Q96PU5
Gene name |
NEDD4L |
Protein name |
E3 ubiquitin-protein ligase NEDD4-like |
Names |
HECT-type E3 ubiquitin transferase NED4L, NEDD4.2, Nedd4-2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:23327 |
EC number |
2.3.2.26: Aminoacyltransferases |
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

18 structures for Q96PU5
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
2LAJ | NMR | - | A | 496-535 | PDB |
2LB2 | NMR | - | A | 386-420 | PDB |
2LTY | NMR | - | A | 385-417 | PDB |
2MPT | NMR | - | PDB | ||
2NSQ | X-ray | 185 A | A | 1-154 | PDB |
2ONI | X-ray | 220 A | A | 594-967 | PDB |
3JVZ | X-ray | 330 A | C/D | 596-975 | PDB |
3JW0 | X-ray | 310 A | C/D | 596-975 | PDB |
5HPK | X-ray | 243 A | A | 594-975 | PDB |
6ZBT | X-ray | 180 A | E/F/G/H | 338-347 | PDB |
6ZC9 | X-ray | 190 A | E/F/G/H | 444-453 | PDB |
7LP1 | X-ray | 135 A | A | 494-532 | PDB |
7LP2 | X-ray | 188 A | A/C/E | 385-418 | PDB |
7LP3 | X-ray | 161 A | A/C | 193-226 | PDB |
7LP4 | NMR | - | A | 493-539 | PDB |
7LP5 | NMR | - | A | 493-539 | PDB |
7NMZ | X-ray | 230 A | C | 335-455 | PDB |
AF-Q96PU5-F1 | Predicted | AlphaFoldDB |
631 variants for Q96PU5
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
CA402715919 rs1600253758 RCV000790908 |
91 | F>I | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV001209044 CA402551929 COSM191674 rs748006260 RCV001257767 |
147 | R>* | Intellectual disability Variant assessed as Somatic; 0.0 impact. large_intestine [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA dbSNP gnomAD |
rs903587997 CA300909035 RCV001239160 RCV002484305 |
178 | D>E | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV002489136 rs185533207 CA8975386 RCV000477215 |
179 | S>T | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001036110 CA8975394 rs764101138 RCV002551348 |
190 | L>F | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs375316659 RCV001066805 CA8975400 RCV002555858 |
194 | P>S | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001072145 RCV001862474 RCV001257766 rs2059194330 |
208 | R>Q | Intellectual disability Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinVar dbSNP |
RCV000460253 rs202231187 RCV002496847 CA8975447 |
233 | S>L | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs1187131098 CA402554435 RCV001332917 |
240 | I>N | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV000804248 rs747072217 CA8975457 RCV002477845 |
247 | R>Q | Variant assessed as Somatic; 9.282e-05 impact. Periventricular nodular heterotopia 7 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs2059568312 RCV001334842 |
252 | R>C | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001064368 CA402554763 rs1404724194 RCV002482081 |
271 | E>A | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA8975504 RCV000819476 rs773477776 RCV002501131 |
291 | L>V | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002499379 rs749019037 CA8975519 RCV000734557 |
322 | N>S | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
COSM3719537 RCV001050920 COSM3719538 RCV002553731 rs375898604 RCV002505596 CA8975543 |
345 | D>N | Periventricular nodular heterotopia 7 haematopoietic_and_lymphoid_tissue Inborn genetic diseases [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001252598 CA8975561 RCV000662168 rs200565814 |
363 | A>V | Intellectual disability Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA8975652 RCV001051788 rs141078303 CA8975653 RCV002553266 |
427 | G>R | Inborn genetic diseases [ClinVar] | Yes |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD ClinVar dbSNP |
CA8975655 rs775630982 RCV000521270 RCV002490915 |
439 | P>L | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV000492069 CA402562767 rs1131690797 |
445 | R>C | Variant assessed as Somatic; impact. Primary dilated cardiomyopathy [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
CA8975690 RCV001239623 RCV003166493 rs757173296 |
466 | V>I | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA8975693 RCV000864870 RCV002478963 rs200221331 |
468 | R>Q | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs965302278 RCV002497756 CA300873592 RCV001221892 |
486 | N>S | Variant assessed as Somatic; 0.0 impact. Periventricular nodular heterotopia 7 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
RCV002481931 CA402537401 RCV001046981 rs1297218616 |
495 | T>A | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA8975706 rs573738976 RCV000814792 RCV002495146 |
508 | A>V | Variant assessed as Somatic; 0.0 impact. Periventricular nodular heterotopia 7 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA dbSNP gnomAD |
RCV000810228 RCV002487753 CA402537521 rs1365042367 |
512 | R>Q | Variant assessed as Somatic; 0.0 impact. Periventricular nodular heterotopia 7 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
CA8975737 RCV002493808 RCV001351219 rs369952868 |
536 | M>R | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001232002 RCV002504315 CA8975769 rs769198983 |
564 | T>K | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002504440 rs1008436842 CA300890017 RCV001297808 |
626 | N>T | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
CA402546743 rs1477791039 RCV001040816 RCV002481883 |
628 | F>I | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
CA10576009 VAR_077880 rs879255599 |
679 | Y>C | PVNH7 [UniProt] | Yes |
ClinGen UniProt Ensembl dbSNP |
rs1160840546 RCV001249661 |
688 | T>R | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinVar dbSNP |
rs879255598 VAR_077881 CA10576010 |
694 | Q>H | PVNH7; increased degradation; changed function in regulation of TOR signaling [UniProt] | Yes |
ClinGen UniProt Ensembl dbSNP |
CA16608017 RCV002481345 RCV000432003 rs377143286 |
698 | N>S | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs370592782 RCV002538188 RCV000814242 CA8975880 |
720 | A>S | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs1242218314 RCV001234127 RCV002484278 CA402550951 |
735 | F>L | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV001201659 RCV003163511 rs751509135 CA8975903 |
747 | N>S | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs2046707868 RCV001031004 |
749 | M>V | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinVar dbSNP |
RCV002479327 CA8975925 RCV001053806 rs202127939 |
758 | N>S | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV002499626 rs778557607 CA8975955 RCV001322055 |
822 | K>T | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002535934 rs746532070 RCV000821875 CA8976002 |
872 | G>S | Variant assessed as Somatic; 4.642e-05 impact. Inborn genetic diseases [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
CA8976034 RCV002489733 rs775922627 RCV001091654 |
889 | L>F | Periventricular nodular heterotopia 7 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
VAR_077882 CA10576011 rs879255597 COSM989217 COSM989219 |
893 | E>K | Variant assessed as Somatic; impact. endometrium PVNH7; increased degradation; changed function in regulation of TOR signaling [NCI-TCGA, Cosmic, UniProt] | Yes |
ClinGen cosmic curated UniProt Ensembl NCI-TCGA dbSNP |
VAR_077883 rs879255596 CA10576012 |
897 | R>Q | Variant assessed as Somatic; impact. PVNH7; increased degradation; changed function in regulation of TOR signaling [NCI-TCGA, UniProt] | Yes |
ClinGen UniProt Ensembl NCI-TCGA dbSNP |
RCV002491802 CA8976070 RCV001241103 rs777624478 |
