Q8TDI0
Gene name |
CHD5 |
Protein name |
Chromodomain-helicase-DNA-binding protein 5 |
Names |
CHD-5, ATP-dependent helicase CHD5 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:26038 |
EC number |
3.6.4.12: Acting on ATP; involved in cellular and subcellular movement |
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

2 structures for Q8TDI0
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
6GUU | X-ray | 295 A | A/B | 412-649 | PDB |
AF-Q8TDI0-F1 | Predicted | AlphaFoldDB |
1230 variants for Q8TDI0
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
VAR_087312 | 193 | R>Q | PMNDS [UniProt] | Yes | UniProt |
rs1571164162 VAR_087313 CA338088782 |
193 | R>W | PMNDS [UniProt] | Yes |
ClinGen Ensembl UniProt |
VAR_087314 | 272 | A>V | PMNDS; unknown pathological significance [UniProt] | Yes | UniProt |
VAR_087315 | 314 | E>del | PMNDS [UniProt] | Yes | UniProt |
VAR_087316 | 427 | E>K | PMNDS [UniProt] | Yes | UniProt |
VAR_087317 | 596 | R>del | PMNDS [UniProt] | Yes | UniProt |
VAR_087318 | 912 | S>F | PMNDS [UniProt] | Yes | UniProt |
rs760743983 VAR_087319 COSM168435 CA556537 |
1084 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine PMNDS [NCI-TCGA, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD UniProt |
TCGA novel VAR_087320 |
1124 | P>L | Variant assessed as Somatic; impact. PMNDS [NCI-TCGA, UniProt] | Yes |
NCI-TCGA UniProt |
CA338076336 VAR_087321 rs1162494442 |
1136 | R>H | Variant assessed as Somatic; 5.441e-05 impact. PMNDS [NCI-TCGA, UniProt] | Yes |
ClinGen NCI-TCGA gnomAD UniProt |
VAR_087322 | 1140 | N>I | PMNDS [UniProt] | Yes | UniProt |
CA17153029 VAR_087323 rs371488822 |
1419 | I>M | PMNDS [UniProt] | Yes |
ClinGen ESP ExAC TOPMed gnomAD UniProt |
VAR_087324 | 1488 | D>V | PMNDS [UniProt] | Yes | UniProt |
CA555884 VAR_087325 rs781200968 |
1714 | E>G | PMNDS [UniProt] | Yes |
ClinGen ExAC gnomAD UniProt |
RCV001262899 rs139581412 CA555861 |
1750 | T>M | Neurodevelopmental disorder [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA17144248 rs943382091 |
4 | P>L | No |
ClinGen TOPMed |
|
TCGA novel | 5 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338062784 rs1333950052 |
8 | E>G | No |
ClinGen TOPMed |
|
CA557467 rs777999082 |
9 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1336240806 CA338062776 |
9 | E>V | No |
ClinGen TOPMed gnomAD |
|
CA338062769 rs1471540799 |
10 | E>G | No |
ClinGen TOPMed gnomAD |
|
rs1329647020 CA338062764 |
11 | L>V | No |
ClinGen gnomAD |
|
rs867830198 CA338062754 |
13 | R>G | No |
ClinGen TOPMed gnomAD |
|
CA17144215 rs867830198 |
13 | R>W | No |
ClinGen TOPMed gnomAD |
|
CA17144213 rs987514659 |
14 | L>P | No |
ClinGen TOPMed gnomAD |
|
CA338062745 rs1425517471 |
15 | F>L | No |
ClinGen gnomAD |
|
CA17144207 rs913710576 |
17 | E>A | No |
ClinGen TOPMed gnomAD |
|
rs1364932230 CA338062718 |
18 | E>D | No |
ClinGen gnomAD |
|
CA557466 rs758593833 |
19 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338062707 rs1416866222 |
20 | E>* | No |
ClinGen gnomAD |
|
rs1571179798 CA338062706 |
20 | E>G | No |
ClinGen Ensembl |
|
CA338062695 rs1250408396 |
21 | N>K | No |
ClinGen TOPMed gnomAD |
|
rs1222788379 CA338062689 |
22 | E>G | No |
ClinGen gnomAD |
|
rs753808491 CA557465 |
23 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338062678 rs1253301720 |
24 | E>K | No |
ClinGen TOPMed |
|
rs1208966523 CA338062658 |
26 | S>L | No |
ClinGen TOPMed gnomAD |
|
CA338061555 rs1418326777 |
27 | E>A | No |
ClinGen TOPMed |
|
rs926389285 CA17137135 |
27 | E>D | No |
ClinGen Ensembl |
|
CA557455 rs370334823 |
31 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 32 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1476270696 CA338061456 |
33 | L>F | No |
ClinGen TOPMed |
|
CA557454 rs770335903 |
34 | E>G | No |
ClinGen ExAC gnomAD |
|
CA338061411 rs377478068 |
35 | A>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA557453 rs377478068 |
35 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA338061417 rs1328306817 |
35 | A>T | No |
ClinGen gnomAD |
|
rs146996909 CA557451 |
36 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs777038711 CA557452 |
36 | F>S | No |
ClinGen ExAC gnomAD |
|
rs917617491 CA17137113 |
37 | D>G | No |
ClinGen TOPMed |
|
CA338061383 rs778192266 |
37 | D>H | No |
ClinGen ExAC gnomAD |
|
CA557449 rs778192266 |
37 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
TCGA novel | 38 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1436016933 COSM1686927 CA338061308 |
41 | P>S | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA338061270 rs1381055945 |
43 | E>G | No |
ClinGen gnomAD |
|
rs571052710 CA557447 RCV000914827 |
43 | E>Q | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs552385891 CA557446 |
44 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA17137098 COSM1343735 rs995346223 |
45 | V>A | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
VAR_035475 COSM3361627 CA338061234 COSM32706 rs1470692239 |
45 | V>M | kidney breast a breast cancer sample; somatic mutation [Cosmic, UniProt] | No |
ClinGen cosmic curated UniProt dbSNP gnomAD |
rs1171694675 CA338061205 |
46 | S>R | No |
ClinGen gnomAD |
|
rs750388086 CA557444 |
48 | P>R | No |
ClinGen ExAC gnomAD |
|
rs1301912021 CA338061179 |
49 | K>E | No |
ClinGen TOPMed |
|
CA557443 rs781038373 |
50 | K>E | No |
ClinGen ExAC gnomAD |
|
CA557442 rs757091559 CA338061152 |
50 | K>N | No |
ClinGen ExAC gnomAD |
|
CA557441 rs751162737 |
51 | K>E | No |
ClinGen ExAC gnomAD |
|
rs746370238 CA557440 |
51 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557438 rs964095593 |
52 | K>N | No |
ClinGen TOPMed gnomAD |
|
CA17137091 rs867679567 |
53 | P>L | No |
ClinGen Ensembl |
|
rs762381552 CA557437 |
55 | K>R | No |
ClinGen ExAC gnomAD |
|
rs1325830214 CA338060990 |
58 | E>G | No |
ClinGen gnomAD |
|
rs752261233 CA557436 |
59 | N>D | No |
ClinGen ExAC gnomAD |
|
rs764708277 CA557435 |
59 | N>S | No |
ClinGen ExAC gnomAD |
|
CA17137086 rs975312459 |
61 | C>Y | No |
ClinGen TOPMed |
|
CA17137082 rs373532903 |
64 | K>R | No |
ClinGen ESP TOPMed |
|
rs771401780 CA557433 |
65 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338060860 rs761147748 |
65 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557431 rs761147748 COSM1560540 |
65 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs771401780 CA557432 |
65 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557430 rs201480612 |
66 | K>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
TCGA novel | 67 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs891114415 CA17137052 |
67 | K>R | No |
ClinGen Ensembl |
|
CA338060818 rs1338036350 |
68 | K>T | No |
ClinGen gnomAD |
|
CA557428 rs748119660 |
69 | E>K | No |
ClinGen ExAC gnomAD |
|
rs1292996588 | 70 | G>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
rs1482810915 CA338091336 |
70 | G>E | No |
ClinGen gnomAD |
|
CA557406 rs770868415 |
71 | S>N | No |
ClinGen ExAC gnomAD |
|
rs1320265955 CA338091277 |
73 | D>N | No |
ClinGen gnomAD |
|
TCGA novel | 74 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 76 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1224815568 CA338091174 |
77 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs1312719259 CA338091190 |
77 | E>K | No |
ClinGen gnomAD |
|
CA338091103 rs1374897232 |
80 | E>D | No |
ClinGen gnomAD |
|
rs1231112944 CA338091116 |
80 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA338091101 rs1285833856 |
81 | D>N | No |
ClinGen TOPMed gnomAD |
|
CA17180975 rs996449819 |
82 | L>P | No |
ClinGen TOPMed gnomAD |
|
CA17180971 rs868549386 |
84 | E>* | No |
ClinGen gnomAD |
|
CA338091069 rs868549386 |
84 | E>K | No |
ClinGen gnomAD |
|
CA557405 rs747002991 |
86 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1304561609 CA338091040 |
86 | S>P | No |
ClinGen gnomAD |
|
CA17180961 rs901741189 |
88 | S>N | No |
ClinGen TOPMed |
|
rs778454890 CA557401 |
95 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557402 rs370460601 |
95 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs936580215 CA17180944 COSM3721238 |
97 | K>R | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA557398 rs150931729 |
99 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA338090768 rs756677443 |
100 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557397 rs756677443 |
100 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA17180933 rs991640795 |
103 | L>P | No |
ClinGen TOPMed gnomAD |
|
rs1373588152 CA338090688 |
104 | K>Q | No |
ClinGen gnomAD |
|
rs1323586565 CA338090638 |
105 | D>G | No |
ClinGen gnomAD |
|
rs1284881155 CA338090629 |
106 | K>E | No |
ClinGen gnomAD |
|
CA557393 rs762105742 |
107 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 108 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA557392 rs774590928 |
111 | A>S | No |
ClinGen ExAC gnomAD |
|
CA17180918 rs184576673 |
113 | R>* | No |
ClinGen 1000Genomes TOPMed |
|
CA338090419 rs184576673 |
113 | R>G | No |
ClinGen 1000Genomes TOPMed |
|
CA557390 rs542999319 |
113 | R>Q | Variant assessed as Somatic; 6.4e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
rs1386302592 CA338090365 |
115 | K>N | No |
ClinGen gnomAD |
|
rs937537501 CA17180907 |
115 | K>R | No |
ClinGen TOPMed |
|
CA557389 rs575662511 |
117 | D>H | No |
ClinGen 1000Genomes ExAC |
|
rs575662511 CA17180900 |
117 | D>Y | No |
ClinGen 1000Genomes ExAC |
|
CA338090255 rs1158305877 |
119 | D>E | No |
ClinGen gnomAD |
|
VAR_035476 | 119 | D>N | a breast cancer sample; somatic mutation [UniProt] | No | UniProt |
TCGA novel | 120 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs769924450 CA557388 |
120 | E>K | No |
ClinGen ExAC gnomAD |
|
CA338090208 rs1430060502 |
121 | D>G | No |
ClinGen gnomAD |
|
CA17180889 rs907887218 |
123 | N>S | No |
ClinGen TOPMed |
|
CA557386 rs746915354 |
124 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1165858294 CA338090032 |
129 | K>T | No |
ClinGen TOPMed gnomAD |
|
CA17178959 rs1004932652 |
132 | K>E | No |
ClinGen Ensembl |
|
rs1206177987 CA338089197 |
134 | S>L | No |
ClinGen TOPMed gnomAD |
|
rs1353523965 CA338089184 |
136 | Q>R | No |
ClinGen TOPMed |
|
rs1312174421 CA338089172 |
138 | M>L | No |
ClinGen TOPMed |
|
rs765274899 CA557369 |
138 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 139 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338089161 rs1310465393 |
139 | A>V | No |
ClinGen gnomAD |
|
CA557367 rs773096618 |
140 | E>D | No |
ClinGen ExAC gnomAD |
|
COSM159977 rs1401581688 CA338089160 |
140 | E>K | breast [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA338089144 rs1049080646 |
142 | G>C | No |
ClinGen TOPMed gnomAD |
|
CA338089142 rs1369097319 |
142 | G>D | No |
ClinGen gnomAD |
|
rs1049080646 CA17178893 |
142 | G>S | No |
ClinGen TOPMed gnomAD |
|
rs747840356 CA557364 |
145 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557362 rs748919576 |
146 | V>M | No |
ClinGen ExAC gnomAD |
|
rs779904423 CA557361 |
147 | D>N | No |
ClinGen ExAC gnomAD |
|
CA557360 rs769387538 |
148 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA557357 rs150062924 |
151 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1339962381 CA338089060 |
154 | D>E | No |
ClinGen gnomAD |
|
CA557355 rs117780546 |
157 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs780191237 CA17178835 |
159 | T>N | No |
ClinGen Ensembl |
|
CA338089014 rs1446132439 |
161 | Y>F | No |
ClinGen TOPMed |
|
rs765477546 CA557352 |
162 | K>N | No |
ClinGen ExAC gnomAD |
|
CA338089004 rs1284478278 |
163 | A>T | No |
ClinGen TOPMed |
|
TCGA novel | 166 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338088956 rs1162035103 |
169 | R>M | No |
ClinGen gnomAD |
|
CA338088912 rs1273277772 |
174 | K>R | No |
ClinGen gnomAD |
|
CA557327 rs764129653 |
176 | N>S | No |
ClinGen ExAC |
|
CA557326 rs139233286 |
177 | P>L | No |
ClinGen ESP ExAC TOPMed |
|
rs926957306 CA17178345 |
180 | P>S | No |
ClinGen gnomAD |
|
rs557846811 CA17178343 |
181 | M>V | No |
ClinGen TOPMed |
|
CA338088824 rs1571164175 |
186 | T>N | No |
ClinGen Ensembl |
|
rs1387287471 CA338088818 |
187 | V>G | No |
ClinGen gnomAD |
|
COSM1296625 CA17178341 rs866020323 |
187 | V>I | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
rs1308579765 CA338088797 |
191 | K>R | No |
ClinGen TOPMed |
|
rs922574776 CA17178337 |
194 | E>G | No |
ClinGen Ensembl |
|
rs1372526540 CA338088777 |
194 | E>Q | No |
ClinGen TOPMed |
|
CA17178333 rs1039744677 |
195 | F>V | No |
ClinGen Ensembl |
|
TCGA novel | 196 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1232715298 CA338088760 |
196 | S>T | No |
ClinGen TOPMed gnomAD |
|
rs146062488 CA557321 |
197 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA338088743 rs1171603389 |
199 | N>H | No |
ClinGen gnomAD |
|
CA557320 rs746557410 |
199 | N>K | No |
ClinGen ExAC gnomAD |
|
rs1391771216 CA338088727 |
201 | F>L | No |
ClinGen gnomAD |
|
CA338088722 rs1186608392 |
