Q99549
Gene name |
MPHOSPH8 |
Protein name |
M-phase phosphoprotein 8 |
Names |
Two hybrid-associated protein 3 with RanBPM, Twa3 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:54737 |
EC number |
|
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

7 structures for Q99549
666 variants for Q99549
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
CA6901362 rs548773739 |
2 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1409710553 CA387665174 |
2 | E>K | No |
ClinGen gnomAD |
|
rs566133288 CA387665182 |
3 | Q>* | No |
ClinGen ExAC gnomAD |
|
rs566133288 CA6901363 |
3 | Q>E | No |
ClinGen ExAC gnomAD |
|
CA387665188 rs1394893273 |
4 | V>I | No |
ClinGen gnomAD |
|
CA387665194 rs1443066709 |
5 | A>T | No |
ClinGen gnomAD |
|
rs749787960 CA6901364 |
5 | A>V | No |
ClinGen ExAC gnomAD |
|
CA387665210 rs1238429527 |
7 | G>E | No |
ClinGen TOPMed gnomAD |
|
rs1238429527 CA387665212 |
7 | G>V | No |
ClinGen TOPMed gnomAD |
|
rs1280154137 CA387665214 |
8 | A>P | No |
ClinGen gnomAD |
|
CA387665218 rs1353140785 |
8 | A>V | No |
ClinGen gnomAD |
|
rs1289671870 CA387665219 |
9 | R>G | No |
ClinGen gnomAD |
|
TCGA novel | 9 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387665226 rs1364480710 |
10 | V>M | No |
ClinGen TOPMed |
|
rs763545081 CA246719071 |
11 | T>A | No |
ClinGen gnomAD |
|
CA387665236 rs1216156691 |
11 | T>I | No |
ClinGen TOPMed gnomAD |
|
rs146735121 CA6901366 |
12 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs865869170 CA246719072 |
12 | A>T | No |
ClinGen Ensembl |
|
rs146735121 CA246719074 |
12 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs772089186 CA6901368 |
14 | P>T | No |
ClinGen ExAC gnomAD |
|
CA246719092 rs967712386 CA387665251 |
15 | V>L | No |
ClinGen TOPMed |
|
rs967712386 CA387665252 |
15 | V>M | No |
ClinGen TOPMed |
|
CA6901369 rs773464705 |
16 | S>L | No |
ClinGen ExAC gnomAD |
|
rs1445904199 CA387665271 |
18 | A>G | No |
ClinGen gnomAD |
|
rs1462814716 CA387665267 |
18 | A>T | No |
ClinGen gnomAD |
|
rs775360707 CA6901372 |
20 | S>I | No |
ClinGen ExAC |
|
TCGA novel | 20 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs762856981 CA6901373 |
20 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs764072513 CA387665287 |
21 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs764072513 CA6901374 |
21 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs112488302 CA246719102 |
22 | E>G | No |
ClinGen Ensembl |
|
rs774185324 CA6901375 |
23 | E>D | No |
ClinGen ExAC gnomAD |
|
CA387665307 rs1593461524 |
24 | L>V | No |
ClinGen Ensembl |
|
rs139734802 CA6901376 |
25 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA387665318 rs1292895559 |
26 | E>K | No |
ClinGen gnomAD |
|
CA387665322 rs1335997647 |
26 | E>V | No |
ClinGen TOPMed gnomAD |
|
rs1057088 CA246719111 |
27 | V>D | No |
ClinGen Ensembl |
|
rs1235532323 CA387665326 |
27 | V>I | No |
ClinGen gnomAD |
|
TCGA novel | 29 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6901379 rs750073057 |
30 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs766984872 CA6901378 |
30 | G>R | No |
ClinGen ExAC gnomAD |
|
CA6901380 rs755828085 |
31 | V>D | No |
ClinGen ExAC gnomAD |
|
CA246719118 rs1050934661 |
31 | V>I | No |
ClinGen Ensembl |
|
CA387665365 rs1440173956 |
33 | V>A | No |
ClinGen gnomAD |
|
CA387665371 rs1593461580 |
34 | V>G | No |
ClinGen Ensembl |
|
CA6901381 rs766021897 |
34 | V>M | No |
ClinGen ExAC gnomAD |
|
rs1201885734 CA387665376 |
35 | G>V | No |
ClinGen TOPMed |
|
CA387665380 rs1246237127 |
36 | E>* | No |
ClinGen TOPMed |
|
rs1246237127 CA387665379 |
36 | E>Q | No |
ClinGen TOPMed |
|
CA387665383 rs1309847573 |
36 | E>V | No |
ClinGen TOPMed |
|
CA387665390 rs1256736910 |
37 | D>G | No |
ClinGen TOPMed |
|
rs1593461612 CA387665406 |
39 | D>A | No |
ClinGen Ensembl |
|
rs748655472 CA6901385 |
42 | A>E | No |
ClinGen ExAC |
|
CA6901384 rs779448685 |
42 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA387665426 rs1169561090 |
43 | R>G | No |
ClinGen gnomAD |
|
rs1215953528 CA387665428 |
43 | R>K | No |
ClinGen gnomAD |
|
CA6901386 rs758491809 |
44 | G>E | No |
ClinGen ExAC gnomAD |
|
CA387665437 rs758491809 |
44 | G>V | No |
ClinGen ExAC gnomAD |
|
rs1412826606 CA387665449 |
46 | E>V | No |
ClinGen gnomAD |
|
CA246719150 rs1036414214 |
47 | A>T | No |
ClinGen gnomAD |
|
rs899291580 CA246719155 |
49 | G>D | No |
ClinGen TOPMed |
|
rs1276732788 CA387665478 |
51 | S>G | No |
ClinGen gnomAD |
|
CA387665480 rs1276732788 |
51 | S>R | No |
ClinGen gnomAD |
|
CA246719176 rs759629606 |
54 | D>A | No |
ClinGen TOPMed gnomAD |
|
CA246719178 rs759629606 |
54 | D>G | No |
ClinGen TOPMed gnomAD |
|
rs759629606 CA387665505 |
54 | D>V | No |
ClinGen TOPMed gnomAD |
|
CA387665511 rs1329264048 |
55 | G>A | No |
ClinGen TOPMed |
|
CA387665510 rs1329264048 |
55 | G>E | No |
ClinGen TOPMed |
|
CA6901389 rs752612246 |
55 | G>R | No |
ClinGen Ensembl |
|
CA387665515 rs1343406543 |
56 | E>* | No |
ClinGen gnomAD |
|
CA6901392 rs777013902 |
57 | D>G | No |
ClinGen ExAC gnomAD |
|
CA387665556 rs1262269622 |
62 | E>K | No |
ClinGen gnomAD |
|
rs905433183 CA246719224 |
63 | K>R | No |
ClinGen Ensembl |
|
CA6901399 rs760187859 |
67 | M>I | No |
ClinGen ExAC gnomAD |
|
rs554482845 CA6901398 |
67 | M>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1253252336 CA387665592 |
67 | M>T | No |
ClinGen gnomAD |
|
rs554482845 CA246719235 |
67 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1420427036 CA387665604 |
68 | K>N | No |
ClinGen gnomAD |
|
CA387665610 rs1436859357 |
69 | T>I | No |
ClinGen TOPMed gnomAD |
|
CA387665613 rs1384769743 |
70 | E>* | No |
ClinGen gnomAD |
|
rs755317846 CA6901402 |
71 | G>A | No |
ClinGen ExAC gnomAD |
|
CA387665620 rs753531457 CA6901401 |
71 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1166026873 CA387433204 |
72 | G>C | No |
ClinGen gnomAD |
|
rs931213994 CA246393313 |
73 | K>T | No |
ClinGen TOPMed gnomAD |
|
CA6901432 rs142067434 |
74 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6901433 rs777668517 |
75 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs200202398 CA6901434 |
77 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6901435 rs770427196 |
78 | V>I | No |
ClinGen ExAC gnomAD |
|
rs776052318 CA6901436 |
79 | R>C | No |
ClinGen ExAC gnomAD |
|
CA387433247 rs1160996250 |
79 | R>H | No |
ClinGen TOPMed |
|
rs776052318 CA387433245 |
79 | R>S | No |
ClinGen ExAC gnomAD |
|
rs769283060 CA6901438 |
82 | G>S | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 84 | T>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs377735940 CA6901440 |
