Q23489
Gene name |
nhr-9 (ZK418.1) |
Protein name |
Nuclear hormone receptor family member nhr-9 |
Names |
|
Species |
Caenorhabditis elegans |
KEGG Pathway |
cel:CELE_ZK418.1 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q23489
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q23489-F1 | Predicted | AlphaFoldDB |
No variants for Q23489
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q23489 | |||||
No associated diseases with Q23489
7 regional properties for Q23489
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | 205 - 533 | IPR001394 |
| domain | MATH/TRAF domain | 39 - 179 | IPR002083 |
| conserved_site | Ubiquitin specific protease, conserved site | 206 - 221 | IPR018200-1 |
| conserved_site | Ubiquitin specific protease, conserved site | 449 - 466 | IPR018200-2 |
| domain | Ubiquitin carboxyl-terminal hydrolase 7, ICP0-binding domain | 649 - 936 | IPR024729 |
| domain | Ubiquitin specific protease domain | 205 - 536 | IPR028889 |
| domain | Ubiquitin carboxyl-terminal hydrolase, C-terminal | 966 - 1217 | IPR029346 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
| sequence-specific DNA binding | Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
| zinc ion binding | Binding to a zinc ion (Zn). |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
3 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| O17931 | nhr-197 | Nuclear hormone receptor family member nhr-197 | Caenorhabditis elegans | PR |
| O17928 | nhr-52 | Nuclear hormone receptor family member nhr-52 | Caenorhabditis elegans | PR |
| O17930 | nhr-268 | Nuclear hormone receptor family member nhr-268 | Caenorhabditis elegans | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MITQIGSTSS | ERRCAICSKL | GNSYNYGVLS | CNACKMFFRR | ATLGKSEKFC | INNDNCDTSN |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LILTCRQCRY | NKCLKMGMRI | VTNQYDSLDD | IIKVLAKWNL | DRSNKLMNFQ | CFEDPTLDQV |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IQKHPVFTKK | PSNLSFSKSE | WGFMEQLTTV | EFMSKFEFTR | HLFSEDFRIV | LKSSCFKIAS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| FIKAVRSYSM | KKEDIRYPDG | ELIVPMELVP | FCTSEFLARV | QCRLIGRIIE | LKLKEEEFLL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LIAIFVCDPT | ANNLTARGRE | ILSFHQNVYN | DALLQLCLRN | EGSCGPARFN | DLLSVCHVVN |
| 310 | 320 | 330 | |||
| KHVEDIGQLC | FMFSFHPPTT | KYKRLCAELL | GA |