201 | F>L | No |
ClinGen TOPMed gnomAD |
|
rs1448723300 CA338088720 |
202 | K>E | No |
ClinGen gnomAD |
|
rs149538663 CA557318 |
203 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs920435597 CA17178304 |
205 | S>F | No |
ClinGen Ensembl |
|
rs779249848 CA557316 |
206 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1200082377 CA338088688 |
206 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs749449609 CA557314 |
207 | A>V | No |
ClinGen ExAC gnomAD |
|
CA338088669 rs1226887215 |
208 | A>V | No |
ClinGen gnomAD |
|
rs1365039028 CA338088660 |
209 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA338088652 rs1449629415 |
210 | A>V | No |
ClinGen gnomAD |
|
CA338088643 rs1333162189 |
211 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA338088630 rs1372180404 |
212 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA557309 rs767762669 |
213 | V>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
rs767762669 CA338088621 |
213 | V>G | No |
ClinGen ExAC TOPMed |
|
rs758404905 CA557307 |
215 | A>T | No |
ClinGen ExAC gnomAD |
|
rs1385833924 CA338088604 |
215 | A>V | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 217 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA557304 rs759393769 |
218 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557303 rs372515565 |
219 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA557300 rs772696978 |
223 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs772696978 CA17178260 |
223 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1322542634 CA338088513 |
224 | P>A | No |
ClinGen TOPMed gnomAD |
|
rs1322542634 CA338088512 |
224 | P>S | No |
ClinGen TOPMed gnomAD |
|
rs771637239 CA557299 |
225 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338088502 rs1230512841 |
225 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA17178234 COSM3705957 rs1034284360 |
228 | V>I | Variant assessed as Somatic; 4.729e-05 impact. liver [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
rs780078526 CA557294 |
230 | P>H | No |
ClinGen ExAC gnomAD |
|
rs376898938 CA17178218 |
231 | P>A | No |
ClinGen ESP |
|
CA557293 rs370035599 COSM535780 |
231 | P>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs766709340 | 232 | Q>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
rs781385165 CA557290 |
232 | Q>H | No |
ClinGen ExAC |
|
CA338088396 rs1472944465 |
233 | V>G | No |
ClinGen TOPMed gnomAD |
|
CA17178191 rs757461454 |
233 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557289 rs757461454 |
233 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557287 rs765294822 |
234 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1180278686 CA338088386 |
234 | P>T | No |
ClinGen gnomAD |
|
CA557286 rs754661119 |
235 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs1320403703 CA338088357 |
237 | V>M | No |
ClinGen gnomAD |
|
rs753681850 CA557285 |
239 | I>L | No |
ClinGen ExAC gnomAD |
|
rs965603223 CA17178163 |
240 | R>C | No |
ClinGen TOPMed |
|
CA557284 rs149780291 |
240 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA338088326 rs965603223 |
240 | R>S | No |
ClinGen TOPMed |
|
CA557282 rs772891328 |
246 | E>K | No |
ClinGen ExAC gnomAD |
|
rs1321689876 CA338088225 |
247 | G>S | No |
ClinGen TOPMed |
|
rs1434246662 CA338088212 |
248 | K>R | No |
ClinGen gnomAD |
|
TCGA novel | 249 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 250 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA557263 rs201483063 |
258 | G>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA557264 rs750032524 |
258 | G>S | No |
ClinGen ExAC gnomAD |
|
CA17176777 rs201483063 |
258 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA557261 rs140726881 |
259 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA338087508 rs1390505261 |
261 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA338087498 rs1373605926 |
261 | D>V | No |
ClinGen TOPMed |
|
rs763482119 CA557259 |
263 | K>N | No |
ClinGen ExAC gnomAD |
|
COSM179392 CA557258 rs759139485 |
271 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs1008928617 CA17176760 |
272 | A>S | No |
ClinGen TOPMed gnomAD |
|
CA557255 rs150572969 COSM1248216 CA557254 |
273 | G>R | oesophagus [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
TCGA novel | 275 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1000382138 CA17176757 |
277 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA557252 rs777905560 |
277 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs903564985 CA17176753 |
279 | G>R | No |
ClinGen TOPMed gnomAD |
|
CA557249 rs755867591 CA557248 |
280 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1304823433 | 281 | I>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
CA338087231 rs1484509736 |
282 | S>I | No |
ClinGen TOPMed |
|
CA557247 rs750227062 |
282 | S>R | No |
ClinGen ExAC gnomAD |
|
CA557246 rs780767406 |
283 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557245 rs756897096 |
284 | K>E | No |
ClinGen ExAC gnomAD |
|
rs751250623 CA557244 |
288 | G>S | No |
ClinGen ExAC gnomAD |
|
rs773723773 CA557242 |
290 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557217 rs761143686 |
291 | S>N | No |
ClinGen ExAC gnomAD |
|
CA338086556 rs1401894338 |
293 | E>D | No |
ClinGen TOPMed |
|
CA557216 CA17175968 rs267598682 |
294 | D>E | No |
ClinGen ExAC |
|
rs267598681 CA17175960 |
295 | E>* | No |
ClinGen Ensembl |
|
CA557214 rs767641232 COSM911258 |
296 | R>S | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA338086462 rs1477375151 |
299 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs774283774 CA557212 |
300 | D>A | No |
ClinGen ExAC gnomAD |
|
CA338086439 rs9434711 |
301 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs140594423 CA557209 |
303 | S>R | No |
ClinGen ESP |
|
rs768430028 CA557208 COSM911257 |
304 | A>T | Variant assessed as Somatic; 0.0001387 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs544143020 CA557207 |
305 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1460525269 CA338086378 |
307 | H>R | No |
ClinGen gnomAD |
|
rs770668383 CA557206 |
308 | S>G | No |
ClinGen ExAC gnomAD |
|
CA338086345 rs1160932350 |
310 | S>F | No |
ClinGen gnomAD |
|
CA338086340 rs1363035377 |
311 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs532035771 CA557204 |
312 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs779247363 CA557203 |
312 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338086325 rs1235633072 |
313 | S>P | No |
ClinGen TOPMed |
|
CA338086315 rs754586094 |
314 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557200 rs754586094 |
314 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1268773844 CA338086299 |
315 | C>F | No |
ClinGen gnomAD |
|
rs767024877 CA557198 |
316 | S>F | No |
ClinGen ExAC gnomAD |
|
rs1256723626 CA338086293 |
316 | S>P | No |
ClinGen gnomAD |
|
rs750769067 CA557196 |
319 | L>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 320 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA17175920 rs199924699 |
323 | S>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA557195 rs199924699 |
323 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA338086232 rs199924699 |
323 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1483949061 CA338086207 |
325 | R>S | No |
ClinGen gnomAD |
|
CA557194 rs377603924 |
326 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
COSM179387 CA557193 rs751854770 |
327 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA338086193 rs751854770 |
327 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763049065 CA557191 |
327 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA557192 rs763049065 |
327 | R>L | No |
ClinGen ExAC gnomAD |
|
rs1321915524 CA338086168 COSM3805685 |
329 | K>N | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
CA338086171 rs1388775566 |
329 | K>R | No |
ClinGen TOPMed gnomAD |
|
CA338086151 rs1455169102 |
331 | R>K | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 331 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs776484404 CA557190 |
332 | I>V | No |
ClinGen ExAC gnomAD |
|
rs1014635388 CA17174599 |
333 | D>V | No |
ClinGen TOPMed |
|
TCGA novel | 335 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1372674175 CA338085914 |
335 | G>S | No |
ClinGen TOPMed |
|
rs774082049 CA338085903 |
336 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs914145567 CA17174583 |
337 | G>S | No |
ClinGen TOPMed gnomAD |
|
CA338085863 rs1557554130 |
342 | H>R | No |
ClinGen Ensembl |
|
TCGA novel | 347 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 349 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338085792 rs1311864850 |
351 | Q>R | No |
ClinGen gnomAD |
|
CA338085785 rs1557554105 |
352 | G>D | No |
ClinGen Ensembl |
|
CA557164 rs558877285 |
352 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
TCGA novel | 354 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338085761 rs1372162079 |
356 | I>V | No |
ClinGen gnomAD |
|
rs1435656050 CA338085741 COSM1343730 |
359 | D>N | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
rs746309035 CA557161 |
362 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA338085712 rs1557554072 |
363 | R>K | No |
ClinGen Ensembl |
|
CA338085708 rs1187484434 |
364 | A>T | No |
ClinGen gnomAD |
|
rs1254343815 CA338085698 |
365 | Y>C | No |
ClinGen gnomAD |
|
rs778168292 CA557157 |
369 | C>Y | No |
ClinGen ExAC gnomAD |
|
rs528747250 CA557156 |
371 | D>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA338085653 rs1408037198 |
372 | P>S | No |
ClinGen TOPMed |
|
CA557154 rs765209995 |
374 | L>V | No |
ClinGen ExAC gnomAD |
|
CA557153 rs755109010 |
377 | A>S | No |
ClinGen ExAC gnomAD |
|
rs767495411 CA557151 |
379 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1325443411 CA338085603 |
380 | G>S | No |
ClinGen gnomAD |
|
rs1032714700 CA17174528 |
381 | K>Q | No |
ClinGen Ensembl |
|
rs761646495 CA557150 |
383 | S>T | No |
ClinGen ExAC gnomAD |
|
rs774278917 CA557149 |
384 | C>G | No |
ClinGen ExAC gnomAD |
|
rs774278917 CA338085573 |
384 | C>R | No |
ClinGen ExAC gnomAD |
|
rs1571160605 CA338085571 |
384 | C>S | No |
ClinGen Ensembl |
|
TCGA novel | 385 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1232024535 CA338085533 |
388 | E>Q | No |
ClinGen gnomAD |
|
TCGA novel | 395 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA557125 rs776199928 |
396 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338085467 rs776199928 |
396 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1270677882 CA338085465 |
397 | K>E | No |
ClinGen gnomAD |
|
CA557123 rs747491646 |
399 | D>Y | No |
ClinGen ExAC gnomAD |
|
CA17174372 rs773732605 |
400 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1453242840 CA338085443 |
400 | D>N | No |
ClinGen gnomAD |
|
CA17174370 rs981376427 |
403 | E>Q | No |
ClinGen TOPMed |
|
rs1258970596 CA338085389 |
407 | G>D | No |
ClinGen gnomAD |
|
rs150785441 CA557117 |
407 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1483342274 CA338085357 |
410 | E>K | No |
ClinGen gnomAD |
|
rs1238826843 CA338085342 |
411 | E>K | No |
ClinGen gnomAD |
|
CA17174349 rs951751222 |
412 | E>A | No |
ClinGen TOPMed gnomAD |
|
rs780153511 CA557114 |
412 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338085302 rs751499625 |
414 | D>H | No |
ClinGen ExAC gnomAD |
|
rs751499625 CA557110 |
414 | D>N | No |
ClinGen ExAC gnomAD |
|
rs751499625 CA557109 |
414 | D>Y | No |
ClinGen ExAC gnomAD |
|
rs1248741346 CA338085288 |
415 | H>Y | No |
ClinGen TOPMed |
|
CA338085279 rs1483624105 |
416 | M>L | No |
ClinGen TOPMed |
|
rs777855759 CA338085228 |
420 | R>C | No |
ClinGen ExAC gnomAD |
|
CA557108 rs777855759 |
420 | R>G | No |
ClinGen ExAC gnomAD |
|
rs375577706 CA557107 |
421 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA338085190 rs1314998243 |
423 | K>R | No |
ClinGen TOPMed gnomAD |
|
CA338085192 rs1314998243 |
423 | K>T | No |
ClinGen TOPMed gnomAD |
|
rs148051969 CA557104 |
424 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs765007504 CA557105 |
424 | D>G | No |
ClinGen ExAC gnomAD |
|
rs765825151 CA557102 |
425 | G>R | No |
ClinGen ExAC gnomAD |
|
rs1485231148 CA338084980 |
441 | H>P | No |
ClinGen gnomAD |
|
TCGA novel | 443 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs200120769 CA17174281 |
444 | N>S | No |
ClinGen ExAC gnomAD |
|
CA557096 rs200120769 |
444 | N>T | No |
ClinGen ExAC gnomAD |
|
rs768943855 CA557095 |
446 | P>T | No |
ClinGen ExAC gnomAD |
|
CA17174269 rs1009562776 |
448 | P>R | No |
ClinGen TOPMed gnomAD |
|
CA338084883 rs1226874121 |
449 | E>K | No |
ClinGen gnomAD |
|
rs1323890779 CA338084824 |
452 | N>D | No |
ClinGen gnomAD |
|
CA338084801 rs1467681403 |
453 | G>C | No |
ClinGen TOPMed |
|
CA338084726 rs1362127459 |
456 | L>V | No |
ClinGen TOPMed |
|
CA557093 rs780448929 |
457 | C>Y | No |
ClinGen ExAC gnomAD |
|
CA338084612 rs1437377798 |
461 | T>A | No |