85 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
CA387433297 rs1480991485 |
86 | D>E | No |
ClinGen gnomAD |
|
TCGA novel | 87 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1013696243 CA246393326 |
89 | T>S | No |
ClinGen Ensembl |
|
CA387433377 rs1474967773 |
93 | E>D | No |
ClinGen gnomAD |
|
CA6901443 rs762476495 |
93 | E>K | No |
ClinGen ExAC gnomAD |
|
CA387433497 rs1476679890 |
103 | L>F | No |
ClinGen TOPMed |
|
TCGA novel | 107 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387433601 rs1420426396 |
109 | K>R | No |
ClinGen gnomAD |
|
CA387433631 rs1170335686 |
111 | A>S | No |
ClinGen gnomAD |
|
rs1354671250 CA387433674 |
113 | N>K | No |
ClinGen gnomAD |
|
CA387433710 rs1474033505 |
115 | A>V | No |
ClinGen gnomAD |
|
rs750468943 CA6901445 |
119 | R>G | No |
ClinGen ExAC gnomAD |
|
CA387433785 rs1414975941 |
119 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs766470217 CA6901447 |
123 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs1192283066 CA387435421 |
125 | L>V | No |
ClinGen gnomAD |
|
rs755564389 CA6901476 |
130 | D>N | No |
ClinGen ExAC gnomAD |
|
CA387435513 rs1272254844 |
131 | I>R | No |
ClinGen TOPMed |
|
rs1405356339 CA387435528 |
133 | E>K | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 133 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387435545 rs149912855 |
134 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 134 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6901477 rs149912855 |
134 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6901481 rs774165997 |
139 | D>N | No |
ClinGen ExAC gnomAD |
|
CA6901480 rs774165997 |
139 | D>Y | No |
ClinGen ExAC gnomAD |
|
rs1213195030 CA387435618 |
140 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs772602122 CA6901482 |
140 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1335210631 CA387435631 |
141 | Q>E | No |
ClinGen TOPMed |
|
CA6901483 rs773582304 |
143 | E>K | No |
ClinGen ExAC gnomAD |
|
rs866471500 CA246395058 |
144 | T>K | No |
ClinGen TOPMed |
|
rs144940100 CA6901484 |
145 | K>E | No |
ClinGen ESP |
|
rs1305647737 CA387435711 |
147 | D>N | No |
ClinGen gnomAD |
|
CA6901486 rs550375794 |
148 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs771349676 CA6901487 |
148 | T>I | No |
ClinGen ExAC gnomAD |
|
CA246395061 rs1057093 |
149 | S>F | No |
ClinGen gnomAD |
|
rs1057093 CA387435728 |
149 | S>Y | No |
ClinGen gnomAD |
|
CA6901488 rs776719535 |
150 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs371181258 CA246395065 |
150 | P>T | No |
ClinGen Ensembl |
|
CA6901489 rs759635695 |
151 | K>N | No |
ClinGen ExAC gnomAD |
|
rs939959852 CA246395078 |
152 | K>E | No |
ClinGen TOPMed gnomAD |
|
rs765405363 CA6901490 |
154 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs765405363 CA387435793 |
154 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 157 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs752958572 CA6901491 |
157 | L>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1230632892 CA387435882 |
160 | R>I | No |
ClinGen gnomAD |
|
rs1160887290 COSM3936251 CA387435914 |
162 | E>D | oesophagus [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs761571528 CA6901492 |
162 | E>G | No |
ClinGen ExAC gnomAD |
|
CA387435960 rs1468185694 |
166 | D>N | No |
ClinGen TOPMed |
|
rs767401598 CA6901493 |
167 | D>V | No |
ClinGen ExAC gnomAD |
|
CA387435997 rs1188178566 |
168 | L>P | No |
ClinGen TOPMed |
|
CA387435993 rs1231770198 |
168 | L>V | No |
ClinGen TOPMed |
|
TCGA novel | 169 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1443999375 CA387436007 |
169 | K>R | No |
ClinGen TOPMed |
|
rs1270292943 CA387436090 |
175 | A>S | No |
ClinGen TOPMed |
|
rs377501756 CA6901497 |
176 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1485305630 CA387436122 |
177 | K>N | No |
ClinGen gnomAD |
|
rs1050023244 CA246395113 |
177 | K>R | No |
ClinGen TOPMed |
|
CA387436158 rs1325646466 |
180 | D>G | No |
ClinGen gnomAD |
|
CA387436167 rs1334034233 |
181 | K>E | No |
ClinGen gnomAD |
|
CA387436196 rs1280352907 |
184 | P>L | No |
ClinGen TOPMed gnomAD |
|
CA387436195 rs1280352907 |
184 | P>R | No |
ClinGen TOPMed gnomAD |
|
rs1184563688 CA387436193 |
184 | P>S | No |
ClinGen gnomAD |
|
rs1336629181 CA387436204 |
185 | D>E | No |
ClinGen TOPMed |
|
rs1375714556 CA387436201 |
185 | D>G | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 186 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387436223 rs1231857631 |
188 | S>N | No |
ClinGen gnomAD |
|
CA6901498 rs753336174 |
189 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1216067377 CA387436335 |
197 | L>F | No |
ClinGen gnomAD |
|
CA6901499 rs754563540 |
197 | L>V | No |
ClinGen ExAC gnomAD |
|
rs1421332338 CA387436382 |
201 | K>E | No |
ClinGen gnomAD |
|
CA387436390 rs1182168394 |
201 | K>N | No |
ClinGen TOPMed gnomAD |
|
rs150849833 CA6901500 |
201 | K>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6901501 rs747870349 |
202 | R>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6901502 rs747870349 |
202 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1473989482 CA387436426 |
204 | S>C | No |
ClinGen gnomAD |
|
rs1172981316 CA387436437 |
205 | E>G | No |
ClinGen gnomAD |
|
CA387436449 rs1163400138 |
206 | A>T | No |
ClinGen TOPMed |
|
CA387436496 rs1186987225 |
209 | E>* | No |
ClinGen gnomAD |
|
CA387436510 rs1418257101 |
210 | L>I | No |
ClinGen gnomAD |
|
rs778136556 CA6901504 |
213 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA387436571 rs1394504936 |
214 | K>E | No |
ClinGen gnomAD |
|
TCGA novel | 214 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 216 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387436647 rs1446710840 |
219 | D>E | No |
ClinGen TOPMed |
|
rs551537043 CA6901506 |
219 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
TCGA novel | 219 | D>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387436661 rs1356483305 |
220 | E>D | No |
ClinGen gnomAD |
|
rs145920125 CA6901507 |
220 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6901509 rs769913849 |
222 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs867446648 CA246395147 |
222 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
rs775673965 CA6901510 |
223 | E>K | No |
ClinGen ExAC gnomAD |
|
CA608983577 rs1195888429 |
225 | K>Y | No |
ClinGen gnomAD |
|
TCGA novel | 226 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs866202479 CA246395154 |
226 | E>D | No |
ClinGen Ensembl |
|
rs866907025 CA246395169 |
227 | L>* | No |
ClinGen Ensembl |
|
