Q9C029
Gene name |
TRIM7 (GNIP, RNF90) |
Protein name |
E3 ubiquitin-protein ligase TRIM7 |
Names |
Glycogenin-interacting protein, RING finger protein 90, Tripartite motif-containing protein 7 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:81786 |
EC number |
2.3.2.27: Aminoacyltransferases |
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

20 structures for Q9C029
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
6UMA | X-ray | 160 A | A/B | 338-511 | PDB |
6UMB | X-ray | 180 A | A/B | 338-511 | PDB |
7OVX | X-ray | 170 A | A | 342-511 | PDB |
7OW2 | X-ray | 217 A | A/B/C/D | 342-511 | PDB |
7W0Q | X-ray | 110 A | A | 338-511 | PDB |
7W0S | X-ray | 140 A | B/C/E | 338-511 | PDB |
7W0T | X-ray | 157 A | B/C/F | 338-511 | PDB |
7X6Y | X-ray | 139 A | A | 338-511 | PDB |
7X6Z | X-ray | 143 A | A | 338-511 | PDB |
7X70 | X-ray | 125 A | A | 338-511 | PDB |
7Y3A | X-ray | 170 A | A/B/C | 338-511 | PDB |
7Y3B | X-ray | 176 A | A | 338-511 | PDB |
7Y3C | X-ray | 171 A | A | 338-511 | PDB |
8A5L | X-ray | 162 A | A | 342-511 | PDB |
8A5M | X-ray | 292 A | A/B | 342-511 | PDB |
8A8X | X-ray | 237 A | A/C | 342-511 | PDB |
8R5B | X-ray | 160 A | A/B | 338-511 | PDB |
8R5C | X-ray | 160 A | A | 338-511 | PDB |
8R5D | X-ray | 180 A | A/B | 338-511 | PDB |
AF-Q9C029-F1 | Predicted | AlphaFoldDB |
531 variants for Q9C029
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
rs775824431 CA3610507 |
2 | A>E | No |
ClinGen ExAC gnomAD |
|
CA362535615 rs1253817540 |
3 | A>T | No |
ClinGen TOPMed |
|
rs1021523196 CA133289827 |
4 | V>L | No |
ClinGen TOPMed gnomAD |
|
rs1021523196 CA362535604 |
4 | V>M | No |
ClinGen TOPMed gnomAD |
|
rs1037427137 CA133289822 |
5 | G>E | No |
ClinGen Ensembl |
|
rs770499609 CA3610506 |
5 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610505 rs748728945 |
9 | G>S | No |
ClinGen ExAC gnomAD |
|
CA133289809 rs748981864 |
10 | P>L | No |
ClinGen Ensembl |
|
rs886586787 CA133289807 |
11 | G>* | No |
ClinGen TOPMed |
|
CA3610504 rs777522462 |
13 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs777522462 CA133289803 |
13 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610503 rs769328135 |
15 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610502 VAR_017399 rs3857300 |
18 | A>S | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA362535430 rs1209287307 |
18 | A>V | No |
ClinGen gnomAD |
|
CA133289795 rs916802670 |
20 | A>V | No |
ClinGen TOPMed gnomAD |
|
rs991483529 CA133289793 |
22 | E>K | No |
ClinGen TOPMed gnomAD |
|
CA362535366 rs1312509327 |
23 | L>P | No |
ClinGen gnomAD |
|
CA362535333 rs1303001056 |
26 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA362535286 rs1217049680 |
28 | T>K | No |
ClinGen gnomAD |
|
CA362535284 rs1217049680 |
28 | T>R | No |
ClinGen gnomAD |
|
rs1276273807 CA362535267 |
29 | C>* | No |
ClinGen TOPMed |
|
rs1320711789 CA362535246 |
31 | I>T | No |
ClinGen gnomAD |
|
rs781148067 CA3610501 |
34 | E>A | No |
ClinGen ExAC TOPMed |
|
CA362535203 rs1391519349 |
36 | F>L | No |
ClinGen gnomAD |
|
CA362535200 rs1346500928 |
36 | F>Y | No |
ClinGen gnomAD |
|
rs1295676164 CA362535195 |
37 | R>C | No |
ClinGen gnomAD |
|
rs1319101546 CA362535179 |
39 | P>R | No |
ClinGen gnomAD |
|
rs751564913 CA3610499 |
40 | V>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs978137312 CA133289782 |
40 | V>L | No |
ClinGen gnomAD |
|
CA133289770 rs966790095 |
42 | V>I | No |
ClinGen gnomAD |
|
CA362535160 rs1394685689 |
43 | E>* | No |
ClinGen gnomAD |
|
CA362535144 rs1478441260 |
45 | G>C | No |
ClinGen TOPMed |
|
CA362535140 rs1246143199 |
46 | H>N | No |
ClinGen gnomAD |
|
CA3610495 rs750462006 |
47 | S>N | No |
ClinGen ExAC gnomAD |
|
CA362535126 rs765551552 |
47 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1207742429 CA362535114 |
49 | C>Y | No |
ClinGen gnomAD |
|
CA362535106 rs1297836605 |
50 | R>H | No |
ClinGen TOPMed gnomAD |
|
CA362535101 rs1344901136 |
51 | A>S | No |
ClinGen TOPMed |
|
rs1230038366 CA362535097 |
52 | C>S | No |
ClinGen gnomAD |
|
rs1362335300 CA362535084 |
53 | I>T | No |
ClinGen TOPMed gnomAD |
|
CA362535078 rs1382086145 |
54 | G>A | No |
ClinGen gnomAD |
|
CA362535081 rs1296085259 CA362535082 |
54 | G>R | No |
ClinGen TOPMed gnomAD |
|
CA362535077 rs1382086145 |
54 | G>V | No |
ClinGen gnomAD |
|
CA362535076 rs1273048413 |
55 | R>C | No |
ClinGen TOPMed |
|
rs1369436544 CA362535073 |
55 | R>H | No |
ClinGen TOPMed |
|
rs1219648137 CA362535052 |
58 | E>Q | No |
ClinGen TOPMed |
|
CA3610491 rs753990124 |
59 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA133289747 rs954710762 |
59 | R>L | No |
ClinGen Ensembl |
|
CA362535044 rs753990124 |
59 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362535037 rs1375125212 |
60 | P>L | No |
ClinGen gnomAD |
|
CA133289742 rs1051814411 |
60 | P>S | No |
ClinGen TOPMed gnomAD |
|
CA3610490 rs764478278 |
61 | G>D | No |
ClinGen ExAC gnomAD |
|
rs1582242725 CA362535020 |
63 | G>V | No |
ClinGen Ensembl |
|
CA362535016 rs1245543846 |
64 | S>C | No |
ClinGen TOPMed |
|
rs933396997 CA133289736 |
66 | G>A | No |
ClinGen TOPMed gnomAD |
|
CA362534990 rs1438092437 |
69 | T>P | No |
ClinGen TOPMed |
|
rs924729003 CA362534984 |
70 | R>C | No |
ClinGen TOPMed gnomAD |
|
rs924729003 CA133289734 |
70 | R>G | No |
ClinGen TOPMed gnomAD |
|
CA133289729 rs1028885084 |
70 | R>L | No |
ClinGen TOPMed |
|
CA362534979 rs1488098637 |
71 | A>P | No |
ClinGen gnomAD |
|
rs2770946 CA362534967 |
73 | P>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs772430239 CA3610487 |
73 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA133289705 rs772430239 |
73 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
