Q9LSD2

PR
Gene name
At3g27040 (MOJ10.11)
Protein name
MATH domain and coiled-coil domain-containing protein At3g27040
Names
RTM3-like protein At3g27040
Species
Arabidopsis thaliana (Mouse-ear cress)
KEGG Pathway
ath:AT3G27040
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

210-271 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q9LSD2

Entry ID Method Resolution Chain Position Source
AF-Q9LSD2-F1 Predicted AlphaFoldDB

131 variants for Q9LSD2

Variant ID(s) Position Change Description Diseaes Association Provenance
ENSVATH11040942 2 G>E No 1000Genomes
ENSVATH11040941 3 N>T No 1000Genomes
ENSVATH02216171 4 H>R No 1000Genomes
tmp_3_9976153_G_A 4 H>Y No 1000Genomes
tmp_3_9976146_G_A 6 A>V No 1000Genomes
tmp_3_9976141_TATCAG_CATCAG,T 8 K>E No 1000Genomes
ENSVATH14028258 14 I>N No 1000Genomes
ENSVATH00354446 15 K>M No 1000Genomes
ENSVATH11040939 21 G>D No 1000Genomes
tmp_3_9976095_C_T 23 G>D No 1000Genomes
ENSVATH02216170 23 G>S No 1000Genomes
ENSVATH00354445 24 S>N No 1000Genomes
ENSVATH11040938 27 S>F No 1000Genomes
ENSVATH11040938 27 S>Y No 1000Genomes
tmp_3_9976068_G_A 32 A>V No 1000Genomes
ENSVATH02216168 33 G>A No 1000Genomes
ENSVATH02216168 33 G>D No 1000Genomes
ENSVATH11040924 33 G>S No 1000Genomes
ENSVATH11040923 34 R>C No 1000Genomes
ENSVATH14028257 38 R>C No 1000Genomes
ENSVATH05931968 41 A>V No 1000Genomes
ENSVATH11040922 43 P>S No 1000Genomes
ENSVATH11040921 44 K>N No 1000Genomes
ENSVATH02216163 45 G>E No 1000Genomes
ENSVATH05931967 45 G>R No 1000Genomes
ENSVATH11040919 51 Y>C No 1000Genomes
tmp_3_9975929_A_G 52 F>L No 1000Genomes
ENSVATH11040918 53 F>S No 1000Genomes
ENSVATH11040917 54 L>R No 1000Genomes
ENSVATH02216161 57 C>Y No 1000Genomes
tmp_3_9975908_G_A 59 P>S No 1000Genomes
ENSVATH05931966 63 S>P No 1000Genomes
ENSVATH11040916 64 L>F No 1000Genomes
ENSVATH02216160
tmp_3_9975880_C_T
 68 W>* No 1000Genomes
ENSVATH02216159 70 R>K No 1000Genomes
ENSVATH11040915 71 R>H No 1000Genomes
ENSVATH11040903 72 A>D No 1000Genomes
ENSVATH11040904 72 A>T No 1000Genomes
ENSVATH11040903 72 A>V No 1000Genomes
ENSVATH05931964 73 K>N No 1000Genomes
ENSVATH02216158 74 V>F No 1000Genomes
ENSVATH11040902 76 F>L No 1000Genomes
ENSVATH05931962 81 Q>H No 1000Genomes
tmp_3_9975835_G_A 83 P>L No 1000Genomes
ENSVATH14028256 85 G>* No 1000Genomes
ENSVATH11040901 85 G>E No 1000Genomes
ENSVATH14028256 85 G>R No 1000Genomes
tmp_3_9975824_A_C 87 S>A No 1000Genomes
ENSVATH05931961 87 S>F No 1000Genomes
ENSVATH05931960 90 R>Q No 1000Genomes
ENSVATH00354444 91 E>K No 1000Genomes
ENSVATH02216156 92 A>V No 1000Genomes
tmp_3_9975659_A_T 93 V>E No 1000Genomes
tmp_3_9975660_C_G 93 V>L No 1000Genomes
tmp_3_9975641_T_G 99 K>T No 1000Genomes
ENSVATH14028244 100 D>E No 1000Genomes
tmp_3_9975639_C_T 100 D>N No 1000Genomes
tmp_3_9975636_T_A 101 T>S No 1000Genomes
tmp_3_9975628_A_C 103 H>Q No 1000Genomes
