Q9HC29
Gene name |
NOD2 (CARD15, IBD1) |
Protein name |
Nucleotide-binding oligomerization domain-containing protein 2 |
Names |
Caspase recruitment domain-containing protein 15, Inflammatory bowel disease protein 1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:64127 |
EC number |
|
Protein Class |
NACHT, LRR AND CARD DOMAINS-CONTAINING (PTHR24106) |

Descriptions
NOD2, a NOD-like receptor (NLR), is an intracellular sensor of bacterial muramyl dipeptide (MDP) that promotes secretion of the proinflammatory cytokine IL-1β. NOT2 through its N-terminal caspase recruitment domain directly binds and activates caspase-1 to trigger IL-1β processing and secretion in MDP-stimulated macrophages, whereas the C-terminal leucine-rich repeats (LRR) of NOD2 prevent caspase-1 activation in non-stimulated cells. Removal of the LRR rendered NOD2 a constitutive activator of pro-IL-1β processing and caspase-1.
Autoinhibitory domains (AIDs)
Target domain |
26-218 (CARD domains) |
Relief mechanism |
Partner binding |
Assay |
Deletion assay |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

1 structures for Q9HC29
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
AF-Q9HC29-F1 | Predicted | AlphaFoldDB |
952 variants for Q9HC29
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
RCV000638039 rs765406921 |
1 | M>T | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA281248056 rs976567823 RCV000638059 |
3 | E>Q | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
CA395865277 rs1567380372 RCV000705663 |
35 | Q>* | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV000084075 CA150175 rs104895487 |
38 | R>M | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA8051203 RCV000533853 rs200089552 |
43 | E>K | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000258045 rs34936594 VAR_036871 CA8051231 |
81 | L>V | Behcet disease [ClinVar] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
CA8051234 rs374128251 RCV000698531 |
87 | R>C | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000778464 rs761449474 CA8051241 |
93 | W>* | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV000638053 CA8051250 rs202052365 |
105 | A>V | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
VAR_073228 rs104895468 CA150330 RCV000084133 |
113 | D>N | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
RCV000703634 rs1567381106 |
137 | H>missing | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs34684955 VAR_012665 CA8051275 |
140 | A>T | IBD1; also found in patients with ulcerative colitis; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
VAR_012666 rs104895420 RCV000084135 CA150336 |
157 | W>R | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
CA281250492 rs150996156 COSM1239612 RCV000638046 |
159 | R>Q | oesophagus Blau syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP TOPMed dbSNP gnomAD |
RCV000704742 rs143080077 CA8051336 |
209 | P>S | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000638040 CA8051377 rs369098290 |
233 | Q>P | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
VAR_012668 CA150339 rs104895422 |
235 | R>C | IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV000638055 CA395867405 rs1001861018 |
238 | S>C | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
CA150342 rs104895423 VAR_012669 |
248 | L>R | IBD1; unknown pathological significance; no disruption of NOD2-CARD9 interaction [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001198645 rs1437917228 |
277 | G>D | Susceptibility to Yao syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001218599 rs1964431434 |
288 | L>missing | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA150345 VAR_012672 rs104895424 RCV000084139 |
291 | D>N | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
rs104895425 VAR_012673 CA150348 |
294 | T>S | IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs104895426 RCV000084141 VAR_012674 CA150351 |
301 | A>V | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
rs104895427 CA150354 VAR_012675 COSM1172338 |
311 | R>W | oesophagus IBD1; also found in patients with ulcerative colitis; unknown pathological significance [Cosmic, UniProt] | Yes |
ClinGen cosmic curated UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV000700396 CA117018 RCV000004958 VAR_012676 RCV000482720 rs104895461 |
334 | R>Q | BLAUS; somatic mosaicism in 4.9% to 11% of peripheral blood cells; hyperactive; abolishes interaction with LDOC1, ANKHD1, PPP2R3B, ENTR1 and TRIM41; decreases interaction with RIPK2 and PPP1R12C; no effect on interaction with CHMP5 Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
VAR_012677 rs104895462 RCV000004960 CA117022 RCV000638054 |
334 | R>W | BLAUS; no disruption of NOD2-CARD9 interaction; hyperactive Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV000705477 CA8051442 rs369732140 |
343 | L>P | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
CA8051448 rs759520552 RCV001215275 |
346 | R>Q | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
VAR_012678 rs104895428 CA150163 RCV000084071 |
348 | L>V | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
CA10602671 RCV000258859 rs752615209 |
349 | L>F | Behcet disease [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs5743272 VAR_012679 CA8051452 |
352 | H>R | IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA150166 RCV000084072 rs104895488 |
355 | W>* | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
VAR_073229 CA150169 rs104895469 |
357 | D>A | IBD1; unknown pathological significance; no disruption of NOD2-CARD9 interaction [UniProt] | Yes |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
rs766265864 RCV001237247 |
362 | D>missing | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA150172 VAR_073230 RCV000686592 RCV000084074 rs104895470 |
363 | I>F | IBD1; unknown pathological significance; no disruption of NOD2-CARD9 interaction Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
rs1964452487 RCV001051529 |
368 | L>P | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
VAR_012680 rs145293873 CA150374 RCV000084160 |
373 | R>C | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
rs1964456255 RCV001040250 |
380 | G>D | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
VAR_023822 RCV000416482 rs104895476 CA117027 |
382 | D>E | BLAUS; hyperactive Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
rs104895493 RCV000084077 VAR_073231 CA150178 |
383 | E>G | Blau syndrome BLAUS; unknown pathological significance; hyperactive [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV000638049 rs104895477 VAR_023823 CA117031 RCV000004966 |
383 | E>K | BLAUS; hyperactive Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
RCV000706392 CA8051476 rs777343284 |
384 | F>Y | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA150181 RCV002055243 RCV000084078 VAR_073232 rs104895481 |
391 | R>C | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
RCV000686777 rs140918872 CA8051485 |
393 | R>H | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
RCV000694007 rs104895429 VAR_012681 CA150184 RCV000084079 |
414 | N>S | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
RCV000638045 CA8051502 rs562225614 |
426 | R>H | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs766651775 RCV000638078 CA8051504 |
427 | P>L | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000638042 rs760982375 CA8051503 |
427 | P>S | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
VAR_012682 CA150190 rs104895431 |
431 | S>L | IBD1; unknown pathological significance; no disruption of NOD2-CARD9 interaction [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs2076754 COSM471799 CA8051510 VAR_012683 |
432 | A>V | kidney IBD1; unknown pathological significance [Cosmic, UniProt] | Yes |
ClinGen cosmic curated UniProt ESP ExAC TOPMed dbSNP gnomAD |
CA150193 COSM971300 VAR_012684 rs104895432 |
441 | E>K | IBD1; unknown pathological significance; no disruption of NOD2-CARD9 interaction endometrium [UniProt, Cosmic] | Yes |
ClinGen cosmic curated UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
VAR_073233 RCV000084084 rs104895482 CA150199 |
463 | P>A | no disruption of NOD2-CARD9 interaction Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
VAR_073234 rs104895492 RCV000084085 CA150202 |
464 | G>W | Blau syndrome hyperactive [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
RCV000699576 CA281262646 rs769988393 |
468 | R>S | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
VAR_012685 CA117020 RCV000004959 rs104895460 |
469 | L>F | BLAUS; hyperactive Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
rs1567392113 CA395868899 RCV000696354 |
476 | T>N | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV000084087 rs104895494 CA150205 VAR_073235 |
481 | G>D | BLAUS; atypical form with cardiac infiltration; sporadic case; unknown pathological significance; hyperactive Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
CA150208 rs104895480 RCV000084088 VAR_073236 |
490 | W>L | Blau syndrome BLAUS; unknown pathological significance; hyperactive [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
CA150211 VAR_073237 RCV000084089 rs104895478 |
495 | C>Y | Blau syndrome BLAUS; unknown pathological significance; hyperactive [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
VAR_023824 rs104895472 CA117025 RCV000416481 |
496 | H>L | BLAUS; hyperactive Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
CA395869044 rs1361409611 RCV000685064 |
498 | E>D | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV001035655 rs1964491198 |
500 | L>* | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV000638050 rs754761524 |
506 | S>missing | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV000691147 rs754761524 |
506 | S>missing | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA150217 VAR_073238 rs104895473 RCV000084091 |
513 | M>T | BLAUS; hyperactive Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
rs1964496675 RCV001345890 |
519 | Q>* | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA395869201 rs1283801598 RCV000702551 |
525 | A>T | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs754073471 RCV000778465 |
529 | D>missing | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs1567392735 CA395869267 RCV000768027 |
537 | P>H | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV000705559 rs772534917 CA395869300 |
543 | R>H | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV000084093 VAR_073239 rs104895471 CA150222 |
550 | L>V | IBD1; unknown pathological significance; no disruption of NOD2-CARD9 interaction Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV000084094 rs104895436 |
558 | L>missing | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs1264862631 RCV001045704 |
574 | Q>E | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA150228 VAR_073240 RCV001092928 RCV000084095 rs104895479 |
587 | R>C | BLAUS; unknown pathological significance; not hyperactive Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
rs373185098 CA8051619 RCV000690943 |
587 | R>H | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000084097 rs104895474 VAR_073241 CA150234 |
605 | T>P | BLAUS; hyperactive Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
CA8051634 rs104895438 RCV000293577 RCV000385541 |
612 | A>S | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
VAR_012686 rs104895438 CA117029 |
612 | A>T | BLAUS and IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
VAR_012687 RCV000084098 CA150236 rs104895439 |
612 | A>V | IBD1; unknown pathological significance; no disruption of NOD2-CARD9 interaction Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
CA395870231 rs1228502653 RCV001037026 |
645 | P>T | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
rs150236752 CA8051658 RCV000698270 |
657 | S>G | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs104895475 CA150239 RCV000084099 VAR_073242 |
670 | N>K | BLAUS; hyperactive Blau syndrome [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
CA395870549 rs104895475 RCV000761493 |
670 | N>K | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs371339573 CA8051678 RCV000560264 |