ClinGen gnomAD |
|
rs749050123 CA557065 |
464 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557064 rs779883746 |
466 | K>E | No |
ClinGen ExAC gnomAD |
|
rs868145919 CA17173201 |
467 | G>D | No |
ClinGen Ensembl |
|
rs755760822 CA557063 |
468 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557061 rs527562697 |
471 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
CA557062 rs750119008 |
471 | R>W | No |
ClinGen ExAC gnomAD |
|
CA338083664 rs1327140374 |
474 | H>Y | No |
ClinGen gnomAD |
|
rs1272391617 CA338083637 |
476 | R>T | No |
ClinGen TOPMed |
|
rs1373892922 CA338083618 |
477 | W>* | No |
ClinGen gnomAD |
|
rs1341771058 CA338083615 |
478 | T>A | No |
ClinGen TOPMed |
|
CA338083612 rs148974462 |
478 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA557059 rs148974462 |
478 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1313195110 CA338083608 |
479 | E>K | No |
ClinGen gnomAD |
|
CA557057 rs150260986 |
480 | P>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs150260986 CA17173183 |
480 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1380126630 CA338083580 |
482 | A>S | No |
ClinGen gnomAD |
|
CA17173164 rs925143700 |
482 | A>V | No |
ClinGen TOPMed |
|
CA17173161 rs545109480 |
483 | P>H | No |
ClinGen gnomAD |
|
rs545109480 CA338083565 |
483 | P>L | No |
ClinGen gnomAD |
|
CA557055 rs375308991 |
485 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
CA557054 rs759808786 |
489 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338083507 rs759808786 |
489 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338083501 rs1453888976 |
490 | G>E | No |
ClinGen gnomAD |
|
rs1445447237 CA338083492 |
491 | P>L | No |
ClinGen gnomAD |
|
rs771002339 CA557052 |
491 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338083487 rs1261270270 |
492 | D>H | No |
ClinGen TOPMed gnomAD |
|
rs529823213 CA557050 |
493 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs768467200 CA557049 CA338083463 |
494 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338083466 rs1480680099 |
494 | E>G | No |
ClinGen TOPMed |
|
rs201587240 CA557048 |
496 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA557047 rs367573457 |
496 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs745478057 CA557045 |
498 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1224581521 CA338083432 |
498 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA338083421 rs1313102688 |
499 | P>S | No |
ClinGen gnomAD |
|
rs142665362 CA557044 |
500 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA17173126 rs141633582 |
501 | K>E | No |
ClinGen ESP gnomAD |
|
rs756730179 CA557043 |
501 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA557041 rs763725149 |
502 | P>L | No |
ClinGen ExAC gnomAD |
|
COSM1290218 rs751016124 CA557042 |
502 | P>S | Variant assessed as Somatic; 9.323e-05 impact. haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA338083399 rs751016124 |
502 | P>T | No |
ClinGen ExAC gnomAD |
|
rs758797269 CA557040 |
505 | G>A | No |
ClinGen ExAC gnomAD |
|
CA338083364 rs1276840467 |
506 | I>T | No |
ClinGen TOPMed |
|
CA557039 rs753304572 |
507 | P>S | No |
ClinGen ExAC gnomAD |
|
rs1203264041 CA338083346 |
508 | E>A | No |
ClinGen TOPMed |
|
CA557038 rs765645870 |
508 | E>K | No |
ClinGen ExAC gnomAD |
|
rs1049712592 CA17173119 |
510 | E>Q | No |
ClinGen Ensembl |
|
rs1255798790 CA338083320 |
510 | E>V | No |
ClinGen TOPMed gnomAD |
|
rs1210822034 CA338083295 |
513 | V>I | No |
ClinGen TOPMed gnomAD |
|
rs202175580 CA557037 |
516 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs761080972 CA17173110 |
520 | Y>H | No |
ClinGen Ensembl |
|
CA557035 rs766524187 |
526 | V>A | No |
ClinGen ExAC gnomAD |
|
CA557033 rs773163009 |
527 | K>R | No |
ClinGen ExAC gnomAD |
|
CA338082953 rs1195000490 COSM252437 |
536 | T>M | ovary Variant assessed as Somatic; 0.0 impact. oesophagus [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
COSM911251 CA338082901 rs1215979211 |
540 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
CA17172878 rs1041067908 |
546 | N>K | No |
ClinGen TOPMed gnomAD |
|
rs368618884 CA17172863 |
547 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed |
rs1305525986 CA338082779 |
548 | M>V | No |
ClinGen TOPMed gnomAD |
|
CA557001 rs755538474 |
550 | E>A | No |
ClinGen ExAC gnomAD |
|
rs143479789 CA557000 |
551 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs143479789 CA556999 |
551 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA338082720 rs1489955359 |
551 | P>S | No |
ClinGen TOPMed |
|
rs750573843 CA556997 |
552 | P>T | No |
ClinGen ExAC gnomAD |
|
CA17172827 rs947595346 |
553 | P>A | No |
ClinGen gnomAD |
|
rs375622476 CA556996 |
553 | P>H | No |
ClinGen ESP ExAC gnomAD |
|
rs375622476 CA556995 |
553 | P>L | No |
ClinGen ESP ExAC gnomAD |
|
rs375622476 CA338082694 |
553 | P>R | No |
ClinGen ESP ExAC gnomAD |
|
CA556994 rs751629609 |
556 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA338082651 rs1165591709 |
556 | Y>H | No |
ClinGen gnomAD |
|
TCGA novel | 557 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338082632 rs1452036228 |
557 | G>S | No |
ClinGen gnomAD |
|
CA338082622 rs1297253608 |
558 | S>P | No |
ClinGen TOPMed |
|
COSM1503520 CA556992 rs759443731 |
559 | G>E | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA338082555 rs1486670161 |
562 | D>G | No |
ClinGen gnomAD |
|
TCGA novel | 563 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs772682936 CA556988 |
563 | G>D | No |
ClinGen ExAC gnomAD |
|
rs150733401 CA556989 |
563 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs150733401 CA556990 |
563 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1368579320 CA338082499 |
566 | E>K | No |
ClinGen TOPMed |
|
rs929900104 CA17172812 |
568 | R>G | No |
ClinGen TOPMed |
|
CA556986 rs747876873 |
568 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773970113 CA556985 |
568 | R>S | No |
ClinGen ExAC gnomAD |
|
rs1355385703 COSM1627136 CA338082422 |
570 | N>D | liver [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA556984 rs768333409 |
571 | K>E | No |
ClinGen ExAC gnomAD |
|
CA338082392 rs1571158694 |
572 | D>A | No |
ClinGen Ensembl |
|
CA556982 rs780645925 |
573 | P>H | No |
ClinGen ExAC gnomAD |
|
CA556983 rs780645925 |
573 | P>R | No |
ClinGen ExAC gnomAD |
|
CA338082370 rs1376386319 |
574 | L>H | No |
ClinGen gnomAD |
|
CA338082357 rs1433346204 |
575 | Y>S | No |
ClinGen TOPMed gnomAD |
|
rs1272578108 CA338082342 |
576 | A>V | No |
ClinGen gnomAD |
|
CA338082333 rs1479697309 |
577 | K>R | No |
ClinGen TOPMed |
|
rs573765041 CA17172788 |
578 | M>T | No |
ClinGen 1000Genomes |
|
rs1170581389 CA338082309 |
579 | E>K | No |
ClinGen gnomAD |
|
CA338082292 rs1571158656 |
580 | E>G | No |
ClinGen Ensembl |
|
CA556979 rs368326401 |
581 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs757436403 CA556978 |
581 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs751825704 CA556977 COSM1503521 |
584 | R>C | lung Variant assessed as Somatic; 4.62e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA556975 rs141210110 COSM1296624 |
584 | R>H | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
rs141210110 CA556976 |
584 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs961246098 CA17172769 |
585 | Y>H | No |
ClinGen Ensembl |
|
rs1259309389 CA338082218 |
586 | G>S | No |
ClinGen gnomAD |
|
CA17172768 rs375098527 |
586 | G>V | No |
ClinGen ESP |
|
rs753649917 CA556974 |
587 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs760587600 CA556972 |
592 | M>L | No |
ClinGen ExAC gnomAD |
|
rs773137731 CA556971 |
592 | M>T | No |
ClinGen ExAC gnomAD |
|
CA338082132 rs760587600 |
592 | M>V | No |
ClinGen ExAC gnomAD |
|
CA556970 rs767460450 |
594 | I>S | No |
ClinGen ExAC gnomAD |
|
CA556969 rs200072245 |
595 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1028387499 CA17172754 |
596 | R>Q | No |
ClinGen Ensembl |
|
CA338081791 rs1171306339 |
603 | D>A | No |
ClinGen TOPMed |
|
rs1179261028 CA338081787 |
603 | D>E | No |
ClinGen TOPMed gnomAD |
|
CA338081785 rs1470750498 |
604 | K>E | No |
ClinGen gnomAD |
|
CA338081783 rs1232515950 |
604 | K>R | No |
ClinGen TOPMed gnomAD |
|
CA556942 rs747386923 |
606 | G>E | No |
ClinGen ExAC gnomAD |
|
rs1451298100 CA338081770 |
606 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs1451298100 CA338081768 |
606 | G>W | No |
ClinGen TOPMed |
|
rs748359129 CA556939 |
608 | V>A | No |
ClinGen ExAC gnomAD |
|
CA556940 rs772333361 |
608 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs1241599567 CA338081749 |
609 | H>R | No |
ClinGen gnomAD |
|
CA338081744 rs1268299403 |
610 | Y>H | No |
ClinGen TOPMed |
|
CA556935 rs781281474 |
612 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs757063544 CA556934 |
613 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338081696 rs1323487449 |
616 | D>E | No |
ClinGen TOPMed gnomAD |
|
rs1385839678 CA338081694 |
617 | L>M | No |
ClinGen TOPMed gnomAD |
|
CA338081686 rs1160125729 |
618 | P>S | No |
ClinGen gnomAD |
|
rs1332509616 CA338081677 |
619 | Y>H | No |
ClinGen gnomAD |
|
rs554923142 CA17171332 |
620 | D>N | No |
ClinGen ExAC gnomAD |
|
CA556931 rs554923142 |
620 | D>Y | No |
ClinGen ExAC gnomAD |
|
CA556929 rs141495842 |
623 | T>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA556928 rs777063752 |
626 | I>M | No |
ClinGen ExAC gnomAD |
|
rs1411629541 CA338081497 |
632 | P>L | No |
ClinGen TOPMed |
|
CA17171309 rs867938398 COSM911250 |
635 | D>N | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs748353998 CA556922 |
637 | L>V | No |
ClinGen ExAC gnomAD |
|
rs749395025 CA556919 |
638 | K>R | No |
ClinGen ExAC gnomAD |
|
CA556918 rs370143399 |
640 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1007557168 CA338081366 |
643 | G>C | No |
ClinGen gnomAD |
|
CA338081362 rs1319866472 |
643 | G>D | No |
ClinGen gnomAD |
|
CA17171297 rs1007557168 |
643 | G>S | No |
ClinGen gnomAD |
|
CA556917 rs377035401 |
644 | H>Q | No |
ClinGen ESP ExAC gnomAD |
|
rs1236244607 CA338081042 |
649 | L>V | No |
ClinGen gnomAD |
|
CA556891 rs554284427 |
652 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1333432502 CA338081009 |
654 | R>K | No |
ClinGen TOPMed |
|
CA338080997 rs1196182116 |
656 | P>S | No |
ClinGen gnomAD |
|
rs150216526 CA556890 |
658 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA556889 rs141014768 |
658 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1571157225 CA338080974 |
660 | L>V | No |
ClinGen Ensembl |
|
CA338080943 rs1175558087 |
664 | K>R | No |
ClinGen TOPMed |
|
CA17169561 rs948395858 |
666 | L>P | No |
ClinGen TOPMed gnomAD |
|
VAR_035477 | 667 | R>G | a breast cancer sample; somatic mutation [UniProt] | No | UniProt |
CA338080925 rs1379896526 COSM1343726 |
667 | R>K | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA556888 rs750901129 |
668 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556886 rs146510214 |
669 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs146510214 CA556885 |
669 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA338080890 rs1557551296 |
672 | E>Q | No |
ClinGen Ensembl |
|
rs775863580 CA556882 |
673 | K>M | No |
ClinGen ExAC gnomAD |
|
rs1399914278 CA338080871 |
674 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA556880 rs144464596 |
675 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA17169537 rs142551574 |
676 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
CA338080853 rs1163210157 |
677 | T>M | No |
ClinGen TOPMed gnomAD |
|
rs1557551264 CA338080842 |
679 | I>T | No |
ClinGen Ensembl |
|
CA17169515 rs1011683490 |
680 | V>A | No |
ClinGen TOPMed gnomAD |
|
COSM535785 rs139532134 CA556877 |
680 | V>L | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
rs759025918 CA556848 |
682 | P>H | No |
ClinGen ExAC TOPMed |
|
CA338080811 rs759025918 COSM681585 |
682 | P>L | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed |
rs999797256 CA17168614 |
683 | T>M | No |
ClinGen TOPMed gnomAD |
|
CA556845 rs759665731 |
687 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs138478240 CA556844 |
688 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1310458921 CA338080734 |
690 | P>S | No |
ClinGen gnomAD |
|
TCGA novel | 693 | I>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs760839265 CA556842 |
693 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM1343724 rs774223603 CA556841 |
694 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
TCGA novel | 698 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs201805131 CA556839 |
699 | T>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1571156484 CA338080623 |
701 | H>P | No |
ClinGen Ensembl |
|
rs146566155 CA556835 |
702 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1361883882 CA338080616 |
702 | P>S | No |
ClinGen TOPMed |
|
TCGA novel | 704 | Q>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 706 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA556833 rs556178109 |