CA387436813 rs1258033067 |
232 | K>R | No |
ClinGen gnomAD |
|
CA387436812 rs1258033067 |
232 | K>T | No |
ClinGen gnomAD |
|
rs1190669788 CA387436822 |
233 | G>A | No |
ClinGen gnomAD |
|
rs750170951 CA6901513 |
234 | E>K | No |
ClinGen ExAC gnomAD |
|
rs1428845339 CA387436834 |
235 | I>T | No |
ClinGen gnomAD |
|
TCGA novel | 237 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387436859 rs1430454096 |
239 | K>Q | No |
ClinGen TOPMed |
|
CA6901516 rs766299587 |
240 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6901515 rs766299587 |
240 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1312490204 CA387436872 |
241 | K>E | No |
ClinGen gnomAD |
|
TCGA novel | 244 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 245 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6901519 rs778635541 |
245 | D>N | No |
ClinGen ExAC gnomAD |
|
rs1406637624 CA387436911 |
246 | P>L | No |
ClinGen TOPMed |
|
TCGA novel | 246 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387436913 rs1316609780 |
247 | K>Q | No |
ClinGen TOPMed gnomAD |
|
rs138867095 CA6901520 |
247 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1228744310 CA387436928 |
249 | N>H | No |
ClinGen gnomAD |
|
CA246395221 rs199970108 |
252 | T>K | No |
ClinGen Ensembl |
|
TCGA novel | 255 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 255 | E>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387436981 rs1565935512 |
256 | K>E | No |
ClinGen Ensembl |
|
CA6901524 rs747363130 |
257 | F>L | No |
ClinGen ExAC gnomAD |
|
rs373405714 CA6901523 |
257 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6901525 rs771243212 |
258 | V>A | No |
ClinGen ExAC gnomAD |
|
rs1260725114 CA387437004 |
259 | E>D | No |
ClinGen gnomAD |
|
CA6901527 rs746430788 |
259 | E>K | No |
ClinGen ExAC gnomAD |
|
rs138933311 CA6901528 |
260 | S>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA387437015 rs1195207331 |
261 | Q>R | No |
ClinGen gnomAD |
|
rs983812411 CA246395255 |
264 | S>P | No |
ClinGen TOPMed |
|
TCGA novel | 264 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387437039 rs1489886889 |
265 | E>Q | No |
ClinGen TOPMed |
|
rs749379197 CA6901530 |
267 | S>G | No |
ClinGen ExAC gnomAD |
|
CA6901531 rs768873811 |
267 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs774467966 CA6901532 |
267 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA387437062 rs1345019767 |
268 | V>A | No |
ClinGen TOPMed |
|
CA387437064 rs1467731684 |
269 | L>V | No |
ClinGen gnomAD |
|
TCGA novel | 271 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6901534 rs370459342 |
271 | D>G | No |
ClinGen ESP ExAC gnomAD |
|
CA6901533 rs556319750 |
271 | D>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
TCGA novel | 273 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6901535 rs776707000 |
273 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs759481103 CA6901538 |
274 | F>C | No |
ClinGen ExAC gnomAD |
|
rs1303436998 CA387437115 |
277 | D>N | No |
ClinGen gnomAD |
|
CA387437127 rs1313617739 |
278 | D>G | No |
ClinGen gnomAD |
|
rs757881700 CA6901541 |
279 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6901540 rs752206706 |
279 | S>T | No |
ClinGen ExAC gnomAD |
|
rs1351118193 CA387437144 |
280 | E>D | No |
ClinGen gnomAD |
|
CA387437145 rs1210591406 |
281 | G>W | No |
ClinGen gnomAD |
|
rs781600714 CA6901545 |
285 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs756552251 CA6901547 |
286 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs780556723 CA6901548 |
287 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs776701900 CA6901550 |
289 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1161752271 CA387437203 |
289 | E>G | No |
ClinGen TOPMed gnomAD |
|
rs1326040829 CA387437231 |
293 | T>A | No |
ClinGen TOPMed gnomAD |
|
rs748375206 CA6901552 |
294 | K>E | No |
ClinGen ExAC gnomAD |
|
rs772345374 CA6901553 |
294 | K>R | No |
ClinGen ExAC gnomAD |
|
rs776512048 CA6901554 |
295 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1425548564 CA387437253 |
296 | A>V | No |
ClinGen TOPMed |
|
rs1230021398 CA387437256 |
297 | R>K | No |
ClinGen gnomAD |
|
rs552475791 CA246395335 |
298 | E>G | No |
ClinGen Ensembl |
|
TCGA novel | 300 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 300 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6901558 rs376037584 |
302 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs985338371 CA246395345 |
303 | D>V | No |
ClinGen TOPMed gnomAD |
|
rs763572619 CA6901560 |
305 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6901561 rs557975926 |
306 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
TCGA novel | 307 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6901563 rs767167222 |
308 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA387437337 rs1184824745 |
309 | G>D | No |
ClinGen gnomAD |
|
CA387437368 rs1224969523 |
313 | P>L | No |
ClinGen TOPMed |
|
rs946800489 CA246395371 |
313 | P>S | No |
ClinGen TOPMed |
|
CA6901565 rs756501460 |
314 | L>I | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 315 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387437377 rs1351179570 |
315 | D>G | No |
ClinGen TOPMed gnomAD |
|
CA6901568 rs200779752 |
318 | M>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA6901567 rs141397171 |
318 | M>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1396799744 CA387437420 |
319 | S>N | No |
ClinGen gnomAD |
|
rs143598219 CA246395381 |
320 | A>G | No |
ClinGen ESP ExAC |
|
CA387437428 rs1411232432 |
320 | A>T | No |
ClinGen gnomAD |
|
rs143598219 CA6901569 |
320 | A>V | No |
ClinGen ESP ExAC |
|
CA6901571 rs772372362 |
321 | E>D | No |
ClinGen ExAC gnomAD |
|
CA6901570 rs148094292 |
321 | E>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6901574 rs150644808 COSM945765 |
325 | D>N | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
rs138850698 CA6901577 |
326 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs138850698 CA6901576 |
326 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6901578 rs528849658 |
328 | G>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA6901579 rs761404583 |
329 | R>G | No |
ClinGen ExAC |
|
CA6901580 rs767112361 |
330 | R>G | No |
ClinGen ExAC gnomAD |
|
CA387438550 rs1255917828 |
330 | R>K | No |
ClinGen TOPMed gnomAD |
|
rs1485545631 CA387438567 |
331 | K>E | No |
ClinGen gnomAD |
|
rs1182740802 CA387438572 |
331 | K>R | No |
ClinGen gnomAD |
|
rs761005097 CA6901583 |
335 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6901584 rs766787009 |
335 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA387438679 rs1310686224 |