958 | R>Q | Variant assessed as Somatic; 0.0 impact. Periventricular nodular heterotopia 7 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs62094319 CA301394125 |
2 | A>E | No |
ClinGen gnomAD |
|
CA8975049 rs774159867 |
4 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8975048 rs768863821 |
4 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs201307997 RCV000861367 CA8975050 |
5 | L>F | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA402715011 CA402715012 rs1345758274 |
6 | G>R | No |
ClinGen TOPMed gnomAD |
|
CA402715018 rs1297376280 |
7 | E>* | No |
ClinGen Ensembl |
|
CA8975051 rs551206250 |
7 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1598897813 CA402715019 |
7 | E>G | No |
ClinGen Ensembl |
|
CA8975052 rs375577826 |
8 | P>Q | No |
ClinGen ESP ExAC gnomAD |
|
rs1598897848 CA402715033 |
9 | V>G | No |
ClinGen Ensembl |
|
CA402715028 rs1209753272 |
9 | V>I | No |
ClinGen TOPMed |
|
CA8975053 rs760237657 RCV001235833 |
10 | Y>C | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs760237657 CA402715038 |
10 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA402715034 rs1185203471 |
10 | Y>N | No |
ClinGen gnomAD |
|
CA402715056 rs1392756435 |
13 | S>C | No |
ClinGen gnomAD |
|
CA8975054 rs766377475 |
13 | S>P | No |
ClinGen ExAC gnomAD |
|
rs12968145 CA8975056 |
15 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs12968145 CA301394126 |
15 | D>Y | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 16 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs769255133 CA8975113 |
17 | G>A | No |
ClinGen ExAC gnomAD |
|
CA402715209 rs1273725561 |
18 | E>G | No |
ClinGen gnomAD |
|
CA402715204 rs1321972184 |
18 | E>K | No |
ClinGen gnomAD |
|
CA8975114 rs370078893 |
19 | S>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8975115 RCV001041211 COSM989180 rs373553230 |
20 | R>C | endometrium [Cosmic] | No |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
CA8975116 rs375068828 RCV001237367 |
20 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs901451076 CA301408450 |
22 | L>V | No |
ClinGen TOPMed gnomAD |
|
rs1209086085 CA402715240 |
24 | V>I | No |
ClinGen gnomAD |
|
TCGA novel | 24 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1248936515 CA402715254 |
26 | V>I | No |
ClinGen TOPMed gnomAD |
|
CA8975117 rs774070850 |
27 | V>I | No |
ClinGen ExAC gnomAD |
|
CA402715281 rs1196933522 |
30 | I>T | No |
ClinGen gnomAD |
|
rs776869289 CA8975120 |
33 | A>D | No |
ClinGen ExAC gnomAD |
|
COSM989184 rs771098028 COSM989186 CA8975119 RCV001034374 |
33 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs1457084325 CA402715308 |
34 | K>N | No |
ClinGen gnomAD |
|
rs1321626067 CA402715344 |
39 | G>E | No |
ClinGen gnomAD |
|
rs2036786192 RCV001349564 |
41 | S>G | No |
ClinVar dbSNP |
|
rs1311632359 CA402715562 |
42 | D>Y | No |
ClinGen TOPMed |
|
rs1168022706 CA402715573 |
43 | P>L | No |
ClinGen gnomAD |
|
rs1412067241 CA402715578 |
44 | Y>C | No |
ClinGen gnomAD |
|
rs367741894 CA8975241 |
45 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs2047139560 RCV001034514 |
46 | K>R | No |
ClinVar dbSNP |
|
CA8975242 rs746306800 |
47 | L>F | No |
ClinGen ExAC gnomAD |
|
rs1600177605 CA402715621 RCV000801326 |
51 | V>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA402715636 rs1380359617 |
53 | D>G | No |
ClinGen TOPMed |
|
CA301417768 rs1053560286 |
53 | D>N | No |
ClinGen TOPMed |
|
rs1452110886 CA402715646 |
54 | E>D | No |
ClinGen TOPMed |
|
CA8975245 rs749659281 |
54 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA402715641 rs749659281 |
54 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs200025824 CA8975246 RCV000792979 |
55 | N>D | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1192088763 CA402715652 |
55 | N>K | No |
ClinGen TOPMed |
|
rs1217351344 CA402715650 |
55 | N>S | No |
ClinGen gnomAD |
|
rs1277689015 CA402715657 |
56 | R>T | No |
ClinGen gnomAD |
|
rs1600177838 CA402715667 |
57 | E>D | No |
ClinGen Ensembl |
|
CA301417769 rs866161211 |
59 | A>S | No |
ClinGen Ensembl |
|
CA402715688 rs1205300134 |
61 | V>L | No |
ClinGen gnomAD |
|
rs910907201 CA301417770 |
65 | T>K | No |
ClinGen TOPMed |
|
CA301417771 rs646509 |
66 | I>L | No |
ClinGen Ensembl |
|
rs774104851 CA8975248 |
66 | I>N | No |
ClinGen ExAC gnomAD |
|
rs1242715944 CA402715726 |
67 | K>E | No |
ClinGen gnomAD |
|
TCGA novel | 67 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1216505218 CA402715740 |
68 | K>N | No |
ClinGen TOPMed |
|
rs750511549 CA8975261 |
69 | T>I | No |
ClinGen ExAC gnomAD |
|
CA402715778 rs1196820903 |
73 | K>E | No |
ClinGen gnomAD |
|
CA402715812 rs1331870721 |
77 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA8975278 rs762094975 |
82 | V>I | No |
ClinGen ExAC gnomAD |
|
rs767767265 CA8975279 |
83 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA402715871 rs1471566713 |
83 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
TCGA novel | 85 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1478849700 CA402715885 |
85 | S>F | No |
ClinGen TOPMed |
|
CA8975281 rs760779722 |
87 | H>L | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 100 | T>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA402547752 rs1383776547 |
101 | R>* | No |
ClinGen TOPMed gnomAD |
|
rs1248345919 CA402547757 |
101 | R>Q | No |
ClinGen gnomAD |
|
CA8975304 rs765817235 |
103 | D>N | No |
ClinGen ExAC |
|
rs758747799 CA300901517 |
109 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA402548114 rs1253943186 |
109 | D>V | No |
ClinGen TOPMed |
|
rs1228729549 CA402548098 |
109 | D>Y | No |
ClinGen gnomAD |
|
CA8975308 rs777311647 RCV001214973 |
110 | V>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA8975307 rs777311647 |
110 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA402548164 rs1265428529 |
111 | P>A | No |
ClinGen TOPMed |
|
rs1568669229 CA402548207 |
112 | L>P | No |
ClinGen Ensembl |
|
RCV001323472 rs2058221483 |
113 | S>C | No |
ClinVar dbSNP |
|
CA402548240 rs1217133917 |
113 | S>I | No |
ClinGen TOPMed |
|
rs756725290 CA8975309 |
114 | H>R | No |
ClinGen ExAC gnomAD |
|
rs1243436799 CA402548355 |
116 | P>A | No |
ClinGen gnomAD |
|
COSM245992 CA300901532 rs572854572 |
116 | P>L | prostate [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
rs755584937 RCV001340938 |
119 | D>G | No |
ClinVar dbSNP |
|
rs755584937 CA8975332 |
119 | D>V | No |
ClinGen ExAC gnomAD |
|
rs1471095573 CA402551232 |
124 | R>* | No |
ClinGen gnomAD |
|
CA8975334 COSM989189 COSM989187 rs749180174 |
124 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA300906783 rs886452010 |
126 | Y>C | No |
ClinGen TOPMed gnomAD |
|
CA300906786 rs924232010 |
129 | K>R | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 132 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1284355400 CA402551537 |
136 | R>G | No |
ClinGen gnomAD |
|
CA402551575 rs747869818 |
137 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8975337 rs747869818 |
137 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA300907333 rs1019679859 |
141 | R>Q | No |
ClinGen TOPMed |
|
CA402551876 rs1481096195 |
144 | G>V | No |
ClinGen gnomAD |
|
CA402551884 rs1237093210 |
145 | F>L | No |
ClinGen TOPMed |
|
CA402551931 rs1444142773 |
147 | R>Q | No |
ClinGen gnomAD |
|
rs758216461 CA8975358 RCV001346197 |
149 | K>E | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001034178 rs1387631298 CA402551968 |