712 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA338080547 rs556178109 |
712 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
TCGA novel | 713 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1256835141 CA338080517 |
716 | A>D | No |
ClinGen TOPMed |
|
rs199560287 COSM2157524 CA556831 |
718 | G>D | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
CA338080506 rs1420980884 |
718 | G>S | No |
ClinGen gnomAD |
|
TCGA novel | 720 | D>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1571156455 CA338080487 |
721 | T>P | No |
ClinGen Ensembl |
|
rs1571156447 CA338080428 |
729 | L>R | No |
ClinGen Ensembl |
|
CA556827 rs753965800 |
733 | V>M | No |
ClinGen ExAC gnomAD |
|
CA338080394 rs1571156436 |
735 | T>P | No |
ClinGen Ensembl |
|
CA17168510 rs766645058 |
736 | I>M | No |
ClinGen ExAC gnomAD |
|
CA17168512 rs920691061 |
736 | I>V | No |
ClinGen TOPMed |
|
CA556825 rs756337392 |
737 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
TCGA novel | 738 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs973488871 CA17168499 |
740 | Y>D | No |
ClinGen TOPMed gnomAD |
|
CA338080327 rs1557550646 |
745 | E>* | No |
ClinGen Ensembl |
|
TCGA novel | 745 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs965925767 CA17168378 |
749 | K>Q | No |
ClinGen Ensembl |
|
CA556800 rs765202272 |
749 | K>R | No |
ClinGen ExAC gnomAD |
|
rs1441655970 CA338080267 |
752 | Y>C | No |
ClinGen gnomAD |
|
TCGA novel | 756 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA556797 rs144145989 |
756 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs747682429 CA556793 |
760 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs1571156264 CA338080221 |
760 | T>P | No |
ClinGen Ensembl |
|
CA338080216 rs1395111222 |
761 | I>V | No |
ClinGen TOPMed |
|
CA338080199 rs1475400680 |
763 | N>S | No |
ClinGen gnomAD |
|
CA338080175 rs1219384828 |
766 | R>C | No |
ClinGen gnomAD |
|
CA556791 rs769174090 |
769 | E>V | No |
ClinGen ExAC gnomAD |
|
rs749824587 CA556790 |
770 | M>I | No |
ClinGen ExAC gnomAD |
|
CA556789 rs200205875 |
772 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA556788 COSM177220 rs770153232 |
772 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs777785518 CA556783 |
774 | D>E | No |
ClinGen ExAC gnomAD |
|
CA556784 rs751630064 |
774 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338080120 rs751630064 |
774 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs571442653 CA556781 |
777 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs939369028 CA17168328 |
779 | T>A | No |
ClinGen Ensembl |
|
rs1250224589 CA338080078 |
780 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs941633809 CA17168312 |
783 | D>N | No |
ClinGen Ensembl |
|
rs767255983 CA556776 |
784 | K>R | No |
ClinGen ExAC gnomAD |
|
rs761595588 CA556775 |
786 | S>C | No |
ClinGen ExAC gnomAD |
|
rs747181134 CA556774 |
788 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763457372 CA556772 |
791 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs1253890454 CA338079960 |
797 | F>L | No |
ClinGen TOPMed gnomAD |
|
rs758448519 CA17168296 |
800 | N>D | No |
ClinGen TOPMed |
|
CA556769 rs567329094 COSM179381 |
801 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
CA17168294 rs866793259 |
802 | I>S | No |
ClinGen Ensembl |
|
rs1397903786 CA338079922 |
803 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs781580398 CA556768 |
803 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA556767 rs771140431 |
804 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1171933419 CA338079914 |
805 | G>R | No |
ClinGen TOPMed |
|
TCGA novel | 805 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338079904 rs1415112967 |
806 | K>R | No |
ClinGen TOPMed gnomAD |
|
rs1404391126 CA338079894 |
807 | K>N | No |
ClinGen gnomAD |
|
rs1571156117 CA338079889 |
808 | V>E | No |
ClinGen Ensembl |
|
CA338079876 rs1424567700 |
810 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA556765 rs147522329 |
810 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs147522329 CA338079875 |
810 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 814 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA556738 rs757005064 |
814 | E>A | No |
ClinGen ExAC gnomAD |
|
rs1290392160 CA338079648 |
814 | E>D | No |
ClinGen gnomAD |
|
rs763673468 CA338079632 |
817 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763673468 CA556736 |
817 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556733 rs764789004 |
821 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338079601 rs764789004 |
821 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338079586 rs1571153133 |
824 | T>P | No |
ClinGen Ensembl |
|
CA17163884 rs943304160 |
826 | Y>C | No |
ClinGen TOPMed gnomAD |
|
CA338079539 rs1163116197 |
829 | I>V | No |
ClinGen gnomAD |
|
rs1571153100 CA338079526 |
830 | T>P | No |
ClinGen Ensembl |
|
rs2250358 CA338079506 |
831 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA17163873 rs868710116 |
832 | D>N | No |
ClinGen Ensembl |
|
CA338079474 rs1291029530 |
834 | A>T | No |
ClinGen TOPMed |
|
rs773676884 CA338079446 |
837 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773676884 CA556728 |
837 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773676884 CA338079447 |
837 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 838 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
COSM911246 rs866633572 CA17163849 |
840 | E>K | upper_aerodigestive_tract Variant assessed as Somatic; 0.0 impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
CA556725 rs774557215 |
843 | C>S | No |
ClinGen ExAC gnomAD |
|
CA338079404 rs774557215 |
843 | C>Y | No |
ClinGen ExAC gnomAD |
|
CA338079389 rs1311604640 |
846 | V>I | No |
ClinGen gnomAD |
|
CA338079351 COSM1343722 rs1372942526 |
851 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
rs1333439739 CA338079349 |
851 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
TCGA novel | 853 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1192833096 CA338079318 |
855 | N>K | No |
ClinGen TOPMed |
|
TCGA novel | 860 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338079267 rs1485596237 |
861 | R>G | No |
ClinGen gnomAD |
|
rs778558709 CA556697 |
862 | V>F | No |
ClinGen ExAC gnomAD |
|
rs1320370457 CA338079228 |
866 | Y>C | No |
ClinGen gnomAD |
|
CA338079231 rs1219650887 |
866 | Y>H | No |
ClinGen gnomAD |
|
CA338079223 rs1470017902 |
867 | K>E | No |
ClinGen TOPMed |
|
CA556693 rs756564028 |
869 | D>G | No |
ClinGen ExAC gnomAD |
|
CA17163664 rs895843981 |
871 | K>R | No |
ClinGen TOPMed |
|
TCGA novel | 884 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1445150069 CA338079097 |
886 | L>M | No |
ClinGen TOPMed gnomAD |
|
CA338079061 rs1331526606 |
891 | N>T | No |
ClinGen gnomAD |
|
CA338079035 rs1467019165 |
895 | P>S | No |
ClinGen gnomAD |
|
rs1304685989 CA338079008 |
899 | N>D | No |
ClinGen TOPMed |
|
CA338079004 rs1169458140 |
899 | N>S | No |
ClinGen gnomAD |
|
TCGA novel | 902 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 907 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1165578703 CA338078912 |
910 | D>E | No |
ClinGen TOPMed |
|
rs1474624774 CA338078899 |
912 | S>C | No |
ClinGen TOPMed |
|
TCGA novel | 924 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 925 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA556667 rs759685621 |
928 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs367567207 CA556665 |
934 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
CA556663 rs143566579 |
936 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA556661 COSM911243 rs748825072 |
942 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
TCGA novel | 943 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338078677 rs1361057477 |
944 | T>N | No |
ClinGen gnomAD |
|
TCGA novel | 953 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338078600 COSM3386265 rs1557547746 |
955 | M>I | pancreas [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA556655 rs747533927 |
956 | Q>E | No |
ClinGen ExAC |
|
rs201418790 CA338078568 |
958 | K>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556625 rs201418790 |
958 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs764957871 CA556624 |
961 | K>R | No |
ClinGen ExAC gnomAD |
|
rs1557547572 CA338078514 |
966 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
CA556623 rs370687084 |
972 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1024604852 CA17161940 |
973 | S>F | No |
ClinGen Ensembl |
|
rs770520672 CA338078451 |
975 | G>A | No |
ClinGen ExAC gnomAD |
|
rs770520672 CA556621 |
975 | G>V | No |
ClinGen ExAC gnomAD |
|
rs1474737639 CA338078438 |
977 | G>R | No |
ClinGen TOPMed gnomAD |
|
rs982624932 CA17161908 |
981 | S>L | No |
ClinGen gnomAD |
|
rs779277974 CA556616 |
986 | M>T | No |
ClinGen ExAC gnomAD |
|
CA338078284 rs951339557 CA17161836 |
987 | M>I | No |
ClinGen Ensembl |
|
CA338078268 rs1457915130 |
988 | D>E | No |
ClinGen gnomAD |
|
CA338078193 rs1571151830 |
994 | N>T | No |
ClinGen Ensembl |
|
CA338078177 rs1571151826 |
995 | H>P | No |
ClinGen Ensembl |
|
CA338078149 rs1571151816 |
997 | Y>S | No |
ClinGen Ensembl |
|
rs1571151813 CA338078118 |
999 | F>S | No |
ClinGen Ensembl |
|
CA338078091 rs1571151807 |
1001 | V>G | No |
ClinGen Ensembl |
|
rs1571151805 CA338078086 |
1002 | A>P | No |
ClinGen Ensembl |
|
rs756372764 CA556612 |
1004 | V>M | No |
ClinGen ExAC gnomAD |
|
CA556587 rs755006150 |
1005 | E>D | No |
ClinGen ExAC gnomAD |
|
rs188029046 CA556584 |
1008 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA556582 rs767012844 |
1011 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1046773276 CA17161295 |
1014 | Y>H | No |
ClinGen Ensembl |
|
rs1222325613 CA338077832 |
1015 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
TCGA novel | 1023 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA556579 rs764473779 |
1034 | K>R | No |
ClinGen ExAC gnomAD |
|
rs746052525 CA556575 |
1037 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs200489902 CA556576 |
1037 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1557547225 CA338077609 |
1038 | D>E | No |
ClinGen Ensembl |
|
rs898155631 CA17161228 |
1038 | D>Y | No |
ClinGen Ensembl |
|
rs1399801843 CA338077608 |
1039 | E>K | No |
ClinGen TOPMed gnomAD |
|
CA338077607 rs1399801843 |
1039 | E>Q | No |
ClinGen TOPMed gnomAD |
|
CA556574 rs776744869 |
1042 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338077545 rs1571151365 |
1048 | Q>P | No |
ClinGen Ensembl |
|
TCGA novel | 1067 | Y>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs752257270 CA556542 |
1073 | G>A | No |
ClinGen ExAC gnomAD |
|
CA556539 rs754139925 |
1080 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1490684735 CA338077269 |
1081 | E>K | No |
ClinGen TOPMed |
|
rs201975429 CA556538 |
1083 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1178140926 CA338077186 |
1087 | N>S | No |
ClinGen gnomAD |
|
rs1481788520 CA338077176 |
1088 | A>P | No |
ClinGen gnomAD |
|
CA556511 rs774559118 |
1090 | G>R | No |
ClinGen ExAC gnomAD |
|
rs1159184117 CA338076886 |
1101 | R>P | No |
ClinGen gnomAD |
|
rs902336928 CA17158455 |
1101 | R>W | No |
ClinGen Ensembl |
|
CA17158448 rs866230027 |
1103 | G>D | No |
ClinGen Ensembl |
|
CA338076811 rs1571149174 |
1108 | N>T | No |
ClinGen Ensembl |
|
rs1158845188 CA338076740 |
1114 | T>S | No |
ClinGen TOPMed gnomAD |
|
CA338076603 rs1261881368 |
1126 | N>I | No |
ClinGen gnomAD |
|
CA556505 rs138898133 |
1127 | D>V | No |
ClinGen ESP ExAC |
|
rs760543451 CA556470 |
1132 | S>N | No |
ClinGen ExAC gnomAD |
|
rs1390212280 CA338076355 COSM243673 |
1133 | R>H | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs767255088 CA556468 |
1134 | A>T | No |
ClinGen ExAC gnomAD |
|
CA17157502 rs866043562 |
1138 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
CA338076321 rs1179380048 |
1139 | Q>* | No |
ClinGen gnomAD |
|
CA17157470 rs939052597 |
1142 | K>E | No |
ClinGen TOPMed |
|
rs1269428222 CA338076247 |
1149 | V>M | No |
ClinGen gnomAD |
|
rs775003471 CA556463 |
1151 | R>W | No |
ClinGen ExAC gnomAD |
|
rs1351642953 CA338076220 COSM2150715 COSM42644 |
1153 | S>L | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
CA338076195 rs1237325968 |
1157 | R>C | No |
ClinGen gnomAD |
|
rs1304235291 CA338076179 |
1159 | T>M | No |
ClinGen gnomAD |
|
TCGA novel | 1164 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1363216674 CA338076147 |
1164 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1331857533 CA338076080 |
1174 | R>W | No |
ClinGen TOPMed |
|
TCGA novel | 1178 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1178 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338076036 rs1465629853 |
1181 | S>A | No |
ClinGen TOPMed |
|
rs1008462843 CA17157392 |