VAR_017400 CA3610488 rs2770946 |
73 | P>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA3610486 rs762593205 |
75 | P>L | No |
ClinGen ExAC gnomAD |
|
rs1309578778 CA362534945 |
77 | P>S | No |
ClinGen TOPMed |
|
CA362534930 rs1266975905 |
79 | P>R | No |
ClinGen TOPMed gnomAD |
|
rs1226189129 CA362534924 |
80 | Q>P | No |
ClinGen TOPMed |
|
CA362534923 rs1226189129 |
80 | Q>R | No |
ClinGen TOPMed |
|
rs1203855120 CA362534915 |
81 | C>Y | No |
ClinGen TOPMed gnomAD |
|
rs1485208513 CA362534888 |
85 | A>E | No |
ClinGen gnomAD |
|
CA362534883 rs1206804809 |
86 | R>C | No |
ClinGen gnomAD |
|
CA362534875 rs1273205470 |
87 | P>L | No |
ClinGen gnomAD |
|
CA133289696 rs1015960860 |
87 | P>S | No |
ClinGen TOPMed gnomAD |
|
CA362534871 rs1341657339 |
88 | S>N | No |
ClinGen gnomAD |
|
rs1315415269 CA362534863 |
89 | Q>P | No |
ClinGen gnomAD |
|
CA362534855 rs1308874358 |
90 | L>P | No |
ClinGen gnomAD |
|
CA362534850 rs1167479970 |
91 | R>Q | No |
ClinGen gnomAD |
|
rs1368933967 CA362534852 |
91 | R>W | No |
ClinGen gnomAD |
|
CA362534845 rs1162538057 |
92 | P>H | No |
ClinGen gnomAD |
|
CA362534846 rs1370171474 |
92 | P>S | No |
ClinGen gnomAD |
|
rs1252187637 CA362534839 |
93 | N>T | No |
ClinGen TOPMed gnomAD |
|
CA362534830 rs1481899911 |
94 | R>L | No |
ClinGen gnomAD |
|
CA362534832 rs1481899911 |
94 | R>Q | No |
ClinGen gnomAD |
|
rs1183909870 CA362534834 |
94 | R>W | No |
ClinGen gnomAD |
|
rs2770945 CA3610484 VAR_017401 |
95 | Q>E | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA362534823 rs1267790342 |
95 | Q>H | No |
ClinGen gnomAD |
|
rs886221933 CA133289667 |
96 | L>P | No |
ClinGen TOPMed gnomAD |
|
rs747807411 CA3610483 |
96 | L>V | No |
ClinGen ExAC gnomAD |
|
CA362534814 rs1412060069 |
97 | A>V | No |
ClinGen gnomAD |
|
rs1328411119 CA362534813 |
98 | A>T | No |
ClinGen gnomAD |
|
CA362534810 rs1387446278 |
98 | A>V | No |
ClinGen gnomAD |
|
rs1291720178 CA362534807 |
99 | V>M | No |
ClinGen gnomAD |
|
CA362534798 rs1161183374 |
100 | A>D | No |
ClinGen gnomAD |
|
rs1412598850 CA362534801 |
100 | A>T | No |
ClinGen gnomAD |
|
CA362534790 rs1471468116 |
101 | T>M | No |
ClinGen gnomAD |
|
CA362534789 rs1199084826 |
102 | L>I | No |
ClinGen gnomAD |
|
rs1452842801 CA362534779 |
103 | L>P | No |
ClinGen gnomAD |
|
rs1470412474 CA362534774 |
104 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA362534778 rs1212508113 |
104 | R>W | No |
ClinGen gnomAD |
|
rs746767463 CA3610480 |
105 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362534771 rs1269288610 |
105 | R>H | No |
ClinGen gnomAD |
|
CA362534769 TCGA novel rs1269288610 |
105 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs746767463 CA362534773 |
105 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362534759 rs1230680091 |
107 | S>G | No |
ClinGen gnomAD |
|
rs374579277 CA133289653 |
107 | S>I | No |
ClinGen Ensembl |
|
rs1348922783 CA362534755 |
107 | S>R | No |
ClinGen TOPMed gnomAD |
|
CA3610479 rs780102513 |
109 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs551119310 CA3610478 |
110 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA133289649 rs551119310 |
110 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA362534739 rs1299353225 |
111 | A>T | No |
ClinGen gnomAD |
|
CA133289628 rs1002744943 |
113 | P>A | No |
ClinGen TOPMed |
|
CA362534723 rs1389336761 |
113 | P>R | No |
ClinGen gnomAD |
|
rs548719872 CA133289625 |
114 | G>A | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
rs548719872 CA362534719 |
114 | G>E | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
rs754085772 CA362534710 |
115 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 116 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1466933811 CA362534699 |
117 | G>E | No |
ClinGen TOPMed |
|
CA3610473 CA362534701 rs528918248 |
117 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA362534700 rs528918248 |
117 | G>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA362534692 rs1478841147 |
118 | S>C | No |
ClinGen TOPMed gnomAD |
|
CA362534693 rs1478841147 |
118 | S>Y | No |
ClinGen TOPMed gnomAD |
|
CA362534686 rs1375568689 |
119 | Q>R | No |
ClinGen gnomAD |
|
rs1192510086 CA362534665 |
122 | A>V | No |
ClinGen gnomAD |
|
CA3610472 rs112348888 |
123 | A>D | No |
ClinGen ExAC gnomAD |
|
rs1246856923 CA362534659 |
124 | R>G | No |
ClinGen TOPMed gnomAD |
|
rs1340529911 CA362534651 |
125 | A>E | No |
ClinGen TOPMed |
|
rs563116759 CA3610471 |
126 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA3610470 rs543589179 |
127 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1201371353 CA362534629 |
129 | R>H | No |
ClinGen TOPMed gnomAD |
|
rs1201371353 CA362534627 |
129 | R>L | No |
ClinGen TOPMed gnomAD |
|
rs764861280 CA3610467 |
130 | C>* | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 130 | C>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA3610469 rs759974603 |
130 | C>Y | No |
ClinGen ExAC gnomAD |
|
CA362534596 rs1275834012 |
134 | G>D | No |
ClinGen gnomAD |
|
rs1037921494 CA133289590 |
134 | G>S | No |
ClinGen TOPMed |
|
rs889412812 CA133289585 |
135 | E>A | No |
ClinGen TOPMed gnomAD |
|
CA362534589 rs889412812 |
135 | E>G | No |
ClinGen TOPMed gnomAD |
|
rs1428487787 CA362534573 |
137 | F>L | No |
ClinGen gnomAD |
|
rs1334651364 CA362534548 |
141 | C>G | No |
ClinGen gnomAD |
|
TCGA novel | 141 | C>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA133289573 rs895323302 |
142 | Q>R | No |
ClinGen gnomAD |
|
rs1399679729 CA362534535 |
143 | D>N | No |
ClinGen gnomAD |
|
CA362534527 rs867397110 |
144 | D>N | No |
ClinGen TOPMed gnomAD |
|
CA133289569 rs867397110 |
144 | D>Y | No |