149 | K>N | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs2059009305 RCV001322955 |
150 | M>I | No |
ClinVar dbSNP |
|
rs1428314420 CA402551986 |
151 | A>T | No |
ClinGen gnomAD |
|
CA402552025 RCV001045049 rs1355436205 |
153 | M>I | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1178688498 CA402552016 |
153 | M>V | No |
ClinGen TOPMed |
|
rs1220311104 CA402552038 |
154 | P>R | No |
ClinGen TOPMed |
|
rs987748532 CA300907379 |
154 | P>T | No |
ClinGen TOPMed |
|
CA402552044 rs1376837582 |
155 | K>E | No |
ClinGen gnomAD |
|
rs964462807 CA300907385 |
155 | K>R | No |
ClinGen Ensembl |
|
rs1601236438 RCV000996693 |
156 | N>missing | No |
ClinVar dbSNP |
|
TCGA novel | 156 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 156 | N>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs781576892 CA8975359 |
156 | N>S | No |
ClinGen ExAC gnomAD |
|
rs746022345 CA8975361 RCV001301616 |
161 | E>G | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA8975362 rs770138140 |
162 | E>D | No |
ClinGen ExAC gnomAD |
|
CA402552158 rs1238697790 |
163 | N>D | No |
ClinGen TOPMed |
|
rs2059012277 RCV001306334 |
164 | S>G | No |
ClinVar dbSNP |
|
RCV001232939 rs1339990901 CA402552209 |
166 | Q>E | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs2059012885 RCV001309410 |
170 | M>V | No |
ClinVar dbSNP |
|
rs1273488614 CA402552286 |
171 | E>K | No |
ClinGen TOPMed gnomAD |
|
rs772551955 CA402552471 |
172 | H>L | No |
ClinGen ExAC gnomAD |
|
CA8975385 rs772551955 |
172 | H>R | No |
ClinGen ExAC gnomAD |
|
CA8975384 RCV000983863 rs376332407 |
172 | H>Y | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001034488 rs2059187873 |
176 | V>I | No |
ClinVar dbSNP |
|
rs760992833 CA402552554 |
182 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770647033 RCV001343847 CA8975388 |
182 | S>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs760992833 RCV001345121 CA8975387 |
182 | S>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
CA402552558 rs372009925 |
183 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8975390 rs372009925 RCV001034144 |
183 | A>T | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000936153 rs532202382 CA8975391 |
184 | S>F | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
CA402552581 rs1360257788 |
186 | H>Q | No |
ClinGen TOPMed |
|
rs752252065 CA8975392 |
186 | H>R | No |
ClinGen ExAC gnomAD |
|
CA8975393 RCV001041533 rs763043961 |
189 | E>G | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA402552599 rs1225069951 |
189 | E>Q | No |
ClinGen TOPMed gnomAD |
|
rs1167552515 CA402552607 |
190 | L>H | No |
ClinGen gnomAD |
|
CA402552618 rs1204697883 RCV001038638 |
192 | P>S | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs756966376 CA8975398 |
193 | P>H | No |
ClinGen ExAC |
|
rs756966376 CA402552626 |
193 | P>L | No |
ClinGen ExAC |
|
rs755092498 CA8975401 |
194 | P>L | No |
ClinGen ExAC gnomAD |
|
RCV001038173 rs747010088 |
194 | P>missing | No |
ClinVar dbSNP |
|
rs1201967752 COSM709266 CA402552644 COSM709267 |
197 | P>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs561684774 CA8975404 |
198 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs79871407 CA300909188 |
201 | E>G | No |
ClinGen Ensembl |
|
rs1601261633 RCV000816047 CA402552695 |
203 | V>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
TCGA novel | 203 | V>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 214 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs769476442 CA8975411 |
215 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8975410 rs769476442 |
215 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1334263665 CA402552894 |
217 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
RCV001343305 CA402552997 rs1243405379 |
225 | S>G | No |
ClinGen ClinVar TOPMed dbSNP |
|
rs765464540 CA402554360 |
228 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs987266983 CA300912940 |
228 | D>N | No |
ClinGen TOPMed gnomAD |
|
CA402554363 rs752858201 |
229 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs752858201 CA8975442 |
229 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA402554372 rs1601316857 COSM1523687 COSM1523688 |
230 | S>F | lung [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA8975443 rs758477675 |
231 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8975446 rs757754811 |
232 | E>G | No |
ClinGen ExAC gnomAD |
|
RCV001070976 CA402554388 rs202231187 |
233 | S>W | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs374596225 CA402554397 |
234 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs375921587 CA8975450 |
235 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs543275250 CA8975451 |
237 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8975453 rs778348493 |
239 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs555286058 CA8975452 |
239 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
CA402554434 rs1260961412 |
240 | I>F | No |
ClinGen TOPMed gnomAD |
|
CA402554433 rs1260961412 RCV001339352 |
240 | I>V | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1265950403 CA402554449 |
242 | Q>* | No |
ClinGen Ensembl |
|
rs1195130035 CA402554465 |
244 | A>S | No |
ClinGen TOPMed gnomAD |
|
rs1195130035 CA402554463 |
244 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs1426910030 CA402554468 |
244 | A>V | No |
ClinGen gnomAD |
|
CA402554478 rs747660836 |
246 | H>P | No |
ClinGen ExAC gnomAD |
|
CA8975454 rs747660836 |
246 | H>R | No |
ClinGen ExAC gnomAD |
|
CA402554484 RCV000802398 rs747072217 |
247 | R>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA8975456 rs771932025 |
247 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770645785 CA8975458 |
248 | R>C | No |
ClinGen ExAC gnomAD |
|
CA300913103 rs948274978 RCV000935703 |
248 | R>H | No |
ClinGen ClinVar dbSNP gnomAD |
|
CA300913106 rs1045059982 |
250 | R>C | No |
ClinGen Ensembl |
|
rs1383247620 CA402554500 |
250 | R>H | No |
ClinGen gnomAD |
|
TCGA novel | 252 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs2059568831 RCV001217582 |
256 | S>N | No |
ClinVar dbSNP |
|
rs1283539410 CA402554570 |
258 | D>H | No |
ClinGen gnomAD |
|
CA402554618 rs1259612443 |
260 | E>D | No |
ClinGen gnomAD |
|
CA8975463 rs764280225 RCV000864475 |
261 | P>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000796692 rs761913257 COSM3670217 COSM3670216 CA8975465 |
262 | E>K | upper_aerodigestive_tract central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
CA402554646 rs1490130117 |
263 | P>S | No |
ClinGen gnomAD |
|
CA300913189 RCV001034362 rs200330105 |
264 | S>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA8975466 rs200330105 |
264 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs995451062 CA300913205 |
265 | E>D | No |
ClinGen gnomAD |
|
CA402554687 rs1363271940 |
267 | G>R | No |
ClinGen TOPMed gnomAD |
|
rs1016545577 CA300913219 |
268 | D>G | No |
ClinGen TOPMed |
|
CA402554699 rs1467050147 |
268 | D>Y | No |
ClinGen TOPMed |
|
rs373720887 RCV001313844 CA300913231 |
271 | E>K | No |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
|
RCV000863489 CA300914931 rs371954364 |
272 | P>L | No |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
|
CA8975494 rs757981794 |
272 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs75307567 CA300914933 |
273 | W>* | No |
ClinGen Ensembl |
|
rs1019412718 CA300914932 |