1181 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA556454 rs139775820 |
1182 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA17157341 rs1029272043 |
1184 | M>V | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 1187 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA556450 rs761802456 |
1191 | D>N | No |
ClinGen ExAC gnomAD |
|
rs1253698140 CA338075935 |
1196 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA338075911 rs1571148433 |
1199 | E>G | No |
ClinGen Ensembl |
|
CA556447 rs762599632 |
1203 | D>N | No |
ClinGen ExAC gnomAD |
|
rs868243347 CA17157331 |
1204 | D>N | No |
ClinGen gnomAD |
|
rs201380508 CA556444 COSM378860 |
1205 | V>M | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
TCGA novel | 1206 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1449164955 CA338075841 |
1207 | G>V | No |
ClinGen TOPMed gnomAD |
|
CA338075795 rs1329899149 |
1213 | Q>H | No |
ClinGen TOPMed |
|
CA338075782 rs1185828363 |
1215 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA338075787 rs1323282584 |
1215 | P>T | No |
ClinGen TOPMed |
|
CA556426 rs759321461 |
1216 | V>F | No |
ClinGen ExAC gnomAD |
|
rs1205880419 CA338075771 |
1217 | T>I | No |
ClinGen gnomAD |
|
TCGA novel | 1218 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA556424 rs765992512 |
1219 | I>V | No |
ClinGen ExAC gnomAD |
|
rs773619212 CA556422 |
1222 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556420 rs748432869 |
1223 | Q>E | No |
ClinGen ExAC gnomAD |
|
CA556419 rs201075301 |
1223 | Q>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA556418 rs768850601 |
1225 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1557544846 CA338075711 |
1227 | G>E | No |
ClinGen Ensembl |
|
CA338075712 rs1444367541 |
1227 | G>W | No |
ClinGen gnomAD |
|
rs749521960 CA556417 |
1228 | G>R | No |
ClinGen ExAC gnomAD |
|
rs1429123770 CA338075700 |
1229 | N>S | No |
ClinGen gnomAD |
|
CA556416 rs372589199 |
1229 | N>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs746915140 CA556414 |
1230 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs201442436 CA556413 |
1231 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556411 rs558552874 |
1232 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
COSM1343717 CA556408 rs754610815 |
1235 | K>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs753577746 COSM1728345 CA556407 |
1237 | K>Q | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs1243384412 CA338075634 |
1239 | G>D | No |
ClinGen gnomAD |
|
CA17157096 rs966745807 |
1239 | G>S | No |
ClinGen TOPMed |
|
CA338075623 rs1571148200 |
1241 | T>P | No |
ClinGen Ensembl |
|
CA338075619 rs1307528653 |
1241 | T>S | No |
ClinGen gnomAD |
|
CA556404 rs772821101 |
1242 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs1307287207 CA338075609 |
1243 | P>L | No |
ClinGen gnomAD |
|
CA338075577 rs1205077790 |
1246 | N>T | No |
ClinGen TOPMed |
|
CA17156877 VAR_048729 rs6657997 |
1253 | S>I | No |
ClinGen UniProt Ensembl dbSNP |
|
TCGA novel | 1253 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1013342220 CA17156876 |
1257 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
rs775870386 CA556372 |
1259 | D>N | No |
ClinGen ExAC gnomAD |
|
rs759818397 CA556370 |
1260 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556366 rs778975171 |
1267 | D>N | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1268 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338075410 rs1384195841 |
1269 | N>H | No |
ClinGen gnomAD |
|
CA338075349 rs1470474576 |
1273 | T>A | No |
ClinGen gnomAD |
|
rs1470474576 CA338075347 |
1273 | T>S | No |
ClinGen gnomAD |
|
rs200671755 CA338075311 |
1276 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs200671755 CA556363 |
1276 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
TCGA novel | 1280 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs780524771 CA556360 |
1281 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750093164 CA556361 |
1281 | M>V | No |
ClinGen ExAC gnomAD |
|
rs1364035397 CA338075174 |
1286 | S>T | No |
ClinGen TOPMed |
|
CA338075104 COSM243674 rs1462447310 |
1291 | A>V | prostate [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA556357 rs764554049 |
1294 | V>L | No |
ClinGen ExAC gnomAD |
|
CA338075070 rs764554049 |
1294 | V>M | No |
ClinGen ExAC gnomAD |
|
CA556356 rs763516028 |
1296 | R>G | No |
ClinGen ExAC gnomAD |
|
CA338075039 rs1340320056 |
1296 | R>L | No |
ClinGen gnomAD |
|
CA338075041 rs1340320056 |
1296 | R>P | No |
ClinGen gnomAD |
|
rs1453878947 CA338074992 |
1299 | D>E | No |
ClinGen TOPMed gnomAD |
|
rs1332580403 CA338074982 |
1300 | G>D | No |
ClinGen gnomAD |
|
CA338074989 rs1342678997 |
1300 | G>S | No |
ClinGen TOPMed gnomAD |
|
CA338074188 rs1321012112 |
1302 | E>V | No |
ClinGen TOPMed |
|
rs779444902 CA17154113 |
1304 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556319 rs779444902 |
1304 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556317 rs754219250 |
1305 | E>G | No |
ClinGen ExAC gnomAD |
|
rs1250073123 CA338074137 |
1306 | R>W | No |
ClinGen gnomAD |
|
rs951592063 CA17154093 |
1312 | E>* | No |
ClinGen TOPMed |
|
CA556315 rs756334293 |
1312 | E>D | No |
ClinGen ExAC |
|
rs761927673 CA556312 |
1315 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338073987 rs1571147007 |
1316 | D>A | No |
ClinGen Ensembl |
|
rs774334456 CA338073976 |
1316 | D>E | No |
ClinGen ExAC gnomAD |
|
CA338073968 rs1310946425 |
1317 | P>S | No |
ClinGen gnomAD |
|
CA338073949 rs1456459424 |
1318 | D>G | No |
ClinGen TOPMed |
|
CA338073875 rs1571146994 |
1323 | L>V | No |
ClinGen Ensembl |
|
rs1214575518 CA338073850 |
1325 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs978646000 CA17154069 |
1325 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
TCGA novel | 1329 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1343869532 CA338073781 |
1330 | Q>H | No |
ClinGen gnomAD |
|
CA556309 rs759449371 |
1332 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs1571146981 CA338073752 |
1334 | D>A | No |
ClinGen Ensembl |
|
COSM310081 CA556307 rs770744143 |
1334 | D>N | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA338073755 rs770744143 |
1334 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA338073739 rs1445804841 |
1336 | A>V | No |
ClinGen gnomAD |
|
CA556305 rs772831691 |
1337 | R>C | No |
ClinGen ExAC gnomAD |
|
CA338073736 rs1333610393 |
1337 | R>H | No |
ClinGen TOPMed gnomAD |
|
rs527411269 CA17154049 |
1338 | N>S | No |
ClinGen 1000Genomes gnomAD |
|
TCGA novel | 1346 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs778348411 CA556303 |
1352 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs769153589 CA556301 |
1354 | A>T | No |
ClinGen ExAC gnomAD |
|
CA556275 rs781466103 |
1362 | Q>K | No |
ClinGen ExAC gnomAD |
|
rs751734553 CA556273 |
1363 | D>E | No |
ClinGen ExAC |
|
CA556274 rs199847565 |
1363 | D>G | No |
ClinGen ExAC gnomAD |
|
CA556272 rs758386703 |
1364 | E>D | No |
ClinGen ExAC |
|
CA338073530 rs766300383 |
1365 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556269 rs766300383 |
1365 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556270 rs766300383 |
1365 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556267 rs750163696 |
1374 | I>T | No |
ClinGen ExAC |
|
rs371081328 CA556265 |
1387 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 1387 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338073355 rs1180858757 |
1389 | G>V | No |
ClinGen gnomAD |
|
rs1363527047 CA338073330 |
1391 | S>N | No |
ClinGen gnomAD |
|
CA338073326 rs1571146419 |
1391 | S>R | No |
ClinGen Ensembl |
|
rs1320291435 CA338073316 |
1393 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs1404901753 CA338073312 |
1394 | R>Q | No |
ClinGen gnomAD |
|
rs1049610312 CA338073297 |
1396 | S>C | No |
ClinGen gnomAD |
|
rs1049610312 CA17153081 |
1396 | S>F | No |
ClinGen gnomAD |
|
CA338073294 rs1390434993 |
1397 | R>Q | No |
ClinGen gnomAD |
|
CA338073295 rs1465068123 |
1397 | R>W | No |
ClinGen gnomAD |
|
CA556247 rs756976603 |
1403 | D>G | No |
ClinGen ExAC gnomAD |
|
CA17153055 rs201323551 |
1406 | K>N | No |
ClinGen TOPMed gnomAD |
|
rs1482059598 CA338072875 |
1407 | P>T | No |
ClinGen TOPMed |
|
CA338072859 rs1187993181 |
1409 | P>L | No |
ClinGen gnomAD |
|
rs1250734951 CA338072862 |
1409 | P>S | No |
ClinGen TOPMed |
|
CA338072853 rs1253919554 |
1410 | P>L | No |
ClinGen gnomAD |
|
rs1485409960 CA338072850 |
1411 | L>F | No |
ClinGen gnomAD |
|
rs1340300787 CA338072822 |
1413 | A>G | No |
ClinGen gnomAD |
|
rs1207635729 CA338072827 |
1413 | A>S | No |
ClinGen gnomAD |
|
rs1269987544 CA338072819 |
1414 | R>* | No |
ClinGen gnomAD |
|
CA556243 rs775080261 COSM229649 |
1414 | R>Q | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs1234081934 CA338072793 |
1416 | G>A | No |
ClinGen gnomAD |
|
rs764844670 CA556242 |
1416 | G>S | No |
ClinGen ExAC gnomAD |
|
CA338072790 rs1311151970 |
1417 | G>S | No |
ClinGen gnomAD |
|
CA556241 rs376892740 |
1418 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA338072623 rs993127014 |
1424 | F>L | No |
ClinGen TOPMed gnomAD |
|
rs1241539073 CA338072609 |
1425 | N>S | No |
ClinGen TOPMed |
|
CA556215 rs749319838 COSM3689790 |
1427 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA338072586 rs1156910848 |
1427 | R>Q | No |
ClinGen gnomAD |
|
rs770713905 CA556213 |
1429 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs1449170317 CA338072502 |
1435 | A>T | No |
ClinGen TOPMed |
|
CA556211 rs777670164 |
1435 | A>V | No |
ClinGen ExAC gnomAD |
|
CA17152678 rs199805203 |
1436 | I>V | No |
ClinGen 1000Genomes gnomAD |
|
rs1250253333 CA338072468 |
1437 | M>I | No |
ClinGen TOPMed gnomAD |
|
CA556210 rs758289975 |
1437 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs758289975 CA338072480 |
1437 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA17152672 rs866772665 |
1438 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
TCGA novel | 1439 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1440 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs147015402 CA556209 |
1440 | G>S | No |
ClinGen ESP ExAC gnomAD |
|
rs1294452709 CA338072432 |
1441 | M>V | No |
ClinGen TOPMed |
|
rs990972796 CA17152655 |
1443 | P>L | No |
ClinGen gnomAD |
|
CA338072400 rs1278720940 |
1443 | P>S | No |
ClinGen gnomAD |
|
CA338072383 rs1225701396 |
1444 | Q>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs1338358525 CA338072367 |
1445 | D>G | No |
ClinGen TOPMed |
|
CA556205 rs143075819 |
1446 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1571146128 CA338072328 |
1448 | N>S | No |
ClinGen Ensembl |
|
CA556204 rs761049455 |
1449 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA17152618 rs754212438 |
1450 | H>Q | No |
ClinGen gnomAD |
|
CA556203 rs750954058 |
1453 | V>G | No |
ClinGen ExAC gnomAD |
|
rs1557542934 CA338072265 |
1453 | V>L | No |
ClinGen Ensembl |
|
CA556202 rs768065431 |
1454 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338072249 COSM345080 rs1405522150 |
1454 | R>Q | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA338072253 rs768065431 |
1454 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs774760080 CA556200 |
1455 | D>G | No |
ClinGen ExAC |
|
CA338072223 rs1571146105 |
1456 | L>P | No |
ClinGen Ensembl |
|
rs1416194984 CA338072214 COSM911227 |
1457 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
CA556198 rs377385106 |
1460 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs769945939 CA556196 |
1461 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 1462 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1186993989 CA338072167 |
1463 | E>D | No |
ClinGen TOPMed gnomAD |
|
rs746871078 CA556195 |
1464 | F>L | No |
ClinGen ExAC gnomAD |
|
CA556194 rs777831280 |
1465 | R>G | No |
ClinGen ExAC gnomAD |
|
rs1417697507 CA338072029 |
1467 | Y>H | No |
ClinGen gnomAD |
|
rs567200676 CA556156 |
1471 | F>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1473263560 CA338071982 CA338071980 |
1472 | M>I | No |
ClinGen gnomAD |
|
rs907585802 CA17151973 |
1473 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA338071969 rs1176316864 |
1474 | H>Y | No |
ClinGen gnomAD |
|
CA338071934 rs1197654187 |
1478 | P>L | No |
ClinGen gnomAD |
|
CA338071922 rs1334100221 |
1480 | A>V | No |
ClinGen TOPMed gnomAD |
|
rs930319952 CA17151953 |
1482 | G>C | No |
ClinGen Ensembl |
|
TCGA novel | 1483 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1484 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338071881 rs1331377830 |
1486 | F>L | No |
ClinGen gnomAD |
|
CA338071859 rs1368486904 |
1490 | V>L | No |
ClinGen gnomAD |
|
CA338071852 rs1295664716 |
1491 | P>S | No |
ClinGen gnomAD |
|
rs774327302 CA556148 |
1492 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs761795865 CA556149 |
1492 | R>W | Variant assessed as Somatic; 4.721e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs1459263902 CA338071831 |
