Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

1 structures for Q6UC88

Entry ID Method Resolution Chain Position Source
AF-Q6UC88-F1 Predicted AlphaFoldDB

25 variants for Q6UC88

Variant ID(s) Position Change Description Diseaes Association Provenance
rs134821996 30 I>L No EVA
rs452141209 39 M>V No EVA
rs475431631 41 V>A No EVA
rs437604621 44 V>G No EVA
rs457612834 57 A>S No EVA
rs443181689 86 S>G No EVA
rs469848507 162 L>M No EVA
rs519785581 185 A>V No EVA
rs523374902 188 L>P No EVA
rs801282579 211 A>T No EVA
rs722954404 212 V>I No EVA
rs797303452 218 S>L No EVA
rs458724404 244 A>V No EVA
rs476648124 248 F>V No EVA
rs435459203 253 G>V No EVA
rs455664505 257 C>G No EVA
rs472352299 261 R>G No EVA
rs443846963 262 Y>C No EVA
rs463813650 270 N>Y No EVA
rs459728965 283 V>A No EVA
rs479899890 287 K>Q No EVA
rs445096975 296 E>D No EVA
rs465223077 300 M>I No EVA
rs519977580 303 T>M No EVA
rs436916380 305 E>D No EVA

No associated diseases with Q6UC88

6 regional properties for Q6UC88

Type Name Position InterPro Accession
conserved_site Helix-turn-helix motif 154 - 179 IPR000047
domain Homeobox domain 123 - 187 IPR001356
conserved_site Homeobox, conserved site 158 - 181 IPR017970
domain Homeobox domain, metazoa 147 - 158 IPR020479-1
domain Homeobox domain, metazoa 162 - 181 IPR020479-2
domain Distal-less-like homeobox protein, N-terminal domain 28 - 104 IPR022135

Functions

Description
EC Number
Subcellular Localization
  • Membrane ; Single-pass membrane protein
  • Localized to the plasma membrane and in vesicles near extranuclear membranes which may represent trans-Golgi network (TGN) and endosomes/prelysosomeal compartments
  • Undergoes ligand-dependent internalization and recycling at the cell surface (By similarity)
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

3 GO annotations of molecular function

Name Definition
cargo receptor activity Binding specifically to a substance (cargo) to deliver it to a transport vesicle. Cargo receptors span a membrane (either the plasma membrane or a vesicle membrane), binding simultaneously to cargo molecules and coat adaptors, to efficiently recruit soluble proteins to nascent vesicles.
hyaluronic acid binding Binding to hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine.
transmembrane signaling receptor activity Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction.

4 GO annotations of biological process

Name Definition
cell adhesion The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
hyaluronan catabolic process The chemical reactions and pathways resulting in the breakdown of hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine.
positive regulation of cellular extravasation Any process that activates or increases the frequency, rate, or extent of cellular extravasation.
receptor-mediated endocytosis An endocytosis process in which cell surface receptors ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles.

4 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q9Y5Y7 LYVE1 Lymphatic vessel endothelial hyaluronic acid receptor 1 Homo sapiens (Human) PR
P98066 TNFAIP6 Tumor necrosis factor-inducible gene 6 protein Homo sapiens (Human) PR
Q8BHC0 Lyve1 Lymphatic vessel endothelial hyaluronic acid receptor 1 Mus musculus (Mouse) PR
O08859 Tnfaip6 Tumor necrosis factor-inducible gene 6 protein Mus musculus (Mouse) PR
10 20 30 40 50 60
MAKFFSLGLL LASIWTTRLL VQGSLRSEEI SILGPCRIMG VTLVTKKTQP LLNFTEAQEA
70 80 90 100 110 120
CRLVGLTLAS QDQVEEARKF GFETCSYGWV KNQFVVIPRI ISNPKCGKSG VGVVIWRSSL
130 140 150 160 170 180
SSRHRSYCHN SSDIWINSCL PEIITTDDPL FNTETATYTT KLMVSDSTHS ELSTDGPDYV
190 200 210 220 230 240
TTTVAPPLAS TSTPRKRKLI CITEAFMDTS AVATERESDI QNRPAFKNEA VGFGGVPTAL
250 260 270 280 290 300
LVLALLFFAA AAGLAVCYVK RYVKAFPFTN KNQQKEMIET KVVKEEKADD SNPNEESKKM
310 320
NKTPEEPKSP PKTTVRCLEA EV