ClinGen TOPMed gnomAD |
|
CA133289565 rs1055355050 |
145 | G>R | No |
ClinGen gnomAD |
|
rs768417440 CA3610464 |
147 | A>S | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 147 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA133289543 rs866917610 |
148 | I>T | No |
ClinGen Ensembl |
|
CA362534484 rs1242036496 |
149 | C>W | No |
ClinGen gnomAD |
|
CA362534474 rs1205553004 |
150 | V>E | No |
ClinGen TOPMed |
|
CA362534475 rs1205553004 |
150 | V>G | No |
ClinGen TOPMed |
|
rs1215995448 CA362534479 |
150 | V>L | No |
ClinGen TOPMed |
|
CA362534471 rs1582241809 |
151 | V>M | No |
ClinGen Ensembl |
|
CA133289536 rs933529678 |
152 | C>G | No |
ClinGen TOPMed |
|
CA362534452 rs1188725932 |
152 | C>Y | No |
ClinGen gnomAD |
|
rs577806516 CA133289529 |
153 | D>A | No |
ClinGen 1000Genomes |
|
CA133289523 rs1041799966 |
154 | R>C | No |
ClinGen TOPMed |
|
rs781642744 CA3610461 |
154 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1041799966 CA133289527 |
154 | R>S | No |
ClinGen TOPMed |
|
CA362534423 rs1295826336 COSM402754 |
155 | A>S | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs1359131802 CA362534418 |
155 | A>V | No |
ClinGen TOPMed |
|
rs1210359239 CA362534412 |
156 | R>C | No |
ClinGen gnomAD |
|
rs1276936413 CA362534404 |
157 | E>K | No |
ClinGen gnomAD |
|
CA133289516 rs978103051 |
158 | H>R | No |
ClinGen TOPMed |
|
CA362534379 rs1338712491 |
159 | R>C | No |
ClinGen gnomAD |
|
CA362534371 rs1284686293 |
159 | R>H | No |
ClinGen gnomAD |
|
CA362534366 rs1449982950 |
160 | E>Q | No |
ClinGen gnomAD |
|
rs778777301 CA3610457 |
161 | H>D | No |
ClinGen ExAC gnomAD |
|
rs1561652720 CA362534337 |
162 | A>S | No |
ClinGen Ensembl |
|
CA362534323 rs1372007037 |
163 | V>L | No |
ClinGen TOPMed gnomAD |
|
CA362534241 rs1449652382 |
167 | D>A | No |
ClinGen TOPMed |
|
rs749338467 CA3610453 |
168 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749338467 CA133289458 |
168 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610451 rs756317118 |
169 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362534204 rs1473982629 |
169 | A>V | No |
ClinGen TOPMed gnomAD |
|
rs752906863 CA3610450 |
170 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1483545738 CA362534178 |
171 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1254209058 CA362534167 |
172 | E>K | No |
ClinGen gnomAD |
|
rs1202583622 CA362534111 |
174 | K>N | No |
ClinGen TOPMed gnomAD |
|
rs1304454096 CA362533334 |
175 | E>G | No |
ClinGen TOPMed gnomAD |
|
CA3610432 rs373835929 |
178 | E>Q | No |
ClinGen ESP ExAC gnomAD |
|
CA3610431 rs147644326 |
179 | S>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3610430 rs147644326 |
179 | S>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3610429 rs751948749 |
182 | R>K | No |
ClinGen ExAC gnomAD |
|
rs1347251775 CA362533251 |
183 | V>A | No |
ClinGen gnomAD |
|
CA3610428 rs780763656 |
183 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610426 rs750889861 |
190 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362533168 rs1418778641 |
190 | D>G | No |
ClinGen gnomAD |
|
CA133289005 rs987868999 |
190 | D>N | No |
ClinGen Ensembl |
|
CA3610425 rs763726176 |
191 | C>Y | No |
ClinGen ExAC gnomAD |
|
rs1452629548 CA362533144 |
192 | E>G | No |
ClinGen gnomAD |
|
CA133288991 rs767501827 |
195 | R>G | No |
ClinGen TOPMed gnomAD |
|
CA133288989 rs767501827 |
195 | R>W | No |
ClinGen TOPMed gnomAD |
|
CA362533096 rs1214803252 |
197 | T>A | No |
ClinGen gnomAD |
|
rs1016938711 CA133288980 |
199 | K>E | No |
ClinGen gnomAD |
|
rs774122689 CA3610420 |
199 | K>T | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 200 | K>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs762881858 CA3610418 |
201 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1005522330 CA133288970 |
204 | E>Q | No |
ClinGen Ensembl |
|
CA133288967 rs951365809 |
204 | E>V | No |
ClinGen Ensembl |
|
rs773094746 CA3610417 |
205 | L>P | No |
ClinGen ExAC TOPMed |
|
CA3610415 rs748227112 |
206 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610365 rs544149971 |
208 | Q>H | No |
ClinGen 1000Genomes ExAC |
|
CA3610364 rs754533784 |
209 | M>T | No |
ClinGen ExAC TOPMed |
|
TCGA novel | 210 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA362532487 rs1451249026 |
210 | A>V | No |
ClinGen gnomAD |
|
CA3610362 rs201559417 |
211 | A>E | No |
ClinGen ExAC gnomAD |
|
rs201559417 CA362532476 |
211 | A>V | No |
ClinGen ExAC gnomAD |
|
rs758060160 CA362532447 |
214 | E>K | No |
ClinGen ExAC gnomAD |
|
rs758060160 CA3610360 |
214 | E>Q | No |
ClinGen ExAC gnomAD |
|
CA362532424 rs749975908 |
215 | K>N | No |
ClinGen ExAC gnomAD |
|
CA3610358 rs765108080 |
216 | V>L | No |
ClinGen ExAC gnomAD |
|
rs1207258713 | 218 | A>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
rs61743103 CA3610356 |
218 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3610355 rs764088743 |
220 | F>L | No |
ClinGen ExAC TOPMed |
|
rs760908037 CA3610354 |
223 | L>P | No |
ClinGen ExAC gnomAD |
|
CA3610352 rs61743096 |
225 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1165749393 CA362532323 |
225 | A>V | No |
ClinGen TOPMed |
|
rs141070470 CA3610351 |
226 | F>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3610349 rs150528571 |
227 | L>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA362532298 CA3610347 rs559432527 |
229 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed |
|
CA3610348 rs763206244 |
229 | E>Q | No |
ClinGen ExAC gnomAD |
|
COSM1436768 CA3610346 rs770269863 |
230 | Q>K | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs771530729 CA3610343 |
232 | G>D | No |
ClinGen ExAC gnomAD |
|
rs141530115 CA362532256 |