273 | W>R | No |
ClinGen TOPMed gnomAD |
|
rs1409593114 CA402555331 |
274 | E>K | No |
ClinGen gnomAD |
|
CA8975497 rs757226603 |
280 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs549070916 CA8975498 |
281 | N>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1408580789 CA402555446 |
283 | A>P | No |
ClinGen gnomAD |
|
CA402555445 rs1408580789 |
283 | A>T | No |
ClinGen gnomAD |
|
CA402555472 rs1189206051 |
285 | D>A | No |
ClinGen TOPMed |
|
rs1170185787 CA402555492 |
286 | S>F | No |
ClinGen gnomAD |
|
CA8975500 rs769574778 |
288 | G>C | No |
ClinGen ExAC gnomAD |
|
CA8975501 rs769574778 |
288 | G>S | No |
ClinGen ExAC gnomAD |
|
rs376568942 CA402555519 |
289 | L>V | No |
ClinGen ESP gnomAD |
|
rs748474298 CA8975503 |
290 | A>S | No |
ClinGen ExAC gnomAD |
|
CA8975502 rs748474298 RCV001343604 |
290 | A>T | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
TCGA novel | 290 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA402555550 rs1359697888 |
292 | P>S | No |
ClinGen gnomAD |
|
CA300914962 rs1049200962 |
293 | P>A | No |
ClinGen Ensembl |
|
CA300914985 rs760793783 |
293 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs760793783 CA8975505 |
293 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA402555570 rs988690506 |
294 | P>Q | No |
ClinGen TOPMed gnomAD |
|
CA300914988 rs988690506 |
294 | P>R | No |
ClinGen TOPMed gnomAD |
|
CA8975506 rs767012351 |
294 | P>S | No |
ClinGen ExAC gnomAD |
|
CA402555581 rs1261449046 |
295 | P>A | No |
ClinGen gnomAD |
|
rs147209028 CA8975508 |
295 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs147209028 RCV001219442 |
295 | P>Q | No |
ClinVar dbSNP |
|
rs147209028 CA402555584 |
295 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs369196753 CA8975510 |
299 | G>A | No |
ClinGen ESP ExAC gnomAD |
|
CA300915000 rs779437307 |
300 | S>F | No |
ClinGen Ensembl |
|
rs372196719 RCV001298829 CA8975512 |
301 | R>Q | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs968257095 RCV001065264 CA300915008 |
301 | R>W | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs2059730890 RCV001295794 |
304 | P>L | No |
ClinVar dbSNP |
|
rs2059730728 RCV001049340 |
304 | P>S | No |
ClinVar dbSNP |
|
CA402555666 rs1368938795 |
305 | Q>R | No |
ClinGen TOPMed |
|
CA402555709 rs1277113788 |
308 | S>L | No |
ClinGen TOPMed |
|
CA8975514 rs756707823 |
310 | E>K | No |
ClinGen ExAC gnomAD |
|
rs2059732245 RCV001034251 |
312 | S>N | No |
ClinVar dbSNP |
|
TCGA novel | 316 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1343420176 CA402555826 |
316 | Q>R | No |
ClinGen gnomAD |
|
TCGA novel | 317 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8975516 rs745740597 |
317 | I>V | No |
ClinGen ExAC gnomAD |
|
rs756003748 CA8975517 |
318 | T>I | No |
ClinGen ExAC gnomAD |
|
CA402555862 rs1342172777 |
319 | P>A | No |
ClinGen gnomAD |
|
TCGA novel | 320 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8975518 rs376389246 |
321 | S>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA402555899 rs1281622732 |
322 | N>D | No |
ClinGen gnomAD |
|
RCV000821466 CA300915106 RCV001193518 rs991844120 |
323 | G>A | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA402555918 rs991844120 |
323 | G>V | No |
ClinGen TOPMed gnomAD |
|
CA402555926 rs1413687345 |
324 | E>K | No |
ClinGen TOPMed |
|
rs1489484267 CA402555989 |
326 | F>I | No |
ClinGen TOPMed gnomAD |
|
rs190926188 RCV001237653 CA8975522 |
327 | S>N | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA402556050 rs1478144076 |
328 | S>F | No |
ClinGen gnomAD |
|
CA402556039 rs1428245744 |
328 | S>P | No |
ClinGen TOPMed gnomAD |
|
CA402556038 rs1428245744 |
328 | S>T | No |
ClinGen TOPMed gnomAD |
|
CA402556055 rs1263066048 |
329 | L>S | No |
ClinGen gnomAD |
|
rs1601342676 CA402556078 RCV000799980 |
330 | I>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs771064505 CA8975523 |
330 | I>V | No |
ClinGen ExAC gnomAD |
|
CA8975538 rs527255863 |
332 | R>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
RCV001308989 rs2041359916 |
336 | S>P | No |
ClinVar dbSNP |
|
rs747298837 CA8975540 |
341 | C>G | No |
ClinGen ExAC gnomAD |
|
CA402556690 RCV001231274 rs1388246823 |
343 | V>I | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA402556720 rs1451132596 |
344 | T>S | No |
ClinGen TOPMed |
|
CA8975545 RCV000798424 rs545427970 |
346 | A>T | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA8975546 rs763389898 RCV001058820 |
346 | A>V | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs768944555 CA8975547 |
348 | A>V | No |
ClinGen ExAC gnomAD |
|
rs2041364455 RCV001318637 |
349 | E>Q | No |
ClinVar dbSNP |
|
CA402556841 rs1211941930 |
350 | Q>E | No |
ClinGen gnomAD |
|
CA402556901 rs1270448589 |
351 | G>A | No |
ClinGen gnomAD |
|
rs774694587 CA8975548 |
351 | G>R | No |
ClinGen ExAC |
|
CA402556932 rs924303449 |
352 | H>L | No |
ClinGen TOPMed gnomAD |
|
CA300916932 rs924303449 |
352 | H>R | No |
ClinGen TOPMed gnomAD |
|
VAR_023415 rs767136811 RCV000867609 CA8975550 |
355 | P>L | Variant assessed as Somatic; 0.0 impact. impaired ability to inhibit SCNN [NCI-TCGA, UniProt] | No |
ClinGen ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
TCGA novel | 355 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA402558392 rs1201691357 |
357 | S>G | No |
ClinGen TOPMed |
|
TCGA novel | 357 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs781523882 CA8975560 |
360 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8975562 rs200565814 |
363 | A>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8975563 rs780617420 |
364 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
COSM1389270 rs373080858 CA8975564 |
364 | R>H | large_intestine Variant assessed as Somatic; 9.282e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
rs774749498 CA8975566 |
366 | S>* | No |
ClinGen ExAC gnomAD |
|
rs1302326421 CA402558625 |
367 | T>A | No |
ClinGen gnomAD |
|
rs1232919338 CA402558650 |
368 | V>I | No |
ClinGen TOPMed gnomAD |
|
CA402558670 rs1601399749 |
369 | T>A | No |
ClinGen Ensembl |
|
CA8975569 rs199527463 |
369 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs199527463 CA8975568 |
369 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1340323335 CA402558699 |
370 | G>D | No |
ClinGen gnomAD |
|
rs765869459 CA8975571 |
372 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1023433977 CA300918052 |
374 | P>A | No |
ClinGen Ensembl |
|
rs753372731 CA402558827 |
375 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM989193 rs753372731 CA8975572 |
375 | T>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs867675966 CA300921977 |
376 | P>S | No |
ClinGen Ensembl |
|
rs753954381 CA8975600 |
380 | Y>C | No |
ClinGen ExAC gnomAD |
|
RCV001059637 rs2042355371 |
380 | Y>H | No |
ClinVar dbSNP |
|
rs1002690517 CA300921987 |
382 | H>N | No |
ClinGen TOPMed |
|
CA300921991 rs1039095191 RCV001305836 |
382 | H>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs370254467 CA8975602 |
384 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs370254467 RCV001040059 |
384 | T>R | No |
ClinVar dbSNP |
|
RCV001071934 rs543506411 CA8975604 |
385 | P>L | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
CA402561002 rs543506411 |
385 | P>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8975608 rs776297860 |
389 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA300922054 rs1010706982 |