336 | R>K | No |
ClinGen gnomAD |
|
CA387438760 rs1248442612 |
339 | E>G | No |
ClinGen TOPMed |
|
rs1161604732 CA387438823 |
341 | T>A | No |
ClinGen TOPMed gnomAD |
|
CA6901587 rs779498017 |
341 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs758591755 CA6901589 |
342 | R>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA6901590 rs778122908 |
343 | E>K | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 347 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6901591 rs747296725 |
348 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1440703265 CA387439017 |
349 | N>D | No |
ClinGen TOPMed gnomAD |
|
rs201016069 CA6901592 |
350 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1485202118 CA387439125 |
352 | A>D | No |
ClinGen gnomAD |
|
rs146349999 CA6901594 |
352 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1186422883 CA387439416 |
364 | R>S | No |
ClinGen gnomAD |
|
rs1450790733 CA387439433 |
365 | N>S | No |
ClinGen gnomAD |
|
CA387439429 rs1248172729 |
365 | N>Y | No |
ClinGen gnomAD |
|
CA246395502 rs139681000 |
369 | S>T | No |
ClinGen ESP |
|
TCGA novel | 372 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1400316485 CA387439676 |
376 | E>D | No |
ClinGen Ensembl |
|
rs774372548 CA6901598 |
380 | P>L | No |
ClinGen ExAC gnomAD |
|
CA387439744 rs1450233120 |
380 | P>S | No |
ClinGen TOPMed |
|
rs1405032676 CA387439752 COSM162550 |
381 | V>I | breast [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs761196569 CA6901599 |
382 | S>C | No |
ClinGen ExAC gnomAD |
|
CA6901601 rs772836023 |
383 | A>D | No |
ClinGen ExAC gnomAD |
|
rs566681314 CA6901600 |
383 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA6901603 rs368354077 |
384 | Q>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs368354077 CA6901602 |
384 | Q>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
COSM1365696 rs1437386376 CA387439858 |
385 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
CA6901605 rs549234655 |
387 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA6901606 rs142808828 |
389 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs191299359 CA6901608 |
389 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA6901607 rs142808828 |
389 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs374601795 CA387439963 |
390 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6901611 rs757494047 CA387440023 |
393 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA387440030 rs757494047 |
393 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6901614 rs754838176 |
394 | E>G | No |
ClinGen ExAC gnomAD |
|
CA6901613 rs748992567 |
394 | E>Q | No |
ClinGen ExAC gnomAD |
|
CA246395546 CA6901616 rs144379781 |
395 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs183665467 CA6901619 |
401 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA387440216 rs1159548036 |
401 | T>M | No |
ClinGen TOPMed gnomAD |
|
rs1288481895 CA387440224 |
402 | D>N | No |
ClinGen TOPMed |
|
rs759798225 CA6901622 |
405 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6901623 rs765695075 |
405 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs775860987 CA6901624 |
406 | E>K | No |
ClinGen ExAC gnomAD |
|
rs458210 CA6901641 |
410 | T>A | No |
ClinGen ESP ExAC gnomAD |
|
CA246395912 rs892390976 |
410 | T>I | No |
ClinGen Ensembl |
|
CA246395906 rs458210 |
410 | T>P | No |
ClinGen ESP ExAC gnomAD |
|
CA387440495 rs1409001743 |
411 | K>* | No |
ClinGen gnomAD |
|
rs775943152 CA6901643 |
412 | R>I | No |
ClinGen ExAC gnomAD |
|
CA6901642 rs775943152 |
412 | R>K | No |
ClinGen ExAC gnomAD |
|
rs1436907641 CA387440532 |
413 | N>S | No |
ClinGen gnomAD |
|
rs1205405332 CA387440542 |
414 | E>K | No |
ClinGen gnomAD |
|
CA246395920 rs1009378174 |
415 | S>C | No |
ClinGen Ensembl |
|
CA387440575 rs1373941389 |
416 | K>E | No |
ClinGen TOPMed |
|
rs1170718082 CA387440584 |
416 | K>R | No |
ClinGen TOPMed |
|
CA6901644 rs764652961 |
419 | Y>F | No |
ClinGen ExAC gnomAD |
|
CA387440640 rs1484565739 |
419 | Y>H | No |
ClinGen gnomAD |
|
CA6901645 rs372838397 |
420 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1473713219 CA387440661 |
420 | Q>R | No |
ClinGen gnomAD |
|
rs1165112292 CA387440693 |
422 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
TCGA novel | 422 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA246395930 rs368278971 |
423 | H>R | No |
ClinGen Ensembl |
|
rs761957511 CA6901646 |
423 | H>Y | No |
ClinGen ExAC gnomAD |
|
rs767693564 CA6901647 |
424 | D>N | No |
ClinGen ExAC gnomAD |
|
rs1372566210 CA387440745 |
425 | S>C | No |
ClinGen TOPMed gnomAD |
|
CA387440747 rs1372566210 |
425 | S>F | No |
ClinGen TOPMed gnomAD |
|
CA387440736 rs1308854813 |
425 | S>T | No |
ClinGen gnomAD |
|
CA387440788 rs1413333092 |
428 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs371703351 CA246395964 |
432 | R>S | No |
ClinGen ESP TOPMed |
|
rs1490360542 CA387440897 |
434 | E>V | No |
ClinGen TOPMed |
|
CA387440954 rs750606222 |
437 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA246395966 rs750606222 |
437 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6901648 rs750606222 |
437 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1022086863 CA246395970 |
438 | L>* | No |
ClinGen Ensembl |
|
CA387440971 rs1488041688 |
438 | L>F | No |
ClinGen TOPMed |
|
CA246396691 rs992368680 |
440 | T>I | No |
ClinGen Ensembl |
|
rs772460610 CA6901671 |
442 | K>R | No |
ClinGen ExAC gnomAD |
|
rs773283220 CA387441994 |
443 | E>D | No |
ClinGen ExAC gnomAD |
|
rs760701331 CA6901673 |
444 | I>V | No |
ClinGen ExAC gnomAD |
|
CA246396706 rs1020633326 |
447 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs1467905698 CA387442085 |
449 | D>Y | No |
ClinGen gnomAD |
|
TCGA novel | 450 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387442109 rs1233071466 |
451 | F>L | No |
ClinGen TOPMed |
|
rs1318047055 CA387442219 |
456 | E>G | No |
ClinGen TOPMed |
|
TCGA novel | 457 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs754108369 CA6901675 |
458 | K>E | No |
ClinGen ExAC gnomAD |
|
rs762723818 CA6901676 |
459 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762723818 CA6901677 |
459 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6901679 rs757163839 |
460 | D>E | No |
ClinGen ExAC gnomAD |
|
CA387442311 rs75390100 |
460 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs75390100 CA6901678 |
460 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1385936776 CA387442354 |
461 | V>G | No |
ClinGen gnomAD |
|
rs1003219793 CA246396740 |