680 | G>R | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs5743276 CA8051682 VAR_012688 |
684 | R>W | IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA213414 VAR_012689 rs2066844 |
702 | R>W | IBD1 and YAOS; associated with disease susceptibility; no disruption of NOD2-CARD9 interaction; decreases half-life of protein; abolishes interaction with ANKHD1, ENTR1 and TRIM41; increases interaction with RIPK2 and PPP2R3B; decreases interaction with LDOC1 and PPP1R12C; no effect on interaction with CHMP5 [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs5743277 VAR_012690 CA202825 |
703 | R>C | IBD1; also found in patients with ulcerative colitis; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA8051693 rs5743277 RCV001222153 |
703 | R>G | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs755721919 CA8051695 RCV001245267 |
704 | Q>* | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA8051705 RCV001267780 rs776701942 |
709 | W>* | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs104895440 RCV000084100 CA150241 RCV000658747 VAR_012691 |
713 | R>C | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
VAR_073243 CA150244 rs104895483 |
713 | R>H | IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
CA8051714 rs5743278 VAR_012692 |
725 | A>G | IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs104895489 RCV000084102 COSM1259275 CA150247 |
727 | P>L | oesophagus Blau syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000258056 CA10590111 rs746055479 |
733 | V>L | Behcet disease [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001281018 rs746055479 CA8051720 |
733 | V>M | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs61747625 CA8051743 VAR_012693 |
755 | A>V | IBD1; also found in patients with ulcerative colitis; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
COSM1378211 rs375713299 RCV000697116 CA8051745 |
756 | R>Q | pancreas large_intestine Blau syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs376201089 CA8051744 RCV000685885 |
756 | R>W | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000084104 CA150253 rs104895442 VAR_012694 |
758 | A>V | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
CA8051747 VAR_073244 rs3813758 |
760 | R>C | IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
RCV000698432 CA8051748 rs763955590 |
760 | R>H | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs1266638330 RCV001230837 CA395871755 |
769 | L>F | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
VAR_012695 CA150256 rs104895443 |
778 | E>K | IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
COSM1378212 rs62029861 VAR_073245 CA8051761 |
790 | R>W | large_intestine IBD1; unknown pathological significance [Cosmic, UniProt] | Yes |
ClinGen cosmic curated UniProt ExAC TOPMed dbSNP gnomAD |
CA150265 VAR_012696 rs104895444 |
793 | V>M | IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV000701539 rs748522514 CA8051769 |
807 | V>M | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA10590109 RCV000258046 rs886040969 |
816 | V>I | Behcet disease [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA150271 rs104895485 RCV000084110 VAR_073247 |
825 | N>K | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
CA8051801 rs760623178 RCV001208985 RCV001786450 |
830 | R>* | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001048362 rs1964807205 |
834 | K>Q | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs757680896 RCV001038814 CA8051810 |
839 | A>S | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV001218557 CA8051812 rs146313066 |
842 | C>R | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000084111 CA150274 VAR_012697 rs104895445 |
843 | E>K | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
rs104895467 VAR_073249 CA150280 |
852 | N>S | IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV000084114 VAR_012698 rs104895446 CA150283 |
853 | N>S | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV000627499 rs1555500626 RCV001868166 |
859 | C>missing | Blau syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA8051848 rs754270929 RCV000819356 |
860 | A>T | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs104895447 VAR_012699 CA150286 |
863 | M>V | IBD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA8051857 rs768889214 RCV001062118 |
870 | R>K | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs199552944 RCV000638047 CA8051927 |
900 | S>F | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA150296 RCV000084121 rs104895490 |
907 | W>R | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
rs2066845 CA117015 VAR_012701 |
908 | G>R | IBD1 and YAOS; associated with disease susceptibility; decreases half-life of protein; abolishes interaction with ANKHD1, ENTR1 and TRIM41; decreases interaction with RIPK2 and PPP1R12C; no effect on interaction with CHMP5, LDOC1 and PPP2R3B [UniProt] | Yes |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs104895453 CA150305 RCV000084124 VAR_012703 |
924 | G>D | Blau syndrome IBD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
RCV000705082 rs545734771 CA8051963 |
925 | D>G | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs1555501675 RCV000638052 CA395876314 |
963 | E>G | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA150314 RCV000084127 rs104895455 |
972 | V>I | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA8052023 RCV000638051 rs200463498 |
974 | S>F | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
CA150324 rs104895491 RCV000084131 |
1019 | R>* | Blau syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs1266310979 CA395864218 |
2 | G>E | No |
ClinGen gnomAD |
|
rs1210065116 CA395864216 |
2 | G>R | No |
ClinGen gnomAD |
|
CA395864243 rs1477471966 |
4 | E>D | No |
ClinGen gnomAD |
|
rs1263590939 CA395864242 |
4 | E>G | No |
ClinGen gnomAD |
|
rs140977130 CA395864249 |
5 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1421581723 CA395864250 |
5 | G>D | No |
ClinGen gnomAD |
|
CA8051162 rs140977130 |
5 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051164 rs373796134 |
8 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051163 rs764563350 |
8 | A>S | No |
ClinGen ExAC gnomAD |
|
rs376966894 CA8051165 |
9 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051167 rs746379299 |
11 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs754538287 CA8051168 |
11 | D>V | No |
ClinGen ExAC gnomAD |
|
rs1244953214 CA395864339 |
14 | E>K | No |
ClinGen gnomAD |
|
CA395864361 rs1264322073 |
16 | A>T | No |
ClinGen gnomAD |
|
rs1353867731 CA395864376 |
17 | S>I | No |
ClinGen TOPMed gnomAD |
|
rs1353867731 CA395864375 |
17 | S>N | No |
ClinGen TOPMed gnomAD |
|
CA395864381 rs1206486127 |
17 | S>R | No |
ClinGen TOPMed gnomAD |
|
CA10643713 rs886052043 |
18 | V>I | No |
ClinGen Ensembl |
|
rs1286500248 CA395864395 |
19 | L>F | No |
ClinGen gnomAD |
|
rs771671839 CA281248107 COSM1740299 |
21 | G>* | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA8051171 rs771671839 |
21 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs771671839 CA395864413 |
21 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1259603692 CA395864426 |
22 | H>R | No |
ClinGen gnomAD |
|
CA395864444 rs1596819304 |
24 | P>A | No |
ClinGen Ensembl |
|
CA8051172 rs149122717 |
24 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs567793250 CA395865146 |
25 | G>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs567793250 CA8051194 |
25 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1376485544 CA395865151 |
26 | C>R | No |
ClinGen gnomAD |
|
CA8051196 rs372321755 |
28 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051197 rs768775316 |
30 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395865215 rs768775316 |
30 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762072566 CA395865256 |
33 | A>D | No |
ClinGen ExAC gnomAD |
|
CA8051199 rs762072566 |
33 | A>G | No |
ClinGen ExAC gnomAD |
|
CA281249957 rs1042388030 |
34 | F>S | No |
ClinGen Ensembl |
|
CA395865309 rs1294855545 |
37 | Q>R | No |
ClinGen TOPMed gnomAD |
|
CA281249959 rs903928432 |
38 | R>G | No |
ClinGen TOPMed |
|
CA395865335 rs1567380395 |
39 | S>N | No |
ClinGen Ensembl |
|
rs750745611 CA8051200 |
40 | Q>P | No |
ClinGen ExAC gnomAD |
|
rs761191478 CA8051201 |
41 | L>M | No |
ClinGen ExAC gnomAD |
|
rs200089552 CA395865378 |
43 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs757914381 CA8051204 |
44 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs757914381 CA281250000 |
44 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051206 rs751223046 |
45 | L>P | No |
ClinGen ExAC gnomAD |
|
CA8051207 rs201586544 |
47 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs758548184 CA281250013 |
48 | G>A | No |
ClinGen TOPMed |
|
CA281250018 rs867685217 |
49 | S>F | No |
ClinGen Ensembl |
|
rs781166995 CA8051208 |
50 | L>P | No |
ClinGen ExAC gnomAD |
|
CA8051209 rs745597071 |
51 | E>* | No |
ClinGen ExAC gnomAD |
|
CA395865479 rs950712918 |
52 | G>A | No |
ClinGen TOPMed gnomAD |
|
rs1454349621 CA395865473 |
52 | G>S | No |
ClinGen gnomAD |
|
CA281250046 rs950712918 |
52 | G>V | No |
ClinGen TOPMed gnomAD |
|
CA8051211 rs780204985 |
54 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA281250069 rs780204985 |
54 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395865513 rs1240589863 |
55 | S>G | No |
ClinGen TOPMed |
|
CA8051212 rs749222396 |
55 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395865564 rs1435269085 |
59 | W>* | No |
ClinGen gnomAD |
|
rs761972851 CA8051215 |
61 | L>V | No |
ClinGen ExAC gnomAD |
|
CA8051219 rs146149433 |
67 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051218 rs760962549 |
67 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1338330097 CA395865685 |
68 | W>G | No |
ClinGen gnomAD |
|
rs1338330097 CA395865683 |
68 | W>R | No |
ClinGen gnomAD |
|
rs1292392033 CA395865726 |
70 | D>G | No |
ClinGen TOPMed |
|
CA395865739 rs1422256974 |
71 | Y>C | No |
ClinGen TOPMed |
|
CA8051222 rs138881230 |
72 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs760069458 CA8051221 |
72 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051223 rs751044848 |
73 | G>A | No |
ClinGen ExAC gnomAD |
|
rs1290064937 CA395865773 |
74 | F>L | No |
ClinGen gnomAD |
|
rs756886427 CA8051224 |
75 | H>P | No |
ClinGen ExAC gnomAD |
|
CA8051225 rs780921204 |
76 | L>F | No |
ClinGen ExAC gnomAD |
|
CA8051226 rs750092643 |
77 | L>P | No |
ClinGen ExAC gnomAD |
|
rs756028666 COSM71861 CA8051227 |
78 | G>A | ovary [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA8051228 rs779970018 |
79 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051230 rs370734707 |
80 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA395865850 rs1268714257 |
80 | P>R | No |
ClinGen TOPMed |
|
CA8051229 rs370734707 |
80 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA395865903 rs1373206847 |
85 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs748200640 CA8051232 |
86 | R>G | No |
ClinGen ExAC gnomAD |
|
rs772287143 CA8051233 |
86 | R>K | No |
ClinGen ExAC gnomAD |
|
rs983465914 CA281250160 |
87 | R>H | No |
ClinGen TOPMed gnomAD |
|
rs1286052486 CA395865950 |
89 | L>Q | No |
ClinGen TOPMed gnomAD |
|
CA395865957 rs1379914873 |
90 | D>N | No |
ClinGen gnomAD |
|
rs747221457 CA8051235 |
90 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1567380754 CA395865974 |
91 | T>A | No |
ClinGen Ensembl |
|
CA395865979 rs1356111500 |
91 | T>I | No |
ClinGen gnomAD |
|
CA8051238 rs187264529 |
92 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8051239 rs187264529 |
92 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8051240 rs773733975 |
93 | W>* | No |
ClinGen ExAC gnomAD |
|
rs767119064 CA8051242 |
96 | G>D | No |
ClinGen ExAC gnomAD |
|
CA8051243 rs767119064 |
96 | G>V | No |
ClinGen ExAC gnomAD |
|
rs1472138329 CA395866050 |
97 | T>A | No |
ClinGen gnomAD |
|
CA8051244 rs755795167 |
98 | W>R | No |
ClinGen ExAC gnomAD |
|
CA8051245 rs367756419 |
100 | C>F | No |
ClinGen ESP ExAC gnomAD |
|
CA8051246 rs753619374 |
101 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs138041175 CA8051247 |
