| tmp_3_23186398_G_T | 69 | L>I | No | 1000Genomes | |
| ENSVATH12889054 | 74 | A>V | No | 1000Genomes | |
| tmp_3_23186372_G_C | 77 | D>E | No | 1000Genomes | |
| ENSVATH02538041 | 80 | Q>H | No | 1000Genomes | |
| ENSVATH12889053 | 91 | T>K | No | 1000Genomes | |
| ENSVATH12889052 | 92 | V>M | No | 1000Genomes | |
| ENSVATH06361755 | 94 | E>D | No | 1000Genomes | |
| ENSVATH06361754 | 109 | P>A | No | 1000Genomes | |
| ENSVATH12889050 | 119 | E>K | No | 1000Genomes | |
| ENSVATH06361751 | 122 | E>D | No | 1000Genomes | |
| ENSVATH12889049 | 125 | E>K | No | 1000Genomes | |
| ENSVATH00432731 | 171 | A>T | No | 1000Genomes | |
| ENSVATH06361748 | 194 | S>F | No | 1000Genomes | |
| ENSVATH02538039 | 198 | T>K | No | 1000Genomes | |
| tmp_3_23185954_C_T | 217 | E>K | No | 1000Genomes | |
| tmp_3_23185935_C_T | 223 | G>D | No | 1000Genomes | |
| tmp_3_23185913_C_G | 230 | R>S | No | 1000Genomes | |
| ENSVATH02538037 | 233 | Q>E | No | 1000Genomes | |
| ENSVATH00432729 | 236 | N>S | No | 1000Genomes | |
| ENSVATH06361747 | 241 | A>V | No | 1000Genomes | |
| ENSVATH06361746 | 245 | S>P | No | 1000Genomes | |
| ENSVATH02538035 | 247 | R>H | No | 1000Genomes | |
| ENSVATH02538036 | 247 | R>S | No | 1000Genomes | |
| tmp_3_23185858_C_G | 249 | A>P | No | 1000Genomes |
No associated diseases with Q9LZJ6
1 regional properties for Q9LZJ6
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Zinc finger, RING-type | 112 - 155 | IPR001841 |
Functions
| Description | ||
|---|---|---|
| EC Number | 2.3.2.27 | Aminoacyltransferases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| metal ion binding | Binding to a metal ion. |
| transferase activity | Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. |
| ubiquitin protein ligase binding | Binding to a ubiquitin protein ligase enzyme, any of the E3 proteins. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
| protein-containing complex assembly | The aggregation, arrangement and bonding together of a set of macromolecules to form a protein-containing complex. |
17 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9VE61 | CG7694 | E3 ubiquitin-protein ligase RNF181 homolog | Drosophila melanogaster (Fruit fly) | PR |
| O00237 | RNF103 | E3 ubiquitin-protein ligase RNF103 | Homo sapiens (Human) | PR |
| Q86Y13 | DZIP3 | E3 ubiquitin-protein ligase DZIP3 | Homo sapiens (Human) | PR |
| Q9Y3E7 | CHMP3 | Charged multivesicular body protein 3 | Homo sapiens (Human) | EV |
| Q9R1W3 | Rnf103 | E3 ubiquitin-protein ligase RNF103 | Mus musculus (Mouse) | PR |
| Q9EPZ8 | Rnf103 | E3 ubiquitin-protein ligase RNF103 | Rattus norvegicus (Rat) | PR |
| Q9ZV51 | ATL56 | RING-H2 finger protein ATL56 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SKK8 | ATL22 | RING-H2 finger protein ATL22 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0CH02 | ATL21B | Putative RING-H2 finger protein ATL21B | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0CH01 | ATL21A | Putative RING-H2 finger protein ATL21A | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GXF8 | SGR9 | E3 ubiquitin-protein ligase SGR9, amyloplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SI09 | XERICO | Probable E3 ubiquitin-protein ligase XERICO | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O22255 | ATL64 | RING-H2 finger protein ATL64 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GYT9 | SIS3 | E3 ubiquitin-protein ligase SIS3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8LGA5 | ATL31 | E3 ubiquitin-protein ligase ATL31 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8RXX9 | ATL6 | E3 ubiquitin-protein ligase ATL6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LUZ9 | ATL63 | RING-H2 finger protein ATL63 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGNLFDSSKT | LWGNMNHGSS | RYSLNGKIML | ASVIILFVAV | ILILCFHSYA | RWLFRRQNRR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IRRRISAHLR | SLAAARDPTQ | SSSSLSPLDP | TVLEKIPIFV | YSVKTHESPL | EECSVCLSEF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EEDDEGRVLP | KCGHVFHVDC | IDTWFRSRSS | CPLCRAPVQP | AQPVTEPEPV | AAVFPSVKPI |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EDTEAGSSSS | SDESESSTPS | SSSGSPVRFP | MEACEREPID | LVGIIVEIPR | EFQDSNSDLP |
| 250 | |||||
| ADNGSNRRAS | LKRLWII |