Q39214
PR
Gene name |
RPM1 |
Protein name |
Disease resistance protein RPM1 |
Names |
Resistance to Pseudomonas syringae protein 3, Resistance to Pseudomonas syringae pv. Maculicola protein 1 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G07040 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q39214
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q39214-F1 | Predicted | AlphaFoldDB |
63 variants for Q39214
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_3_2228929_A_C | 32 | D>E | No | 1000Genomes | |
| tmp_3_2228762_T_A | 88 | H>L | No | 1000Genomes | |
| tmp_3_2228745_T_A | 94 | S>C | No | 1000Genomes | |
| ENSVATH05788463 | 97 | K>N | No | 1000Genomes | |
| ENSVATH10536958 | 99 | W>* | No | 1000Genomes | |
| ENSVATH05788462 | 106 | R>K | No | 1000Genomes | |
| ENSVATH10536956 | 106 | R>W | No | 1000Genomes | |
| ENSVATH00310511 | 116 | Q>K | No | 1000Genomes | |
| tmp_3_2228669_C_T | 119 | G>E | No | 1000Genomes | |
| tmp_3_2228628_T_C | 133 | K>E | No | 1000Genomes | |
| ENSVATH13881483 | 144 | A>V | No | 1000Genomes | |
| tmp_3_2228454_G_T | 191 | P>T | No | 1000Genomes | |
| ENSVATH00310508 | 215 | K>Q | No | 1000Genomes | |
| tmp_3_2228375_T_A | 217 | Q>L | No | 1000Genomes | |
| tmp_3_2228322_A_C | 235 | Y>D | No | 1000Genomes | |
| ENSVATH05788457 | 257 | P>R | No | 1000Genomes | |
| tmp_3_2228235_C_G | 264 | G>R | No | 1000Genomes | |
| tmp_3_2228165_T_A | 287 | D>V | No | 1000Genomes | |
| tmp_3_2228121_G_A | 302 | P>S | No | 1000Genomes | |
| ENSVATH13881482 | 304 | G>V | No | 1000Genomes | |
| tmp_3_2228082_G_A | 315 | R>W | No | 1000Genomes | |
| tmp_3_2228034_G_A | 331 | H>Y | No | 1000Genomes | |
| ENSVATH10536915 | 375 | G>D | No | 1000Genomes | |
| tmp_3_2227820_G_C | 402 | T>S | No | 1000Genomes | |
| ENSVATH00310506 | 403 | L>* | Following inoculation of two leaves per plant with 0.1 ml of 10 -8 cfu/ml bacteria in 10 mm mgso4 buffer using a blunt-tipped syringe. leaf collapse was scored at 20 hrs and again at 24 hrs after inoculation [20c and 12 hrs daylight] [EnsemblGenome] | No | 1000Genomes |
| tmp_3_2227798_G_C | 409 | N>K | No | 1000Genomes | |
| ENSVATH10536884 | 418 | S>T | No | 1000Genomes | |
| tmp_3_2227623_C_T | 468 | V>M | No | 1000Genomes | |
| tmp_3_2227545_G_A | 494 | P>S | No | 1000Genomes | |
| tmp_3_2227485_C_T | 514 | V>I | No | 1000Genomes | |
| tmp_3_2227460_T_A | 522 | D>V | No | 1000Genomes | |
| ENSVATH13881480 | 535 | E>G | No | 1000Genomes | |
| ENSVATH00310505 | 541 | G>S | No | 1000Genomes | |
| tmp_3_2227337_G_A | 563 | S>F | No | 1000Genomes | |
| tmp_3_2227289_C_T | 579 | S>N | No | 1000Genomes | |
| ENSVATH10536882 | 585 | A>V | No | 1000Genomes | |
| ENSVATH05788454 | 612 | S>P | No | 1000Genomes | |
| tmp_3_2227184_G_T | 614 | T>K | No | 1000Genomes | |
| tmp_3_2227145_A_G | 627 | V>A | No | 1000Genomes | |
| tmp_3_2227139_A_G | 629 | L>S | No | 1000Genomes | |
| tmp_3_2227110_T_A | 639 | I>F | No | 1000Genomes | |
| tmp_3_2227101_G_A | 642 | L>F | No | 1000Genomes | |
| ENSVATH00310504 | 662 | E>D | No | 1000Genomes | |
| tmp_3_2227018_A_T | 669 | N>K | No | 1000Genomes | |
| tmp_3_2226944_G_A | 694 | A>V | No | 1000Genomes | |
| ENSVATH13881478 | 697 | E>G | No | 1000Genomes | |
| ENSVATH10536879 | 698 | L>I | No | 1000Genomes | |
| ENSVATH05788452 | 701 | N>H | No | 1000Genomes | |
| ENSVATH00310502 | 703 | G>W | No | 1000Genomes | |
| tmp_3_2226752_C_A | 758 | S>I | No | 1000Genomes | |
| ENSVATH05788451 | 761 | K>* | No | 1000Genomes | |
| ENSVATH13881477 | 772 | P>S | No | 1000Genomes | |
| tmp_3_2226690_G_C | 779 | Q>E | No | 1000Genomes | |
| ENSVATH13881476 | 820 | R>H | No | 1000Genomes | |
| tmp_3_2226522_G_A | 835 | Q>* | No | 1000Genomes | |
| tmp_3_2226500_A_T | 842 | V>D | No | 1000Genomes | |
| ENSVATH05788449 | 877 | Q>* | No | 1000Genomes | |
| tmp_3_2226392_T_G | 878 | E>A | No | 1000Genomes | |
| tmp_3_2226393_C_G | 878 | E>Q | No | 1000Genomes | |
| tmp_3_2226357_C_T | 890 | E>K | No | 1000Genomes | |
| tmp_3_2226353_C_G | 891 | R>P | No | 1000Genomes | |
| tmp_3_2226332_A_C | 898 | V>G | No | 1000Genomes | |
| ENSVATH13881454 | 901 | S>P | No | 1000Genomes |
No associated diseases with Q39214
5 regional properties for Q39214
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Homeobox domain | 143 - 207 | IPR001356 |
| conserved_site | Homeobox protein, antennapedia type, conserved site | 134 - 139 | IPR001827 |
| conserved_site | Homeobox, conserved site | 178 - 201 | IPR017970 |
| domain | Homeobox domain, metazoa | 167 - 178 | IPR020479-1 |
| domain | Homeobox domain, metazoa | 182 - 201 | IPR020479-2 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| endomembrane system | A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. |