101 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs987387515 CA281250215 |
102 | K>N | No |
ClinGen TOPMed |
|
rs1358340090 CA395866133 |
103 | L>V | No |
ClinGen gnomAD |
|
rs912789864 CA281250221 |
104 | I>T | No |
ClinGen TOPMed |
|
rs113706344 CA8051249 |
105 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1596826826 CA395866170 |
106 | A>V | No |
ClinGen Ensembl |
|
CA395866181 rs1379443086 |
107 | A>V | No |
ClinGen gnomAD |
|
rs35095295 CA8051253 |
110 | A>G | No |
ClinGen ExAC gnomAD |
|
CA395866216 rs571102620 |
110 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8051252 rs571102620 |
110 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs35095295 CA281250264 |
110 | A>V | No |
ClinGen ExAC gnomAD |
|
CA395866222 rs1280031955 |
111 | Q>* | No |
ClinGen gnomAD |
|
rs746189550 CA8051254 |
111 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA395866245 rs1201282463 |
112 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA8051257 rs767173948 |
113 | D>A | No |
ClinGen ExAC gnomAD |
|
rs767173948 CA395866255 |
113 | D>G | No |
ClinGen ExAC gnomAD |
|
rs104895468 CA395866252 |
113 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051259 rs760423983 |
117 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1032593984 CA281250282 |
118 | K>R | No |
ClinGen TOPMed gnomAD |
|
CA281250283 rs866887489 |
120 | H>N | No |
ClinGen Ensembl |
|
rs959869589 CA281250284 |
120 | H>R | No |
ClinGen TOPMed |
|
CA395866369 rs1174403599 |
122 | C>Y | No |
ClinGen gnomAD |
|
CA395866378 rs1596827216 |
123 | W>R | No |
ClinGen Ensembl |
|
CA8051262 rs149390911 |
125 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs781448444 CA8051264 |
126 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs781448444 CA395866419 |
126 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051265 rs758303366 |
126 | H>R | No |
ClinGen ExAC gnomAD |
|
rs781448444 CA395866421 |
126 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs146395646 CA8051266 |
127 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA395866475 rs200160605 |
130 | P>Q | No |
ClinGen 1000Genomes gnomAD |
|
CA281250322 rs200160605 |
130 | P>R | No |
ClinGen 1000Genomes gnomAD |
|
CA395866490 rs1567381069 |
131 | A>V | No |
ClinGen Ensembl |
|
rs757487598 CA281250326 |
132 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051268 rs757487598 |
132 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051269 rs781540619 |
132 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA395866507 rs1371541012 |
133 | D>G | No |
ClinGen TOPMed |
|
rs572556762 CA8051270 |
135 | Q>K | No |
ClinGen 1000Genomes ExAC |
|
rs770240116 CA8051271 |
135 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA150333 rs104895456 |
138 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs184502667 CA8051272 COSM1378203 |
138 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes TOPMed |
CA8051274 rs749841667 |
139 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs760196682 CA8051277 |
143 | R>G | No |
ClinGen ExAC gnomAD |
|
CA395866624 RCV000996262 rs1596827607 |
143 | R>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1466268203 CA395866652 |
145 | L>R | No |
ClinGen gnomAD |
|
CA395866658 rs1167393288 |
146 | H>Y | No |
ClinGen gnomAD |
|
CA8051279 rs776403451 |
147 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1345209935 CA395866723 |
150 | E>D | No |
ClinGen gnomAD |
|
CA395866717 rs1324643207 |
150 | E>V | No |
ClinGen gnomAD |
|
rs867184583 CA395866768 |
153 | L>P | No |
ClinGen TOPMed |
|
rs867184583 CA281250450 |
153 | L>R | No |
ClinGen TOPMed |
|
CA8051281 rs146054564 |
154 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA395866785 rs765122435 |
155 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051283 rs148753593 |
155 | L>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA395866796 rs1249085290 |
156 | A>P | No |
ClinGen gnomAD |
|
rs1567381239 CA395866802 |
156 | A>V | No |
ClinGen Ensembl |
|
rs562557464 CA8051284 |
159 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs751647609 CA8051285 |
160 | G>D | No |
ClinGen ExAC gnomAD |
|
CA8051286 rs757381363 |
161 | F>S | No |
ClinGen ExAC gnomAD |
|
CA8051289 rs756247553 |
162 | V>A | No |
ClinGen ExAC gnomAD |
|
CA8051288 rs139571975 |
162 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1421033155 CA395866892 |
163 | S>N | No |
ClinGen gnomAD |
|
rs1365186140 CA395866905 |
164 | Q>R | No |
ClinGen TOPMed gnomAD |
|
rs749605438 CA8051291 |
166 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749605438 CA395866928 |
166 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs769289791 CA8051293 |
167 | C>G | No |
ClinGen ExAC gnomAD |
|
rs769289791 CA8051292 |
167 | C>R | No |
ClinGen ExAC gnomAD |
|
CA395866970 rs1292846110 |
172 | L>F | No |
ClinGen TOPMed gnomAD |
|
CA8051295 rs770524298 |
173 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs748652020 COSM971291 CA8051294 |
173 | P>S | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs1356803976 CA395866998 |
177 | P>A | No |
ClinGen TOPMed gnomAD |
|
rs144368009 CA8051298 COSM3510082 |
177 | P>L | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
rs144368009 CA8051297 |
177 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1356803976 CA395866999 |
177 | P>S | No |
ClinGen TOPMed gnomAD |
|
CA395867006 rs1487939558 |
178 | S>F | No |
ClinGen TOPMed gnomAD |
|
rs1259750235 CA395867017 |
180 | R>K | No |
ClinGen gnomAD |
|
CA8051316 rs141414002 |
181 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs748912559 CA8051317 |
182 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395867056 rs1400044115 |
184 | L>P | No |
ClinGen TOPMed |
|
CA395867060 rs1180675068 |
185 | L>F | No |
ClinGen gnomAD |
|
CA395867069 rs1239172723 |
186 | D>G | No |
ClinGen gnomAD |
|
CA281257177 rs1023677987 |
187 | L>F | No |
ClinGen Ensembl |
|
rs867121621 CA281257188 |
188 | A>V | No |
ClinGen Ensembl |
|
rs61755182 VAR_012667 CA8051320 |
189 | T>M | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1369602268 CA395867091 |
190 | V>A | No |
ClinGen TOPMed |
|
CA8051323 rs149071116 |
192 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1002937514 CA281257232 |
196 | A>P | No |
ClinGen TOPMed gnomAD |
|
rs373838219 CA8051326 |
197 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051325 rs373838219 |
197 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA395867141 rs1303100796 |
198 | F>C | No |
ClinGen gnomAD |
|
CA8051329 rs758959985 |
200 | L>P | No |
ClinGen ExAC gnomAD |
|
rs369764782 CA281257272 |
203 | V>I | No |
ClinGen Ensembl |
|
CA395867200 rs1175887979 |
207 | P>A | No |
ClinGen TOPMed gnomAD |
|
CA395867203 rs1596852030 RCV000996263 |
207 | P>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA395867209 rs1434276044 |
208 | V>G | No |
ClinGen TOPMed gnomAD |
|
CA395867205 rs1309284100 |
208 | V>L | No |
ClinGen TOPMed |
|
rs753744335 CA8051337 |
209 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395867219 rs1170751141 |
210 | L>F | No |
ClinGen TOPMed gnomAD |
|
CA395867220 rs1170751141 |
210 | L>F | No |
ClinGen TOPMed gnomAD |
|
rs771887760 RCV000585126 CA395867222 |
211 | A>S | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs771887760 CA8051338 |
211 | A>T | No |
ClinGen ExAC gnomAD |
|
CA395867272 rs1470423190 |
217 | A>G | No |
ClinGen gnomAD |
|
rs1375771211 CA395867270 |
217 | A>T | No |
ClinGen gnomAD |
|
rs1157758358 CA395867275 |
218 | T>A | No |
ClinGen gnomAD |
|
CA395867303 rs1416058507 |
221 | K>N | No |
ClinGen gnomAD |
|
CA8051371 rs375336137 |
224 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs529640892 CA8051374 |
229 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8051376 rs781333877 |
233 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs781333877 CA395867376 |
233 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs201790577 CA8051379 COSM971293 |
235 | R>H | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
rs201790577 CA8051378 |
235 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1263235006 CA395867400 |
237 | L>F | No |
ClinGen gnomAD |
|
CA281261395 rs1001861018 |
238 | S>G | No |
ClinGen TOPMed gnomAD |
|
rs202190367 CA8051381 |
240 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762225932 CA8051382 |
242 | G>E | No |
ClinGen ExAC gnomAD |
|
rs148516118 CA8051383 |
245 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1230912892 CA395867457 |
246 | L>V | No |
ClinGen gnomAD |
|
CA8051387 rs752210177 |
247 | C>F | No |
ClinGen ExAC gnomAD |
|
CA8051386 rs764675751 |
247 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051389 rs117836686 |
249 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8051388 rs763743511 |
249 | E>K | No |
ClinGen ExAC gnomAD |
|
CA395867475 rs117836686 |
249 | E>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8051390 rs757182049 |
251 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA281261445 rs758462936 |
251 | I>V | No |
ClinGen gnomAD |
|
CA395867492 rs1328632402 |
252 | Y>H | No |
ClinGen gnomAD |
|
CA281261464 rs946242202 |
253 | T>A | No |
ClinGen Ensembl |
|
CA395867524 rs1380352075 |
256 | V>A | No |
ClinGen Ensembl |
|
rs1284557712 CA395867528 |
257 | L>R | No |
ClinGen gnomAD |
|
CA395867539 rs1423630763 |
259 | V>I | No |
ClinGen Ensembl |
|
CA281261485 rs528290590 |
260 | W>C | No |
ClinGen Ensembl |
|
rs756042160 CA8051394 |
263 | V>M | No |
ClinGen ExAC gnomAD |
|
CA395867576 rs1411160364 |
264 | G>D | No |
ClinGen TOPMed |
|
rs780005934 CA8051396 |
267 | G>R | No |
ClinGen ExAC gnomAD |
|
VAR_012670 rs2066842 CA8051397 |
268 | P>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs2066842 CA8051398 |
268 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8051399 rs774703072 |
269 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1268158074 CA395867607 |
270 | Q>K | No |
ClinGen gnomAD |
|
CA395867610 rs1271063107 |
270 | Q>P | No |
ClinGen TOPMed |
|
CA395867621 rs773516123 |
271 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1374819768 CA395867635 |
273 | P>L | No |
ClinGen TOPMed gnomAD |
|
CA8051404 rs766841285 |
275 | T>A | No |
ClinGen ExAC |
|
CA8051406 rs762579270 |
276 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1437917228 COSM558075 CA395867657 |
277 | G>V | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs200744970 CA8051408 |
279 | E>A | No |
ClinGen 1000Genomes ExAC |
|
CA281261558 rs146074127 |
280 | E>G | No |
ClinGen ESP |
|
CA8051409 rs756943416 |
281 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051411 rs369740939 |
284 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA395867701 rs1403583731 |
284 | T>I | No |
ClinGen gnomAD |
|
rs1319731165 CA395867704 |
285 | P>A | No |
ClinGen TOPMed gnomAD |
|
rs560242309 CA8051412 |
287 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
VAR_012671 CA8051413 rs5743271 |
289 | N>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs755127265 CA8051415 |
291 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs149338478 CA395867753 |
292 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
COSM1189274 CA8051417 rs149338478 |
292 | A>V | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
rs778114969 CA8051418 |
295 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051420 rs771184127 |
299 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395867789 rs1371595174 |
299 | G>S | No |
ClinGen gnomAD |
|
rs1164632643 CA395867796 |
300 | E>* | No |
ClinGen gnomAD |
|
rs1384936174 CA395867804 |
301 | A>S | No |
ClinGen gnomAD |
|
rs1384936174 CA395867802 |
301 | A>T | No |
ClinGen gnomAD |
|
CA395867839 rs1381205352 |
306 | S>N | No |
ClinGen gnomAD |
|
rs1567390329 CA395867835 |
306 | S>R | No |
ClinGen Ensembl |
|
CA8051423 rs191901394 |
307 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1242909771 CA395867844 |
307 | T>S | No |
ClinGen gnomAD |
|
rs1267341301 COSM971296 CA395867851 |
308 | L>F | endometrium [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs767225117 CA8051425 |
309 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051427 rs760588667 |
310 | Q>* | No |
ClinGen ExAC gnomAD |
|
rs148526508 CA8051428 |
