Q9LIM6
Gene name |
At3g26490 (F20C19.23) |
Protein name |
BTB/POZ domain-containing protein At3g26490 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G26490 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LIM6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LIM6-F1 | Predicted | AlphaFoldDB |
63 variants for Q9LIM6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_3_9704181_T_G | 14 | Y>D | No | 1000Genomes | |
| ENSVATH02211628 | 52 | R>H | No | 1000Genomes | |
| tmp_3_9704506_A_C | 60 | Q>H | No | 1000Genomes | |
| tmp_3_9704511_C_T | 62 | T>I | No | 1000Genomes | |
| ENSVATH02211629 | 79 | E>G | No | 1000Genomes | |
| tmp_3_9704570_G_A | 82 | A>T | No | 1000Genomes | |
| ENSVATH11017601 | 110 | E>D | No | 1000Genomes | |
| ENSVATH05925668 | 118 | V>L | No | 1000Genomes | |
| ENSVATH05925668 | 118 | V>M | No | 1000Genomes | |
| ENSVATH00352714 | 123 | T>R | No | 1000Genomes | |
| ENSVATH05925669 | 137 | C>F | No | 1000Genomes | |
| tmp_3_9704834_G_C | 170 | E>Q | No | 1000Genomes | |
| ENSVATH00352716 | 177 | T>N | No | 1000Genomes | |
| ENSVATH05925671 | 183 | D>Y | No | 1000Genomes | |
| ENSVATH00352717 | 195 | N>D | No | 1000Genomes | |
| ENSVATH00352717 | 195 | N>Y | No | 1000Genomes | |
| ENSVATH02211635 | 204 | I>M | No | 1000Genomes | |
| ENSVATH02211634 | 204 | I>N | No | 1000Genomes | |
| ENSVATH05925672 | 204 | I>V | No | 1000Genomes | |
| tmp_3_9704942_T_G | 206 | C>G | No | 1000Genomes | |
| ENSVATH11017602 | 207 | N>K | No | 1000Genomes | |
| tmp_3_9704969_G_A | 215 | E>K | No | 1000Genomes | |
| ENSVATH11017603 | 217 | L>S | No | 1000Genomes | |
| ENSVATH02211636 | 240 | K>I | No | 1000Genomes | |
| ENSVATH00352718 | 243 | H>N | No | 1000Genomes | |
| ENSVATH14021688 | 243 | H>P | No | 1000Genomes | |
| tmp_3_9705102_C_A | 259 | A>E | No | 1000Genomes | |
| ENSVATH00352719 | 267 | Q>E | No | 1000Genomes | |
| ENSVATH14021689 | 268 | E>V | No | 1000Genomes | |
| ENSVATH11017655 | 269 | S>G | No | 1000Genomes | |
| ENSVATH02211639 | 314 | M>T | No | 1000Genomes | |
| tmp_3_9705275_G_A | 317 | A>T | No | 1000Genomes | |
| ENSVATH05925675 | 328 | T>I | No | 1000Genomes | |
| ENSVATH11017658 | 342 | M>I | No | 1000Genomes | |
| tmp_3_9705356_T_C | 344 | Y>H | No | 1000Genomes | |
| ENSVATH05925676 | 377 | R>C | No | 1000Genomes | |
| ENSVATH05925676 | 377 | R>G | No | 1000Genomes | |
| tmp_3_9705467_A_C | 381 | N>H | No | 1000Genomes | |
| tmp_3_9705500_G_C | 392 | G>R | No | 1000Genomes | |
| ENSVATH05925679 | 404 | L>W | No | 1000Genomes | |
| ENSVATH11017661 | 411 | V>L | No | 1000Genomes | |
| ENSVATH05925680 | 414 | Y>S | No | 1000Genomes | |
| ENSVATH11017662 | 433 | A>V | No | 1000Genomes | |
| ENSVATH00352720 | 437 | P>S | No | 1000Genomes | |
| ENSVATH02211643 | 439 | T>S | No | 1000Genomes | |
| ENSVATH05925681 | 449 | N>D | No | 1000Genomes | |
