Q2KHK6

SS
Gene name
Gsdmc2
Protein name
Gasdermin-C2
Names
Species
Mus musculus (Mouse)
KEGG Pathway
mmu:331063
EC number
Protein Class

Descriptions

Gasdermin proteins are a pore-forming protein causing membrane permeabilization and pyroptosis, and functions downstream of the inflammatory caspases. The C-terminal gasdermin domain may adopt an intramolecular complex with the N-terminal domain, which may inhibit the activation of the N-terminal gasdermin domain as observed in GSDMD.

Autoinhibitory domains (AIDs)

270-441 (C-terminal gasdermin domain) SS

Target domain

5-232 (N-terminal gasdermin domain)

Relief mechanism

Cleavage

Assay

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q2KHK6

Entry ID Method Resolution Chain Position Source
AF-Q2KHK6-F1 Predicted AlphaFoldDB

9 variants for Q2KHK6

Variant ID(s) Position Change Description Diseaes Association Provenance
rs579437847 246 I>T No Ensembl
rs586704464 247 Y>S No Ensembl
rs583059385 250 E>Q No Ensembl
rs864293245 251 L>F No Ensembl
rs581778296 354 L>P No Ensembl
rs241742155 375 Q>R No Ensembl
rs1134277916 387 E>A No Ensembl
rs252605414 407 L>V No Ensembl
rs1135348662 465 R>Q No Ensembl

No associated diseases with Q2KHK6

2 regional properties for Q2KHK6

Type Name Position InterPro Accession
domain Gasdermin, pore forming domain 5 - 232 IPR040460
domain Gasdermin, PUB domain 270 - 440 IPR041263

Functions

Description
EC Number
Subcellular Localization
  • [Gasdermin-C2]: Cytoplasm, cytosol
  • ;
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

4 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
cytosol The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

3 GO annotations of molecular function

Name Definition
phosphatidylinositol-4,5-bisphosphate binding Binding to phosphatidylinositol-4,5-bisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' and 5' positions.
phosphatidylinositol-4-phosphate binding Binding to phosphatidylinositol-4-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' position.
phosphatidylserine binding Binding to phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine.

3 GO annotations of biological process

Name Definition
defense response to bacterium Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
intestinal epithelial cell development The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell of the intestine over time, from its formation to the mature structure.
pyroptosis A caspase-1-dependent cell death subroutine that is associated with the generation of pyrogenic mediators such as IL-1beta and IL-18.

12 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
P57764 GSDMD Gasdermin-D Homo sapiens (Human) EV
Q96QA5 GSDMA Gasdermin-A Homo sapiens (Human) SS
Q9BYG8 GSDMC Gasdermin-C Homo sapiens (Human) SS
Q8TAX9 GSDMB Gasdermin-B Homo sapiens (Human) EV
Q8CB12 Gsdmc3 Gasdermin-C3 Mus musculus (Mouse) SS
Q3TR54 Gsdmc4 Gasdermin-C4 Mus musculus (Mouse) SS
Q5Y4Y6 Gsdma3 Gasdermin-A3 Mus musculus (Mouse) EV
Q99NB5 Gsdmc Gasdermin-C Mus musculus (Mouse) SS
Q9D8T2 Gsdmd Gasdermin-D Mus musculus (Mouse) SS
Q9EST1 Gsdma Gasdermin-A Mus musculus (Mouse) SS
Q32M21 Gsdma2 Gasdermin-A2 Mus musculus (Mouse) SS
P85967 Gsdmc Gasdermin-C Rattus norvegicus (Rat) SS
10 20 30 40 50 60
MGYSFDRASK DVVKKLQGRD LRPVECLSDA TKFRLFHILQ ETPRSGWETE DIPVGFTLLD
70 80 90 100 110 120
LLEPNFPVPE PEVSAPKPFI HVQSTDLEAN LNVADIARGG VGYVGYGGYN IEVQSTSIPN
130 140 150 160 170 180
PKLEILQNRK LLDNLPTFMK FCRMERKNLY VVTEAYEVSK DTMLTGLSSV NLSVKGFFKQ
190 200 210 220 230 240
LFKVRGKAGR SEKYSIPIPK GSVLAYKKQQ LVIENNTCVI LPSATKKKMT FPGTPKYASA
250 260 270 280 290 300
SEPTEIYRTE LQGLWINDIV PIGRIQEPAH LDFMCLQNEV YKQTEQLAEL SKGVQEVVLS
310 320 330 340 350 360
SILSMLYEGD RKVLYDLMNM LELNQLGHMD GPGGKILDEL RKDSSNPCVD LKDLILYLLQ
370 380 390 400 410 420
ALMVLSDSQL NLLAQSVEMG ILPHQVELVK SILQPNFKYP WNIPFTLQPQ LLAPLQGEGL
430 440 450 460 470
AITYELLEEC GLKMELNNPR STWDLEAKMP LSALYGSLSF LQQLRKANSS SKPSLRPGYI