310 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs778995814 CA8051430 |
311 | R>Q | No |
ClinGen ExAC TOPMed |
|
rs1462834850 CA395867875 |
313 | H>N | No |
ClinGen gnomAD |
|
CA395867896 rs1306211364 |
316 | W>* | No |
ClinGen TOPMed gnomAD |
|
rs1306211364 CA395867897 |
316 | W>S | No |
ClinGen TOPMed gnomAD |
|
CA395867902 rs1320374265 |
317 | A>T | No |
ClinGen TOPMed |
|
rs199975570 CA8051431 |
317 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1455956071 CA395867912 |
318 | A>V | No |
ClinGen TOPMed |
|
CA395867915 rs1161700878 |
319 | G>E | No |
ClinGen gnomAD |
|
CA8051432 rs758631940 |
319 | G>W | No |
ClinGen ExAC gnomAD |
|
CA8051435 rs201591164 |
320 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8051436 rs747190206 |
321 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051437 rs771364403 |
321 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1453630477 CA395867926 |
321 | D>Y | No |
ClinGen TOPMed gnomAD |
|
CA395867965 COSM257540 rs1596862481 |
326 | L>I | large_intestine endometrium [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA395867977 rs1219198542 |
328 | V>I | No |
ClinGen gnomAD |
|
rs773132030 CA8051438 RCV001002523 |
330 | P>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA395868003 rs1392970712 |
331 | F>L | No |
ClinGen gnomAD |
|
CA395868015 rs1307391583 |
333 | C>Y | No |
ClinGen TOPMed gnomAD |
|
rs104895461 CA395868021 |
334 | R>P | No |
ClinGen TOPMed |
|
rs7498256 CA281261862 |
335 | Q>H | No |
ClinGen gnomAD |
|
rs774016655 CA8051441 |
340 | A>G | No |
ClinGen ExAC gnomAD |
|
rs770361381 CA8051440 |
340 | A>T | No |
ClinGen ExAC gnomAD |
|
rs369732140 CA8051443 |
343 | L>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs199475912 CA230137 RCV000089376 |
344 | S>F | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA8051446 rs766219817 |
345 | V>A | No |
ClinGen ExAC gnomAD |
|
rs760224068 CA8051445 |
345 | V>L | No |
ClinGen ExAC gnomAD |
|
CA8051449 rs759520552 |
346 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs753537879 CA8051447 |
346 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1419019873 CA395868096 |
347 | T>S | No |
ClinGen gnomAD |
|
CA8051450 rs752615209 |
349 | L>V | No |
ClinGen ExAC gnomAD |
|
CA281261998 rs554991667 |
351 | E>D | No |
ClinGen TOPMed |
|
rs751854684 CA8051453 |
354 | C>F | No |
ClinGen ExAC gnomAD |
|
CA395868151 rs104895488 |
355 | W>C | No |
ClinGen TOPMed gnomAD |
|
rs201107567 CA8051455 |
356 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8051454 rs757368076 |
356 | P>S | No |
ClinGen ExAC gnomAD |
|
CA8051456 rs756538468 |
357 | D>E | No |
ClinGen ExAC gnomAD |
|
CA281262062 rs967725330 |
358 | V>I | No |
ClinGen Ensembl |
|
CA395868174 rs1346043018 |
360 | Q>E | No |
ClinGen gnomAD |
|
rs556617095 CA8051458 |
361 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1310692375 CA395868191 |
362 | D>A | No |
ClinGen gnomAD |
|
rs772548332 CA8051460 |
363 | I>N | No |
ClinGen ExAC gnomAD |
|
rs746706579 CA8051461 |
365 | Q>* | No |
ClinGen ExAC gnomAD |
|
rs1430448639 CA395868212 |
365 | Q>L | No |
ClinGen TOPMed |
|
rs776498009 CA8051463 |
368 | L>F | No |
ClinGen ExAC |
|
rs759382357 CA8051464 |
369 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs199858111 CA8051465 |
370 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs775443143 CA8051466 |
371 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395868253 rs1256517634 |
372 | D>N | No |
ClinGen TOPMed |
|
CA281262140 rs764176270 COSM971298 |
373 | R>H | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA8051467 rs764176270 |
373 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs751550117 COSM190541 CA8051468 |
374 | V>A | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs1477656665 CA395868273 |
375 | L>R | No |
ClinGen TOPMed gnomAD |
|
CA8051470 rs767694243 |
376 | L>F | No |
ClinGen ExAC gnomAD |
|
CA395868284 rs1567391045 |
377 | T>S | No |
ClinGen Ensembl |
|
rs1393333504 CA395868289 |
378 | F>S | No |
ClinGen TOPMed |
|
rs780544950 CA8051473 |
378 | F>V | No |
ClinGen ExAC gnomAD |
|
rs1272071952 CA395868297 |
379 | D>G | No |
ClinGen TOPMed |
|
CA8051475 rs104895477 |
383 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1056234534 CA281262183 |
388 | F>L | No |
ClinGen gnomAD |
|
CA8051478 rs528926956 |
389 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs147283871 CA8051480 |
390 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs769622495 CA8051481 |
390 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051482 rs554887705 |
391 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8051483 rs763868196 |
392 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs140716236 CA8051484 |
393 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1423938351 CA395868399 |
395 | C>S | No |
ClinGen gnomAD |
|
rs150078153 CA8051488 |
397 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051491 COSM190542 rs755554858 |
399 | D>N | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs779346494 CA395868433 |
400 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051492 rs779346494 |
400 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051493 rs753241960 |
402 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051494 rs756755875 |
404 | Q>* | No |
ClinGen ExAC gnomAD |
|
CA281262296 rs367630707 |
404 | Q>H | No |
ClinGen ESP TOPMed gnomAD |
|
CA281262317 rs760998620 |
407 | L>F | No |
ClinGen Ensembl |
|
rs1215923082 CA395868488 |
409 | N>I | No |
ClinGen gnomAD |
|
rs1215923082 CA395868487 |
409 | N>S | No |
ClinGen gnomAD |
|
rs1463282482 CA395868513 |
413 | G>D | No |
ClinGen gnomAD |
|
CA281262321 rs937713503 |
414 | N>K | No |
ClinGen TOPMed gnomAD |
|
CA395868520 rs104895429 |
414 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs745540141 CA8051495 |
415 | L>V | No |
ClinGen ExAC gnomAD |
|
CA281262334 rs766612118 |
416 | L>V | No |
ClinGen Ensembl |
|
CA395868540 rs1219204741 |
418 | N>D | No |
ClinGen gnomAD |
|
rs867562380 CA281262344 |
419 | A>V | No |
ClinGen gnomAD |
|
RCV000658285 CA8051496 rs367883043 |
420 | R>C | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs199475913 CA230140 COSM1378205 RCV000089377 |
420 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
rs768497619 CA8051498 |
422 | V>G | No |
ClinGen ExAC gnomAD |
|
rs1243809567 CA395868564 |
422 | V>L | No |
ClinGen gnomAD |
|
CA8051499 rs774197781 |
423 | V>M | No |
ClinGen ExAC gnomAD |
|
rs1596864349 CA395868576 |
424 | T>N | No |
ClinGen Ensembl |
|
rs545466982 CA8051501 |
426 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
COSM3937082 rs144827713 CA8051507 |
429 | A>T | oesophagus [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
rs768389547 CA8051513 |
435 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs778723375 CA8051514 |
436 | K>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs375201229 CA8051518 |
439 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051519 rs143110172 COSM1378206 |
439 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
CA281262534 rs143110172 |
439 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs375201229 CA395868664 |
439 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA395868671 rs1443384717 |
440 | T>I | No |
ClinGen gnomAD |
|
CA395868684 rs1283324859 |
442 | F>S | No |
ClinGen gnomAD |
|
CA395868703 rs1364334198 |
445 | K>E | No |
ClinGen TOPMed |
|
rs763372171 CA8051523 |
447 | F>L | No |
ClinGen ExAC gnomAD |
|
CA395868739 rs1438239722 |
450 | Q>* | No |
ClinGen gnomAD |
|
CA8051526 rs764525298 |
450 | Q>L | No |
ClinGen ExAC gnomAD |
|
rs1249578378 CA395868749 |
451 | G>D | No |
ClinGen gnomAD |
|
rs556728426 CA8051528 |
453 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA395868772 rs1596865138 |
455 | Y>S | No |
ClinGen Ensembl |
|
rs765857594 CA8051529 |
459 | R>C | No |
ClinGen ExAC gnomAD |
|
CA8051530 rs753458507 |
459 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395868816 rs1410931849 |
461 | H>Q | No |
ClinGen gnomAD |
|
rs104895492 CA8051535 |
464 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1248238724 CA395868840 |
466 | A>T | No |
ClinGen TOPMed |
|
CA8051537 rs776802746 |
466 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051539 rs769988393 |
468 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051540 rs775728252 |
468 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA281262650 rs775728252 |
468 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395868857 rs1202641657 |
469 | L>R | No |
ClinGen TOPMed |
|
rs1078327 CA8051541 VAR_036872 |
471 | R>C | does not affect activity [UniProt] | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA8051542 rs764414933 |
471 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395868882 rs1434117118 |
474 | Q>K | No |
ClinGen TOPMed |
|
CA8051545 rs367819045 |
474 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA281262706 rs925816831 |
476 | T>P | No |
ClinGen Ensembl |
|
rs1244100618 CA395868906 |
477 | S>* | No |
ClinGen TOPMed gnomAD |
|
rs950076475 CA281262728 |
481 | G>S | No |
ClinGen gnomAD |
|
CA8051548 rs764999813 |
483 | C>G | No |
ClinGen ExAC |
|
rs752289154 CA8051549 |
483 | C>S | No |
ClinGen ExAC gnomAD |
|
CA8051550 rs201712814 |
484 | H>P | No |
ClinGen ExAC gnomAD |
|
CA8051552 rs746965323 |
486 | P>S | No |
ClinGen ExAC gnomAD |
|
CA281262812 rs908626604 |
487 | V>I | No |
ClinGen TOPMed gnomAD |
|
rs1596865865 CA395869002 |
492 | V>G | No |
ClinGen Ensembl |
|
rs941488890 CA281262835 |
494 | K>Q | No |
ClinGen Ensembl |
|
rs1246426231 CA395869057 |
500 | L>F | No |
ClinGen gnomAD |
|
rs1596865967 CA395869066 |
502 | Q>P | No |
ClinGen Ensembl |
|
rs1567392321 CA395869074 |
503 | E>A | No |
ClinGen Ensembl |
|
CA395869081 rs775823953 |
504 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395869080 rs769745923 |
504 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395869079 rs769745923 |
504 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs775823953 CA8051558 |
504 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051557 rs769745923 |
504 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395869086 rs1447813363 |
505 | G>A | No |
ClinGen gnomAD |
|
CA395869087 rs1447813363 |
505 | G>E | No |
ClinGen gnomAD |
|
rs749451506 CA8051559 |
505 | G>W | No |
ClinGen ExAC gnomAD |
|
rs1596866175 CA395869090 |
506 | S>A | No |
ClinGen Ensembl |
|
rs762313725 CA8051562 |
508 | K>E | No |
ClinGen ExAC gnomAD |
|
rs773580517 CA281262878 |
509 | T>I | No |
ClinGen ExAC gnomAD |
|
rs773580517 CA8051564 |
509 | T>N | No |
ClinGen ExAC gnomAD |
|
CA8051565 rs759153904 |
511 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1159805501 CA395869126 |
512 | D>G | No |
ClinGen gnomAD |
|
CA8051567 rs540122692 |
514 | Y>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8051566 rs540122692 |
514 | Y>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8051570 COSM703532 rs368316739 |
519 | Q>P | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC gnomAD |
rs368316739 CA8051569 |
519 | Q>R | No |
ClinGen ESP ExAC gnomAD |
|
rs757269951 CA8051571 |
520 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051573 rs750320692 |
523 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA281262959 rs750320692 |
523 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA281262970 rs756269477 |
524 | H>P | No |
ClinGen ExAC gnomAD |
|
CA8051574 rs756269477 |
524 | H>R | No |
ClinGen ExAC gnomAD |
|
rs1020669798 CA281262991 |
526 | T>A | No |
ClinGen TOPMed |
|
CA395869215 rs1208159760 |
527 | P>H | No |
ClinGen gnomAD |
|
rs779264256 CA8051581 |
528 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051584 rs773811702 |
528 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773811702 CA8051582 |
528 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773811702 CA8051583 |
528 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051580 rs779264256 COSM3957630 |
528 | P>S | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA8051579 rs779264256 |
528 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395869231 rs1422583443 |
530 | S>L | No |
ClinGen gnomAD |
|
rs1355322844 CA395869227 |