464 | N>D | No |
ClinGen TOPMed gnomAD |
|
rs781017378 CA6901680 |
464 | N>I | No |
ClinGen ExAC gnomAD |
|
rs1003219793 CA387442411 |
464 | N>Y | No |
ClinGen TOPMed gnomAD |
|
rs532851739 CA6901682 |
466 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs749905392 CA6901681 |
466 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6901683 rs779826863 |
467 | K>E | No |
ClinGen ExAC gnomAD |
|
CA6901684 rs749003341 |
468 | R>T | No |
ClinGen ExAC gnomAD |
|
CA387442585 rs1270161032 |
471 | I>T | No |
ClinGen gnomAD |
|
CA246396756 rs546918293 |
472 | P>A | No |
ClinGen Ensembl |
|
rs1487546219 CA387442632 |
473 | L>R | No |
ClinGen gnomAD |
|
rs779353316 CA6901686 |
474 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs779353316 CA387442641 |
474 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA246396759 rs958994285 |
476 | K>E | No |
ClinGen TOPMed |
|
rs748473391 CA6901687 |
477 | T>I | No |
ClinGen ExAC gnomAD |
|
CA246396767 rs200043793 |
478 | I>T | No |
ClinGen 1000Genomes |
|
CA246396763 rs973042448 |
478 | I>V | No |
ClinGen TOPMed |
|
rs772580100 CA6901688 |
479 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs760788220 CA6901690 |
480 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA387442774 rs1406556911 |
481 | H>P | No |
ClinGen Ensembl |
|
CA6901691 rs201719876 |
482 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs911691980 CA246396780 |
483 | T>S | No |
ClinGen TOPMed gnomAD |
|
rs142493332 CA6901693 |
484 | K>E | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
rs1456976671 CA387442825 |
484 | K>T | No |
ClinGen gnomAD |
|
rs765462844 CA6901695 |
488 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs1389288276 CA387442906 |
488 | Q>R | No |
ClinGen gnomAD |
|
CA246396822 rs1039102922 |
489 | S>* | No |
ClinGen TOPMed |
|
CA387442914 rs1233482528 |
489 | S>T | No |
ClinGen gnomAD |
|
CA246396841 rs921930666 |
492 | E>G | No |
ClinGen TOPMed gnomAD |
|
rs761547924 CA6901697 |
492 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 495 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs767454849 CA6901699 |
496 | T>P | No |
ClinGen ExAC gnomAD |
|
CA6901701 rs147594834 |
499 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 499 | E>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs746077842 CA6901702 |
500 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1417643653 CA387443096 |
501 | D>G | No |
ClinGen TOPMed |
|
rs201074245 CA246396868 |
501 | D>Y | No |
ClinGen 1000Genomes |
|
CA6901704 rs754618545 |
502 | T>A | No |
ClinGen ExAC gnomAD |
|
rs776381701 CA246396879 |
502 | T>I | No |
ClinGen Ensembl |
|
rs778729583 CA6901705 |
504 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA387443115 rs1593476007 |
504 | A>V | No |
ClinGen Ensembl |
|
CA387443130 rs1412293129 |
506 | I>T | No |
ClinGen gnomAD |
|
CA387443133 rs1423701145 |
507 | A>T | No |
ClinGen gnomAD |
|
rs748515492 CA6901706 |
509 | E>D | No |
ClinGen ExAC gnomAD |
|
rs1366916552 CA387443176 |
512 | Q>P | No |
ClinGen TOPMed |
|
CA387443218 rs1593476037 |
514 | V>G | No |
ClinGen Ensembl |
|
CA387443240 rs1593476054 |
516 | D>N | No |
ClinGen Ensembl |
|
rs1036884651 CA246396895 |
517 | S>G | No |
ClinGen gnomAD |
|
rs1167567682 CA387443271 |
517 | S>N | No |
ClinGen TOPMed gnomAD |
|
CA6901708 rs778330655 |
518 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs374639933 CA6901709 |
521 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA387443336 rs1291123958 |
521 | A>V | No |
ClinGen TOPMed |
|
CA6901713 rs147834818 |
523 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs745974518 CA6901712 |
523 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs140273915 CA6901736 |
526 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 527 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs145797698 CA6901737 |
528 | R>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA387445363 rs145797698 |
528 | R>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1386398253 CA387445380 |
529 | Q>R | No |
ClinGen gnomAD |
|
CA387445424 rs1320029695 |
531 | I>M | No |
ClinGen gnomAD |
|
CA387445427 rs1389451700 |
532 | L>V | No |
ClinGen gnomAD |
|
rs776759760 CA6901738 |
533 | S>N | No |
ClinGen ExAC gnomAD |
|
CA387445465 rs1273304884 |
534 | L>W | No |
ClinGen gnomAD |
|
CA6901740 rs199522565 |
537 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762459334 CA6901742 |
539 | Q>P | No |
ClinGen ExAC gnomAD |
|
CA6901744 CA387445636 rs751885140 |
543 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1270894068 CA387445633 |
543 | M>R | No |
ClinGen TOPMed |
|
CA6901743 rs145056039 |
543 | M>V | No |
ClinGen ESP ExAC gnomAD |
|
CA6901745 rs774528734 |
544 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 548 | F>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs756212096 CA387445786 |
550 | K>N | No |
ClinGen ExAC gnomAD |
|
rs779928235 CA6901750 |
551 | H>L | No |
ClinGen ExAC gnomAD |
|
rs1216203779 CA387445819 |
552 | L>F | No |
ClinGen TOPMed gnomAD |
|
CA387445830 COSM397464 rs149143823 |
553 | D>H | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
CA6901752 rs149143823 |
553 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1355785933 CA387445941 |
558 | N>T | No |
ClinGen TOPMed |
|
rs1326344568 CA387445983 |
560 | A>V | No |
ClinGen TOPMed |
|
rs1021251644 CA246403810 |
562 | T>A | No |
ClinGen TOPMed |
|
CA387446009 rs1395654954 |
563 | D>N | No |
ClinGen TOPMed |
|
CA387446015 rs1402540885 |
563 | D>V | No |
ClinGen gnomAD |
|
rs746769123 CA6901755 |
564 | A>G | No |
ClinGen ExAC gnomAD |
|
CA387446034 rs746769123 |
564 | A>V | No |
ClinGen ExAC gnomAD |
|
CA387446045 rs1485407458 |
565 | I>T | No |
ClinGen gnomAD |
|
CA6901756 rs375121374 |
565 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA387446067 rs1305395603 |
566 | P>R | No |
ClinGen gnomAD |
|
rs776704913 CA6901757 |
566 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs780631679 CA6901772 |
569 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1308969732 CA387446209 |
569 | V>L | No |
ClinGen TOPMed gnomAD |
|
rs1408737900 CA387446223 |
570 | L>V | No |
ClinGen TOPMed |
|
CA387446269 rs1446430799 |
571 | R>S | No |
ClinGen gnomAD |
|
rs148589549 CA6901773 |
572 | D>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1375472189 CA387446281 |
572 | D>Y | No |
ClinGen TOPMed |
|
CA246403887 rs867502499 |
573 | A>D | No |
ClinGen gnomAD |
|
CA387446314 rs867502499 |
573 | A>G | No |
ClinGen gnomAD |
|
CA6901774 rs755125073 |
574 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA387446437 rs1565940865 |