233 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs141530115 CA3610341 |
233 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1472073947 CA362532259 |
233 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA362532233 rs1360557072 |
235 | L>Q | No |
ClinGen TOPMed |
|
CA3610339 rs753573355 |
237 | R>C | No |
ClinGen ExAC gnomAD |
|
CA3610337 rs756137955 |
237 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs756137955 CA3610338 |
237 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362532143 rs1262512547 |
240 | E>K | No |
ClinGen TOPMed |
|
COSM3715054 COSM3715055 rs569307799 CA3610333 |
243 | R>Q | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
COSM1672195 COSM1672196 rs61739211 CA3610334 |
243 | R>W | prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
rs774647409 CA133287350 |
244 | E>G | No |
ClinGen Ensembl |
|
CA362532056 rs1582231019 |
245 | V>G | No |
ClinGen Ensembl |
|
CA133287344 rs1047928151 |
246 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs766481173 CA3610332 |
247 | Q>R | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 249 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs763431044 CA3610331 |
249 | Q>L | No |
ClinGen ExAC gnomAD |
|
CA362531995 rs1209787122 |
250 | N>K | No |
ClinGen gnomAD |
|
TCGA novel | 251 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs769447717 CA3610329 CA3610328 |
252 | N>K | No |
ClinGen ExAC gnomAD |
|
CA3610326 rs777070029 |
253 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610327 rs777070029 |
253 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362531950 rs1561648293 |
254 | A>V | No |
ClinGen Ensembl |
|
CA3610324 rs745457733 CA133287300 |
255 | Q>H | No |
ClinGen ExAC gnomAD |
|
CA3610320 CA3610321 rs748916038 |
257 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610319 rs777718999 |
257 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
VAR_052125 rs416574 CA3610318 |
258 | V>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs416574 CA362531908 |
258 | V>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA362531902 rs1416309402 |
259 | E>K | No |
ClinGen gnomAD |
|
CA133287272 rs958548562 |
261 | T>I | No |
ClinGen Ensembl |
|
rs1000549430 CA133287266 |
264 | S>T | No |
ClinGen Ensembl |
|
CA3610317 rs61737740 |
267 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3610316 rs781254469 |
268 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362531801 rs781254469 |
268 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs867856489 CA133287254 |
269 | Q>* | No |
ClinGen gnomAD |
|
rs376856007 CA3610313 |
272 | E>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs763089536 CA362531742 CA3610312 |
272 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362531699 rs890176791 |
276 | K>N | No |
ClinGen TOPMed |
|
rs750602893 CA3610311 |
278 | D>E | No |
ClinGen ExAC gnomAD |
|
CA362531671 rs1486813808 |
279 | L>P | No |
ClinGen TOPMed gnomAD |
|
CA3610310 rs765612355 |
280 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM285960 rs267600589 CA133286901 |
284 | E>K | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
CA3610294 rs143052397 |
285 | F>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs551698732 CA3610293 |
286 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA3610292 rs757682266 |
287 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA362531498 rs1223935132 |
287 | S>R | No |
ClinGen gnomAD |
|
CA3610291 rs116911833 |
288 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3610288 rs548655912 |
290 | S>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA362531466 rs548655912 |
290 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA3610287 rs765832844 |
290 | S>R | No |
ClinGen ExAC gnomAD |
|
CA362531463 rs548655912 |
290 | S>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs749941645 CA3610268 |
291 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610266 rs764771332 |
292 | C>G | No |
ClinGen ExAC gnomAD |
|
CA3610265 rs761587423 |
293 | S>G | No |
ClinGen ExAC gnomAD |
|
CA3610264 rs776297811 |
293 | S>R | No |
ClinGen ExAC gnomAD |
|
CA362531358 rs1266080978 |
295 | V>A | No |
ClinGen TOPMed |
|
rs760482731 CA3610262 |
296 | P>S | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 297 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA362531351 rs1178822447 |
297 | G>S | No |
ClinGen TOPMed |
|
rs1378689566 CA362531343 |
298 | P>S | No |
ClinGen TOPMed |
|
CA362531332 rs1453741582 |
299 | K>N | No |
ClinGen TOPMed |
|
CA3610258 rs778971294 |
301 | T>A | No |
ClinGen ExAC gnomAD |
|
CA362531321 rs1240009075 |
301 | T>I | No |
ClinGen TOPMed gnomAD |
|
rs752050805 CA3610256 |
302 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 303 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs145627318 CA3610254 |
304 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA3610252 rs781611089 |
306 | E>K | No |
ClinGen ExAC gnomAD |
|
rs755558773 CA3610251 |
307 | M>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel rs752070032 CA3610250 |
308 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC TOPMed gnomAD NCI-TCGA |
CA362531272 rs1287347345 |
309 | N>S | No |
ClinGen gnomAD |
|
rs1294761335 CA362531274 |
309 | N>Y | No |
ClinGen gnomAD |
|
rs761380942 CA3610248 |
311 | V>I | No |
ClinGen ExAC gnomAD |
|
rs761380942 CA362531260 |
311 | V>L | No |
ClinGen ExAC gnomAD |
|
rs763797079 CA3610246 |
313 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610247 rs753468703 |
313 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610245 rs760444617 |
314 | V>I | No |
ClinGen ExAC gnomAD |
|
rs1236876523 CA362531221 |
317 | K>* | No |