530 | S>P | No |
ClinGen TOPMed |
|
rs1328584012 CA395869234 |
531 | A>T | No |
ClinGen Ensembl |
|
CA8051586 rs762694876 |
531 | A>V | No |
ClinGen ExAC gnomAD |
|
CA8051587 rs147417132 |
533 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051588 rs139663808 |
534 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs991697483 CA281263151 |
536 | G>* | No |
ClinGen Ensembl |
|
rs1469956690 CA395869262 |
536 | G>E | No |
ClinGen gnomAD |
|
rs767197520 CA8051590 |
537 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051594 rs753857915 |
541 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051595 rs753857915 |
541 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051593 rs576658764 |
541 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs779174604 CA8051596 |
542 | G>D | No |
ClinGen ExAC gnomAD |
|
CA395869292 rs1227896647 |
542 | G>S | No |
ClinGen gnomAD |
|
CA8051597 rs545580252 COSM703531 |
543 | R>C | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
CA8051598 rs772534917 |
543 | R>L | No |
ClinGen ExAC gnomAD |
|
CA395869299 rs772534917 |
543 | R>P | No |
ClinGen ExAC gnomAD |
|
CA8051599 rs777949388 |
545 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395869309 rs1255620928 |
545 | P>S | No |
ClinGen gnomAD |
|
CA8051601 rs771275838 |
547 | L>F | No |
ClinGen ExAC gnomAD |
|
rs762186831 CA395869320 |
547 | L>H | No |
ClinGen gnomAD |
|
CA281263214 rs762186831 |
547 | L>P | No |
ClinGen gnomAD |
|
CA8051603 rs374916056 |
552 | R>G | No |
ClinGen ESP ExAC gnomAD |
|
rs768274192 CA8051604 |
554 | A>S | No |
ClinGen ExAC gnomAD |
|
rs1298492053 CA395869359 |
554 | A>V | No |
ClinGen gnomAD |
|
rs1306260121 CA395869378 |
557 | G>D | No |
ClinGen gnomAD |
|
CA8051605 rs369310865 |
559 | G>S | No |
ClinGen ESP ExAC gnomAD |
|
rs761511477 CA8051606 |
560 | M>V | No |
ClinGen ExAC gnomAD |
|
CA8051607 rs767379148 |
561 | C>Y | No |
ClinGen ExAC |
|
rs760678831 CA8051609 |
564 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051610 rs766284613 |
565 | F>L | No |
ClinGen ExAC gnomAD |
|
CA281263277 rs908511039 |
566 | S>L | No |
ClinGen Ensembl |
|
rs1275740212 CA395869444 |
567 | A>V | No |
ClinGen gnomAD |
|
CA8051612 rs755091130 |
570 | L>F | No |
ClinGen ExAC gnomAD |
|
CA8051613 rs765280724 |
573 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs752936259 CA8051614 |
573 | A>V | No |
ClinGen ExAC gnomAD |
|
rs1264862631 CA395869486 |
574 | Q>* | No |
ClinGen gnomAD |
|
CA395869505 rs1210346907 |
576 | S>R | No |
ClinGen TOPMed |
|
rs758507559 CA8051615 |
577 | P>T | No |
ClinGen ExAC gnomAD |
|
rs1427575528 CA395869516 |
578 | D>E | No |
ClinGen gnomAD |
|
rs778204006 CA8051616 |
578 | D>G | No |
ClinGen ExAC gnomAD |
|
CA8051617 rs747275567 |
580 | I>T | No |
ClinGen ExAC gnomAD |
|
CA281263310 rs866417928 |
581 | S>F | No |
ClinGen Ensembl |
|
CA281263312 rs750625667 |
582 | L>V | No |
ClinGen Ensembl |
|
CA395869558 rs1331144569 |
585 | L>Q | No |
ClinGen gnomAD |
|
rs1226636811 CA395869587 |
590 | G>C | No |
ClinGen gnomAD |
|
rs777290697 CA281263318 |
590 | G>V | No |
ClinGen Ensembl |
|
rs768306879 CA8051621 |
591 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051623 rs148683734 |
592 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1324354422 CA395869604 |
593 | P>S | No |
ClinGen TOPMed |
|
CA8051625 rs142077546 |
596 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051626 rs377554134 |
597 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA281263381 rs759418926 |
598 | P>S | No |
ClinGen ExAC gnomAD |
|
rs759418926 COSM558071 CA8051628 |
598 | P>T | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA395869704 rs1404647585 |
601 | F>L | No |
ClinGen gnomAD |
|
CA281263387 rs572217630 |
604 | I>V | No |
ClinGen TOPMed |
|
rs765330092 CA8051629 |
606 | F>S | No |
ClinGen ExAC gnomAD |
|
CA8051630 rs752707000 |
607 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs777798807 CA8051631 |
609 | F>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395869774 rs1321541342 |
609 | F>L | No |
ClinGen gnomAD |
|
CA8051632 rs764277453 |
610 | F>V | No |
ClinGen ExAC gnomAD |
|
CA395869837 rs1318260118 |
614 | Y>C | No |
ClinGen TOPMed gnomAD |
|
rs971975181 CA281263407 |
614 | Y>H | No |
ClinGen TOPMed |
|
rs771607438 CA395869858 |
616 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs747674172 CA8051637 |
616 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051638 rs771607438 |
616 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051639 rs772781164 |
617 | L>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA10647601 rs867131858 |
619 | A>V | No |
ClinGen Ensembl |
|
rs1567393465 CA395869960 |
624 | A>T | No |
ClinGen Ensembl |
|
rs746653187 CA8051640 |
628 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395870012 rs1334577515 |
628 | H>Y | No |
ClinGen Ensembl |
|
rs1180117238 CA395870152 |
632 | C>Y | No |
ClinGen TOPMed gnomAD |
|
CA281263416 rs970949991 |
634 | R>G | No |
ClinGen TOPMed gnomAD |
|
rs1176944571 CA395870169 |
634 | R>S | No |
ClinGen TOPMed |
|
rs1004387511 CA395870171 |
635 | P>A | No |
ClinGen gnomAD |
|
rs1004387511 CA281263425 |
635 | P>S | No |
ClinGen gnomAD |
|
CA8051645 rs199770660 |
641 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA281263448 rs1015817254 |
641 | A>V | No |
ClinGen TOPMed |
|
rs775480458 CA8051646 |
643 | L>F | No |
ClinGen ExAC gnomAD |
|
CA8051647 rs763005931 |
643 | L>H | No |
ClinGen ExAC gnomAD |
|
CA395870223 rs763005931 |
643 | L>P | No |
ClinGen ExAC gnomAD |
|
CA281263485 rs550393501 |
645 | P>R | No |
ClinGen 1000Genomes |
|
CA8051649 rs370615110 |
646 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA395870250 rs1278886589 |
647 | M>I | No |
ClinGen gnomAD |
|
CA8051651 rs768002172 |
647 | M>L | No |
ClinGen ExAC gnomAD |
|
rs78848722 CA8051652 |
648 | C>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1484221771 CA395870267 |
649 | I>F | No |
ClinGen TOPMed |
|
rs1484221771 CA395870265 |
649 | I>L | No |
ClinGen TOPMed |
|
CA395870269 rs367637762 |
649 | I>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs367637762 CA8051653 |
649 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051654 rs780773726 |
652 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs757895989 CA8051656 |
653 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs757895989 CA281263504 |
653 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs777290315 CA8051657 |
654 | G>R | No |
ClinGen ExAC gnomAD |
|
CA8051660 rs570167996 |
659 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs111400183 CA8051661 |
660 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs369957746 CA8051663 |
661 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1329100109 CA395870418 |
661 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA395870433 rs1410917662 |
662 | L>F | No |
ClinGen gnomAD |
|
rs1310112406 CA395870473 |
665 | K>T | No |
ClinGen Ensembl |
|
rs774425599 CA8051666 |
667 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051667 rs762143113 |
668 | P>A | No |
ClinGen ExAC gnomAD |
|
rs5743275 CA8051668 |
668 | P>L | No |
ClinGen ESP TOPMed gnomAD |
|
rs1217298974 CA395870525 |
669 | H>Y | No |
ClinGen gnomAD |
|
rs754325924 CA8051673 |
671 | L>R | No |
ClinGen ExAC gnomAD |
|
rs1414478945 CA395870573 |
672 | Q>H | No |
ClinGen TOPMed |
|
rs755473279 CA8051674 |
673 | I>M | No |
ClinGen ExAC gnomAD |
|
rs945203022 CA281263677 |
674 | T>I | No |
ClinGen TOPMed |
|
rs138958152 CA8051675 |
675 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs374116563 CA8051676 |
677 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1477792915 CA395870639 |
678 | L>P | No |
ClinGen gnomAD |
|
CA8051681 rs149002807 |
682 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1406646236 CA395870693 |
683 | S>Y | No |
ClinGen gnomAD |
|
rs5743276 CA8051683 |
684 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs114664276 CA8051684 |
684 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs201709367 CA8051685 |
686 | H>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8051686 rs772247744 |
687 | W>* | No |
ClinGen ExAC gnomAD |
|
CA395870752 rs1227364743 |
688 | G>R | No |
ClinGen gnomAD |
|
CA395870789 rs1361453921 |
691 | A>D | No |
ClinGen gnomAD |
|
CA8051689 rs766687492 |
692 | E>G | No |
ClinGen ExAC gnomAD |
|
CA8051688 rs143782684 COSM1302013 |
692 | E>K | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ESP ExAC gnomAD |
CA281263822 rs1012189224 |
699 | A>P | No |
ClinGen TOPMed gnomAD |
|
CA8051691 rs759970720 |
701 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs139104022 CA8051692 |
702 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs750096604 CA8051694 |
703 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395870935 rs750096604 |
703 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051696 rs779728017 |
704 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs749166558 CA8051697 |
705 | A>S | No |
ClinGen ExAC gnomAD |
|
rs754726436 CA8051698 |
705 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs539297110 CA8051699 |
706 | C>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs539297110 CA8051700 |
706 | C>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs772304813 CA8051701 |
707 | A>G | No |
ClinGen ExAC gnomAD |
|
CA8051703 rs747241427 |
708 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs35285618 CA8051704 |
708 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA395871003 rs1283525653 |
709 | W>* | No |
ClinGen gnomAD |
|
rs776701942 CA395871012 |
709 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs776025574 CA8051706 |
716 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051707 rs200035357 |
716 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1444481596 CA395871106 |
717 | K>N | No |
ClinGen gnomAD |
|
CA8051709 rs749879341 |
720 | H>Y | No |
ClinGen ExAC gnomAD |
|
rs201076024 CA8051712 |
723 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs866850012 CA281263968 |
723 | P>S | No |
ClinGen Ensembl |
|
CA395871218 rs1333485422 |
726 | A>V | No |
ClinGen gnomAD |
|
CA395871221 rs1338599093 |
727 | P>A | No |
ClinGen gnomAD |
|
rs1330101550 CA395871240 |
728 | G>V | No |
ClinGen gnomAD |
|
rs375016055 CA8051717 |
730 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051718 rs369766227 |
732 | S>N | No |
ClinGen ESP ExAC gnomAD |
|
rs6413461 CA281264025 |
732 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770215737 CA8051721 |
734 | H>P | No |
ClinGen ExAC gnomAD |
|
rs139097081 CA8051722 |
735 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
CA395871349 rs1251822561 |
736 | M>I | No |
ClinGen gnomAD |
|
CA8051723 rs763452657 |
737 | P>L | No |
ClinGen ExAC gnomAD |
|
CA395871360 rs1378981093 |
738 | G>R | No |
ClinGen gnomAD |
|
CA395871379 rs1171744223 |
739 | F>S | No |
ClinGen TOPMed gnomAD |
|
CA395871381 rs1171744223 |
739 | F>Y | No |
ClinGen TOPMed gnomAD |
|
CA8051726 rs766637609 |
740 | I>F | No |
ClinGen ExAC gnomAD |
|
CA8051727 rs766637609 |
740 | I>L | No |
ClinGen ExAC gnomAD |
|
CA8051728 rs374106394 |
740 | I>T | No |
ClinGen ESP ExAC gnomAD |
|
CA281264092 rs766637609 |
740 | I>V | No |
ClinGen ExAC gnomAD |
|
CA8051729 rs759074613 |
741 | W>* | No |
ClinGen ExAC gnomAD |
|
rs1358771284 CA395871412 |
741 | W>C | No |
ClinGen Ensembl |
|
CA395871407 rs759074613 |
741 | W>L | No |
ClinGen ExAC gnomAD |
|
rs146458676 CA281264153 |
743 | I>M | No |
ClinGen ESP TOPMed |
|
CA395871432 rs1305177895 |
743 | I>V | No |
ClinGen gnomAD |
|
rs751849531 CA8051733 |
744 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA8051732 rs140876663 |
744 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1255713041 CA395871457 |
745 | S>I | No |
ClinGen gnomAD |
|
rs1346346993 CA395871459 |
745 | S>R | No |
ClinGen TOPMed gnomAD |
|
CA395871469 rs1208002758 |
746 | L>P | No |
ClinGen gnomAD |
|
CA281264176 rs781083084 |
748 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs757403209 CA8051735 |
748 | E>K | No |
ClinGen ExAC gnomAD |
|
rs571979342 CA8051738 |
749 | M>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs746132151 CA8051737 |
749 | M>V | No |