392 | E>Q | No |
ClinGen Ensembl |
|
CA402561275 rs745384885 |
395 | K>N | No |
ClinGen ExAC gnomAD |
|
CA300922063 rs868658981 |
397 | A>D | No |
ClinGen Ensembl |
|
CA8975611 rs775137243 |
397 | A>T | No |
ClinGen ExAC gnomAD |
|
rs1440352203 CA402561364 |
398 | K>E | No |
ClinGen gnomAD |
|
COSM269711 CA402561408 rs1460158008 COSM989194 |
400 | R>C | oesophagus large_intestine Variant assessed as Somatic; impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
CA402561422 rs1383866958 RCV000899292 |
400 | R>H | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs1383866958 CA402561417 |
400 | R>L | No |
ClinGen gnomAD |
|
CA300922072 rs764292982 |
402 | Y>* | No |
ClinGen gnomAD |
|
CA8975616 rs766536186 |
402 | Y>F | No |
ClinGen ExAC gnomAD |
|
rs761631435 CA8975615 |
402 | Y>H | No |
ClinGen ExAC |
|
TCGA novel | 403 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 404 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8975617 rs754006042 |
404 | V>L | No |
ClinGen ExAC gnomAD |
|
rs1330224857 CA402561576 |
405 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs2042365082 RCV001309431 |
406 | H>R | No |
ClinVar dbSNP |
|
rs1400423963 CA402561655 |
407 | N>S | No |
ClinGen gnomAD |
|
CA8975618 rs759746029 |
408 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1312844888 CA402561770 |
409 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA402561783 rs765354549 |
410 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8975619 rs765354549 RCV001226037 |
410 | T>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
TCGA novel | 411 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs375632687 CA8975621 RCV001368044 |
412 | T>A | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA8975622 rs778300242 |
412 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA402561924 rs1197017996 |
415 | R>* | No |
ClinGen gnomAD |
|
rs1257608713 RCV001222203 CA402561927 |
415 | R>Q | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA16607958 rs1057524052 RCV000421607 |
417 | I>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001233977 CA8975625 rs780996467 |
418 | M>I | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1236299484 CA402562046 |
418 | M>T | No |
ClinGen gnomAD |
|
rs757583506 CA8975624 |
418 | M>V | No |
ClinGen ExAC gnomAD |
|
rs1601476338 CA402562277 |
421 | A>S | No |
ClinGen Ensembl |
|
rs1264313027 CA402562297 |
422 | E>K | No |
ClinGen gnomAD |
|
rs1489454109 CA402562347 |
423 | D>H | No |
ClinGen TOPMed gnomAD |
|
CA402562351 rs1489454109 |
423 | D>N | No |
ClinGen TOPMed gnomAD |
|
CA8975650 rs748170219 RCV001034475 |
425 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
rs1359587899 CA402562518 |
432 | S>G | No |
ClinGen Ensembl |
|
RCV000872325 rs1245506692 CA402562542 |
433 | N>D | No |
ClinGen ClinVar TOPMed dbSNP |
|
CA402562549 RCV000798875 rs1159067435 |
433 | N>S | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA402562585 rs1362252752 |
434 | N>K | No |
ClinGen gnomAD |
|
CA402562588 rs1284574461 |
435 | H>N | No |
ClinGen TOPMed |
|
rs368435758 CA402562634 |
437 | I>M | No |
ClinGen gnomAD |
|
rs989383241 CA300922586 |
437 | I>V | No |
ClinGen TOPMed gnomAD |
|
rs1465434906 CA402562637 |
438 | E>K | No |
ClinGen Ensembl |
|
CA8975656 rs762946023 |
442 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA8975657 RCV000983858 rs34792654 |
442 | R>H | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
TCGA novel | 443 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA402562802 rs1319389941 |
447 | L>F | No |
ClinGen gnomAD |
|
rs762433818 CA8975659 |
449 | S>W | No |
ClinGen ExAC gnomAD |
|
CA402562878 rs1208361468 |
451 | T>A | No |
ClinGen TOPMed gnomAD |
|
rs2042454132 RCV001338254 |
451 | T>I | No |
ClinVar dbSNP |
|
TCGA novel | 454 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1469777807 CA402562957 |
455 | S>C | No |
ClinGen gnomAD |
|
rs1223192688 CA402562971 |
456 | A>D | No |
ClinGen TOPMed gnomAD |
|
rs756501638 CA8975662 |
456 | A>T | No |
ClinGen ExAC gnomAD |
|
rs1223192688 CA402562973 |
456 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA8975663 rs766146854 RCV000917890 |
457 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs766146854 CA402562988 |
457 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8975687 rs757843851 |
460 | G>D | No |
ClinGen ExAC gnomAD |
|
CA402536917 rs1341466598 |
461 | A>G | No |
ClinGen gnomAD |
|
TCGA novel | 463 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA402536958 rs1247364915 |
464 | S>L | No |
ClinGen gnomAD |
|
CA300873541 rs904492158 |
464 | S>P | No |
ClinGen TOPMed |
|
rs1275987222 CA402536959 |
465 | P>T | No |
ClinGen gnomAD |
|
CA402536974 rs757173296 |
466 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA300873556 rs952655555 |
467 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
COSM3403582 CA8975691 COSM3403583 rs781089843 RCV001218577 |
467 | R>H | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
COSM989198 rs1199827684 CA402536994 COSM989196 |
468 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs778955783 CA8975694 |
469 | A>T | No |
ClinGen ExAC gnomAD |
|
CA402537036 rs1191226455 |
470 | V>A | No |
ClinGen gnomAD |
|
rs1601494571 CA402537072 |
473 | T>P | No |
ClinGen Ensembl |
|
TCGA novel | 479 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA402537263 rs1464565097 |
484 | P>R | No |
ClinGen gnomAD |
|
CA402537270 rs1172516695 |
485 | Y>H | No |
ClinGen gnomAD |
|
CA402537295 rs1601494837 |
486 | N>K | No |
ClinGen Ensembl |
|
rs965302278 CA402537291 |
486 | N>T | No |
ClinGen gnomAD |
|
rs920960768 CA300873595 |
490 | P>S | No |
ClinGen Ensembl |
|
rs1339486932 CA402537359 |
491 | Q>H | No |
ClinGen gnomAD |
|
rs368215092 CA8975700 |
493 | K>I | No |
ClinGen ESP ExAC gnomAD |
|
rs932312871 CA300873603 |
493 | K>N | No |
ClinGen Ensembl |
|
rs764949955 CA8975702 |
496 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
VAR_023416 | 497 | S>R | No | UniProt | |
RCV001067693 rs752290215 CA8975703 |
498 | F>L | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1347015954 CA402537445 |
500 | P>L | No |
ClinGen gnomAD |
|
CA402537447 rs1214237303 |
501 | P>A | No |
ClinGen gnomAD |
|
RCV001053873 CA402537456 rs1463349898 |
502 | G>D | No |
ClinGen ClinVar TOPMed dbSNP |
|
CA8975705 rs763660568 |
502 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA300873613 rs1027863827 |
504 | E>K | No |
ClinGen TOPMed gnomAD |
|
rs1264050049 CA402537479 |
505 | M>I | No |
ClinGen gnomAD |
|
CA402537477 rs1330683051 |
505 | M>T | No |
ClinGen TOPMed |
|
rs1431514902 CA402537484 |
506 | R>K | No |
ClinGen gnomAD |
|
rs199582650 RCV001207072 |
510 | N>K | No |
ClinVar dbSNP |
|
rs755796418 CA8975710 |
511 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs748435237 CA300873629 |
512 | R>G | No |
ClinGen ExAC gnomAD |
|
CA402537538 rs1433412051 |
515 | F>I | No |
ClinGen TOPMed |
|
rs1433412051 CA402537539 |
515 | F>L | No |
ClinGen TOPMed |
|
CA8975714 rs367988272 |
516 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8975713 rs375787954 |
516 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1357877128 CA402537863 |
518 | H>R | No |
ClinGen TOPMed |
|
rs1175477617 CA402537889 |
519 | N>S | No |
ClinGen TOPMed |
|
CA402537963 RCV001327078 rs1373145711 |
523 | T>A | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs757228161 CA8975733 |