ClinGen TOPMed |
|
rs1171009686 CA362531217 |
317 | K>N | No |
ClinGen TOPMed gnomAD |
|
rs1430098363 CA362531212 |
318 | T>N | No |
ClinGen gnomAD |
|
rs202093181 CA3610243 |
319 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA362531174 rs201350955 |
324 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA3610242 rs201350955 COSM1066918 COSM1595307 |
324 | M>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
rs774225201 CA3610241 |
326 | K>Q | No |
ClinGen ExAC gnomAD |
|
rs937116271 CA133286708 |
327 | K>E | No |
ClinGen TOPMed |
|
CA362531150 CA3610240 rs771048476 |
327 | K>N | No |
ClinGen ExAC gnomAD |
|
rs754838547 CA3610207 |
330 | E>G | No |
ClinGen ExAC |
|
CA362531133 rs1191249339 |
330 | E>K | No |
ClinGen TOPMed |
|
rs374765751 CA133286507 |
331 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1344212999 CA362531114 |
331 | D>N | No |
ClinGen gnomAD |
|
CA3610203 rs371275633 |
333 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA3610202 rs371275633 |
333 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA3610205 rs148921840 |
333 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1356390909 CA362531066 |
336 | L>V | No |
ClinGen gnomAD |
|
CA3610200 rs777056572 |
341 | K>E | No |
ClinGen ExAC gnomAD |
|
CA3610176 rs774991145 |
342 | V>A | No |
ClinGen ExAC gnomAD |
|
CA133285718 rs546254939 |
343 | E>D | No |
ClinGen gnomAD |
|
rs1326735906 CA362530512 |
344 | L>P | No |
ClinGen gnomAD |
|
TCGA novel | 345 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA3610175 rs771333096 |
345 | T>S | No |
ClinGen ExAC gnomAD |
|
rs749740849 CA3610174 |
346 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362530430 rs1417484918 |
349 | D>H | No |
ClinGen gnomAD |
|
CA362530434 rs1417484918 |
349 | D>N | No |
ClinGen gnomAD |
|
rs970295659 CA133285711 |
350 | T>K | No |
ClinGen Ensembl |
|
CA362530404 rs1361888137 |
350 | T>P | No |
ClinGen TOPMed |
|
CA3610171 rs746710943 |
351 | A>T | No |
ClinGen ExAC gnomAD |
|
rs1171272651 CA362530366 |
352 | N>K | No |
ClinGen gnomAD |
|
rs1183180447 CA362530360 |
353 | P>Q | No |
ClinGen gnomAD |
|
rs1298696444 CA362530345 |
354 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
rs758276553 CA3610169 |
354 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610168 rs750167421 |
355 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs531072907 CA133285696 |
356 | I>M | No |
ClinGen Ensembl |
|
CA3610167 rs371250731 |
356 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
CA133285694 rs138823350 |
357 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs138823350 CA3610166 |
357 | L>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1486671165 CA362530307 |
357 | L>R | No |
ClinGen gnomAD |
|
rs1249393900 CA362530301 |
358 | S>P | No |
ClinGen gnomAD |
|
rs1276419880 CA362530290 |
358 | S>Y | No |
ClinGen gnomAD |
|
CA362530247 rs1271757829 |
360 | D>E | No |
ClinGen gnomAD |
|
CA362530260 rs1339977184 |
360 | D>H | No |
ClinGen gnomAD |
|
rs367846710 CA3610160 |
362 | K>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs756967710 CA3610159 |
362 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362530175 rs254460 |
363 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
VAR_052126 rs254460 CA3610158 |
363 | G>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA362530163 rs1332921087 |
364 | V>M | No |
ClinGen gnomAD |
|
CA362530143 rs556494114 |
365 | R>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA362530135 rs774595436 |
365 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA3610156 rs774595436 |
365 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs556494114 CA3610157 |
365 | R>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA362530125 rs1170053041 |
366 | L>F | No |
ClinGen gnomAD |
|
rs1423217925 CA362530113 |
367 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs768191915 CA3610152 |
369 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362530065 rs768191915 |
369 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA362530070 rs773663334 |
369 | R>W | No |
ClinGen ExAC gnomAD |
|
CA362530054 rs1157742120 |
370 | A>D | No |
ClinGen TOPMed |
|
rs1352670541 CA362530061 |
370 | A>T | No |
ClinGen gnomAD |
|
CA362530044 rs1345113726 |
371 | Q>E | No |
ClinGen TOPMed |
|
CA362530037 rs746514946 |
371 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610151 rs746514946 |
371 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362530023 rs1322949722 |
372 | D>Y | No |
ClinGen TOPMed |
|
rs1196563461 CA362529977 |
375 | N>H | No |
ClinGen gnomAD |
|
rs1273443482 CA362529953 |
375 | N>K | No |
ClinGen gnomAD |
|
CA3610148 rs779810853 |
375 | N>T | No |
ClinGen ExAC gnomAD |
|
CA362529948 rs1234816540 |
376 | H>N | No |
ClinGen gnomAD |
|
rs202182023 CA3610147 |
376 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs202182023 CA362529943 |
376 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1442267695 CA362529894 |
378 | C>* | No |
ClinGen gnomAD |
|
CA3610145 rs778604025 |
379 | R>C | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 379 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA362529844 rs1301457875 |
380 | F>C | No |
ClinGen TOPMed |
|
COSM362433 rs1440664975 CA362529866 |
380 | F>L | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
COSM1595310 CA3610144 rs757067425 COSM1066915 |
381 | D>N | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA362529836 rs757067425 |
381 | D>Y | No |
ClinGen ExAC gnomAD |
|
CA133285646 rs373720464 |
382 | T>I | No |
ClinGen ESP TOPMed |
|
CA362529827 rs1399946878 |
382 | T>P | No |
ClinGen gnomAD |
|
CA133285641 rs376608746 |
384 | T>I | No |