ClinGen ExAC gnomAD |
|
CA8051739 rs780243828 |
750 | Q>E | No |
ClinGen ExAC gnomAD |
|
rs749720540 CA395871568 |
753 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051742 rs774888496 |
753 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051741 rs749720540 |
753 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395871598 rs375713299 |
756 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA395871607 rs1596870949 |
757 | K>R | No |
ClinGen Ensembl |
|
rs752390709 CA8051746 |
759 | A>T | No |
ClinGen ExAC gnomAD |
|
rs1232451010 CA395871667 |
763 | N>H | No |
ClinGen TOPMed |
|
CA8051749 rs564815866 |
763 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA281264310 rs533618528 |
764 | V>I | No |
ClinGen 1000Genomes |
|
rs1276023609 CA395871699 |
765 | G>R | No |
ClinGen gnomAD |
|
CA8051752 rs750410680 |
767 | L>F | No |
ClinGen ExAC gnomAD |
|
rs1298126346 CA395871740 |
768 | K>R | No |
ClinGen TOPMed |
|
rs753779656 CA281264342 |
773 | S>N | No |
ClinGen TOPMed gnomAD |
|
CA395871842 rs1264795843 |
776 | P>S | No |
ClinGen gnomAD |
|
rs1264795843 CA395871838 |
776 | P>T | No |
ClinGen gnomAD |
|
CA8051753 rs756184386 |
777 | T>N | No |
ClinGen ExAC gnomAD |
|
CA8051754 rs749491290 |
779 | C>Y | No |
ClinGen ExAC gnomAD |
|
CA395871891 rs1168427998 |
780 | A>T | No |
ClinGen gnomAD |
|
CA281264410 rs866173388 |
781 | A>V | No |
ClinGen Ensembl |
|
rs1019685184 CA281264422 |
783 | A>D | No |
ClinGen gnomAD |
|
rs1019685184 CA395871928 |
783 | A>V | No |
ClinGen gnomAD |
|
CA395871947 rs1437768475 |
785 | V>M | No |
ClinGen gnomAD |
|
CA8051756 rs374321834 |
786 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8051757 rs748697332 |
788 | H>Q | No |
ClinGen ExAC gnomAD |
|
rs912833785 CA281264451 |
788 | H>R | No |
ClinGen TOPMed gnomAD |
|
CA8051759 rs773758818 |
789 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
VAR_024402 CA8051762 rs5743279 |
790 | R>Q | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA150262 rs104895464 |
791 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs104895484 VAR_073246 CA150259 |
791 | R>W | No |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs1200152449 CA395872028 |
793 | V>A | No |
ClinGen gnomAD |
|
rs104895444 CA395872024 |
793 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA281264511 rs1053910388 |
794 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA8051765 rs750344762 |
796 | Q>* | No |
ClinGen ExAC gnomAD |
|
rs1458967886 CA395872059 |
796 | Q>P | No |
ClinGen gnomAD |
|
rs1275566947 CA395872117 |
799 | Y>C | No |
ClinGen TOPMed |
|
CA281264529 rs907626784 |
803 | G>C | No |
ClinGen Ensembl |
|
CA395872179 rs1179136561 |
804 | D>N | No |
ClinGen gnomAD |
|
CA8051767 rs754094105 |
805 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1330776980 CA395872234 |
808 | E>Q | No |
ClinGen TOPMed gnomAD |
|
rs1290958571 CA395872259 |
809 | Q>H | No |
ClinGen TOPMed |
|
CA281264558 rs61736931 |
809 | Q>R | No |
ClinGen Ensembl |
|
CA281264561 rs746692864 |
812 | P>S | No |
ClinGen TOPMed gnomAD |
|
CA8051770 rs758782544 |
817 | C>Y | No |
ClinGen ExAC gnomAD |
|
CA8051771 rs539311609 |
818 | K>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1238015032 CA395872339 |
818 | K>Q | No |
ClinGen TOPMed gnomAD |
|
rs1409767769 CA395872349 |
819 | A>S | No |
ClinGen TOPMed |
|
CA395872348 rs1409767769 COSM262425 |
819 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs1187329498 CA395872353 |
819 | A>V | No |
ClinGen gnomAD |
|
CA395873352 rs1301012583 |
822 | L>S | No |
ClinGen TOPMed |
|
rs575509512 CA8051791 |
823 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
COSM262426 CA8051792 rs768930237 |
823 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA281268356 rs768930237 |
823 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395873361 rs575509512 |
823 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8051797 rs778481419 |
824 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051795 rs61755272 |
824 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs61755272 CA8051796 |
824 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1436148419 CA395873385 |
825 | N>D | No |
ClinGen gnomAD |
|
rs747787438 CA8051798 |
825 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051799 rs771795137 |
826 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA281268396 rs996538941 |
828 | S>* | No |
ClinGen Ensembl |
|
rs770915641 CA8051802 |
830 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770915641 CA395873452 |
830 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770915641 CA8051803 |
830 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1166816311 CA395873465 |
831 | G>V | No |
ClinGen gnomAD |
|
rs765335094 CA8051805 |
832 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs765335094 CA10648458 |
832 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA281268448 rs761818945 |
835 | L>F | No |
ClinGen Ensembl |
|
CA8051807 rs763192145 |
836 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051806 rs752881716 |
836 | I>V | No |
ClinGen ExAC gnomAD |
|
rs751914672 CA8051809 |
838 | C>R | No |
ClinGen ExAC gnomAD |
|
rs781781095 CA8051811 |
839 | A>V | No |
ClinGen ExAC |
|
CA281268511 rs913651690 |
841 | H>R | No |
ClinGen TOPMed gnomAD |
|
rs754471017 CA8051813 |
842 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395873639 rs1465628415 |
844 | Q>R | No |
ClinGen gnomAD |
|
CA8051817 rs104895486 |
849 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA150277 COSM1378213 VAR_073248 rs104895486 |
849 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs1412993795 CA395873767 |
850 | L>P | No |
ClinGen gnomAD |
|
rs767998441 CA8051844 |
853 | N>Y | No |
ClinGen ExAC gnomAD |
|
CA395873814 rs1386587784 |
857 | D>G | No |
ClinGen TOPMed gnomAD |
|
CA8051846 rs760938311 |
858 | G>S | No |
ClinGen ExAC gnomAD |
|
CA8051847 rs766980553 |
859 | C>Y | No |
ClinGen ExAC |
|
CA8051850 rs763542516 |
861 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395873846 rs1245181200 |
862 | S>Y | No |
ClinGen TOPMed |
|
rs756832040 CA8051851 |
863 | M>I | No |
ClinGen ExAC gnomAD |
|
rs104895447 CA395873849 |
863 | M>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8051852 rs780975637 |
864 | A>T | No |
ClinGen ExAC gnomAD |
|
CA395873859 rs1478226800 |
864 | A>V | No |
ClinGen gnomAD |
|
rs1000799073 CA281269931 |
866 | L>V | No |
ClinGen Ensembl |
|
rs745733405 CA8051853 |
867 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395873883 rs1373524198 |
868 | A>V | No |
ClinGen TOPMed gnomAD |
|
rs749157324 CA8051856 |
869 | C>F | No |
ClinGen ExAC gnomAD |
|
rs780077950 CA8051855 |
869 | C>G | No |
ClinGen ExAC gnomAD |
|
CA395873885 rs780077950 |
869 | C>R | No |
ClinGen ExAC gnomAD |
|
CA8051858 rs201806207 |
872 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA395873941 rs1333237516 |
877 | R>G | No |
ClinGen TOPMed gnomAD |
|
rs1314897129 CA395874235 COSM1217546 |
879 | G>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA8051908 rs374506720 |
880 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA395874242 rs1212452159 |
880 | N>Y | No |
ClinGen TOPMed |
|
CA281272709 rs146276010 |
883 | I>L | No |
ClinGen ESP TOPMed gnomAD |
|
CA395874287 rs776394582 |
883 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8051910 rs776394582 |
883 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395874293 rs1210188970 |
884 | T>A | No |
ClinGen gnomAD |
|
rs759456303 CA8051911 |
885 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs565200911 CA8051914 |
886 | A>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs376366287 CA8051913 |
886 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA395874316 COSM3691035 rs376366287 |
886 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
rs565200911 CA281272736 |
886 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA395874336 rs1267396833 |
888 | A>S | No |
ClinGen Ensembl |
|
CA8051915 rs764244331 |
889 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs371163141 CA8051918 |
891 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA281272786 rs201884393 |
893 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs201884393 CA8051922 |
893 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs769101191 CA8051923 |
896 | R>* | No |
ClinGen ExAC gnomAD |
|
CA395874435 rs201831159 |
896 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8051924 rs201831159 |
896 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1297765740 CA395874439 |
897 | G>S | No |
ClinGen TOPMed gnomAD |
|
CA8051925 rs746542083 |
897 | G>V | No |
ClinGen ExAC gnomAD |
|
CA8051926 rs770454777 |
899 | T>I | No |
ClinGen ExAC gnomAD |
|
rs200428513 CA8051930 |
902 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs200428513 CA8051931 |
902 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8051929 rs201035873 |
902 | Q>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs750560134 CA8051954 |
906 | F>Y | No |
ClinGen ExAC gnomAD |
|
CA8051956 rs142376491 |
908 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs2066845 CA8051955 |
908 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1354091032 CA395875046 |
910 | R>I | No |
ClinGen gnomAD |
|
CA395875055 rs1357306900 |
911 | V>M | No |
ClinGen Ensembl |
|
rs779300567 CA8051958 |
912 | G>A | No |
ClinGen ExAC gnomAD |
|
CA395875086 rs104895451 |
913 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1274010582 CA395875078 |
913 | D>N | No |
ClinGen gnomAD |
|
rs758913334 CA8051959 |
914 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs778408661 CA8051960 |
916 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395875115 rs778408661 |
916 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs553794692 CA8051961 |
917 | Q>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs104895452 CA150302 VAR_012702 |
918 | A>D | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs769395722 CA8051962 |
918 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395875170 rs1188261459 |
921 | E>K | No |
ClinGen gnomAD |
|
rs104895453 COSM703526 CA395875217 |
924 | G>V | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
rs774129547 CA8051964 |
925 | D>E | No |
ClinGen ExAC |
|
rs545734771 CA395875230 |
925 | D>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs761500764 CA8051965 |
926 | H>P | No |
ClinGen ExAC gnomAD |
|
rs1242042498 CA395875250 |
926 | H>Q | No |
ClinGen TOPMed |
|
CA8051966 rs772064514 |
928 | S>N | No |
ClinGen ExAC gnomAD |
|
rs771833402 CA8051986 |
934 | L>V | No |
ClinGen ExAC gnomAD |
|
rs746911440 CA395875569 |
935 | V>L | No |
ClinGen ExAC gnomAD |
|
rs746911440 CA8051988 |
935 | V>M | No |
ClinGen ExAC gnomAD |
|
CA281276380 rs542558237 |
936 | G>E | No |
ClinGen 1000Genomes |
|
rs770924038 CA8051989 |
938 | N>S | No |
ClinGen ExAC gnomAD |
|
CA8051990 rs201781416 |
939 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8051992 rs775540348 |
943 | G>D | No |
ClinGen ExAC gnomAD |
|
rs752141641 CA8051995 |
944 | A>G | No |
ClinGen ExAC gnomAD |
|
rs764503364 CA8051994 |
944 | A>T | No |
ClinGen ExAC gnomAD |
|
rs752141641 CA395875682 |
944 | A>V | No |
ClinGen ExAC gnomAD |
|
CA395875690 rs1394622344 |
945 | Q>* | No |
ClinGen gnomAD |
|
rs1464578513 CA395875699 |
945 | Q>H | No |
ClinGen gnomAD |
|
rs1359353057 CA395875711 |
946 | A>G | No |
ClinGen TOPMed |
|
rs757770809 CA395875717 |
947 | L>* | No |
ClinGen ExAC gnomAD |
|
CA395875722 rs765820451 |
947 | L>F | No |
ClinGen ExAC gnomAD |
|
CA8051996 rs757770809 |
947 | L>W | No |
ClinGen ExAC gnomAD |
|
CA8051998 rs753454914 |
949 | L>R | No |
ClinGen ExAC gnomAD |
|
rs527892258 CA8051999 |
950 | M>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs527892258 CA8052000 |
950 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
RCV000788649 CA281276438 rs768561004 |
951 | L>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA8052001 rs375705174 |
953 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA395875787 rs1303276743 |
953 | K>R | No |
ClinGen gnomAD |
|
VAR_012704 CA150311 rs5743291 |
955 | V>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs746965976 CA8052003 |