526 | E>D | No |
ClinGen ExAC gnomAD |
|
rs1020866073 CA300877228 |
529 | R>C | No |
ClinGen TOPMed |
|
rs781320191 CA8975734 |
532 | F>I | No |
ClinGen ExAC gnomAD |
|
rs375470869 CA8975736 |
535 | H>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs375470869 CA402539963 |
535 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs369952868 CA402539984 |
536 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 537 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1247652122 CA402540007 |
537 | R>Q | No |
ClinGen TOPMed |
|
CA402540013 rs1330066921 |
538 | S>T | No |
ClinGen gnomAD |
|
rs768327011 CA8975739 |
543 | N>K | No |
ClinGen ExAC gnomAD |
|
CA8975740 rs773924900 |
545 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV001034495 rs2043605578 |
546 | D>N | No |
ClinVar dbSNP |
|
TCGA novel | 554 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1363464019 RCV001213998 CA402540818 |
556 | E>K | No |
ClinGen ClinVar TOPMed dbSNP |
|
rs928322241 CA402540835 |
557 | R>G | No |
ClinGen TOPMed |
|
CA402540876 rs1447932275 |
558 | I>T | No |
ClinGen TOPMed |
|
rs958611451 CA300878477 |
559 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
rs757470144 CA8975767 |
563 | R>G | No |
ClinGen ExAC gnomAD |
|
rs767730323 CA8975768 |
563 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1188940410 CA402540972 |
564 | T>A | No |
ClinGen gnomAD |
|
TCGA novel | 565 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA402541016 rs1175391326 |
566 | Y>F | No |
ClinGen gnomAD |
|
rs1358411238 CA402541051 |
569 | H>R | No |
ClinGen gnomAD |
|
rs887793226 CA300878513 |
570 | N>Y | No |
ClinGen TOPMed |
|
CA8975795 rs755945721 |
572 | K>R | No |
ClinGen ExAC |
|
rs2044795067 RCV001240286 |
574 | T>S | No |
ClinVar dbSNP |
|
rs558613835 CA300884274 |
582 | Q>K | No |
ClinGen Ensembl |
|
rs755525575 CA8975796 |
586 | I>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 588 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA300884287 rs777517791 |
589 | P>L | No |
ClinGen TOPMed |
|
TCGA novel | 590 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA300888873 rs796959222 |
595 | R>* | No |
ClinGen Ensembl |
|
CA300888875 rs1056763634 |
595 | R>S | No |
ClinGen TOPMed |
|
CA8975827 rs768443117 |
596 | E>G | No |
ClinGen ExAC |
|
rs1253068633 CA402545766 |
596 | E>Q | No |
ClinGen gnomAD |
|
rs915663591 CA300888880 |
601 | Y>C | No |
ClinGen Ensembl |
|
CA300888886 rs868256982 |
602 | D>G | No |
ClinGen TOPMed |
|
CA300888892 rs867236078 |
604 | F>L | No |
ClinGen Ensembl |
|
CA402545955 rs1447314156 |
606 | K>R | No |
ClinGen gnomAD |
|
rs2045860030 RCV001241056 |
607 | K>T | No |
ClinVar dbSNP |
|
TCGA novel | 608 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV000813465 CA8975829 rs371275002 |
608 | L>I | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA402546007 rs1166999309 |
609 | K>E | No |
ClinGen gnomAD |
|
CA300888922 rs867623207 |
611 | P>H | No |
ClinGen Ensembl |
|
rs1205835052 CA402546449 |
616 | N>S | No |
ClinGen gnomAD |
|
rs755715125 RCV001312884 CA8975842 |
617 | R>K | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs889611933 CA300890000 |
620 | M>I | No |
ClinGen TOPMed |
|
TCGA novel | 622 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA300890005 rs1028712687 |
623 | H>R | No |
ClinGen Ensembl |
|
CA8975843 rs779651708 |
625 | N>S | No |
ClinGen ExAC gnomAD |
|
rs1601746027 CA402546730 |
627 | I>V | No |
ClinGen Ensembl |
|
rs763159512 COSM3701386 COSM3701385 CA300890022 |
630 | E>Q | liver [Cosmic] | No |
ClinGen cosmic curated gnomAD |
COSM989202 rs748722766 CA8975844 COSM989204 |
633 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
COSM276297 CA402546856 rs1455899867 |
633 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
CA8975845 rs754961615 |
635 | I>M | No |
ClinGen ExAC gnomAD |
|
CA402546962 rs1426839029 |
636 | M>I | No |
ClinGen TOPMed |
|
CA402547007 rs201102807 |
638 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs201102807 CA8975848 |
638 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA402547053 rs1387971746 |
640 | R>K | No |
ClinGen gnomAD |
|
rs1439431266 CA402547070 |
641 | P>A | No |
ClinGen gnomAD |
|
rs1326570206 CA402547084 |
641 | P>L | No |
ClinGen gnomAD |
|
CA402547227 rs1601746398 |
647 | R>T | No |
ClinGen Ensembl |
|
rs2046079725 RCV001034113 |
650 | I>T | No |
ClinVar dbSNP |
|
TCGA novel | 652 | F>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1305985187 CA402547527 |
657 | G>R | No |
ClinGen gnomAD |
|
rs1207997677 CA402547583 |
659 | D>N | No |
ClinGen TOPMed |
|
CA402547722 rs1201550915 |
662 | G>V | No |
ClinGen TOPMed |
|
CA402547908 rs532706423 |
667 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs532706423 CA8975854 |
667 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA402547966 rs1601746717 |
668 | F>V | No |
ClinGen Ensembl |
|
CA402548281 rs1324147255 |
677 | N>D | No |
ClinGen TOPMed |
|
CA402548408 rs1177274433 |
680 | Y>F | No |
ClinGen gnomAD |
|
rs2046085665 RCV001036196 |
682 | L>F | No |
ClinVar dbSNP |
|
rs1242344932 | 688 | T>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8975857 rs565332359 |
688 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA402548613 rs1160840546 RCV001068984 |
688 | T>M | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA8975876 rs773646297 |
691 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA300891030 rs11152067 |
692 | T>P | No |
ClinGen Ensembl |
|
CA8975877 rs377143286 |
698 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1060503574 CA16616083 RCV000457922 |
700 | G>A | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs753495237 CA8975879 |
713 | I>V | No |
ClinGen ExAC |
|
rs1354543402 CA402549926 |
716 | V>I | No |
ClinGen gnomAD |
|
rs1255475882 CA402549940 |
718 | G>C | No |
ClinGen TOPMed |
|
CA8975882 rs764634193 |
721 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 724 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA402549984 rs1218196440 |
725 | K>T | No |
ClinGen TOPMed |
|
CA8975901 rs762385384 |
729 | G>D | No |
ClinGen ExAC gnomAD |
|
rs1568877918 CA402550848 |
732 | I>T | No |
ClinGen Ensembl |
|
TCGA novel | 732 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs904466003 CA402550989 |
736 | Y>* | No |
ClinGen TOPMed |
|
rs1568878110 CA402551058 |
738 | M>K | No |
ClinGen Ensembl |
|
rs1335588465 CA402551093 |
739 | M>I | No |
ClinGen TOPMed gnomAD |
|
CA8975902 rs764108399 |
739 | M>T | No |
ClinGen ExAC gnomAD |
|
rs1172972866 CA402551079 |
739 | M>V | No |
ClinGen TOPMed |
|
rs1235631582 CA402551185 |
743 | Q>E | No |
ClinGen gnomAD |
|
CA402551228 rs1420987841 |
745 | T>I | No |
ClinGen TOPMed |
|
RCV001299424 rs2046707609 |
748 | D>E | No |
ClinVar dbSNP |
|
rs757213039 CA8975904 |
750 | E>Q | No |
ClinGen ExAC gnomAD |
|
CA402552738 rs755901908 |
755 | E>D | No |
ClinGen ExAC gnomAD |
|
CA300894488 rs866791282 |
760 | L>F | No |
ClinGen Ensembl |
|
rs1333490797 CA402552913 |
767 | D>E | No |
ClinGen TOPMed |
|
rs2047124967 RCV001070905 |
769 | T>I | No |
ClinVar dbSNP |
|
rs757736499 CA8975930 |
774 | M>T | No |
ClinGen ExAC gnomAD |
|
rs747066497 CA8975929 |
774 | M>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 775 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV001045594 rs2047126755 |
777 | I>R | No |
ClinVar dbSNP |
|
rs1182242080 CA402553085 |