ClinGen Ensembl |
|
rs376608746 CA133285643 |
384 | T>N | No |
ClinGen Ensembl |
|
CA362529778 rs749285913 |
385 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610142 rs185144112 |
385 | R>H | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
CA3610143 rs749285913 |
385 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs752706205 CA3610140 |
388 | A>E | No |
ClinGen ExAC gnomAD |
|
rs1470531483 CA362529737 |
388 | A>P | No |
ClinGen TOPMed gnomAD |
|
CA362529735 rs1470531483 |
388 | A>T | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 388 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1457255135 CA362529708 |
389 | S>F | No |
ClinGen gnomAD |
|
rs368735034 CA3610138 |
391 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA3610135 rs766754774 |
393 | S>F | No |
ClinGen ExAC gnomAD |
|
CA133285621 rs968044659 |
393 | S>T | No |
ClinGen TOPMed gnomAD |
|
CA133285612 rs879262053 |
394 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA362529618 rs1409462631 |
394 | S>T | No |
ClinGen gnomAD |
|
rs762319634 CA3610131 |
396 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762319634 CA3610132 |
396 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762319634 CA362529566 |
396 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs991138763 CA133285606 COSM88696 |
396 | R>W | ovary [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs1438993422 CA362529503 |
399 | W>* | No |
ClinGen TOPMed gnomAD |
|
rs771570796 CA3610129 |
399 | W>C | No |
ClinGen ExAC gnomAD |
|
rs1390044349 CA362529475 |
400 | E>D | No |
ClinGen TOPMed |
|
rs554493109 CA3610128 |
400 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
TCGA novel | 401 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs749092499 CA3610125 |
402 | E>K | No |
ClinGen ExAC gnomAD |
|
rs749092499 CA3610126 |
402 | E>Q | No |
ClinGen ExAC gnomAD |
|
CA362529431 rs1561644411 |
403 | V>E | No |
ClinGen Ensembl |
|
rs1219293639 CA362529401 |
405 | S>F | No |
ClinGen TOPMed gnomAD |
|
rs1439055928 CA362529380 |
406 | K>N | No |
ClinGen gnomAD |
|
rs756135753 CA3610123 |
407 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs781165142 CA3610122 |
408 | G>C | No |
ClinGen ExAC gnomAD |
|
CA362529349 rs1450468943 |
408 | G>D | No |
ClinGen gnomAD |
|
CA3610121 rs781165142 |
408 | G>R | No |
ClinGen ExAC gnomAD |
|
rs781165142 CA362529358 |
408 | G>S | No |
ClinGen ExAC gnomAD |
|
CA362529339 rs1429578196 |
409 | W>R | No |
ClinGen Ensembl |
|
rs1487358252 CA362529303 |
410 | A>V | No |
ClinGen gnomAD |
|
CA3610120 rs755039269 |
411 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610118 rs751781492 |
412 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs751781492 CA362529249 |
412 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362529234 rs1353650094 |
413 | V>G | No |
ClinGen gnomAD |
|
CA3610116 rs758818114 |
413 | V>M | No |
ClinGen ExAC gnomAD |
|
CA362529206 rs1221302005 |
415 | R>H | No |
ClinGen TOPMed gnomAD |
|
rs1365863072 CA362529195 |
416 | E>Q | No |
ClinGen gnomAD |
|
rs889682628 CA133285566 |
417 | S>G | No |
ClinGen TOPMed |
|
rs1431841215 CA362529143 |
417 | S>R | No |
ClinGen gnomAD |
|
rs1362661254 CA362529140 |
418 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA3610113 rs762257274 |
419 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 419 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA3610111 rs766983079 |
420 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs759053865 CA3610110 COSM24052 |
420 | R>Q | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA3610109 rs774215224 |
422 | G>S | No |
ClinGen ExAC gnomAD |
|
CA362529036 rs1186882613 |
423 | L>P | No |
ClinGen gnomAD |
|
rs1186882613 CA362529033 |
423 | L>R | No |
ClinGen gnomAD |
|
CA133285554 rs994584395 |
424 | T>M | No |
ClinGen TOPMed gnomAD |
|
rs1561644254 CA362529030 |
424 | T>P | No |
ClinGen Ensembl |
|
rs1215297814 CA362529010 |
425 | P>S | No |
ClinGen gnomAD |
|
rs866034388 CA133285549 |
428 | P>L | No |
ClinGen Ensembl |
|
rs769676294 CA3610105 |
429 | E>K | No |
ClinGen ExAC |
|
rs1281685562 CA362528909 |
430 | E>K | No |
ClinGen gnomAD |
|
CA3610103 rs781169912 |
434 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs768682055 CA3610102 |
435 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA133285542 rs752111156 |
435 | L>V | No |
ClinGen TOPMed gnomAD |
|
CA3610101 rs200165092 |
437 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs942925618 CA133285533 |
439 | G>C | No |
ClinGen TOPMed gnomAD |
|
rs891393446 CA133285530 |
439 | G>D | No |
ClinGen TOPMed gnomAD |
|
rs942925618 CA362528774 |
439 | G>S | No |
ClinGen TOPMed gnomAD |
|
rs750602919 CA3610098 |
440 | G>S | No |
ClinGen ExAC gnomAD |
|
CA362528715 rs1411666548 |
442 | Y>* | No |
ClinGen TOPMed |
|
TCGA novel | 443 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA362528686 rs1421025977 |
444 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA3610097 rs779272280 |
444 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs757616559 CA3610096 |
446 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs754340485 CA3610095 |
447 | S>N | No |
ClinGen ExAC gnomAD |
|
rs1179574580 CA362528634 |
447 | S>R | No |
ClinGen gnomAD |
|
rs916140401 CA362528628 |
448 | P>A | No |
ClinGen TOPMed |
|
rs1482588705 CA362528619 |
448 | P>L | No |
ClinGen gnomAD |
|
rs916140401 CA133285510 |
448 | P>S | No |
ClinGen TOPMed |
|
rs916140401 CA362528626 |
448 | P>T | No |
ClinGen TOPMed |
|
CA3610093 rs759027826 |
449 | E>D | No |
ClinGen ExAC gnomAD |
|
CA133285506 rs990829359 |
449 | E>G | No |
ClinGen Ensembl |
|
rs764659374 CA3610094 |
449 | E>K | No |