958 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1338268997 CA395875860 |
959 | E>K | No |
ClinGen gnomAD |
|
rs752353565 CA8052018 |
965 | N>S | No |
ClinGen ExAC gnomAD |
|
rs189453919 CA8052020 |
966 | H>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA281280615 rs528345270 |
969 | D>N | No |
ClinGen Ensembl |
|
CA8052021 rs371389581 |
970 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1187029221 CA395876371 |
971 | G>D | No |
ClinGen TOPMed gnomAD |
|
CA395876382 rs1251391668 |
973 | C>Y | No |
ClinGen TOPMed |
|
rs1337759230 CA395876393 |
975 | L>V | No |
ClinGen TOPMed |
|
rs148561632 CA8052024 COSM1324420 |
976 | A>T | ovary [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
CA281280653 rs779522908 |
976 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA395876408 rs1348658977 |
977 | E>D | No |
ClinGen gnomAD |
|
rs104895457 CA150320 |
978 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395876426 rs749533773 |
980 | K>N | No |
ClinGen ExAC gnomAD |
|
CA395876438 rs1397558369 |
982 | N>Y | No |
ClinGen gnomAD |
|
rs142904241 CA281283301 |
993 | N>D | No |
ClinGen ESP gnomAD |
|
rs147750423 CA281283323 |
993 | N>S | No |
ClinGen ESP ExAC gnomAD |
|
rs147750423 CA8052042 |
993 | N>T | No |
ClinGen ESP ExAC gnomAD |
|
rs1306240431 CA395876700 |
995 | I>T | No |
ClinGen TOPMed gnomAD |
|
CA8052043 rs768835583 |
995 | I>V | No |
ClinGen ExAC gnomAD |
|
CA395876709 rs1567407613 |
996 | T>N | No |
ClinGen Ensembl |
|
rs1238071864 CA395876748 |
999 | G>A | No |
ClinGen gnomAD |
|
CA395876744 rs1238071864 |
999 | G>E | No |
ClinGen gnomAD |
|
CA395876756 rs1394673170 |
1000 | A>E | No |
ClinGen TOPMed |
|
CA395876750 rs1282634444 |
1000 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs1486037435 CA395876772 |
1001 | E>D | No |
ClinGen gnomAD |
|
CA8052045 rs748277158 |
1003 | L>F | No |
ClinGen ExAC gnomAD |
|
rs772487940 CA8052046 |
1004 | L>V | No |
ClinGen ExAC gnomAD |
|
rs199883290 CA281283383 |
1006 | A>P | No |
ClinGen TOPMed |
|
rs199883290 CA395876824 |
1006 | A>T | No |
ClinGen TOPMed |
|
rs761083670 CA8052048 |
1007 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA395876841 rs869147565 |
1007 | L>P | No |
ClinGen Ensembl |
|
rs761083670 CA395876837 |
1007 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8052049 rs771490210 |
1009 | R>G | No |
ClinGen ExAC gnomAD |
|
CA395876864 rs1395205447 |
1009 | R>K | No |
ClinGen gnomAD |
|
rs367905706 CA8052050 |
1010 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1420000527 CA395876941 |
1015 | E>Q | No |
ClinGen TOPMed |
|
rs574467124 CA281283437 |
1016 | V>I | No |
ClinGen 1000Genomes |
|
CA8052065 rs146435555 |
1018 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
rs771267307 CA8052066 |
1018 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs104895491 CA8052067 |
1019 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8052069 rs5743295 |
1019 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM971308 CA8052068 rs5743295 |
1019 | R>Q | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs760568789 CA8052073 |
1021 | N>K | No |
ClinGen ExAC gnomAD |
|
rs772890413 CA8052072 |
1021 | N>S | No |
ClinGen ExAC gnomAD |
|
CA281285159 rs961472078 |
1023 | F>S | No |
ClinGen Ensembl |
|
rs1229880750 CA395877054 |
1025 | L>P | No |
ClinGen TOPMed |
|
CA395877057 rs1316474594 |
1026 | E>* | No |
ClinGen gnomAD |
|
rs1215899888 CA395877070 |
1027 | E>D | No |
ClinGen gnomAD |
|
rs752941888 CA281285162 |
1028 | V>A | No |
ClinGen TOPMed |
|
CA395877071 rs1340958111 |
1028 | V>I | No |
ClinGen TOPMed |
|
rs1451481984 CA395877096 |
1031 | L>H | No |
ClinGen gnomAD |
|
rs147874812 CA395877098 |
1032 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs147874812 CA281285188 |
1032 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8052076 rs147874812 |
1032 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA281285205 rs942777757 |
1033 | C>F | No |
ClinGen TOPMed |
|
CA8052079 rs758469287 |
1036 | T>A | No |
ClinGen ExAC gnomAD |
|
CA395877136 rs1389938045 |
1038 | L>I | No |
ClinGen gnomAD |
|
rs757653432 CA8052082 |
1040 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
3 associated diseases with Q9HC29
[MIM: 186580]: Blau syndrome (BLAUS)
An autosomal dominant inflammatory disorder characterized by the formation of immune granulomas invading the skin, joints and eye. Other organs may be involved. Clinical manifestations are variable and include early-onset granulomatous arthritis, uveitis and skin rash. Blindness, joint destruction and visceral involvement have been reported in severe cases. {ECO:0000269|PubMed:11528384, ECO:0000269|PubMed:15459013, ECO:0000269|PubMed:15812565, ECO:0000269|PubMed:19116920, ECO:0000269|PubMed:19169908, ECO:0000269|PubMed:19359344, ECO:0000269|PubMed:19479837, ECO:0000269|PubMed:20199415, ECO:0000269|PubMed:24960071, ECO:0000269|PubMed:25093298, ECO:0000269|PubMed:25692065, ECO:0000269|PubMed:25724124, ECO:0000269|PubMed:27812135}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 266600]: Inflammatory bowel disease 1 (IBD1)
A chronic, relapsing inflammation of the gastrointestinal tract with a complex etiology. It is subdivided into Crohn disease and ulcerative colitis phenotypes. Crohn disease may affect any part of the gastrointestinal tract from the mouth to the anus, but most frequently it involves the terminal ileum and colon. Bowel inflammation is transmural and discontinuous; it may contain granulomas or be associated with intestinal or perianal fistulas. In contrast, in ulcerative colitis, the inflammation is continuous and limited to rectal and colonic mucosal layers; fistulas and granulomas are not observed. Both diseases include extraintestinal inflammation of the skin, eyes, or joints. {ECO:0000269|PubMed:11385576, ECO:0000269|PubMed:15024686, ECO:0000269|PubMed:16485124, ECO:0000269|PubMed:24790089, ECO:0000269|PubMed:24960071, ECO:0000269|PubMed:27812135}. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
[MIM: 617321]: Yao syndrome (YAOS)
An autoinflammatory disease characterized by periodic fever, dermatitis, polyarthritis, leg swelling, and gastrointestinal and sicca-like symptoms. YAOS is a complex disease with multifactorial inheritance. {ECO:0000269|PubMed:21914217, ECO:0000269|PubMed:26070941}. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
Without disease ID
- An autosomal dominant inflammatory disorder characterized by the formation of immune granulomas invading the skin, joints and eye. Other organs may be involved. Clinical manifestations are variable and include early-onset granulomatous arthritis, uveitis and skin rash. Blindness, joint destruction and visceral involvement have been reported in severe cases. {ECO:0000269|PubMed:11528384, ECO:0000269|PubMed:15459013, ECO:0000269|PubMed:15812565, ECO:0000269|PubMed:19116920, ECO:0000269|PubMed:19169908, ECO:0000269|PubMed:19359344, ECO:0000269|PubMed:19479837, ECO:0000269|PubMed:20199415, ECO:0000269|PubMed:24960071, ECO:0000269|PubMed:25093298, ECO:0000269|PubMed:25692065, ECO:0000269|PubMed:25724124, ECO:0000269|PubMed:27812135}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A chronic, relapsing inflammation of the gastrointestinal tract with a complex etiology. It is subdivided into Crohn disease and ulcerative colitis phenotypes. Crohn disease may affect any part of the gastrointestinal tract from the mouth to the anus, but most frequently it involves the terminal ileum and colon. Bowel inflammation is transmural and discontinuous; it may contain granulomas or be associated with intestinal or perianal fistulas. In contrast, in ulcerative colitis, the inflammation is continuous and limited to rectal and colonic mucosal layers; fistulas and granulomas are not observed. Both diseases include extraintestinal inflammation of the skin, eyes, or joints. {ECO:0000269|PubMed:11385576, ECO:0000269|PubMed:15024686, ECO:0000269|PubMed:16485124, ECO:0000269|PubMed:24790089, ECO:0000269|PubMed:24960071, ECO:0000269|PubMed:27812135}. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
- An autoinflammatory disease characterized by periodic fever, dermatitis, polyarthritis, leg swelling, and gastrointestinal and sicca-like symptoms. YAOS is a complex disease with multifactorial inheritance. {ECO:0000269|PubMed:21914217, ECO:0000269|PubMed:26070941}. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
8 regional properties for Q9HC29
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | CARD domain | 26 - 120 | IPR001315-1 |
domain | CARD domain | 134 - 218 | IPR001315-2 |
repeat | Leucine-rich repeat | 898 - 920 | IPR001611-1 |
repeat | Leucine-rich repeat | 927 - 948 | IPR001611-2 |
repeat | Leucine-rich repeat | 981 - 1005 | IPR001611-3 |
domain | NACHT nucleoside triphosphatase | 293 - 462 | IPR007111 |
domain | NOD2, winged helix domain | 546 - 587 | IPR041075 |
domain | NACHT, LRR and PYD domains-containing protein, helical domain HD2 | 603 - 757 | IPR041267 |
Functions
Description | ||
---|---|---|
EC Number | ||
Subcellular Localization |
|
|
PANTHER Family | PTHR24106 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
PANTHER Subfamily | PTHR24106:SF64 | NUCLEOTIDE-BINDING OLIGOMERIZATION DOMAIN-CONTAINING PROTEIN 2 |
PANTHER Protein Class | scaffold/adaptor protein | |
PANTHER Pathway Category | No pathway information available |
12 GO annotations of cellular component
Name | Definition |
---|---|
anchored component of plasma membrane | The component of the plasma membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group, that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping. |
basolateral plasma membrane | The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis. |
cell surface | The external part of the cell wall and/or plasma membrane. |
cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
cytoskeleton | A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. |
cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
phagocytic vesicle | A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis. |
plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
protein-containing complex | A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together. |
vesicle | Any small, fluid-filled, spherical organelle enclosed by membrane. |
11 GO annotations of molecular function
Name | Definition |
---|---|
actin binding | Binding to monomeric or multimeric forms of actin, including actin filaments. |
ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
CARD domain binding | Binding to a CARD (N-terminal caspase recruitment) domain, a protein-protein interaction domain that belongs to the death domain-fold superfamily. These protein molecule families are similar in structure with each consisting of six or seven anti-parallel alpha-helices that form highly specific homophilic interactions between signaling partners. CARD exists in the N-terminal prodomains of several caspases and in apoptosis-regulatory proteins and mediates the assembly of CARD-containing proteins that participate in activation or suppression of CARD carrying members of the caspase family. |
enzyme binding | Binding to an enzyme, a protein with catalytic activity. |
Hsp70 protein binding | Binding to a Hsp70 protein, heat shock proteins around 70kDa in size. |
Hsp90 protein binding | Binding to Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size. |
muramyl dipeptide binding | Interacting selectively and non-covalently, in a non-covalent manner, with muramyl dipeptide; muramyl dipeptide is derived from peptidoglycan. |
pattern recognition receptor activity | Combining with a pathogen-associated molecular pattern (PAMP), a structure conserved among microbial species to initiate an innate immune response. |
peptidoglycan binding | Interacting selectively and non-covalently, in a non-covalent manner, with peptidoglycan, any of a class of glycoconjugates found in bacterial cell walls. |
protein kinase binding | Binding to a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate. |
protein-containing complex binding | Binding to a macromolecular complex. |