ENSVATH11040844 104 G>V No 1000Genomes
tmp_3_9975621_C_G 106 E>Q No 1000Genomes
tmp_3_9975608_A_C 110 L>R No 1000Genomes
tmp_3_9975605_A_C 111 L>R No 1000Genomes
tmp_3_9975602_G_A 112 S>L No 1000Genomes
ENSVATH05931952 113 E>D No 1000Genomes
ENSVATH05931951 114 I>F No 1000Genomes
ENSVATH05931951 114 I>L No 1000Genomes
ENSVATH11040843 115 Q>E No 1000Genomes
ENSVATH00354439 115 Q>H No 1000Genomes
tmp_3_9975593_TG_CG,T 115 Q>R No 1000Genomes
tmp_3_9975591_T_C 116 S>G No 1000Genomes
tmp_3_9975590_C_A 116 S>I No 1000Genomes
ENSVATH11040842 118 D>E No 1000Genomes
ENSVATH05931949 123 V>L No 1000Genomes
ENSVATH11040839 124 N>D No 1000Genomes
tmp_3_9975564_C_T 125 G>R No 1000Genomes
ENSVATH02216155 128 K>* No 1000Genomes
tmp_3_9975548_A_G 130 V>A No 1000Genomes
ENSVATH05931948 130 V>I No 1000Genomes
ENSVATH11040837 132 E>K No 1000Genomes
tmp_3_9975540_C_T 133 V>I No 1000Genomes
ENSVATH05931947 136 L>F No 1000Genomes
ENSVATH14028243 144 V>L No 1000Genomes
ENSVATH14028242 146 E>D No 1000Genomes
ENSVATH11040836 146 E>K No 1000Genomes
tmp_3_9975498_C_A 147 E>* No 1000Genomes
ENSVATH11040835 150 R>S No 1000Genomes
ENSVATH11040823 156 F>L No 1000Genomes
ENSVATH11040824 156 F>Y No 1000Genomes
ENSVATH11040822 157 Q>E No 1000Genomes
ENSVATH11040821 158 V>I No 1000Genomes
ENSVATH11040818 159 P>L No 1000Genomes
ENSVATH14028241 160 A>D No 1000Genomes
ENSVATH11040817 160 A>T No 1000Genomes
tmp_3_9975455_G_A 161 S>L No 1000Genomes
ENSVATH05931945 162 Q>H No 1000Genomes
tmp_3_9975234_G_A 165 S>F No 1000Genomes
tmp_3_9975230_C_T 166 M>I No 1000Genomes
tmp_3_9975220_A_T 170 F>I No 1000Genomes
ENSVATH05931934 172 K>N No 1000Genomes
tmp_3_9975214_T_G 172 K>Q No 1000Genomes
tmp_3_9975213_T_C 172 K>R No 1000Genomes
tmp_3_9975207_C_T 174 R>Q No 1000Genomes
tmp_3_9975205_C_T 175 G>S No 1000Genomes
ENSVATH11040768 182 P>S No 1000Genomes
ENSVATH11040767 187 L>Q No 1000Genomes
ENSVATH11040766 192 L>M No 1000Genomes
tmp_3_9975141_A_G 196 L>P No 1000Genomes
tmp_3_9975134_C_T 198 M>I No 1000Genomes
tmp_3_9975136_T_G 198 M>L No 1000Genomes
ENSVATH11040765 200 E>K No 1000Genomes
ENSVATH05931931 203 C>S No 1000Genomes
ENSVATH00354435 205 F>S No 1000Genomes
ENSVATH05931930 206 P>A No 1000Genomes
tmp_3_9975111_G_A 206 P>L No 1000Genomes
ENSVATH05931929 207 E>K No 1000Genomes
tmp_3_9975106_C_A 208 E>* No 1000Genomes
ENSVATH05931926 210 S>T No 1000Genomes
ENSVATH05931925 210 S>Y No 1000Genomes
tmp_3_9975096_C_T 211 S>N No 1000Genomes
ENSVATH14028236 215 A>V No 1000Genomes
ENSVATH05931924 220 A>T No 1000Genomes
tmp_3_9975058_C_T 224 V>I No 1000Genomes
ENSVATH05931923 228 G>E No 1000Genomes
ENSVATH00354434 243 K>N No 1000Genomes
ENSVATH02216148 248 E>K No 1000Genomes
ENSVATH14028235 253 L>* No 1000Genomes
ENSVATH05931919 261 A>T No 1000Genomes
ENSVATH00354433 268 D>E No 1000Genomes
ENSVATH11040713 270 L>F No 1000Genomes
ENSVATH14028194 271 R>* No 1000Genomes