779 | E>V | No |
ClinGen gnomAD |
|
TCGA novel | 780 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs2047127716 RCV001352221 |
781 | N>T | No |
ClinVar dbSNP |
|
CA402553156 rs1186015726 |
783 | G>E | No |
ClinGen gnomAD |
|
rs1392435209 CA402555057 |
785 | T>I | No |
ClinGen gnomAD |
|
rs1311964841 CA402555068 |
787 | Q>* | No |
ClinGen gnomAD |
|
rs1375665998 CA402555103 |
792 | P>T | No |
ClinGen gnomAD |
|
rs2048579090 RCV001240595 |
793 | N>D | No |
ClinVar dbSNP |
|
CA8975940 rs773223658 |
793 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA300901328 rs537233805 |
797 | I>T | No |
ClinGen 1000Genomes |
|
CA8975943 rs753666609 |
798 | M>I | No |
ClinGen ExAC gnomAD |
|
CA8975942 rs766319722 |
798 | M>V | No |
ClinGen ExAC gnomAD |
|
rs1271790462 CA402555157 |
800 | T>S | No |
ClinGen gnomAD |
|
rs2048580915 RCV001214420 |
801 | N>S | No |
ClinVar dbSNP |
|
rs1345548153 | 808 | I>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
CA300901364 rs868820698 RCV001229033 |
809 | D>N | No |
ClinGen ClinVar TOPMed dbSNP |
|
rs768223994 CA8975954 |
821 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs747621156 CA8975956 |
823 | Q>P | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 825 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1254034796 CA402556436 RCV001347526 |
826 | A>T | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs1435206195 CA402556486 |
829 | E>A | No |
ClinGen gnomAD |
|
rs771000842 CA8975986 |
835 | L>F | No |
ClinGen ExAC gnomAD |
|
rs1483555632 CA402557723 |
836 | P>R | No |
ClinGen gnomAD |
|
TCGA novel | 836 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 843 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA402557846 rs1206863482 |
843 | F>S | No |
ClinGen gnomAD |
|
rs1254959337 CA402557873 |
844 | D>H | No |
ClinGen gnomAD |
|
CA402557924 rs1485093870 |
846 | N>I | No |
ClinGen gnomAD |
|
CA402557955 rs1325841919 RCV001034352 |
847 | E>D | No |
ClinGen ClinVar TOPMed dbSNP |
|
CA402557960 rs370069597 |
848 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA300903892 rs868171621 |
849 | E>D | No |
ClinGen Ensembl |
|
COSM989214 RCV000811711 COSM989216 rs1185926634 CA402558322 |
854 | G>S | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar NCI-TCGA dbSNP gnomAD |
rs867279787 CA300905036 |
856 | G>S | No |
ClinGen TOPMed |
|
CA8975998 rs765670927 |
859 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs752957596 CA8975999 |
861 | N>D | No |
ClinGen ExAC |
|
CA8976000 rs369608371 |
868 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1168031232 CA402558758 |
870 | K>R | No |
ClinGen TOPMed |
|
CA402558803 rs141136641 |
871 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA402558791 rs1434358999 |
871 | N>S | No |
ClinGen gnomAD |
|
rs756886193 CA8976003 |
873 | Y>* | No |
ClinGen ExAC gnomAD |
|
RCV001221615 rs2049446731 |
874 | C>F | No |
ClinVar dbSNP |
|
rs1288858218 CA402558871 |
874 | C>G | No |
ClinGen gnomAD |
|
CA402558866 rs1288858218 |
874 | C>S | No |
ClinGen gnomAD |
|
RCV001221616 rs2049446994 |
875 | P>Q | No |
ClinVar dbSNP |
|
CA402558919 rs1602027384 |
876 | N>T | No |
ClinGen Ensembl |
|
CA402558939 rs1602027464 |
877 | H>P | No |
ClinGen Ensembl |
|
CA300905083 rs907217983 RCV001242297 |
879 | V>I | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1347550161 CA402559029 |
881 | Q>E | No |
ClinGen gnomAD |
|
CA8976005 rs745860270 |
882 | W>R | No |
ClinGen ExAC gnomAD |
|
rs769594334 RCV001070995 CA8976006 |
882 | W>S | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA402559882 rs1163473159 |
888 | L>V | No |
ClinGen gnomAD |
|
CA402559923 rs1325978327 |
890 | M>T | No |
ClinGen gnomAD |
|
rs1168844852 CA402559912 |
890 | M>V | No |
ClinGen TOPMed |
|
CA402560020 rs1288511463 |
894 | K>N | No |
ClinGen gnomAD |
|
CA402560087 rs1470762714 |
898 | L>F | No |
ClinGen TOPMed |
|
rs1292654849 CA402560150 |
901 | F>C | No |
ClinGen gnomAD |
|
TCGA novel | 907 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA402560270 rs1436959214 |
907 | R>Q | No |
ClinGen gnomAD |
|
CA402560321 rs1261299378 |
910 | M>V | No |
ClinGen gnomAD |
|
rs1484104502 CA402560430 |
915 | E>Q | No |
ClinGen gnomAD |
|
rs753835514 CA8976043 |
917 | Y>H | No |
ClinGen ExAC gnomAD |
|
CA8976055 RCV001037339 rs775681701 |
920 | N>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1382744717 CA402561751 |
926 | T>K | No |
ClinGen TOPMed |
|
rs1468279486 CA402561775 |
927 | I>K | No |
ClinGen TOPMed |
|
rs757461439 CA8976056 |
927 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs531389307 CA8976057 |
929 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA402561938 rs1568950112 |
932 | S>N | No |
ClinGen Ensembl |
|
rs2049836298 RCV001317763 |
933 | P>R | No |
ClinVar dbSNP |
|
rs1429073619 CA402562061 |
934 | E>K | No |
ClinGen gnomAD |
|
rs367735608 RCV001223918 CA8976060 |
939 | A>T | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1322381885 CA402563899 |
945 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA402563922 rs1251263482 |
947 | D>N | No |
ClinGen TOPMed |
|
CA402564005 rs1229542194 |
950 | P>L | No |
ClinGen TOPMed |
|
CA402564013 rs1385995724 |
951 | Y>H | No |
ClinGen gnomAD |
|
CA402564073 rs1344759824 |
953 | T>I | No |
ClinGen TOPMed |
|
CA402564096 rs1331871223 |
955 | E>Q | No |
ClinGen gnomAD |
|
CA402564127 rs1313116312 |
956 | D>V | No |
ClinGen TOPMed |
|
CA402564151 rs1235646670 |
957 | L>F | No |
ClinGen gnomAD |
|
rs1341135583 CA402564193 |
959 | E>D | No |
ClinGen TOPMed |
|
CA402564235 rs1568964410 |
962 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
rs1209912013 CA402564255 |
963 | M>L | No |
ClinGen TOPMed gnomAD |
|
RCV001301068 rs2050478920 |
964 | A>missing | No |
ClinVar dbSNP |
|
CA300910200 rs868105527 |
964 | A>V | No |
ClinGen Ensembl |
|
rs780305583 CA8976073 |
965 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 968 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA402564378 rs1209581955 |
968 | A>V | No |
ClinGen gnomAD |
|
CA402564383 rs1434566598 |
969 | Q>E | No |
ClinGen gnomAD |
|
rs1188324271 CA402564413 |
970 | G>E | No |
ClinGen gnomAD |
1 associated diseases with Q96PU5
[MIM: 617201]: Periventricular nodular heterotopia 7 (PVNH7)
A form of periventricular nodular heterotopia, a disorder resulting from a defect in the pattern of neuronal migration in which ectopic collections of neurons lie along the lateral ventricles of the brain or just beneath, contiguously or in isolated patches. PVNH7 is an autosomal dominant disease characterized by delayed psychomotor development, intellectual disability, and seizures in some patients. Additional features include cleft palate and toe syndactyly. {ECO:0000269|PubMed:27694961}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A form of periventricular nodular heterotopia, a disorder resulting from a defect in the pattern of neuronal migration in which ectopic collections of neurons lie along the lateral ventricles of the brain or just beneath, contiguously or in isolated patches. PVNH7 is an autosomal dominant disease characterized by delayed psychomotor development, intellectual disability, and seizures in some patients. Additional features include cleft palate and toe syndactyly. {ECO:0000269|PubMed:27694961}. Note=The disease is caused by variants affecting the gene represented in this entry.