69 GO annotations of biological process
Name | Definition |
---|---|
activation of immune response | Any process that initiates an immune response. |
cellular response to lipopolysaccharide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria. |
cellular response to muramyl dipeptide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan. |
cellular response to organic cyclic compound | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic compound stimulus. |
cellular response to peptidoglycan | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule. |
defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. |
defense response to bacterium | Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism. |
defense response to Gram-positive bacterium | Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism. |
detection of bacterium | The series of events in which a stimulus from a bacterium is received and converted into a molecular signal. |
detection of biotic stimulus | The series of events in which a biotic stimulus, one caused or produced by a living organism, is received and converted into a molecular signal. |
detection of muramyl dipeptide | The series of events in which a muramyl dipeptide stimulus is received by a cell and converted into a molecular signal. Muramyl dipeptide is derived from peptidoglycan. |
innate immune response | Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. |
innate immune response in mucosa | Any process of the innate immune response that takes place in the mucosal tissues. |
intracellular signal transduction | The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell. |
maintenance of gastrointestinal epithelium | Protection of epithelial surfaces of the gastrointestinal tract from proteolytic and caustic digestive agents. |
negative regulation of inflammatory response to antigenic stimulus | Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus. |
negative regulation of interferon-gamma production | Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon. |
negative regulation of interleukin-12 production | Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production. |
negative regulation of interleukin-18 production | Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-18 production. |
negative regulation of interleukin-2 production | Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-2 production. |
negative regulation of macrophage apoptotic process | Any process that stops, prevents, or reduces the frequency, rate or extent of macrophage apoptotic process. |
negative regulation of NF-kappaB transcription factor activity | Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB. |
negative regulation of T cell mediated immunity | Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell mediated immunity. |
negative regulation of toll-like receptor 2 signaling pathway | Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 2 signaling pathway. |
negative regulation of tumor necrosis factor production | Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production. |
nucleotide-binding oligomerization domain containing 2 signaling pathway | The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 2 (NOD2) protein receptor, and ending with regulation of a downstream cellular process. |
pattern recognition receptor signaling pathway | The series of molecular signals initiated by a ligand binding to a pattern recognition receptor (PRR), and ending with the regulation of a downstream cellular process, e.g. transcription. PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species, or damage-associated molecular pattern (DAMPs), endogenous molecules released from damaged cells. |
positive regulation of B cell activation | Any process that activates or increases the frequency, rate or extent of B cell activation. |
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria | Any process that activates or increases the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria. |
positive regulation of cytokine production involved in immune response | Any process that activates or increases the frequency, rate, or extent of cytokine production that contributes to an immune response. |
positive regulation of cytokine production involved in inflammatory response | Any process that activates or increases the frequency, rate or extent of cytokine production involved in inflammatory response. |
positive regulation of dendritic cell antigen processing and presentation | Any process that activates or increases the frequency, rate, or extent of dendritic cell antigen processing and presentation. |
positive regulation of dendritic cell cytokine production | Any process that activates or increases the frequency, rate, or extent of dendritic cell cytokine production. |
positive regulation of epithelial cell proliferation | Any process that activates or increases the rate or extent of epithelial cell proliferation. |
positive regulation of ERK1 and ERK2 cascade | Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade. |
positive regulation of gamma-delta T cell activation | Any process that activates or increases the frequency, rate or extent of gamma-delta T cell activation. |
positive regulation of humoral immune response mediated by circulating immunoglobulin | Any process that activates or increases the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin. |
positive regulation of I-kappaB kinase/NF-kappaB signaling | Any process that activates or increases the frequency, rate or extent of I-kappaB kinase/NF-kappaB signaling. |
positive regulation of innate immune response | Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection. |
positive regulation of interleukin-1 beta production | Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production. |
positive regulation of interleukin-10 production | Any process that activates or increases the frequency, rate, or extent of interleukin-10 production. |
positive regulation of interleukin-12 production | Any process that activates or increases the frequency, rate, or extent of interleukin-12 production. |
positive regulation of interleukin-17 production | Any process that activates or increases the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines. |
positive regulation of interleukin-6 production | Any process that activates or increases the frequency, rate, or extent of interleukin-6 production. |
positive regulation of interleukin-8 production | Any process that activates or increases the frequency, rate, or extent of interleukin-8 production. |
positive regulation of JNK cascade | Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade. |
positive regulation of MAP kinase activity | Any process that activates or increases the frequency, rate or extent of MAP kinase activity. |
positive regulation of monocyte chemotactic protein-1 production | Any process that activates or increases the frequency, rate, or extent of production of monocyte chemotactic protein-1. |
positive regulation of NF-kappaB transcription factor activity | Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB. |
positive regulation of NIK/NF-kappaB signaling | Any process that activates or increases the frequency, rate or extent of NIK/NF-kappaB signaling. |
positive regulation of nitric-oxide synthase biosynthetic process | Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric oxide synthase enzyme. |
positive regulation of Notch signaling pathway | Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway. |
positive regulation of oxidoreductase activity | Any process that activates or increases the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. |
positive regulation of peptidyl-tyrosine phosphorylation | Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine. |
positive regulation of phagocytosis | Any process that activates or increases the frequency, rate or extent of phagocytosis. |
positive regulation of phosphatidylinositol 3-kinase activity | Any process that activates or increases the frequency, rate or extent of phosphatidylinositol 3-kinase activity. |
positive regulation of prostaglandin-E synthase activity | Any process that activates or increases the frequency, rate or extent of prostaglandin-E synthase activity. |
positive regulation of prostaglandin-endoperoxide synthase activity | Any process that increases the rate, frequency or extent of prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O. |
positive regulation of protein K63-linked ubiquitination | Any process that activates or increases the frequency, rate or extent of protein K63-linked ubiquitination. |
positive regulation of stress-activated MAPK cascade | Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade. |
positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. |
positive regulation of tumor necrosis factor production | Any process that activates or increases the frequency, rate or extent of tumor necrosis factor production. |
positive regulation of type 2 immune response | Any process that activates or increases the frequency, rate, or extent of a type 2 immune response. |
positive regulation of xenophagy | Any process that activates or increases the frequency, rate or extent of xenophagy. |
regulation of inflammatory response | Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. |
regulation of neutrophil chemotaxis | Any process that modulates the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding. |
response to exogenous dsRNA | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus. |
response to muramyl dipeptide | Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan. |
response to nutrient | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus. |
3 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q6E804 | NOD2 | Nucleotide-binding oligomerization domain-containing protein 2 | Bos taurus (Bovine) | SS |
Q53B87 | NOD2 | Nucleotide-binding oligomerization domain-containing protein 2 | Pan troglodytes (Chimpanzee) | SS |
Q8K3Z0 | Nod2 | Nucleotide-binding oligomerization domain-containing protein 2 | Mus musculus (Mouse) | EV |
10 | 20 | 30 | 40 | 50 | 60 |
MGEEGGSASH | DEEERASVLL | GHSPGCEMCS | QEAFQAQRSQ | LVELLVSGSL | EGFESVLDWL |
70 | 80 | 90 | 100 | 110 | 120 |
LSWEVLSWED | YEGFHLLGQP | LSHLARRLLD | TVWNKGTWAC | QKLIAAAQEA | QADSQSPKLH |
130 | 140 | 150 | 160 | 170 | 180 |
GCWDPHSLHP | ARDLQSHRPA | IVRRLHSHVE | NMLDLAWERG | FVSQYECDEI | RLPIFTPSQR |
190 | 200 | 210 | 220 | 230 | 240 |
ARRLLDLATV | KANGLAAFLL | QHVQELPVPL | ALPLEAATCK | KYMAKLRTTV | SAQSRFLSTY |
250 | 260 | 270 | 280 | 290 | 300 |
DGAETLCLED | IYTENVLEVW | ADVGMAGPPQ | KSPATLGLEE | LFSTPGHLND | DADTVLVVGE |
310 | 320 | 330 | 340 | 350 | 360 |
AGSGKSTLLQ | RLHLLWAAGQ | DFQEFLFVFP | FSCRQLQCMA | KPLSVRTLLF | EHCCWPDVGQ |
370 | 380 | 390 | 400 | 410 | 420 |
EDIFQLLLDH | PDRVLLTFDG | FDEFKFRFTD | RERHCSPTDP | TSVQTLLFNL | LQGNLLKNAR |
430 | 440 | 450 | 460 | 470 | 480 |
KVVTSRPAAV | SAFLRKYIRT | EFNLKGFSEQ | GIELYLRKRH | HEPGVADRLI | RLLQETSALH |
490 | 500 | 510 | 520 | 530 | 540 |
GLCHLPVFSW | MVSKCHQELL | LQEGGSPKTT | TDMYLLILQH | FLLHATPPDS | ASQGLGPSLL |
550 | 560 | 570 | 580 | 590 | 600 |
RGRLPTLLHL | GRLALWGLGM | CCYVFSAQQL | QAAQVSPDDI | SLGFLVRAKG | VVPGSTAPLE |
610 | 620 | 630 | 640 | 650 | 660 |
FLHITFQCFF | AAFYLALSAD | VPPALLRHLF | NCGRPGNSPM | ARLLPTMCIQ | ASEGKDSSVA |
670 | 680 | 690 | 700 | 710 | 720 |
ALLQKAEPHN | LQITAAFLAG | LLSREHWGLL | AECQTSEKAL | LRRQACARWC | LARSLRKHFH |
730 | 740 | 750 | 760 | 770 | 780 |
SIPPAAPGEA | KSVHAMPGFI | WLIRSLYEMQ | EERLARKAAR | GLNVGHLKLT | FCSVGPTECA |
790 | 800 | 810 | 820 | 830 | 840 |
ALAFVLQHLR | RPVALQLDYN | SVGDIGVEQL | LPCLGVCKAL | YLRDNNISDR | GICKLIECAL |
850 | 860 | 870 | 880 | 890 | 900 |
HCEQLQKLAL | FNNKLTDGCA | HSMAKLLACR | QNFLALRLGN | NYITAAGAQV | LAEGLRGNTS |
910 | 920 | 930 | 940 | 950 | 960 |
LQFLGFWGNR | VGDEGAQALA | EALGDHQSLR | WLSLVGNNIG | SVGAQALALM | LAKNVMLEEL |
970 | 980 | 990 | 1000 | 1010 | 1020 |
CLEENHLQDE | GVCSLAEGLK | KNSSLKILKL | SNNCITYLGA | EALLQALERN | DTILEVWLRG |
1030 | |||||
NTFSLEEVDK | LGCRDTRLLL |