Q5K5B6

PR
Gene name
Os07g0647900 (LOC_Os07g45360, OJ1316_A04.119, OsJ_25369, P0427D10.102)
Protein name
DEAD-box ATP-dependent RNA helicase 57
Names
Species
Oryza sativa subsp japonica (Rice)
KEGG Pathway
osa:4344113
EC number
3.6.4.13: Acting on ATP; involved in cellular and subcellular movement
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-148 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q5K5B6

Entry ID Method Resolution Chain Position Source
AF-Q5K5B6-F1 Predicted AlphaFoldDB

No variants for Q5K5B6

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q5K5B6

No associated diseases with Q5K5B6

4 regional properties for Q5K5B6

Type Name Position InterPro Accession
domain AAA+ ATPase domain 282 - 418 IPR003593
domain ATPase, AAA-type, core 286 - 415 IPR003959
conserved_site ATPase, AAA-type, conserved site 388 - 407 IPR003960
domain AAA ATPase, AAA+ lid domain 444 - 494 IPR041569

Functions

Description
EC Number 3.6.4.13 Acting on ATP; involved in cellular and subcellular movement
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

4 GO annotations of molecular function

Name Definition
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
ATP hydrolysis activity Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.
RNA binding Binding to an RNA molecule or a portion thereof.
RNA helicase activity Unwinding of an RNA helix, driven by ATP hydrolysis.

1 GO annotations of biological process

Name Definition
maturation of SSU-rRNA Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule.

8 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
P45818 ROK1 ATP-dependent RNA helicase ROK1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) PR
Q6Z2Z4 Os02g0146600 Eukaryotic initiation factor 4A-3 Oryza sativa subsp japonica (Rice) PR
P35683 Os06g0701100 Eukaryotic initiation factor 4A-1 Oryza sativa subsp japonica (Rice) PR
Q7Y183 RH10 DEAD-box ATP-dependent RNA helicase 10 Oryza sativa subsp japonica (Rice) PR
Q8L4E9 Os07g0633500 DEAD-box ATP-dependent RNA helicase 36 Oryza sativa subsp japonica (Rice) PR
Q0DBS1 Os06g0535100 Putative DEAD-box ATP-dependent RNA helicase 51 Oryza sativa subsp japonica (Rice) PR
Q0D622 Os07g0517000 DEAD-box ATP-dependent RNA helicase 32 Oryza sativa subsp japonica (Rice) PR
Q84TG1 RH57 DEAD-box ATP-dependent RNA helicase 57 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MEKAKLSSAL FAGTHFDRKR FAGDFARFRQ GPPAPDVASA AAPSPEKKRK RQSKAKAKKS
70 80 90 100 110 120
KKRRAEGADS ASDAVEGFSV FKGLAAKKDE DDSEKKVETG KSEDSEVVRR RKEVEREIER
130 140 150 160 170 180
AAILRKKFDI HISGQNVPAP LENFEELVSR YGCDSYLVGN LSKLGFQEPT PIQRQAIPIL
190 200 210 220 230 240
LSGRECFACA PTGSGKTLAF LFPILMKIKP GSKEGVKAVI LCPTRELAAQ TTRECKKLAK
250 260 270 280 290 300
GRKFYIKLMT KDLSKSGNFK DMHCDILIST PLRLDHAVQK RDLDLSRVEY LVLDESDKLF
310 320 330 340 350 360
ELGFVEVIDS VVKACSNPSI IRSLFSATLP DSIETLARTI MHDAVRVIVG RKNSASSLIK
370 380 390 400 410 420
QKLIFAGTEK GKLLALRQSF AESLNPPVLI FVQSKERAKE LYKELAFDDV RADVIHADLD
430 440 450 460 470 480
EEQRQDAVDN LRAGKTWVLI ATEVIARGMD FKGVNCVINY DFPESASAYI HRIGRSGRAG
490 500 510 520 530
RSGEAITFFT EEDKPFLRNI ANVLISSGCE VPSWIKALPK LKRKKHRVNR DPISTLPDED