578 | D>E | No |
ClinGen Ensembl |
|
rs528149101 CA246403888 |
579 | Y>* | No |
ClinGen 1000Genomes |
|
CA387446468 rs1358375721 |
580 | I>V | No |
ClinGen TOPMed |
|
CA6901775 rs779265302 |
581 | T>A | No |
ClinGen ExAC gnomAD |
|
rs143212176 CA6901776 |
581 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA387446495 rs1205648446 |
582 | V>I | No |
ClinGen TOPMed gnomAD |
|
rs1593484307 CA387446611 |
587 | N>K | No |
ClinGen Ensembl |
|
CA387446619 rs1276477273 |
588 | S>P | No |
ClinGen gnomAD |
|
rs772430497 CA6901777 |
590 | E>A | No |
ClinGen ExAC gnomAD |
|
CA246403897 rs200413985 |
591 | E>D | No |
ClinGen 1000Genomes gnomAD |
|
rs781078224 CA6901778 |
591 | E>K | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 593 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs984243785 CA246403902 |
594 | L>R | No |
ClinGen TOPMed |
|
CA6901779 rs745683026 |
595 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1475593414 CA387446785 |
596 | Q>R | No |
ClinGen TOPMed |
|
rs1169039865 CA387446796 |
597 | E>D | No |
ClinGen gnomAD |
|
CA246404895 rs751108425 |
598 | D>G | No |
ClinGen Ensembl |
|
rs374453532 CA246404896 |
600 | S>N | No |
ClinGen ESP TOPMed |
|
CA387448103 rs1347155474 |
605 | V>M | No |
ClinGen gnomAD |
|
rs765869872 CA6901826 |
606 | M>L | No |
ClinGen ExAC gnomAD |
|
rs764393170 CA6901830 |
609 | A>G | No |
ClinGen ExAC gnomAD |
|
CA6901829 rs376824629 |
609 | A>T | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
CA246404906 rs868088498 |
610 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA6901833 rs201521390 |
611 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs367691892 CA6901834 |
612 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA387448373 rs1473185738 |
615 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA387448433 rs1366184589 |
617 | L>P | No |
ClinGen gnomAD |
|
rs1457152115 CA387448438 |
618 | R>* | No |
ClinGen TOPMed gnomAD |
|
rs1457152115 CA387448437 |
618 | R>G | No |
ClinGen TOPMed gnomAD |
|
CA6901836 rs778850982 |
618 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs771618695 CA6901838 |
619 | L>F | No |
ClinGen ExAC gnomAD |
|
CA387448487 rs1393043453 |
620 | L>H | No |
ClinGen gnomAD |
|
CA387448479 rs1351075641 |
620 | L>V | No |
ClinGen gnomAD |
|
CA387448586 rs1425274898 |
625 | A>T | No |
ClinGen TOPMed |
|
CA6901841 rs770503364 |
625 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs760012733 CA6901843 |
627 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs776191160 CA6901845 |
629 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs764340085 CA6901847 COSM1677504 |
630 | R>Q | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs202022149 CA6901846 |
630 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1254607012 CA387448729 |
632 | K>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA387448724 rs1285245588 |
632 | K>R | No |
ClinGen TOPMed |
|
rs751591575 CA6901848 |
633 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs376405101 COSM3399266 CA6901849 |
634 | G>R | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
CA387448774 rs1386739512 |
635 | T>S | No |
ClinGen gnomAD |
|
CA387448787 rs1167784053 |
636 | T>A | No |
ClinGen gnomAD |
|
CA6901852 rs754805793 |
637 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA246404948 rs920844263 |
640 | H>R | No |
ClinGen TOPMed |
|
CA6901855 rs758336509 |
644 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1318626277 CA387449012 |
645 | N>D | No |
ClinGen TOPMed |
|
rs775227679 CA6901890 |
649 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1239145711 CA387449074 |
650 | V>A | No |
ClinGen TOPMed |
|
CA387449096 rs1433129295 |
652 | I>T | No |
ClinGen TOPMed gnomAD |
|
CA6901891 rs762698271 |
652 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA246405510 rs74926233 |
654 | L>F | No |
ClinGen ExAC gnomAD |
|
rs1367343990 CA387449116 |
654 | L>S | No |
ClinGen gnomAD |
|
rs756791347 CA6901894 |
655 | E>K | No |
ClinGen ExAC gnomAD |
|
rs766874821 CA6901895 |
656 | A>G | No |
ClinGen ExAC gnomAD |
|
CA387449152 rs1227282883 |
657 | G>R | No |
ClinGen gnomAD |
|
CA246405526 rs930509907 |
658 | A>D | No |
ClinGen TOPMed |
|
CA387449164 rs1420173845 |
658 | A>P | No |
ClinGen Ensembl |
|
CA387449257 rs1318410942 |
665 | S>T | No |
ClinGen gnomAD |
|
rs749962240 CA6901896 |
666 | N>S | No |
ClinGen ExAC gnomAD |
|
rs1245699109 CA387449348 |
670 | A>V | No |
ClinGen gnomAD |
|
CA387449364 rs1378461816 |
672 | M>V | No |
ClinGen TOPMed |
|
rs1295215286 CA387449644 |
678 | G>E | No |
ClinGen gnomAD |
|
TCGA novel | 678 | G>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1247699432 CA387449642 |
678 | G>R | No |
ClinGen gnomAD |
|
CA387449704 rs1440590524 |
683 | V>I | No |
ClinGen TOPMed gnomAD |
|
CA387449717 rs1208163796 |
684 | R>* | No |
ClinGen gnomAD |
|
CA6901928 rs773972916 |
684 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA387449755 rs1185655055 |
686 | V>I | No |
ClinGen gnomAD |
|
CA387449758 rs1185655055 |
686 | V>L | No |
ClinGen gnomAD |
|
rs761702859 CA6901930 |
687 | I>M | No |
ClinGen ExAC gnomAD |
|
CA246407384 rs1019914790 |
688 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
rs760250154 CA6901933 |
692 | D>E | No |
ClinGen ExAC gnomAD |
|
rs773334606 CA6901932 |
692 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA246407401 rs925339175 |
699 | H>N | No |
ClinGen TOPMed |
|
CA6901934 rs766055065 |
700 | Q>E | No |
ClinGen ExAC gnomAD |
|
rs375707927 CA246407404 |
700 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs764972403 CA6901938 |
702 | S>T | No |
ClinGen ExAC |
|
rs1222814472 CA387450136 |
705 | H>Y | No |
ClinGen TOPMed gnomAD |
|
CA387450168 rs1473274275 |
706 | F>S | No |
ClinGen gnomAD |
|
rs778576435 CA387450187 |
707 | A>G | No |
ClinGen TOPMed gnomAD |
|
CA387450177 rs1182505581 |
707 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA246407436 rs778576435 |
707 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1474138267 CA387450211 |
709 | Q>K | No |
ClinGen gnomAD |
|
rs921856841 CA246407441 |
711 | N>D | No |
ClinGen gnomAD |
|
rs921856841 CA387450238 |
711 | N>H | No |
ClinGen gnomAD |
|
rs769870702 CA246407448 |
712 | N>D | No |
ClinGen ExAC gnomAD |
|
rs769870702 CA6901946 |
712 | N>H | No |
ClinGen ExAC gnomAD |
|
CA6901947 rs780367926 |
712 | N>S | No |
ClinGen ExAC gnomAD |
|
rs1477364724 CA387450288 |
713 | V>M | No |
ClinGen TOPMed gnomAD |
|
rs771597562 CA6901948 COSM550731 |
714 | L>F | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