| tmp_3_9705675_C_G,T | 450 | A>G | No | 1000Genomes | |
| tmp_3_9705675_C_G,T | 450 | A>V | No | 1000Genomes | |
| tmp_3_9705778_G_A | 462 | E>K | No | 1000Genomes | |
| ENSVATH14021691 | 482 | A>V | No | 1000Genomes | |
| tmp_3_9705851_C_T | 486 | A>V | No | 1000Genomes | |
| tmp_3_9705895_C_A | 501 | L>I | No | 1000Genomes | |
| ENSVATH11017685 | 513 | T>R | No | 1000Genomes | |
| ENSVATH00352723 | 514 | R>T | No | 1000Genomes | |
| tmp_3_9705941_A_G | 516 | N>S | No | 1000Genomes | |
| tmp_3_9705952_A_G | 520 | N>D | No | 1000Genomes | |
| ENSVATH05925684 | 520 | N>K | No | 1000Genomes | |
| ENSVATH11017688 | 539 | E>K | No | 1000Genomes | |
| tmp_3_9706029_A_C | 545 | E>D | No | 1000Genomes | |
| tmp_3_9706067_C_G | 558 | S>W | No | 1000Genomes | |
| ENSVATH11017689 | 565 | A>V | No | 1000Genomes | |
| ENSVATH02211646 | 573 | L>M | No | 1000Genomes | |
| ENSVATH11017690 | 583 | S>R | No | 1000Genomes |
No associated diseases with Q9LIM6
1 regional properties for Q9LIM6
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | NPH3 domain | 218 - 507 | IPR027356 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
4 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9LFU0 | DOT3 | BTB/POZ domain-containing protein DOT3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LUB9 | At5g48130 | BTB/POZ domain-containing protein At5g48130 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8LPQ3 | At3g50840 | BTB/POZ domain-containing protein At3g50840 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FYC8 | At3g44820 | BTB/POZ domain-containing protein At3g44820 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKFMELGFRP | DTFYTVESVR | SVSSDLLNDL | VIQVKSTKYL | LHKFPMLSKC | LRLKNLVSSQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ETETSQEQQV | IQLVDFPGET | EAFELCAKFC | YGITITLCAH | NVVAVRCAAE | YLGMTEEVEL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GETENLVQRL | ELFLTTCVFK | SWRDSYVTLQ | TTKVLPLWSE | DLGITNRCIE | AIANGVTVSP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| GEDFSTQLET | GLLRNRSRIR | RDEILCNGGG | GSKAESLRWW | GEDLAELGLD | LYRRTMVAIK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SSHRKISPRL | IGNALRIYAS | KWLPSIQESS | ADSNLVLESV | ISLLPEEKSS | VPCSFLLQLL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KMANVMNVSH | SSKMELAIKA | GNQLDKATVS | ELLIPLSDKS | GMLYDVDVVK | MMVKQFLSHI |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SPEIRPTRTR | TEHRRSRSEE | NINLEEIQEV | RGSLSTSSSP | PPLLSKVAKL | VDSYLQEIAR |
| 430 | 440 | 450 | 460 | 470 | 480 |
| DVNLTVSKFV | ELAETIPDTS | RICHDDLYNA | IDVYLQVHKK | IEKCERKRLC | RILDCKKLSV |
| 490 | 500 | 510 | 520 | 530 | 540 |
| EASKKAAQNE | LLPLRVIVQI | LFVEQARATL | ATTRNNITTN | ETAVLKRSFT | TRREEGGQEE |
| 550 | 560 | 570 | 580 | ||
| EERDETKPSG | GFLQSTPSRF | MALCAIPRQP | KKLLCKLLSI | SRSLSQRI |