ClinGen ExAC gnomAD |
|
CA362528614 rs764659374 |
449 | E>Q | No |
ClinGen ExAC gnomAD |
|
CA3610090 rs762729364 |
450 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs61751566 CA3610091 |
450 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs772954194 CA362528576 |
451 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3610089 rs772954194 |
451 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA362528556 rs1378390014 |
452 | P>H | No |
ClinGen TOPMed gnomAD |
|
CA362528553 rs1378390014 |
452 | P>L | No |
ClinGen TOPMed gnomAD |
|
CA362528559 rs1394343219 |
452 | P>S | No |
ClinGen gnomAD |
|
rs1298610190 CA362528548 |
453 | L>V | No |
ClinGen gnomAD |
|
rs776487052 CA3610086 |
455 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 455 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA362528487 rs1169686352 |
456 | G>E | No |
ClinGen gnomAD |
|
rs532371393 CA133285489 |
456 | G>R | No |
ClinGen 1000Genomes TOPMed |
|
CA362528489 rs532371393 |
456 | G>W | No |
ClinGen 1000Genomes TOPMed |
|
rs770769065 CA362528436 |
459 | S>* | No |
ClinGen TOPMed gnomAD |
|
rs770769065 CA133285487 |
459 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA362528433 rs770769065 |
459 | S>W | No |
ClinGen TOPMed gnomAD |
|
CA362528419 rs1369813230 |
460 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA3610085 rs768650609 |
461 | V>M | No |
ClinGen ExAC gnomAD |
|
CA362528376 rs1459473401 |
463 | V>A | No |
ClinGen gnomAD |
|
CA362528382 rs1179751153 |
463 | V>L | No |
ClinGen gnomAD |
|
CA362528370 rs1198374758 |
464 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs990859898 CA133285479 |
465 | L>V | No |
ClinGen TOPMed |
|
CA3610081 rs145317232 |
466 | D>N | No |
ClinGen ESP ExAC gnomAD |
|
CA3610082 rs145317232 |
466 | D>Y | No |
ClinGen ESP ExAC gnomAD |
|
CA133285469 rs960884944 |
467 | L>R | No |
ClinGen TOPMed |
|
CA3610078 rs757628146 |
470 | G>R | No |
ClinGen ExAC gnomAD |
|
rs754219099 CA3610077 |
471 | A>D | No |
ClinGen ExAC gnomAD |
|
rs867194011 CA133285462 |
471 | A>S | No |
ClinGen Ensembl |
|
rs1441297441 CA362528222 |
473 | S>F | No |
ClinGen gnomAD |
|
rs1392464272 CA362528220 |
474 | F>I | No |
ClinGen gnomAD |
|
CA362528211 rs1291367692 |
474 | F>S | No |
ClinGen gnomAD |
|
rs1034957866 CA133285457 |
475 | Y>* | No |
ClinGen TOPMed |
|
rs1456983906 CA362528199 |
475 | Y>H | No |
ClinGen gnomAD |
|
rs1374971183 CA362528195 |
475 | Y>S | No |
ClinGen TOPMed |
|
CA3610076 rs201027432 |
476 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs753216591 CA3610074 |
478 | E>G | No |
ClinGen ExAC gnomAD |
|
rs1378981279 CA362528132 |
479 | D>N | No |
ClinGen TOPMed gnomAD |
|
rs1453746718 CA362528116 |
479 | D>V | No |
ClinGen gnomAD |
|
CA133285442 rs552988435 |
480 | M>L | No |
ClinGen Ensembl |
|
rs766012791 CA3610073 |
480 | M>T | No |
ClinGen ExAC gnomAD |
|
CA362528083 rs1269752401 |
481 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs762533864 CA3610072 |
481 | R>H | No |
ClinGen ExAC gnomAD |
|
rs141420106 CA3610070 |
483 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA362528052 rs141420106 |
483 | L>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA362528010 rs761311052 |
485 | T>A | No |
ClinGen ExAC gnomAD |
|
rs182296467 CA3610068 |
485 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA3610067 rs182296467 |
485 | T>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs761311052 CA3610069 |
485 | T>P | No |
ClinGen ExAC gnomAD |
|
rs760627175 CA3610066 |
486 | F>S | No |
ClinGen ExAC gnomAD |
|
CA362527974 rs1278951787 |
487 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
TCGA novel | 488 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA362527959 rs1298909002 |
488 | V>G | No |
ClinGen gnomAD |
|
rs367751286 CA3610064 |
488 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs889641065 CA133285419 |
489 | N>I | No |
ClinGen TOPMed gnomAD |
|
rs889641065 CA362527946 |
489 | N>S | No |
ClinGen TOPMed gnomAD |
|
CA3610063 rs745943027 |
491 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA362527845 rs1385191219 |
493 | R>C | No |
ClinGen TOPMed gnomAD |
|
rs1299555468 CA362527842 |
493 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA362527819 rs1359220955 |
494 | V>E | No |
ClinGen gnomAD |
|
rs1379799959 CA362527735 |
496 | P>L | No |
ClinGen TOPMed gnomAD |
|
CA362527729 rs1217959459 |
497 | L>F | No |
ClinGen gnomAD |
|
CA3610058 rs778232593 |
498 | F>L | No |
ClinGen ExAC gnomAD |
|
rs753637955 CA133285404 |
500 | V>A | No |
ClinGen Ensembl |
|
rs1487308736 CA362527609 |
502 | S>T | No |
ClinGen gnomAD |
|
rs142071484 CA3610056 |
503 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3610054 rs201909164 |
508 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs758052656 CA3610053 |
508 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA362527471 rs749963929 |
509 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
TCGA novel | 509 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs764580305 CA3610051 |
510 | W>R | No |
ClinGen ExAC gnomAD |
|
CA3610050 rs148602621 |
512 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
No associated diseases with Q9C029
5 regional properties for Q9C029
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | PDZ domain | 17 - 106 | IPR001478-1 |
domain | PDZ domain | 249 - 333 | IPR001478-2 |
domain | PDZ domain | 364 - 448 | IPR001478-3 |
domain | PDZ domain | 489 - 576 | IPR001478-4 |
domain | PDZ domain | 584 - 664 | IPR001478-5 |
Functions
Description | ||
---|---|---|
EC Number | 2.3.2.27 | Aminoacyltransferases |
Subcellular Localization |
|
|
PANTHER Family | ||
PANTHER Subfamily | ||