No associated diseases with Q9LSD2

3 regional properties for Q9LSD2

Type Name Position InterPro Accession
domain Homeobox domain 89 - 153 IPR001356
domain Leucine zipper, homeobox-associated 149 - 192 IPR003106
conserved_site Homeobox, conserved site 124 - 147 IPR017970

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

No GO annotations of molecular function

Name Definition
No GO annotations for molecular function

No GO annotations of biological process

Name Definition
No GO annotations for biological process

15 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q6IQ16 SPOPL Speckle-type POZ protein-like Homo sapiens (Human) PR
Q6YCH2 Tdpoz4 TD and POZ domain-containing protein 4 Mus musculus (Mouse) PR
Q2M2N2 Spopl Speckle-type POZ protein-like Mus musculus (Mouse) PR
P34371 bath-42 BTB and MATH domain-containing protein 42 Caenorhabditis elegans PR
F4IN32 At2g42460 MATH domain and coiled-coil domain-containing protein At2g42460 Arabidopsis thaliana (Mouse-ear cress) PR
F4J4A0 At3g44790 MATH domain and coiled-coil domain-containing protein At3g44790 Arabidopsis thaliana (Mouse-ear cress) PR
F4J4A1 At3g44800 MATH domain and coiled-coil domain-containing protein At3g44800 Arabidopsis thaliana (Mouse-ear cress) PR
P0DKG7 At2g42480 MATH domain and coiled-coil domain-containing protein At2g42480 Arabidopsis thaliana (Mouse-ear cress) PR
Q9M2I2 At3g58340 MATH domain and coiled-coil domain-containing protein At3g58340 Arabidopsis thaliana (Mouse-ear cress) PR
Q9M2J0 At3g58260 MATH domain and coiled-coil domain-containing protein At3g58260 Arabidopsis thaliana (Mouse-ear cress) PR
Q9M2J5 At3g58210 MATH domain and coiled-coil domain-containing protein At3g58210 Arabidopsis thaliana (Mouse-ear cress) PR
Q9ZUA7 At2g01790 MATH domain and coiled-coil domain-containing protein At2g01790 Arabidopsis thaliana (Mouse-ear cress) PR
P0DKG4 At2g42465 MATH domain and coiled-coil domain-containing protein At2g42465 Arabidopsis thaliana (Mouse-ear cress) PR
Q9SHT3 At2g05410 MATH domain and coiled-coil domain-containing protein At2g05410 Arabidopsis thaliana (Mouse-ear cress) PR
F4J4P8 At3g58220 MATH domain and coiled-coil domain-containing protein At3g58220 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MGNHQADKKF TWVIKNYNSL GSGSVYSDTF KAGRCKWRLL AFPKGNNIYD YFFLYICVPN
70 80 90 100 110 120
SESLPSGWRR RAKVSFTMVN QIPGGLSQQR EAVYWFDEKD TTHGFESMFL LSEIQSSDKG
130 140 150 160 170 180
FLVNGEVKIV AEVDVLEVIG ELDVPEEPER IDINGFQVPA SQVESMNSLF EKYRGFASKI
190 200 210 220 230 240
FPKNQHLRKT FLDVVLSMTE ILCKFPEELS SGDLAEAYSA LRFVTKAGFK LDWLEKKLKE
250 260 270
TGKSRLQEIE EDLKDLKVKC ADMDALLDFL R