TCGA novel | 714 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA387450325 rs1430538419 |
715 | V>M | No |
ClinGen gnomAD |
|
rs1383841648 CA387450401 |
717 | D>E | No |
ClinGen gnomAD |
|
rs1340344186 CA387450376 COSM945772 |
717 | D>N | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
CA387450393 rs1253348012 |
717 | D>V | No |
ClinGen TOPMed |
|
rs1565943744 CA387450498 |
721 | N>S | No |
ClinGen Ensembl |
|
CA387450516 rs1329135500 |
722 | H>D | No |
ClinGen gnomAD |
|
CA387450513 rs1329135500 |
722 | H>N | No |
ClinGen gnomAD |
|
rs1404040856 CA387450523 |
722 | H>R | No |
ClinGen gnomAD |
|
rs1225470965 CA387450586 |
724 | E>G | No |
ClinGen gnomAD |
|
rs77814222 CA6901953 |
725 | T>I | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
CA6901984 rs762209749 |
727 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA387451210 rs1593492450 |
729 | V>A | No |
ClinGen Ensembl |
|
rs767892846 CA6901985 |
730 | A>G | No |
ClinGen ExAC gnomAD |
|
rs756146982 CA6901987 |
733 | T>S | No |
ClinGen ExAC gnomAD |
|
rs1245350672 CA387451260 |
736 | D>E | No |
ClinGen gnomAD |
|
CA387451255 rs1309202687 |
736 | D>N | No |
ClinGen TOPMed gnomAD |
|
rs1380921558 CA387451258 |
736 | D>V | No |
ClinGen gnomAD |
|
rs1254109002 CA387451265 |
737 | Y>C | No |
ClinGen TOPMed |
|
rs766418052 CA6901988 |
738 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA246408412 rs369237165 |
740 | A>D | No |
ClinGen Ensembl |
|
CA6901989 rs753982361 COSM945774 |
741 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA387451290 rs753982361 |
741 | R>G | No |
ClinGen ExAC gnomAD |
|
CA246408418 rs1035355252 |
741 | R>H | No |
ClinGen TOPMed gnomAD |
|
rs755202602 CA6901991 |
743 | A>V | No |
ClinGen ExAC gnomAD |
|
CA387451314 rs1197132792 |
746 | E>K | No |
ClinGen TOPMed gnomAD |
|
rs1202702763 CA387451327 |
747 | P>L | No |
ClinGen TOPMed |
|
rs1593492517 CA387451322 |
747 | P>S | No |
ClinGen Ensembl |
|
CA6901993 rs746777701 |
749 | F>S | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 750 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1343386318 CA387451348 |
751 | I>V | No |
ClinGen TOPMed |
|
rs145688067 CA6901995 |
752 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA387451370 rs1426639984 |
754 | H>R | No |
ClinGen gnomAD |
|
CA387451388 rs1169703820 |
757 | C>G | No |
ClinGen gnomAD |
|
rs745749667 CA6901996 |
757 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs769628961 CA6901997 |
759 | G>D | No |
ClinGen ExAC gnomAD |
|
rs1334653458 CA387451454 |
766 | F>L | No |
ClinGen TOPMed |
|
rs1404186016 CA387451459 |
767 | N>S | No |
ClinGen TOPMed gnomAD |
|
rs768269869 CA6902000 |
768 | Y>C | No |
ClinGen ExAC gnomAD |
|
rs748822688 CA6901999 |
768 | Y>H | No |
ClinGen ExAC |
|
CA387451476 rs1385139010 |
769 | K>N | No |
ClinGen TOPMed gnomAD |
|
CA6902001 rs773165222 |
770 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6902002 rs773165222 |
770 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA387451479 rs1593492598 |
770 | P>S | No |
ClinGen Ensembl |
|
rs767994690 CA6902003 |
771 | P>R | No |
ClinGen ExAC gnomAD |
|
CA387451487 rs916451083 |
772 | Q>E | No |
ClinGen TOPMed |
|
CA246408444 rs916451083 |
772 | Q>K | No |
ClinGen TOPMed |
|
TCGA novel | 773 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1168286008 CA387451507 |
774 | I>M | No |
ClinGen gnomAD |
|
CA6902004 rs200679525 |
774 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs369382546 CA246408459 |
775 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs369382546 CA6902005 |
775 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs369382546 CA387451508 |
775 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA387451542 rs1422027710 |
778 | S>F | No |
ClinGen gnomAD |
|
rs577259168 CA6902031 |
779 | G>S | No |
ClinGen 1000Genomes ExAC |
|
rs1301871728 CA387451549 |
780 | I>V | No |
ClinGen gnomAD |
|
rs1005752814 CA246409578 |
783 | F>L | No |
ClinGen TOPMed |
|
CA387451578 rs1370715115 |
784 | I>M | No |
ClinGen gnomAD |
|
CA387451595 rs1307053608 |
787 | A>T | No |
ClinGen gnomAD |
|
CA387451627 rs1337658727 |
791 | G>A | No |
ClinGen TOPMed |
|
rs1220101375 CA387451624 |
791 | G>S | No |
ClinGen gnomAD |
|
CA6902033 rs138439899 |
792 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs750197758 CA387451646 |
794 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6902034 rs750197758 |
794 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6902035 rs141938638 |
795 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs556890711 CA246409584 |
796 | A>D | No |
ClinGen ExAC gnomAD |
|
CA6902036 rs556890711 |
796 | A>G | No |
ClinGen ExAC gnomAD |
|
rs753841771 COSM3772782 CA6902037 |
797 | R>Q | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA246409585 rs887013916 |
797 | R>W | No |
ClinGen Ensembl |
|
rs754918141 CA6902038 |
799 | C>R | No |
ClinGen ExAC gnomAD |
|
rs1441648409 CA387451671 |
799 | C>Y | No |
ClinGen gnomAD |
|
TCGA novel | 800 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6902040 COSM945776 rs747635612 |
801 | P>L | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA6902041 rs747635612 |
801 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 803 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1440982457 CA387451712 |
805 | Q>R | No |
ClinGen gnomAD |
|
rs1243148376 CA387451727 |
807 | V>A | No |
ClinGen gnomAD |
|
rs1378406598 CA387451723 |
807 | V>I | No |
ClinGen gnomAD |
|
CA387451728 rs1439473899 |
808 | V>I | No |
ClinGen TOPMed |
|
rs1183846277 CA387451743 |
810 | N>S | No |
ClinGen TOPMed |
|
CA387451758 rs771489372 |
812 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA246409642 rs771489372 |
812 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6902045 rs771489372 |
812 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1237663440 CA387451779 |
815 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA6902046 rs777138474 |
815 | L>R | No |
ClinGen ExAC |
|
rs370429792 CA6902089 |
826 | S>P | No |
ClinGen ESP ExAC gnomAD |
|
rs1314091027 CA387452066 |
830 | V>A | No |
ClinGen TOPMed gnomAD |
|
CA387452068 rs1314091027 |
830 | V>G | No |
ClinGen TOPMed gnomAD |
|
rs1323817768 CA387452119 |
834 | N>S | No |
ClinGen gnomAD |
|
CA6902092 rs758360328 |
835 | K>E | No |
ClinGen ExAC gnomAD |
|
CA6902093 rs763452058 |
836 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1328745288 CA387452151 |
838 | I>L | No |
ClinGen TOPMed gnomAD |
|
rs928465585 CA246410201 |
843 | A>V | No |
ClinGen Ensembl |
|
CA387452193 rs1346499085 |
844 | P>S | No |
