Q655V4

PR
Gene name
MADS30 (Os06g0667200, LOC_Os06g45650, P0637D03.37)
Protein name
MADS-box transcription factor 30
Names
OsMADS30
Species
Oryza sativa subsp japonica (Rice)
KEGG Pathway
osa:4341786
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

94-177 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q655V4

Entry ID Method Resolution Chain Position Source
AF-Q655V4-F1 Predicted AlphaFoldDB

No variants for Q655V4

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q655V4

No associated diseases with Q655V4

3 regional properties for Q655V4

Type Name Position InterPro Accession
domain Transcription factor, MADS-box 1 - 61 IPR002100
domain Transcription factor, K-box 84 - 178 IPR002487
domain MADS MEF2-like 2 - 72 IPR033896

Functions

Description
EC Number
Subcellular Localization
  • Nucleus
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

3 GO annotations of molecular function

Name Definition
DNA-binding transcription factor activity, RNA polymerase II-specific A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II.
protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
RNA polymerase II cis-regulatory region sequence-specific DNA binding Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II.

2 GO annotations of biological process

Name Definition
positive regulation of transcription by RNA polymerase II Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
regulation of transcription by RNA polymerase II Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.

17 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
A2VDZ3 MEF2A Myocyte-specific enhancer factor 2A Bos taurus (Bovine) SS
Q9W6U8 MEF2A Myocyte-specific enhancer factor 2A Gallus gallus (Chicken) SS
Q06413 MEF2C Myocyte-specific enhancer factor 2C Homo sapiens (Human) EV
Q02078 MEF2A Myocyte-specific enhancer factor 2A Homo sapiens (Human) SS
Q8CFN5 Mef2c Myocyte-specific enhancer factor 2C Mus musculus (Mouse) SS
Q60929 Mef2a Myocyte-specific enhancer factor 2A Mus musculus (Mouse) SS
A4UTP7 MEF2C Myocyte-specific enhancer factor 2C Sus scrofa (Pig) SS
A2ICN5 MEF2A Myocyte-specific enhancer factor 2A Sus scrofa (Pig) SS
A0A096MJY4 Mef2c Myocyte-specific enhancer factor 2C Rattus norvegicus (Rat) SS
Q2MJT0 Mef2a Myocyte-specific enhancer factor 2A Rattus norvegicus (Rat) SS
Q40702 MADS2 MADS-box transcription factor 2 Oryza sativa subsp japonica (Rice) PR
Q5K4R0 MADS47 MADS-box transcription factor 47 Oryza sativa subsp japonica (Rice) PR
Q1PFA4 AGL30 Agamous-like MADS-box protein AGL30 Arabidopsis thaliana (Mouse-ear cress) PR
P29383 AGL3 Agamous-like MADS-box protein AGL3 Arabidopsis thaliana (Mouse-ear cress) PR
P35632 AP3 Floral homeotic protein APETALA 3 Arabidopsis thaliana (Mouse-ear cress) PR
Q683D7 MAF5 Protein MADS AFFECTING FLOWERING 5 Arabidopsis thaliana (Mouse-ear cress) PR
Q9FUY6 J MADS-box protein JOINTLESS Solanum lycopersicum (Tomato) (Lycopersicon esculentum) PR
10 20 30 40 50 60
MGQGKIEMKR IEDATRRQVT FSKRRAGFLK KANELAVLCD AQVGVVVFSD KGKLFDFCSP
70 80 90 100 110 120
PVILMELFHR YEITTRNTRL QETNRDDEQM VMEITRLRNE IDQLEASLRR QTGEDLSSVS
130 140 150 160 170 180
TVDELSQLQL QLESSLSKVH ARKDELMSQQ LEDMRRMHQT VHEQNNFLCR MVTKILLLNV
190 200 210 220
ITIMILAAMI SITHARIALD DCMQLGYIVI KQENSWRFWF I