PANTHER Protein Class | ||
PANTHER Pathway Category | No pathway information available |
3 GO annotations of cellular component
Name | Definition |
---|---|
cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
Name | Definition |
---|---|
ubiquitin protein ligase activity | Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues. |
zinc ion binding | Binding to a zinc ion (Zn). |
1 GO annotations of biological process
Name | Definition |
---|---|
protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
49 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q5E9G4 | TRIM10 | Tripartite motif-containing protein 10 | Bos taurus (Bovine) | PR |
Q2T9Z0 | TRIM17 | E3 ubiquitin-protein ligase TRIM17 | Bos taurus (Bovine) | PR |
E1BJS7 | TRIM71 | E3 ubiquitin-protein ligase TRIM71 | Bos taurus (Bovine) | PR |
Q7YRV4 | TRIM21 | E3 ubiquitin-protein ligase TRIM21 | Bos taurus (Bovine) | PR |
Q1PRL4 | TRIM71 | E3 ubiquitin-protein ligase TRIM71 | Gallus gallus (Chicken) | PR |
Q7YR32 | TRIM10 | Tripartite motif-containing protein 10 | Pan troglodytes (Chimpanzee) | PR |
Q9BTV5 | FSD1 | Fibronectin type III and SPRY domain-containing protein 1 | Homo sapiens (Human) | PR |
Q9UJV3 | MID2 | Probable E3 ubiquitin-protein ligase MID2 | Homo sapiens (Human) | PR |
P29590 | PML | Protein PML | Homo sapiens (Human) | PR |
Q9NQ86 | TRIM36 | E3 ubiquitin-protein ligase TRIM36 | Homo sapiens (Human) | PR |
Q86UV6 | TRIM74 | Tripartite motif-containing protein 74 | Homo sapiens (Human) | PR |
Q2Q1W2 | TRIM71 | E3 ubiquitin-protein ligase TRIM71 | Homo sapiens (Human) | PR |
Q9BXM9 | FSD1L | FSD1-like protein | Homo sapiens (Human) | PR |
Q9H2S5 | RNF39 | RING finger protein 39 | Homo sapiens (Human) | PR |
Q86UV7 | TRIM73 | Tripartite motif-containing protein 73 | Homo sapiens (Human) | PR |
Q86XT4 | TRIM50 | E3 ubiquitin-protein ligase TRIM50 | Homo sapiens (Human) | PR |
Q6ZMU5 | TRIM72 | Tripartite motif-containing protein 72 | Homo sapiens (Human) | PR |
Q9UPQ4 | TRIM35 | E3 ubiquitin-protein ligase TRIM35 | Homo sapiens (Human) | PR |
Q9BZY9 | TRIM31 | E3 ubiquitin-protein ligase TRIM31 | Homo sapiens (Human) | PR |
O15553 | MEFV | Pyrin | Homo sapiens (Human) | SS |
A6NCK2 | TRIM43B | Tripartite motif-containing protein 43B | Homo sapiens (Human) | PR |
Q8N9V2 | TRIML1 | Probable E3 ubiquitin-protein ligase TRIML1 | Homo sapiens (Human) | PR |
P19474 | TRIM21 | E3 ubiquitin-protein ligase TRIM21 | Homo sapiens (Human) | PR |
Q14142 | TRIM14 | Tripartite motif-containing protein 14 | Homo sapiens (Human) | PR |
A6NK02 | TRIM75 | Tripartite motif-containing protein 75 | Homo sapiens (Human) | PR |
Q5EBN2 | TRIM61 | Putative tripartite motif-containing protein 61 | Homo sapiens (Human) | PR |
Q9WUH5 | Trim10 | Tripartite motif-containing protein 10 | Mus musculus (Mouse) | PR |
Q8BZT2 | Sh3rf2 | E3 ubiquitin-protein ligase SH3RF2 | Mus musculus (Mouse) | PR |
Q7TPM3 | Trim17 | E3 ubiquitin-protein ligase TRIM17 | Mus musculus (Mouse) | PR |
Q1XH17 | Trim72 | Tripartite motif-containing protein 72 | Mus musculus (Mouse) | PR |
Q60953 | Pml | Protein PML | Mus musculus (Mouse) | PR |
Q9JJ26 | Mefv | Pyrin | Mus musculus (Mouse) | SS |
Q99PQ1 | Trim12a | Tripartite motif-containing protein 12A | Mus musculus (Mouse) | PR |
Q61510 | Trim25 | E3 ubiquitin/ISG15 ligase TRIM25 | Mus musculus (Mouse) | PR |
Q810I2 | Trim50 | E3 ubiquitin-protein ligase TRIM50 | Mus musculus (Mouse) | PR |
Q1PSW8 | Trim71 | E3 ubiquitin-protein ligase TRIM71 | Mus musculus (Mouse) | PR |
Q3TL54 | Trim43a | Tripartite motif-containing protein 43A | Mus musculus (Mouse) | PR |
P86449 | Trim43c | Tripartite motif-containing protein 43C | Mus musculus (Mouse) | PR |
O77666 | TRIM26 | Tripartite motif-containing protein 26 | Sus scrofa (Pig) | PR |
O19085 | TRIM10 | Tripartite motif-containing protein 10 | Sus scrofa (Pig) | PR |
Q865W2 | TRIM50 | E3 ubiquitin-protein ligase TRIM50 | Sus scrofa (Pig) | PR |
Q920M2 | Rnf39 | RING finger protein 39 | Rattus norvegicus (Rat) | PR |
Q9JJ25 | Mefv | Pyrin | Rattus norvegicus (Rat) | SS |
A0JPQ4 | Trim72 | Tripartite motif-containing protein 72 | Rattus norvegicus (Rat) | PR |
Q810I1 | Trim50 | E3 ubiquitin-protein ligase TRIM50 | Rattus norvegicus (Rat) | PR |
D3ZVM4 | Trim71 | E3 ubiquitin-protein ligase TRIM71 | Rattus norvegicus (Rat) | PR |
F6QEU4 | trim71 | E3 ubiquitin-protein ligase TRIM71 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
Q640S6 | trim72 | Tripartite motif-containing protein 72 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
E7FAM5 | trim71 | E3 ubiquitin-protein ligase TRIM71 | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
10 | 20 | 30 | 40 | 50 | 60 |
MAAVGPRTGP | GTGAEALALA | AELQGEATCS | ICLELFREPV | SVECGHSFCR | ACIGRCWERP |
70 | 80 | 90 | 100 | 110 | 120 |
GAGSVGAATR | APPFPLPCPQ | CREPARPSQL | RPNRQLAAVA | TLLRRFSLPA | AAPGEHGSQA |
130 | 140 | 150 | 160 | 170 | 180 |
AAARAAAARC | GQHGEPFKLY | CQDDGRAICV | VCDRAREHRE | HAVLPLDEAV | QEAKELLESR |
190 | 200 | 210 | 220 | 230 | 240 |
LRVLKKELED | CEVFRSTEKK | ESKELLKQMA | AEQEKVGAEF | QALRAFLVEQ | EGRLLGRLEE |
250 | 260 | 270 | 280 | 290 | 300 |
LSREVAQKQN | ENLAQLGVEI | TQLSKLSSQI | QETAQKPDLD | FLQEFKSTLS | RCSNVPGPKP |
310 | 320 | 330 | 340 | 350 | 360 |
TTVSSEMKNK | VWNVSLKTFV | LKGMLKKFKE | DLRGELEKEE | KVELTLDPDT | ANPRLILSLD |
370 | 380 | 390 | 400 | 410 | 420 |
LKGVRLGERA | QDLPNHPCRF | DTNTRVLASC | GFSSGRHHWE | VEVGSKDGWA | FGVARESVRR |
430 | 440 | 450 | 460 | 470 | 480 |
KGLTPFTPEE | GVWALQLNGG | QYWAVTSPER | SPLSCGHLSR | VRVALDLEVG | AVSFYAVEDM |
490 | 500 | 510 | |||
RHLYTFRVNF | QERVFPLFSV | CSTGTYLRIW | P |