ClinGen TOPMed |
|
TCGA novel | 845 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 845 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs780611127 CA6902099 |
847 | K>M | No |
ClinGen ExAC gnomAD |
|
CA6902117 rs755837789 |
848 | V>A | No |
ClinGen ExAC gnomAD |
|
CA387452260 rs1344460167 |
853 | G>S | No |
ClinGen gnomAD |
|
rs1219493966 CA387452265 |
853 | G>V | No |
ClinGen gnomAD |
|
rs779516247 CA6902121 |
854 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1214921631 CA387452272 |
855 | Y>H | No |
ClinGen TOPMed gnomAD |
|
rs748205099 CA6902122 |
856 | R>G | No |
ClinGen ExAC gnomAD |
|
CA6902124 rs541458851 |
857 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA387452286 rs541458851 |
857 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1441298359 CA387452296 |
858 | Q>H | No |
ClinGen TOPMed |
No associated diseases with Q99549
6 regional properties for Q99549
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | Chromo/chromo shadow domain | 58 - 111 | IPR000953 |
repeat | Ankyrin repeat | 572 - 665 | IPR002110-1 |
repeat | Ankyrin repeat | 666 - 698 | IPR002110-2 |
repeat | Ankyrin repeat | 699 - 728 | IPR002110-3 |
conserved_site | Chromo domain, conserved site | 76 - 96 | IPR023779 |
domain | Chromo domain | 59 - 109 | IPR023780 |
Functions
8 GO annotations of cellular component
Name | Definition |
---|---|
cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
heterochromatin | A compact and highly condensed form of chromatin that is refractory to transcription. |
nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
nucleosome | A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures. |
nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
2 GO annotations of molecular function
Name | Definition |
---|---|
chromatin binding | Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
methylated histone binding | Binding to a histone in which a residue has been modified by methylation. |
5 GO annotations of biological process
Name | Definition |
---|---|
negative regulation of DNA-templated transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
negative regulation of gene expression, epigenetic | An epigenetic process that silences gene expression at specific genomic regions through chromatin remodelling either by modifying higher order chromatin fiber structure, nucleosomal histones, or the DNA. |
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate | Any process that stops, prevents, or reduces the frequency, rate or extent of single stranded viral RNA replication via double stranded DNA intermediate. |
positive regulation of DNA methylation-dependent heterochromatin assembly | Any process that increases the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation. |
regulation of DNA methylation | Any process that modulates the frequency, rate or extent of the covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine. |
21 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q04861 | NFKB1 | Nuclear factor NF-kappa-B p105 subunit | Gallus gallus (Chicken) | SS |
P98150 | NFKB2 | Nuclear factor NF-kappa-B p100 subunit | Gallus gallus (Chicken) | SS |
Q94527 | Rel | Nuclear factor NF-kappa-B p110 subunit | Drosophila melanogaster (Fruit fly) | EV |
P19838 | NFKB1 | Nuclear factor NF-kappa-B p105 subunit | Homo sapiens (Human) | SS |
Q00653 | NFKB2 | Nuclear factor NF-kappa-B p100 subunit | Homo sapiens (Human) | SS |
Q8N9B4 | ANKRD42 | Ankyrin repeat domain-containing protein 42 | Homo sapiens (Human) | PR |
Q6ZVZ8 | ASB18 | Ankyrin repeat and SOCS box protein 18 | Homo sapiens (Human) | PR |
P83916 | CBX1 | Chromobox protein homolog 1 | Homo sapiens (Human) | PR |
Q9Y232 | CDYL | Chromodomain Y-like protein | Homo sapiens (Human) | PR |
Q8N8U2 | CDYL2 | Chromodomain Y-like protein 2 | Homo sapiens (Human) | PR |
Q9CZK6 | Anks3 | Ankyrin repeat and SAM domain-containing protein 3 | Mus musculus (Mouse) | PR |
P25799 | Nfkb1 | Nuclear factor NF-kappa-B p105 subunit [Cleaved into: Nuclear factor NF-kappa-B p50 subunit] | Mus musculus (Mouse) | EV |
Q8VHA6 | Asb18 | Ankyrin repeat and SOCS box protein 18 | Mus musculus (Mouse) | PR |
Q9WTK5 | Nfkb2 | Nuclear factor NF-kappa-B p100 subunit [Cleaved into: Nuclear factor NF-kappa-B p52 subunit] | Mus musculus (Mouse) | EV |
Q9WTK2 | Cdyl | Chromodomain Y-like protein | Mus musculus (Mouse) | PR |
P83917 | Cbx1 | Chromobox protein homolog 1 | Mus musculus (Mouse) | PR |
Q9D5D8 | Cdyl2 | Chromodomain Y-like protein 2 | Mus musculus (Mouse) | PR |
Q6AYK9 | Cdyl | Chromodomain Y-like protein | Rattus norvegicus (Rat) | PR |
Q9TZM3 | lrk-1 | Leucine-rich repeat serine/threonine-protein kinase 1 | Caenorhabditis elegans | SS |
O22265 | CAO | Signal recognition particle 43 kDa protein, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
Q9SZI3 | NPR2 | Regulatory protein NPR2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
10 | 20 | 30 | 40 | 50 | 60 |
MEQVAEGARV | TAVPVSAADS | TEELAEVEEG | VGVVGEDNDA | AARGAEAFGD | SEEDGEDVFE |
70 | 80 | 90 | 100 | 110 | 120 |
VEKILDMKTE | GGKVLYKVRW | KGYTSDDDTW | EPEIHLEDCK | EVLLEFRKKI | AENKAKAVRK |
130 | 140 | 150 | 160 | 170 | 180 |
DIQRLSLNND | IFEANSDSDQ | QSETKEDTSP | KKKKKKLRQR | EEKSPDDLKK | KKAKAGKLKD |
190 | 200 | 210 | 220 | 230 | 240 |
KSKPDLESSL | ESLVFDLRTK | KRISEAKEEL | KESKKPKKDE | VKETKELKKV | KKGEIRDLKT |
250 | 260 | 270 | 280 | 290 | 300 |
KTREDPKENR | KTKKEKFVES | QVESESSVLN | DSPFPEDDSE | GLHSDSREEK | QNTKSARERA |
310 | 320 | 330 | 340 | 350 | 360 |
GQDMGLEHGF | EKPLDSAMSA | EEDTDVRGRR | KKKTPRKAED | TRENRKLENK | NAFLEKKTVP |
370 | 380 | 390 | 400 | 410 | 420 |
KKQRNQDRSK | SAAELEKLMP | VSAQTPKGRR | LSGEERGLWS | TDSAEEDKET | KRNESKEKYQ |
430 | 440 | 450 | 460 | 470 | 480 |
KRHDSDKEEK | GRKEPKGLKT | LKEIRNAFDL | FKLTPEEKND | VSENNRKREE | IPLDFKTIDD |
490 | 500 | 510 | 520 | 530 | 540 |
HKTKENKQSL | KERRNTRDET | DTWAYIAAEG | DQEVLDSVCQ | ADENSDGRQQ | ILSLGMDLQL |
550 | 560 | 570 | 580 | 590 | 600 |
EWMKLEDFQK | HLDGKDENFA | ATDAIPSNVL | RDAVKNGDYI | TVKVALNSNE | EYNLDQEDSS |
610 | 620 | 630 | 640 | 650 | 660 |
GMTLVMLAAA | GGQDDLLRLL | ITKGAKVNGR | QKNGTTALIH | AAEKNFLTTV | AILLEAGAFV |
670 | 680 | 690 | 700 | 710 | 720 |
NVQQSNGETA | LMKACKRGNS | DIVRLVIECG | ADCNILSKHQ | NSALHFAKQS | NNVLVYDLLK |
730 | 740 | 750 | 760 | 770 | 780 |
NHLETLSRVA | EETIKDYFEA | RLALLEPVFP | IACHRLCEGP | DFSTDFNYKP | PQNIPEGSGI |
790 | 800 | 810 | 820 | 830 | 840 |
LLFIFHANFL | GKEVIARLCG | PCSVQAVVLN | DKFQLPVFLD | SHFVYSFSPV | AGPNKLFIRL |
850 | |||||
TEAPSAKVKL | LIGAYRVQLQ |