| extrinsic component of plasma membrane | The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| ADP binding | Binding to ADP, adenosine 5'-diphosphate. |
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| nucleotide binding | Binding to a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| plant-type hypersensitive response | The rapid, localized death of plant cells in response to invasion by a pathogen. |
21 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| F1MHT9 | NLRC4 | NLR family CARD domain-containing protein 4 | Bos taurus (Bovine) | SS |
| O14727 | APAF1 | Apoptotic protease-activating factor 1 | Homo sapiens (Human) | EV |
| Q9NPP4 | NLRC4 | NLR family CARD domain-containing protein 4 | Homo sapiens (Human) | SS |
| Q3UP24 | Nlrc4 | NLR family CARD domain-containing protein 4 | Mus musculus (Mouse) | EV |
| F1M649 | Nlrc4 | NLR family CARD domain-containing protein 4 | Rattus norvegicus (Rat) | SS |
| O22727 | At1g61190 | Probable disease resistance protein At1g61190 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O64790 | At1g61300 | Probable disease resistance protein At1g61300 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O64973 | RPS5 | Disease resistance protein RPS5 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0C8S1 | RPP8L2 | Probable disease resistance RPP8-like protein 2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P60838 | SUMM2 | Disease resistance protein SUMM2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q38834 | RPP13L4 | Disease resistance RPP13-like protein 4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8W3K3 | At1g58400 | Putative disease resistance protein At1g58400 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C646 | RXW24L | Probable disease resistance protein RXW24L | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FJB5 | RPP8L3 | Disease resistance RPP8-like protein 3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LRR4 | RPPL1 | Putative disease resistance RPP13-like protein 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9T048 | At4g27190 | Disease resistance protein At4g27190 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9XIF0 | At1g59780 | Putative disease resistance protein At1g59780 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| F4J339 | RPP1 | Probable disease resistance protein RPP1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O64789 | At1g61310 | Probable disease resistance protein At1g61310 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q940K0 | UNI | Disease resistance protein UNI | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9I9H8 | apaf1 | Apoptotic protease-activating factor 1 | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MASATVDFGI | GRILSVLENE | TLLLSGVHGE | IDKMKKELLI | MKSFLEDTHK | HGGNGSTTTT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| TQLFQTFVAN | TRDLAYQIED | ILDEFGYHIH | GYRSCAKIWR | AFHFPRYMWA | RHSIAQKLGM |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VNVMIQSISD | SMKRYYHSEN | YQAALLPPID | DGDAKWVNNI | SESSLFFSEN | SLVGIDAPKG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KLIGRLLSPE | PQRIVVAVVG | MGGSGKTTLS | ANIFKSQSVR | RHFESYAWVT | ISKSYVIEDV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FRTMIKEFYK | EADTQIPAEL | YSLGYRELVE | KLVEYLQSKR | YIVVLDDVWT | TGLWREISIA |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LPDGIYGSRV | MMTTRDMNVA | SFPYGIGSTK | HEIELLKEDE | AWVLFSNKAF | PASLEQCRTQ |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NLEPIARKLV | ERCQGLPLAI | ASLGSMMSTK | KFESEWKKVY | STLNWELNNN | HELKIVRSIM |
| 430 | 440 | 450 | 460 | 470 | 480 |
| FLSFNDLPYP | LKRCFLYCSL | FPVNYRMKRK | RLIRMWMAQR | FVEPIRGVKA | EEVADSYLNE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LVYRNMLQVI | LWNPFGRPKA | FKMHDVIWEI | ALSVSKLERF | CDVYNDDSDG | DDAAETMENY |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GSRHLCIQKE | MTPDSIRATN | LHSLLVCSSA | KHKMELLPSL | NLLRALDLED | SSISKLPDCL |
| 610 | 620 | 630 | 640 | 650 | 660 |
| VTMFNLKYLN | LSKTQVKELP | KNFHKLVNLE | TLNTKHSKIE | ELPLGMWKLK | KLRYLITFRR |
| 670 | 680 | 690 | 700 | 710 | 720 |
| NEGHDSNWNY | VLGTRVVPKI | WQLKDLQVMD | CFNAEDELIK | NLGCMTQLTR | ISLVMVRREH |
| 730 | 740 | 750 | 760 | 770 | 780 |
| GRDLCDSLNK | IKRIRFLSLT | SIDEEEPLEI | DDLIATASIE | KLFLAGKLER | VPSWFNTLQN |
| 790 | 800 | 810 | 820 | 830 | 840 |
| LTYLGLRGSQ | LQENAILSIQ | TLPRLVWLSF | YNAYMGPRLR | FAQGFQNLKI | LEIVQMKHLT |
| 850 | 860 | 870 | 880 | 890 | 900 |
| EVVIEDGAMF | ELQKLYVRAC | RGLEYVPRGI | ENLINLQELH | LIHVSNQLVE | RIRGEGSVDR |
| 910 | 920 | ||||
| SRVKHIPAIK | HYFRTDNGSF | YVSLSS |