Q7G8Y3
PR
Gene name |
Os01g0367900 (LOC_Os01g27040, B1329D01.23, OsJ_01780, P0043B10.9, P0560B06.13, P0784G04.20) |
Protein name |
Probable chromatin-remodeling complex ATPase chain |
Names |
ISW2-like, Sucrose nonfermenting protein 2 homolog |
Species |
Oryza sativa subsp japonica (Rice) |
KEGG Pathway |
osa:4325731 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q7G8Y3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q7G8Y3-F1 | Predicted | AlphaFoldDB |
No variants for Q7G8Y3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q7G8Y3 | |||||
No associated diseases with Q7G8Y3
9 regional properties for Q7G8Y3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | SNF2, N-terminal | 244 - 511 | IPR000330 |
| domain | SANT/Myb domain | 878 - 927 | IPR001005-1 |
| domain | SANT/Myb domain | 979 - 1041 | IPR001005-2 |
| domain | Helicase, C-terminal | 534 - 687 | IPR001650 |
| domain | Helicase superfamily 1/2, ATP-binding domain | 227 - 419 | IPR014001 |
| domain | ISWI, HAND domain | 795 - 874 | IPR015194 |
| domain | SLIDE domain | 935 - 1045 | IPR015195 |
| domain | SANT domain | 877 - 929 | IPR017884 |
| domain | Isw1/2, N-terminal | 228 - 448 | IPR044754 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
7 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATP-dependent activity, acting on DNA | Catalytic activity that acts to modify DNA, driven by ATP hydrolysis. |
| ATP-dependent chromatin remodeler activity | An activity, driven by ATP hydrolysis, that modulates the contacts between histones and DNA, resulting in a change in chromosome architecture within the nucleosomal array, leading to chromatin remodeling. |
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| helicase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix. |
| hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. |
| nucleosome binding | Binding to a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
14 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P38144 | ISW1 | ISWI chromatin-remodeling complex ATPase ISW1 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q3B7N1 | CHD1L | Chromodomain-helicase-DNA-binding protein 1-like | Bos taurus (Bovine) | SS |
| Q24368 | Iswi | Chromatin-remodeling complex ATPase chain Iswi | Drosophila melanogaster (Fruit fly) | SS |
| Q86WJ1 | CHD1L | Chromodomain-helicase-DNA-binding protein 1-like | Homo sapiens (Human) | EV |
| Q9NRZ9 | HELLS | Lymphoid-specific helicase | Homo sapiens (Human) | PR |
| O60264 | SMARCA5 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 | Homo sapiens (Human) | EV |
| P28370 | SMARCA1 | Probable global transcription activator SNF2L1 | Homo sapiens (Human) | SS |
| Q60848 | Hells | Lymphocyte-specific helicase | Mus musculus (Mouse) | PR |
| Q9CXF7 | Chd1l | Chromodomain-helicase-DNA-binding protein 1-like | Mus musculus (Mouse) | SS |
| Q91ZW3 | Smarca5 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 | Mus musculus (Mouse) | SS |
| Q6PGB8 | Smarca1 | Probable global transcription activator SNF2L1 | Mus musculus (Mouse) | SS |
| P41877 | isw-1 | Chromatin-remodeling complex ATPase chain isw-1 | Caenorhabditis elegans | SS |
| Q9XFH4 | DDM1 | ATP-dependent DNA helicase DDM1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8RWY3 | CHR11 | ISWI chromatin-remodeling complex ATPase CHR11 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAKPVKYDEE | EEEVSSSGEE | EEEQSDGAGS | GSGEEEDEEE | EEAPAAAAGE | AAGGEEEEVD |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EEEIEAVTTG | AGADEEEEES | GAAAAAPGEG | DEESQSTEDD | EAVVGEDDDA | DEAEGGAVVG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KREKARLKEM | QKLKKQKIQE | ILDTQNAAVD | ADMNNKGKGR | LKYLLQQTEI | FAHFAKGNQS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KEKKPRGRGR | HASKMTEEEE | DEEYLKEEED | ALAGSGGTRL | LSQPSCIKGK | MRDYQLAGLN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| WLIRLYENGI | NGILADEMGL | GKTLQTISLL | GYLHEFRGIT | GPHMVVAPKS | TLGNWIKEIQ |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RFCPILRAVK | FLGNPEERNH | IRENLLQPGK | FDVCVTSFEM | AIKEKTTLKR | FSWRYIIIDE |
| 370 | 380 | 390 | 400 | 410 | 420 |
| AHRIKNENSL | LSKTMRIYNT | NYRLLITGTP | LQNNLHELWS | LLNFLLPEIF | SSAETFDEWF |
| 430 | 440 | 450 | 460 | 470 | 480 |
| QISGENDQQE | VVQQLHKVLR | PFLLRRLKSD | VEKGLPPKKE | TILKVGMSQM | QKQYYRALLQ |
| 490 | 500 | 510 | 520 | 530 | 540 |
| KDLEVINAGG | ERKRLLNIAM | QLRKCCNHPY | LFQGAEPGPP | YTTGEHLVEN | AGKMVLLDKL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| LPKLKDRDSR | VLIFSQMTRL | LDILEDYLMY | RGYQYCRIDG | NTGGEDRDAS | IEAFNKPGSE |
| 610 | 620 | 630 | 640 | 650 | 660 |
| KFVFLLSTRA | GGLGINLATA | DVVVLYDSDW | NPQADLQAQD | RAHRIGQKKE | VQVFRFCTEY |
| 670 | 680 | 690 | 700 | 710 | 720 |
| TIEEKVIERA | YKKLALDALV | IQQGRLAEQK | TVNKDDLLQM | VRFGAEMVFS | SKDSTITDED |
| 730 | 740 | 750 | 760 | 770 | 780 |
| IDRIIAKGEE | TTAELDAKMK | KFTEDAIKFK | MDDTAELYDF | DDDKEENKLD | FKKLVSDNWI |
| 790 | 800 | 810 | 820 | 830 | 840 |
| EPPRRERKRN | YSESEYFKQA | LRQGAPAKPR | EPRIPRMPHL | HDFQFFNNQR | LNELYEKEVR |
| 850 | 860 | 870 | 880 | 890 | 900 |
| YLMQANQKKD | TIDGEDEDQL | EPLTAEEQEE | KEQLLEEGFA | TWTRRDFNTF | IRACEKYGRN |
| 910 | 920 | 930 | 940 | 950 | 960 |
| DIRSIAAEME | GKTEEEVQRY | AKVFKERYKE | LSDYDRIIKN | IERGEARISR | KDEIMRAIGK |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| KLDRYKNPWL | ELKIQYGQNK | GKFYNEECDR | FMLCMVHKLG | YGNWDELKAA | FRMSPLFRFD |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| WFVKSRTTQE | LARRCDTLIR | LVEKENQEYD | EQERQARKDK | RMAKNMTPTK | RSALRVSEGE |
| 1090 | 1100 | ||||
| TTPSNSFKRR | RQSLMDDYVG | SGRRKRG |