1495 | L>V | No |
ClinGen TOPMed gnomAD |
|
rs749109172 COSM535799 CA556146 |
1496 | S>C | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA556145 rs148542692 |
1498 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1057206674 CA17151914 |
1500 | V>M | No |
ClinGen TOPMed |
|
CA338071753 rs1191550582 |
1503 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs539999609 CA556140 |
1506 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA338071697 rs1238343036 |
1508 | S>T | No |
ClinGen gnomAD |
|
rs758887148 CA556138 |
1510 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338071676 rs1232326373 |
1511 | R>K | No |
ClinGen gnomAD |
|
rs568577877 CA17151610 |
1521 | N>S | No |
ClinGen gnomAD |
|
CA338071453 rs1425470885 |
1526 | T>N | No |
ClinGen gnomAD |
|
CA556123 rs200938629 |
1526 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA556122 rs746518710 |
1527 | P>L | No |
ClinGen ExAC gnomAD |
|
CA338071445 rs1338369337 |
1527 | P>S | No |
ClinGen TOPMed gnomAD |
|
CA556120 rs772563408 |
1531 | P>S | No |
ClinGen ExAC gnomAD |
|
CA338071397 rs1330251647 |
1532 | E>K | No |
ClinGen gnomAD |
|
rs1337915803 CA338071377 |
1533 | G>V | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 1534 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs755369914 CA556117 |
1534 | P>S | No |
ClinGen ExAC gnomAD |
|
CA338071360 rs1290913801 CA338071358 |
1535 | E>D | No |
ClinGen TOPMed gnomAD |
|
CA556115 rs780415966 |
1535 | E>K | No |
ClinGen ExAC gnomAD |
|
CA338071352 rs1413573305 |
1536 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs750463410 CA338071316 |
1539 | S>* | No |
ClinGen ExAC gnomAD |
|
CA556113 rs750463410 |
1539 | S>L | No |
ClinGen ExAC gnomAD |
|
CA556114 rs2843493 VAR_048730 |
1539 | S>P | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA338071321 rs2843493 |
1539 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA556111 rs150095781 |
1540 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA338071303 rs1416327618 |
1541 | E>K | No |
ClinGen TOPMed gnomAD |
|
CA338071290 rs147998739 |
1542 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556108 rs147998739 |
1542 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556109 rs765209407 |
1542 | V>M | No |
ClinGen ExAC gnomAD |
|
rs776477384 CA556107 |
1543 | I>T | No |
ClinGen ExAC gnomAD |
|
rs201559496 CA556106 |
1545 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
rs1436290428 CA338071271 |
1546 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA17151457 rs199810631 |
1550 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
rs1210756253 CA338071228 |
1552 | P>L | No |
ClinGen gnomAD |
|
COSM175530 CA338071226 rs1160075084 |
1553 | A>T | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
CA556103 rs570770301 |
1553 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA338071184 rs1384011416 |
1556 | A>S | No |
ClinGen TOPMed |
|
rs1329297742 CA338071178 |
1556 | A>V | No |
ClinGen gnomAD |
|
CA556101 rs779528061 |
1557 | H>P | No |
ClinGen ExAC gnomAD |
|
rs779528061 CA338071171 |
1557 | H>R | No |
ClinGen ExAC gnomAD |
|
rs749653354 CA556099 |
1558 | L>I | No |
ClinGen ExAC gnomAD |
|
rs749653354 CA556100 |
1558 | L>V | No |
ClinGen ExAC gnomAD |
|
rs1323983162 CA338071146 |
1559 | L>P | No |
ClinGen gnomAD |
|
CA338071137 rs1447358853 |
1560 | P>S | No |
ClinGen TOPMed |
|
CA556095 rs781286534 |
1562 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs200173777 CA556096 |
1562 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA338071078 rs1160310339 |
1566 | P>S | No |
ClinGen gnomAD |
|
rs1244287146 CA338070184 |
1567 | D>E | No |
ClinGen TOPMed gnomAD |
|
CA17148817 rs932601154 |
1568 | K>T | No |
ClinGen TOPMed gnomAD |
|
CA556076 rs757567388 |
1571 | A>T | No |
ClinGen ExAC gnomAD |
|
rs374832412 CA17148799 |
1571 | A>V | No |
ClinGen Ensembl |
|
rs747078427 CA556075 |
1572 | Q>H | No |
ClinGen ExAC TOPMed |
|
rs1278696521 CA338070031 |
1575 | Y>C | No |
ClinGen TOPMed gnomAD |
|
CA556072 rs138962606 |
1576 | M>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA556073 rs754869172 |
1576 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs955901532 CA17148779 |
1577 | D>G | No |
ClinGen Ensembl |
|
COSM1686925 rs1228803022 CA338069977 |
1578 | E>K | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs766351253 CA556071 |
1579 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338069913 rs1571144280 |
1580 | D>A | No |
ClinGen Ensembl |
|
CA338069910 rs866978202 COSM1474120 |
1580 | D>E | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs1557541194 CA338069923 |
1580 | D>N | No |
ClinGen Ensembl |
|
rs945772099 CA17148765 |
1581 | P>R | No |
ClinGen TOPMed |
|
CA556068 rs527819079 |
1582 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs185960707 CA556067 |
1583 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1436823071 CA338069855 |
1583 | A>V | No |
ClinGen gnomAD |
|
CA556066 rs773935601 |
1584 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA338069819 rs1173430823 |
1585 | K>R | No |
ClinGen gnomAD |
|
CA338069759 rs1410918223 |
1588 | Q>K | No |
ClinGen gnomAD |
|
rs1469595109 CA338069688 |
1592 | V>F | No |
ClinGen TOPMed |
|
CA338069248 rs1420495273 |
1596 | P>L | No |
ClinGen TOPMed gnomAD |
|
rs1018048435 CA17148400 |
1597 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA556035 rs761874883 |
1598 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs761874883 CA556034 |
1598 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1156906773 CA338069227 |
1600 | D>G | No |
ClinGen gnomAD |
|
CA338069223 rs1416618450 |
1601 | R>G | No |
ClinGen gnomAD |
|
CA556033 rs780805084 |
1602 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338069211 rs1420518236 |
1603 | E>K | No |
ClinGen gnomAD |
|
rs1176439995 CA338069201 |
1604 | S>R | No |
ClinGen TOPMed gnomAD |
|
rs1006816516 CA17148388 |
1605 | E>K | No |
ClinGen Ensembl |
|
rs888174519 CA338069174 |
1607 | K>N | No |
ClinGen TOPMed |
|
CA338069160 rs1477004432 |
1609 | E>G | No |
ClinGen gnomAD |
|
CA556029 rs139264279 |
1609 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA338069156 rs1467924521 |
1610 | S>G | No |
ClinGen gnomAD |
|
CA556028 rs752090790 |
1610 | S>R | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1615 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1318984020 CA338069109 |
1615 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs759911109 CA556026 |
1616 | R>S | No |
ClinGen ExAC gnomAD |
|
CA338069076 rs1223406120 |
1618 | R>G | No |
ClinGen gnomAD |
|
rs754347862 CA556025 |
1618 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA17148338 rs754347862 |
1618 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338069068 rs1306083617 |
1619 | E>Q | No |
ClinGen gnomAD |
|
CA17148309 rs761021667 |
1620 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556024 rs766833642 |
1620 | E>K | No |
ClinGen ExAC gnomAD |
|
CA556023 rs761021667 |
1620 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV000903484 rs147417867 CA556020 |
1621 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs772221709 CA556021 |
1621 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1454444445 CA338069029 |
1623 | E>Q | No |
ClinGen gnomAD |
|
rs774252696 CA556019 |
1625 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338068997 rs774252696 |
1625 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs370163365 CA556016 |
1629 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA556017 rs749380220 |
1629 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338068938 rs1571144002 |
1631 | S>P | No |
ClinGen Ensembl |
|
rs201640978 COSM2156475 CA556013 |
1632 | P>L | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
rs1259030492 CA338068926 |
1632 | P>S | No |
ClinGen gnomAD |
|
rs747866802 CA556011 |
1633 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA556010 rs148282370 |
1634 | Q>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1370951963 CA338068884 |
1636 | P>A | No |
ClinGen gnomAD |
|
CA556009 COSM304287 rs754478607 |
1636 | P>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA555975 rs747961240 |
1638 | E>G | No |
ClinGen ExAC gnomAD |
|
rs1290416093 CA338067483 |
1639 | E>K | No |
ClinGen TOPMed |
|
rs774026286 CA555974 |
1640 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555973 rs748920909 |
1643 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs779486662 CA555970 |
1646 | K>R | No |
ClinGen ExAC gnomAD |
|
rs1274231161 CA338067398 |
1647 | I>T | No |
ClinGen gnomAD |
|
rs376036147 CA555969 |
1648 | L>P | No |
ClinGen ESP ExAC gnomAD |
|
rs781663550 CA555967 |
1649 | D>E | No |
ClinGen ExAC gnomAD |
|
CA555968 rs745426545 |
1649 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338067347 rs1366086680 |
1652 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
TCGA novel | 1652 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338067308 rs1323118176 |
1655 | L>F | No |
ClinGen TOPMed |
|
rs1174697815 CA338067291 |
1656 | I>T | No |
ClinGen gnomAD |
|
rs937389187 CA17140988 |
1658 | S>T | No |
ClinGen TOPMed |
|
CA555964 rs778006752 |
1660 | G>W | No |
ClinGen ExAC gnomAD |
|
CA555963 rs758606696 |
1662 | S>G | No |
ClinGen ExAC gnomAD |
|
CA338067128 COSM1200984 rs1476026134 |
1664 | E>K | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
rs1476026134 CA338067124 |
1664 | E>Q | No |
ClinGen TOPMed gnomAD |
|
rs755263508 CA555942 COSM3977792 |
1668 | D>G | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs753900117 CA555941 |
1669 | D>A | No |
ClinGen ExAC TOPMed |
|
CA555940 rs766396804 |
1670 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555938 rs764136045 |
1672 | A>P | No |
ClinGen ExAC gnomAD |
|
rs764136045 CA555937 |
1672 | A>T | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1673 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA17140328 rs910444082 |
1675 | K>M | No |
ClinGen Ensembl |
|
CA338066930 rs1166392675 |
1675 | K>Q | No |
ClinGen TOPMed gnomAD |
|
rs1408178847 CA338066895 |
1677 | P>R | No |
ClinGen TOPMed |
|
CA338066882 rs1371118721 |
1678 | I>M | No |
ClinGen TOPMed gnomAD |
|
rs188510777 CA555932 |
1678 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA555931 rs770372437 |
1680 | T>I | No |
ClinGen ExAC gnomAD |
|
CA338066862 rs1471069702 |
1680 | T>P | No |
ClinGen gnomAD |
|
CA338066853 rs1295044750 |
1681 | Q>* | No |
ClinGen gnomAD |
|
rs755282092 CA555930 |
1684 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs751350223 CA555929 |
1685 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1273907487 CA338066794 |
1686 | K>E | No |
ClinGen TOPMed gnomAD |
|
rs780006802 CA555927 |
1686 | K>I | No |
ClinGen ExAC gnomAD |
|
CA338066754 rs1348931135 |
1689 | D>N | No |
ClinGen TOPMed gnomAD |
|
CA338066747 rs1162329591 |
1689 | D>V | No |
ClinGen gnomAD |
|
CA555924 rs749539777 |
1692 | G>A | No |
ClinGen ExAC gnomAD |
|
CA17140265 rs749539777 |
1692 | G>E | No |
ClinGen ExAC gnomAD |
|
CA338066708 rs185660854 |
1692 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA555925 rs185660854 |
1692 | G>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
COSM3805676 rs756114243 CA555922 |
1693 | K>E | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
TCGA novel | 1693 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA555921 rs200902435 |
1694 | K>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1277299153 CA338066681 |
1694 | K>R | No |
ClinGen TOPMed |
|
CA555917 rs752425317 |
1697 | K>E | No |
ClinGen ExAC gnomAD |
|
rs1402081839 CA338066637 |
1697 | K>R | No |
ClinGen gnomAD |
|
rs759140917 CA555915 |
1698 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs759140917 CA338066630 |
1698 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555914 rs776126972 |
1699 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1227521432 CA338066616 |
1699 | G>R | No |
ClinGen TOPMed |
|
rs1444720831 CA338066551 |
1702 | K>M | No |
ClinGen TOPMed |
|
CA17140237 rs202017595 |
1702 | K>Q | No |
ClinGen gnomAD |
|
CA338066497 rs1557536877 |
1704 | M>T | No |
ClinGen Ensembl |
|
rs1264933429 CA338066476 |
1706 | N>H | No |
ClinGen gnomAD |
|
COSM911226 CA338066456 rs1318894130 |
1708 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
CA555910 rs145127316 |
1708 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
rs769117837 CA555907 |
1710 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA338066427 rs1385585427 |
1710 | G>V | No |
ClinGen gnomAD |
|
CA338066422 rs1288873176 |
1711 | G>S | No |
ClinGen gnomAD |
|
CA17140204 rs375129927 |
1713 | T>M | No |
ClinGen ESP |
|
TCGA novel | 1714 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338066306 rs1373529184 |
1716 | H>Q | No |
ClinGen gnomAD |
|
CA338066300 rs1172404265 |
1717 | T>M | No |
ClinGen gnomAD |
|
rs754955470 CA555880 |
1722 | E>K | No |
ClinGen ExAC gnomAD |
|