1 regional properties for Q96PU5
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | Small GTP-binding protein domain | 15 - 135 | IPR005225 |
Functions
Description | ||
---|---|---|
EC Number | 2.3.2.26 | Aminoacyltransferases |
Subcellular Localization |
|
|
PANTHER Family | ||
PANTHER Subfamily | ||
PANTHER Protein Class | ||
PANTHER Pathway Category | No pathway information available |
6 GO annotations of cellular component
Name | Definition |
---|---|
cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
multivesicular body | A type of endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm. |
nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
7 GO annotations of molecular function
Name | Definition |
---|---|
potassium channel inhibitor activity | Binds to and stops, prevents, or reduces the activity of a potassium channel. |
potassium channel regulator activity | Binds to and modulates the activity of a potassium channel. |
sodium channel inhibitor activity | Binds to and stops, prevents, or reduces the activity of a sodium channel. |
sodium channel regulator activity | Binds to and modulates the activity of a sodium channel. |
transmembrane transporter binding | Binding to a transmembrane transporter, a protein or protein complex that enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
ubiquitin protein ligase activity | Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues. |
ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. |
23 GO annotations of biological process
Name | Definition |
---|---|
cell differentiation | The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. |
ion transmembrane transport | A process in which an ion is transported across a membrane. |
negative regulation of potassium ion transmembrane transport | Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transport. |
negative regulation of potassium ion transmembrane transporter activity | Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transporter activity. |
negative regulation of protein localization to cell surface | Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to the cell surface. |
negative regulation of sodium ion transmembrane transport | Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transport. |
negative regulation of sodium ion transmembrane transporter activity | Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transporter activity. |
positive regulation of caveolin-mediated endocytosis | Any process that activates or increases the frequency, rate or extent of caveolin-mediated endocytosis. |
positive regulation of dendrite extension | Any process that activates or increases the frequency, rate or extent of dendrite extension. |
proteasome-mediated ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome. |
protein K48-linked ubiquitination | A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation. |
protein polyubiquitination | Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain. |
protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
regulation of dendrite morphogenesis | Any process that modulates the frequency, rate or extent of dendrite morphogenesis. |
regulation of ion transmembrane transport | Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. |
regulation of membrane depolarization | Any process that modulates the rate, frequency or extent of membrane depolarization. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. |
regulation of membrane potential | Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane. |
regulation of membrane repolarization | Any process that modulates the establishment or extent of a membrane potential in the polarizing direction towards the resting potential, usually from positive to negative. |
regulation of potassium ion transmembrane transporter activity | Any process that modulates the frequency, rate or extent of potassium ion transmembrane transporter activity. |
regulation of protein stability | Any process that affects the structure and integrity of a protein, altering the likelihood of its degradation or aggregation. |
regulation of sodium ion transmembrane transport | Any process that modulates the frequency, rate or extent of sodium ion transmembrane transport. |
ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. |
ventricular cardiac muscle cell action potential | An action potential that occurs in a ventricular cardiac muscle cell. |
23 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
P39940 | RSP5 | E3 ubiquitin-protein ligase RSP5 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
Q9Y0H4 | Su(dx) | E3 ubiquitin-protein ligase Su | Drosophila melanogaster (Fruit fly) | SS |
Q9V853 | Smurf | E3 ubiquitin-protein ligase Smurf1 | Drosophila melanogaster (Fruit fly) | SS |
O95817 | BAG3 | BAG family molecular chaperone regulator 3 | Homo sapiens (Human) | PR |
O60861 | GAS7 | Growth arrest-specific protein 7 | Homo sapiens (Human) | PR |
Q9HCE7 | SMURF1 | E3 ubiquitin-protein ligase SMURF1 | Homo sapiens (Human) | PR |
Q9HAU4 | SMURF2 | E3 ubiquitin-protein ligase SMURF2 | Homo sapiens (Human) | EV |
Q9H0M0 | WWP1 | NEDD4-like E3 ubiquitin-protein ligase WWP1 | Homo sapiens (Human) | EV |
Q96J02 | ITCH | E3 ubiquitin-protein ligase Itchy homolog | Homo sapiens (Human) | EV |
O00308 | WWP2 | NEDD4-like E3 ubiquitin-protein ligase WWP2 | Homo sapiens (Human) | EV |
P46934 | NEDD4 | E3 ubiquitin-protein ligase NEDD4 | Homo sapiens (Human) | EV |
Q8IYU2 | HACE1 | E3 ubiquitin-protein ligase HACE1 | Homo sapiens (Human) | EV |
P46935 | Nedd4 | E3 ubiquitin-protein ligase NEDD4 | Mus musculus (Mouse) | PR |
Q9CUN6 | Smurf1 | E3 ubiquitin-protein ligase SMURF1 | Mus musculus (Mouse) | PR |
A2A5Z6 | Smurf2 | E3 ubiquitin-protein ligase SMURF2 | Mus musculus (Mouse) | SS |
Q8BZZ3 | Wwp1 | NEDD4-like E3 ubiquitin-protein ligase WWP1 | Mus musculus (Mouse) | SS |
Q60780 | Gas7 | Growth arrest-specific protein 7 | Mus musculus (Mouse) | PR |
Q8C863 | Itch | E3 ubiquitin-protein ligase Itchy | Mus musculus (Mouse) | EV |
Q9DBH0 | Wwp2 | NEDD4-like E3 ubiquitin-protein ligase WWP2 | Mus musculus (Mouse) | SS |
Q8CFI0 | Nedd4l | E3 ubiquitin-protein ligase NEDD4-like | Mus musculus (Mouse) | PR |
Q62940 | Nedd4 | E3 ubiquitin-protein ligase NEDD4 | Rattus norvegicus (Rat) | PR |
Q9N2Z7 | wwp-1 | E3 ubiquitin-protein ligase wwp-1 | Caenorhabditis elegans | SS |
A9JRZ0 | smurf2 | E3 ubiquitin-protein ligase SMURF2 | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
10 | 20 | 30 | 40 | 50 | 60 |
MATGLGEPVY | GLSEDEGESR | ILRVKVVSGI | DLAKKDIFGA | SDPYVKLSLY | VADENRELAL |
70 | 80 | 90 | 100 | 110 | 120 |
VQTKTIKKTL | NPKWNEEFYF | RVNPSNHRLL | FEVFDENRLT | RDDFLGQVDV | PLSHLPTEDP |
130 | 140 | 150 | 160 | 170 | 180 |
TMERPYTFKD | FLLRPRSHKS | RVKGFLRLKM | AYMPKNGGQD | EENSDQRDDM | EHGWEVVDSN |
190 | 200 | 210 | 220 | 230 | 240 |
DSASQHQEEL | PPPPLPPGWE | EKVDNLGRTY | YVNHNNRTTQ | WHRPSLMDVS | SESDNNIRQI |
250 | 260 | 270 | 280 | 290 | 300 |
NQEAAHRRFR | SRRHISEDLE | PEPSEGGDVP | EPWETISEEV | NIAGDSLGLA | LPPPPASPGS |
310 | 320 | 330 | 340 | 350 | 360 |
RTSPQELSEE | LSRRLQITPD | SNGEQFSSLI | QREPSSRLRS | CSVTDAVAEQ | GHLPPPSAPA |
370 | 380 | 390 | 400 | 410 | 420 |
GRARSSTVTG | GEEPTPSVAY | VHTTPGLPSG | WEERKDAKGR | TYYVNHNNRT | TTWTRPIMQL |
430 | 440 | 450 | 460 | 470 | 480 |
AEDGASGSAT | NSNNHLIEPQ | IRRPRSLSSP | TVTLSAPLEG | AKDSPVRRAV | KDTLSNPQSP |
490 | 500 | 510 | 520 | 530 | 540 |
QPSPYNSPKP | QHKVTQSFLP | PGWEMRIAPN | GRPFFIDHNT | KTTTWEDPRL | KFPVHMRSKT |
550 | 560 | 570 | 580 | 590 | 600 |
SLNPNDLGPL | PPGWEERIHL | DGRTFYIDHN | SKITQWEDPR | LQNPAITGPA | VPYSREFKQK |
610 | 620 | 630 | 640 | 650 | 660 |
YDYFRKKLKK | PADIPNRFEM | KLHRNNIFEE | SYRRIMSVKR | PDVLKARLWI | EFESEKGLDY |
670 | 680 | 690 | 700 | 710 | 720 |
GGVAREWFFL | LSKEMFNPYY | GLFEYSATDN | YTLQINPNSG | LCNEDHLSYF | TFIGRVAGLA |
730 | 740 | 750 | 760 | 770 | 780 |
VFHGKLLDGF | FIRPFYKMML | GKQITLNDME | SVDSEYYNSL | KWILENDPTE | LDLMFCIDEE |
790 | 800 | 810 | 820 | 830 | 840 |
NFGQTYQVDL | KPNGSEIMVT | NENKREYIDL | VIQWRFVNRV | QKQMNAFLEG | FTELLPIDLI |
850 | 860 | 870 | 880 | 890 | 900 |
KIFDENELEL | LMCGLGDVDV | NDWRQHSIYK | NGYCPNHPVI | QWFWKAVLLM | DAEKRIRLLQ |
910 | 920 | 930 | 940 | 950 | 960 |
FVTGTSRVPM | NGFAELYGSN | GPQLFTIEQW | GSPEKLPRAH | TCFNRLDLPP | YETFEDLREK |
970 | |||||
LLMAVENAQG | FEGVD |