CA555879 rs753507616 |
1723 | E>G | No |
ClinGen ExAC gnomAD |
|
CA17139922 rs1028098568 |
1724 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA555877 rs573796175 |
1724 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1301069267 CA338066195 |
1725 | A>G | No |
ClinGen gnomAD |
|
CA338066179 rs750062959 |
1727 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555876 CA338066176 rs750062959 |
1727 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338066163 rs1441818113 |
1728 | S>F | No |
ClinGen Ensembl |
|
rs1315600199 CA338066167 |
1728 | S>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA555874 rs761399990 |
1730 | G>A | No |
ClinGen ExAC gnomAD |
|
CA555873 rs142975797 |
1731 | K>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA17139898 rs201248560 |
1732 | I>T | No |
ClinGen TOPMed gnomAD |
|
rs1406342900 CA338066091 |
1734 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA17139889 rs775681121 |
1735 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555870 rs775681121 |
1735 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763524984 CA555871 |
1735 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555869 rs770217575 |
1736 | W>R | No |
ClinGen ExAC |
|
CA555868 rs759868081 |
1737 | H>L | No |
ClinGen ExAC gnomAD |
|
CA338066053 rs1360828017 |
1738 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1463998531 CA338066054 |
1738 | R>W | No |
ClinGen gnomAD |
|
rs776805670 CA555867 |
1739 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs771211793 CA555866 |
1739 | R>H | No |
ClinGen ExAC gnomAD |
|
rs776805670 CA338066050 |
1739 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA17139857 rs1017414532 |
1742 | Y>S | No |
ClinGen TOPMed gnomAD |
|
CA338066001 rs747031590 |
1746 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555865 rs747031590 |
1746 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749269983 CA555862 |
1749 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA555839 rs746685685 |
1753 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1297262403 CA338065739 |
1755 | R>H | No |
ClinGen gnomAD |
|
rs777340365 CA555838 |
1756 | W>* | No |
ClinGen ExAC gnomAD |
|
CA555837 rs757896112 |
1756 | W>C | No |
ClinGen ExAC gnomAD |
|
CA17136376 rs267598680 |
1760 | Q>* | No |
ClinGen Ensembl |
|
TCGA novel | 1760 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA17136369 rs879222785 |
1762 | D>H | No |
ClinGen Ensembl |
|
CA17136365 rs765762799 |
1764 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555835 rs765762799 |
1764 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs752217521 CA555836 |
1764 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA338065676 rs1571137803 |
1765 | Y>D | No |
ClinGen Ensembl |
|
CA338065667 rs755479085 |
1766 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555834 rs755479085 |
1766 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 1768 | L>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA555833 rs754161216 |
1769 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1381174395 CA338065643 |
1769 | N>S | No |
ClinGen TOPMed |
|
CA555831 rs761076818 |
1770 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773387477 CA555830 |
1771 | P>L | No |
ClinGen ExAC gnomAD |
|
rs1399808132 CA338065600 |
1775 | E>D | No |
ClinGen TOPMed |
|
CA338065590 rs1350673323 |
1777 | H>Y | No |
ClinGen Ensembl |
|
CA338065571 rs1487874350 |
1779 | G>V | No |
ClinGen gnomAD |
|
CA338065561 rs1360575891 |
1781 | Y>H | No |
ClinGen TOPMed |
|
TCGA novel | 1783 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1571137759 CA338065520 |
1786 | N>S | No |
ClinGen Ensembl |
|
rs1466962190 CA338065512 |
1787 | K>R | No |
ClinGen gnomAD |
|
CA338065485 rs1232676436 |
1791 | R>H | No |
ClinGen gnomAD |
|
rs750731381 CA555794 |
1798 | Q>P | No |
ClinGen ExAC gnomAD |
|
CA338065333 rs1166555488 |
1799 | A>S | No |
ClinGen gnomAD |
|
rs574274586 CA555791 |
1800 | L>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA555788 rs752883486 |
1807 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA555789 rs762238932 |
1807 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338065143 rs1247364207 |
1809 | A>S | No |
ClinGen gnomAD |
|
rs376526371 CA555786 |
1810 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1370468031 CA338065063 |
1813 | N>I | No |
ClinGen gnomAD |
|
CA555783 rs761707043 |
1814 | M>V | No |
ClinGen ExAC gnomAD |
|
rs573215215 CA555782 |
1815 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
rs1571137253 CA338064972 |
1817 | D>A | No |
ClinGen Ensembl |
|
TCGA novel | 1819 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1819 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA555776 rs373083783 |
1822 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA338064800 rs1392018286 |
1825 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA338064786 rs1295813824 |
1826 | N>D | No |
ClinGen TOPMed |
|
CA338064778 rs1298395512 |
1826 | N>I | No |
ClinGen gnomAD |
|
rs778128816 CA338064753 |
1827 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs778128816 CA555773 |
1827 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338064744 rs1158047658 |
1827 | A>V | No |
ClinGen gnomAD |
|
CA555771 rs775830653 |
1828 | R>C | No |
ClinGen ExAC gnomAD |
|
CA555770 rs765427175 |
1828 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA338064701 rs1557535609 |
1830 | A>S | No |
ClinGen Ensembl |
|
CA338064530 rs1451692059 |
1841 | H>Q | No |
ClinGen TOPMed |
|
CA338064498 rs1489513792 |
1845 | E>K | No |
ClinGen gnomAD |
|
rs761495028 CA555766 |
1847 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
TCGA novel | 1850 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs774141281 CA555765 |
1854 | N>Y | No |
ClinGen ExAC gnomAD |
|
rs762621807 CA338064374 |
1856 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555763 rs762621807 |
1856 | V>I | Variant assessed as Somatic; 4.627e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1278512323 CA338064359 |
1858 | H>Q | No |
ClinGen gnomAD |
|
rs1377503976 CA338063908 |
1863 | Q>* | No |
ClinGen gnomAD |
|
rs1027830535 CA17133686 |
1864 | L>M | No |
ClinGen Ensembl |
|
CA17133683 rs944088931 |
1866 | E>Q | No |
ClinGen TOPMed gnomAD |
|
rs1370579254 CA338063802 |
1869 | S>N | No |
ClinGen gnomAD |
|
rs1444357332 CA338063786 |
1870 | D>N | No |
ClinGen gnomAD |
|
rs1239367714 CA338063748 |
1871 | M>T | No |
ClinGen gnomAD |
|
rs759234296 CA555723 |
1874 | D>N | No |
ClinGen ExAC gnomAD |
|
rs765938870 CA555721 COSM1200983 |
1875 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA555720 rs760299084 |
1876 | T>I | No |
ClinGen ExAC gnomAD |
|
rs947205115 CA17133632 |
1877 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA338063586 rs1354124889 COSM319434 |
1881 | M>V | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs773847893 CA555719 |
1884 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs867977204 CA17133608 |
1884 | R>H | No |
ClinGen gnomAD |
|
rs991361795 CA17133605 |
1886 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs928253921 | 1887 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1571134343 CA338063527 |
1888 | V>M | No |
ClinGen Ensembl |
|
CA555713 rs374719409 |
1890 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA555714 rs374719409 |
1890 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA555712 rs769836156 |
1890 | A>V | No |
ClinGen ExAC gnomAD |
|
CA555711 rs371741094 |
1891 | R>W | No |
ClinGen ESP ExAC gnomAD |
|
rs1198902244 CA338063470 |
1897 | R>C | No |
ClinGen TOPMed gnomAD |
|
rs752426937 CA555708 |
1897 | R>H | No |
ClinGen ExAC gnomAD |
|
CA555707 rs778802930 |
1898 | S>R | No |
ClinGen ExAC gnomAD |
|
rs766011316 CA555705 |
1902 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs760245748 CA555703 |
1902 | R>H | No |
ClinGen ExAC gnomAD |
|
CA555704 rs766011316 |
1902 | R>S | No |
ClinGen ExAC gnomAD |
|
COSM1470350 CA338063416 rs1349809904 |
1906 | R>C | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
rs1296476872 CA338063415 |
1906 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA17133441 rs1054235000 |
1907 | A>S | No |
ClinGen TOPMed |
|
CA338063412 rs1054235000 |
1907 | A>T | No |
ClinGen TOPMed |
|
rs1332890670 CA338063405 |
1908 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs762439778 CA555700 |
1909 | D>N | No |
ClinGen ExAC gnomAD |
|
rs1399498229 CA338063383 |
1911 | T>I | No |
ClinGen gnomAD |
|
TCGA novel | 1914 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs769041071 CA555697 |
1914 | Q>L | No |
ClinGen ExAC gnomAD |
|
rs1430570449 CA338063305 |
1915 | G>C | No |
ClinGen TOPMed |
|
TCGA novel | 1915 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs759789009 CA555675 |
1916 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1336616863 CA338063290 |
1916 | A>V | No |
ClinGen gnomAD |
|
CA555673 rs142351712 |
1917 | F>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs776646330 CA555674 |
1917 | F>L | No |
ClinGen ExAC gnomAD |
|
CA555671 rs145030669 |
1918 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA17133250 rs145030669 |
1918 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 1919 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338063257 rs1284687290 |
1920 | S>P | No |
ClinGen TOPMed |
|
CA338063254 rs1226449269 |
1920 | S>Y | No |
ClinGen TOPMed |
|
rs1414282727 CA338063242 |
1921 | Q>R | No |
ClinGen gnomAD |
|
CA338063226 rs1442511434 |
1922 | M>I | No |
ClinGen gnomAD |
|
CA338063228 rs1164737709 |
1922 | M>T | No |
ClinGen TOPMed gnomAD |
|
rs749040881 CA17133241 |
1925 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs768487764 CA555670 |
1925 | N>T | No |
ClinGen ExAC gnomAD |
|
CA555668 rs780025382 |
1926 | N>Y | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1927 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA338063172 rs1571134104 |
1927 | F>L | No |
ClinGen Ensembl |
|
rs1240034197 CA338063169 |
1927 | F>S | No |
ClinGen gnomAD |
|
CA338063162 rs1392975056 |
1928 | G>E | No |
ClinGen TOPMed |
|
CA338063154 rs1571134089 |
1929 | P>L | No |
ClinGen Ensembl |
|
rs139445002 CA555667 |
1930 | N>K | No |
ClinGen ESP ExAC TOPMed |
|
CA555666 rs745492594 |
1931 | F>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1469509787 CA338063140 |
1931 | F>L | No |
ClinGen TOPMed |
|
CA338063139 rs1437416058 |
1932 | R>G | No |
ClinGen gnomAD |
|
CA338063136 rs1291078347 |
1932 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA338063138 rs1437416058 |
1932 | R>W | No |
ClinGen gnomAD |
|
TCGA novel | 1933 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1357718660 CA338063129 |
1933 | G>V | No |
ClinGen gnomAD |
|
rs756789409 CA555664 |
1934 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs764604388 CA555662 |
1936 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 1937 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1350148741 CA338063099 |
1939 | I>V | No |
ClinGen TOPMed gnomAD |
|
rs1557533262 CA338063091 |
1940 | V>F | No |
ClinGen Ensembl |
|
rs201561264 CA17133179 |
1942 | Y>* | No |
ClinGen 1000Genomes gnomAD |
|
rs753070352 CA555660 |
1944 | Q>* | No |
ClinGen ExAC TOPMed |
|
rs1159186065 CA338063062 |
1944 | Q>R | No |
ClinGen TOPMed gnomAD |
|
rs1571134032 CA338063049 |
1945 | M>I | No |
ClinGen Ensembl |
|
rs547857724 CA555659 |
1945 | M>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs759946382 CA555658 |
1946 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555657 rs538801025 |
1948 | G>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA555656 rs538801025 |
1948 | G>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA338062999 rs1469666593 |
1950 | Y>C | No |
ClinGen gnomAD |
|
rs1211684632 COSM4144111 CA338062911 |
1953 | D>G | thyroid Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
CA555654 rs773165192 |
1953 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA555617 rs767845383 |
1954 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs560129253 CA555618 |
1954 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1444606812 CA338062902 |
1954 | I>V | No |
ClinGen gnomAD |
|
rs1201275951 CA338062891 |
1955 | I>Q | No |
ClinGen gnomAD |
|
rs761969552 CA555615 |
1955 | I>W | No |
ClinGen ExAC gnomAD |
2 associated diseases with Q8TDI0
[MIM: 619873]: Parenti-Mignot neurodevelopmental syndrome (PMNDS)
An autosomal dominant neurodevelopmental disorder characterized by intellectual disability, speech delay, motor delay, behavioral problems, and epilepsy. {ECO:0000269|PubMed:33944996}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- An autosomal dominant neurodevelopmental disorder characterized by intellectual disability, speech delay, motor delay, behavioral problems, and epilepsy. {ECO:0000269|PubMed:33944996}. Note=The disease is caused by variants affecting the gene represented in this entry.
17 regional properties for Q8TDI0
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | SNF2, N-terminal | 719 - 998 | IPR000330 |
domain | Chromo/chromo shadow domain | 466 - 554 | IPR000953-1 |
domain | Chromo/chromo shadow domain | 590 - 646 | IPR000953-2 |
domain | Helicase, C-terminal | 1026 - 1193 | IPR001650 |
domain | Zinc finger, PHD-type | 345 - 388 | IPR001965-1 |
domain | Zinc finger, PHD-type | 418 - 461 | IPR001965-2 |
conserved_site | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | 842 - 851 | IPR002464 |
domain | CHD subfamily II, SANT-like domain | 1372 - 1531 | IPR009462 |
domain | Domain of unknown function DUF1087 | 1295 - 1359 | IPR009463 |
domain | CHD, C-terminal 2 | 1733 - 1878 | IPR012957 |
domain | CHD, N-terminal | 150 - 200 | IPR012958 |
domain | Helicase superfamily 1/2, ATP-binding domain | 696 - 908 | IPR014001 |
conserved_site | Zinc finger, PHD-type, conserved site | 346 - 387 | IPR019786 |
domain | Zinc finger, PHD-finger | 343 - 390 | IPR019787-1 |
domain | Zinc finger, PHD-finger | 416 - 463 | IPR019787-2 |
domain | Chromo domain | 593 - 631 | IPR023780 |
domain | Chromodomain-helicase-DNA-binding protein 5, DEAH-box helicase domain | 700 - 931 | IPR028727 |
Functions
Description | ||
---|---|---|
EC Number | 3.6.4.12 | Acting on ATP; involved in cellular and subcellular movement |
Subcellular Localization |
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PANTHER Family | ||
PANTHER Subfamily | ||
PANTHER Protein Class | ||
PANTHER Pathway Category | No pathway information available |
8 GO annotations of cellular component
Name | Definition |
---|---|
chromatin | The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome. |
cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
heterochromatin | A compact and highly condensed form of chromatin that is refractory to transcription. |
membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
nuclear speck | A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy. |
nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
NuRD complex | An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins. |
9 GO annotations of molecular function
Name | Definition |
---|---|
ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
ATP-dependent chromatin remodeler activity | An activity, driven by ATP hydrolysis, that modulates the contacts between histones and DNA, resulting in a change in chromosome architecture within the nucleosomal array, leading to chromatin remodeling. |
chromatin binding | Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
DNA helicase activity | Unwinding of a DNA helix, driven by ATP hydrolysis. |
H3K27me3 modified histone binding | Binding to a histone H3 in which the lysine residue at position 27 has been modified by trimethylation. |
histone binding | Binding to a histone, any of a group of water-soluble proteins found in association with the DNA of eukaryotic or archaeal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in gene regulation and DNA replication. They may be chemically modified (methylated, acetlyated and others) to regulate gene transcription. |
metal ion binding | Binding to a metal ion. |
8 GO annotations of biological process
Name | Definition |
---|---|
cerebral cortex neuron differentiation | The process in which a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex. |
chromatin remodeling | A dynamic process of chromatin reorganization resulting in changes to chromatin structure. These changes allow DNA metabolic processes such as transcriptional regulation, DNA recombination, DNA repair, and DNA replication. |
histone H3-K27 trimethylation | The modification of histone H3 by addition of three methyl groups to lysine at position 27 of the histone. |
histone H4 acetylation | The modification of histone H4 by the addition of an acetyl group. |
negative regulation of cell population proliferation | Any process that stops, prevents or reduces the rate or extent of cell proliferation. |
negative regulation of transcription by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. |
positive regulation of signal transduction by p53 class mediator | Any process that activates or increases the frequency, rate or extent of signal transduction by p53 class mediator. |
regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
8 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
O16102 | Chd3 | Chromodomain-helicase-DNA-binding protein 3 | Drosophila melanogaster (Fruit fly) | PR |
O14646 | CHD1 | Chromodomain-helicase-DNA-binding protein 1 | Homo sapiens (Human) | PR |
Q12873 | CHD3 | Chromodomain-helicase-DNA-binding protein 3 | Homo sapiens (Human) | PR |
Q14839 | CHD4 | Chromodomain-helicase-DNA-binding protein 4 | Homo sapiens (Human) | PR |
A2A8L1 | Chd5 | Chromodomain-helicase-DNA-binding protein 5 | Mus musculus (Mouse) | PR |
Q6PDQ2 | Chd4 | Chromodomain-helicase-DNA-binding protein 4 | Mus musculus (Mouse) | PR |
D3ZD32 | Chd5 | Chromodomain-helicase-DNA-binding protein 5 | Rattus norvegicus (Rat) | PR |
Q22516 | chd-3 | Chromodomain-helicase-DNA-binding protein 3 homolog | Caenorhabditis elegans | PR |
10 | 20 | 30 | 40 | 50 | 60 |
MRGPVGTEEE | LPRLFAEEME | NEDEMSEEED | GGLEAFDDFF | PVEPVSLPKK | KKPKKLKENK |
70 | 80 | 90 | 100 | 110 | 120 |
CKGKRKKKEG | SNDELSENEE | DLEEKSESEG | SDYSPNKKKK | KKLKDKKEKK | AKRKKKDEDE |
130 | 140 | 150 | 160 | 170 | 180 |
DDNDDGCLKE | PKSSGQLMAE | WGLDDVDYLF | SEEDYHTLTN | YKAFSQFLRP | LIAKKNPKIP |
190 | 200 | 210 | 220 | 230 | 240 |
MSKMMTVLGA | KWREFSANNP | FKGSSAAAAA | AAVAAAVETV | TISPPLAVSP | PQVPQPVPIR |
250 | 260 | 270 | 280 | 290 | 300 |
KAKTKEGKGP | GVRKKIKGSK | DGKKKGKGKK | TAGLKFRFGG | ISNKRKKGSS | SEEDEREESD |
310 | 320 | 330 | 340 | 350 | 360 |
FDSASIHSAS | VRSECSAALG | KKSKRRRKKK | RIDDGDGYET | DHQDYCEVCQ | QGGEIILCDT |
370 | 380 | 390 | 400 | 410 | 420 |
CPRAYHLVCL | DPELEKAPEG | KWSCPHCEKE | GIQWEPKDDD | DEEEEGGCEE | EEDDHMEFCR |
430 | 440 | 450 | 460 | 470 | 480 |
VCKDGGELLC | CDACPSSYHL | HCLNPPLPEI | PNGEWLCPRC | TCPPLKGKVQ | RILHWRWTEP |
490 | 500 | 510 | 520 | 530 | 540 |
PAPFMVGLPG | PDVEPSLPPP | KPLEGIPERE | FFVKWAGLSY | WHCSWVKELQ | LELYHTVMYR |
550 | 560 | 570 | 580 | 590 | 600 |
NYQRKNDMDE | PPPFDYGSGD | EDGKSEKRKN | KDPLYAKMEE | RFYRYGIKPE | WMMIHRILNH |
610 | 620 | 630 | 640 | 650 | 660 |
SFDKKGDVHY | LIKWKDLPYD | QCTWEIDDID | IPYYDNLKQA | YWGHRELMLG | EDTRLPKRLL |
670 | 680 | 690 | 700 | 710 | 720 |
KKGKKLRDDK | QEKPPDTPIV | DPTVKFDKQP | WYIDSTGGTL | HPYQLEGLNW | LRFSWAQGTD |
730 | 740 | 750 | 760 | 770 | 780 |
TILADEMGLG | KTVQTIVFLY | SLYKEGHSKG | PYLVSAPLST | IINWEREFEM | WAPDFYVVTY |
790 | 800 | 810 | 820 | 830 | 840 |
TGDKESRSVI | RENEFSFEDN | AIRSGKKVFR | MKKEVQIKFH | VLLTSYELIT | IDQAILGSIE |
850 | 860 | 870 | 880 | 890 | 900 |
WACLVVDEAH | RLKNNQSKFF | RVLNSYKIDY | KLLLTGTPLQ | NNLEELFHLL | NFLTPERFNN |
910 | 920 | 930 | 940 | 950 | 960 |
LEGFLEEFAD | ISKEDQIKKL | HDLLGPHMLR | RLKADVFKNM | PAKTELIVRV | ELSQMQKKYY |
970 | 980 | 990 | 1000 | 1010 | 1020 |
KFILTRNFEA | LNSKGGGNQV | SLLNIMMDLK | KCCNHPYLFP | VAAVEAPVLP | NGSYDGSSLV |
1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
KSSGKLMLLQ | KMLKKLRDEG | HRVLIFSQMT | KMLDLLEDFL | EYEGYKYERI | DGGITGGLRQ |
1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
EAIDRFNAPG | AQQFCFLLST | RAGGLGINLA | TADTVIIYDS | DWNPHNDIQA | FSRAHRIGQN |
1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
KKVMIYRFVT | RASVEERITQ | VAKRKMMLTH | LVVRPGLGSK | SGSMTKQELD | DILKFGTEEL |
1210 | 1220 | 1230 | 1240 | 1250 | 1260 |
FKDDVEGMMS | QGQRPVTPIP | DVQSSKGGNL | AASAKKKHGS | TPPGDNKDVE | DSSVIHYDDA |
1270 | 1280 | 1290 | 1300 | 1310 | 1320 |
AISKLLDRNQ | DATDDTELQN | MNEYLSSFKV | AQYVVREEDG | VEEVEREIIK | QEENVDPDYW |
1330 | 1340 | 1350 | 1360 | 1370 | 1380 |
EKLLRHHYEQ | QQEDLARNLG | KGKRIRKQVN | YNDASQEDQE | WQDELSDNQS | EYSIGSEDED |
1390 | 1400 | 1410 | 1420 | 1430 | 1440 |
EDFEERPEGQ | SGRRQSRRQL | KSDRDKPLPP | LLARVGGNIE | VLGFNARQRK | AFLNAIMRWG |
1450 | 1460 | 1470 | 1480 | 1490 | 1500 |
MPPQDAFNSH | WLVRDLRGKS | EKEFRAYVSL | FMRHLCEPGA | DGAETFADGV | PREGLSRQHV |
1510 | 1520 | 1530 | 1540 | 1550 | 1560 |
LTRIGVMSLV | RKKVQEFEHV | NGKYSTPDLI | PEGPEGKKSG | EVISSDPNTP | VPASPAHLLP |
1570 | 1580 | 1590 | 1600 | 1610 | 1620 |
APLGLPDKME | AQLGYMDEKD | PGAQKPRQPL | EVQALPAALD | RVESEDKHES | PASKERAREE |
1630 | 1640 | 1650 | 1660 | 1670 | 1680 |
RPEETEKAPP | SPEQLPREEV | LPEKEKILDK | LELSLIHSRG | DSSELRPDDT | KAEEKEPIET |
1690 | 1700 | 1710 | 1720 | 1730 | 1740 |
QQNGDKEEDD | EGKKEDKKGK | FKFMFNIADG | GFTELHTLWQ | NEERAAVSSG | KIYDIWHRRH |
1750 | 1760 | 1770 | 1780 | 1790 | 1800 |
DYWLLAGIVT | HGYARWQDIQ | NDPRYMILNE | PFKSEVHKGN | YLEMKNKFLA | RRFKLLEQAL |
1810 | 1820 | 1830 | 1840 | 1850 | 1860 |
VIEEQLRRAA | YLNMTQDPNH | PAMALNARLA | EVECLAESHQ | HLSKESLAGN | KPANAVLHKV |
1870 | 1880 | 1890 | 1900 | 1910 | 1920 |
LNQLEELLSD | MKADVTRLPS | MLSRIPPVAA | RLQMSERSIL | SRLTNRAGDP | TIQQGAFGSS |
1930 | 1940 | 1950 | |||
QMYSNNFGPN | FRGPGPGGIV | NYNQMPLGPY | VTDI |