Q14161
Gene name |
GIT2 (KIAA0148) |
Protein name |
ARF GTPase-activating protein GIT2 |
Names |
ARF GAP GIT2 , Cool-interacting tyrosine-phosphorylated protein 2 , CAT-2 , CAT2 , G protein-coupled receptor kinase-interactor 2 , GRK-interacting protein 2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:9815 |
EC number |
|
Protein Class |
|

Descriptions
Autoinhibitory domains (AIDs)
Target domain |
259-349 (C-terminal SHD domain) |
Relief mechanism |
Partner binding, PTM |
Assay |
|
Accessory elements
No accessory elements
References
- Yeon JH et al. (2016) "Systems-wide Identification of cis-Regulatory Elements in Proteins", Cell systems, 2, 89-100
- Totaro A et al. (2007) "Identification of an intramolecular interaction important for the regulation of GIT1 functions", Molecular biology of the cell, 18, 5124-38
- Di Cesare A et al. (2000) "p95-APP1 links membrane transport to Rac-mediated reorganization of actin", Nature cell biology, 2, 521-30
Autoinhibited structure

Activated structure

1 structures for Q14161
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
AF-Q14161-F1 | Predicted | AlphaFoldDB |
489 variants for Q14161
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
CA386655966 rs1380827522 |
2 | S>L | No |
ClinGen TOPMed |
|
CA386655948 rs1449164125 |
4 | R>Q | No |
ClinGen TOPMed |
|
rs974819421 CA243478224 |
4 | R>W | No |
ClinGen Ensembl |
|
rs1310071512 CA386655939 |
5 | L>P | No |
ClinGen TOPMed |
|
rs1312965247 CA386655933 |
6 | R>Q | No |
ClinGen gnomAD |
|
rs747587627 CA6782220 |
6 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1377901258 CA386655885 |
11 | C>F | No |
ClinGen gnomAD |
|
CA386655875 rs1444105226 |
12 | A>V | No |
ClinGen gnomAD |
|
rs1352605587 CA386655848 |
16 | G>W | No |
ClinGen gnomAD |
|
rs758994044 CA6782202 |
18 | D>G | No |
ClinGen ExAC gnomAD |
|
rs1362894472 CA386655800 |
21 | W>C | No |
ClinGen Ensembl |
|
CA6782200 rs770508761 |
25 | N>S | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 27 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
COSM934900 CA6782199 COSM1586167 rs748964121 |
28 | T>M | Variant assessed as Somatic; 4.623e-05 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA386655742 rs1452428901 |
30 | L>F | No |
ClinGen TOPMed |
|
TCGA novel | 30 | L>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs566314773 CA6782197 |
32 | D>G | No |
ClinGen 1000Genomes ExAC |
|
CA386655721 rs1213774699 |
33 | E>G | No |
ClinGen gnomAD |
|
CA386655697 rs1373388933 |
36 | S>I | No |
ClinGen TOPMed |
|
rs1170274739 CA386655699 |
36 | S>R | No |
ClinGen TOPMed |
|
rs748658596 CA6782196 |
39 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA386655677 rs1279664612 |
39 | R>W | No |
ClinGen TOPMed gnomAD |
|
rs1440996987 CA386655655 |
43 | R>C | No |
ClinGen TOPMed |
|
TCGA novel | 43 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA386655650 rs1281281771 |
43 | R>L | No |
ClinGen gnomAD |
|
rs755564997 CA6782194 |
44 | H>Q | No |
ClinGen ExAC gnomAD |
|
CA6782193 rs747018566 |
45 | I>V | No |
ClinGen ExAC gnomAD |
|
rs750658561 CA6782190 |
55 | P>L | No |
ClinGen ExAC gnomAD |
|
rs1471154379 CA386655573 |
55 | P>S | No |
ClinGen gnomAD |
|
rs755822981 CA6782188 |
57 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA386655560 rs755822981 |
57 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs201015987 CA6782186 |
59 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs201015987 CA386655548 |
59 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1315090330 CA386679004 |
63 | M>V | No |
ClinGen gnomAD |
|
rs781035086 CA6782164 |
64 | V>I | No |
ClinGen ExAC gnomAD |
|
CA6782163 rs754899990 |
65 | E>D | No |
ClinGen ExAC gnomAD |
|
CA243529033 rs1007625947 |
65 | E>Q | No |
ClinGen TOPMed |
|
rs1335719856 CA386678983 |
66 | T>S | No |
ClinGen gnomAD |
|
rs1399150292 CA386678963 |
69 | N>D | No |
ClinGen TOPMed gnomAD |
|
rs1055314397 CA243529025 |
69 | N>T | No |
ClinGen Ensembl |
|
rs765883365 CA386678949 |
71 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6782161 rs765883365 |
71 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1165526620 CA386678944 |
72 | A>T | No |
ClinGen gnomAD |
|
rs1211364955 CA386678930 |
74 | S>T | No |
ClinGen TOPMed |
|
CA386678924 rs1421376557 |
75 | I>L | No |
ClinGen gnomAD |
|
rs749972562 CA6782159 |
75 | I>M | No |
ClinGen ExAC gnomAD |
|
rs764739299 CA6782158 |
77 | E>D | No |
ClinGen ExAC gnomAD |
|
CA386678846 rs941723847 CA243528982 |
80 | L>F | No |
ClinGen TOPMed gnomAD |
|
rs1566021584 CA386678816 |
83 | P>L | No |
ClinGen Ensembl |
|
rs138452227 CA243528980 |
83 | P>S | No |
ClinGen ESP TOPMed gnomAD |
|
rs907541844 CA243528976 |
84 | A>T | No |
ClinGen Ensembl |
|
rs761624188 CA6782157 |
84 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA243528963 rs983481505 |
85 | S>Y | No |
ClinGen TOPMed |
|
rs761231664 CA6782154 |
86 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6782153 rs776096824 |
87 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1402036402 CA386678791 |
88 | S>G | No |
ClinGen TOPMed |
|
rs954477305 CA243528953 |
88 | S>I | No |
ClinGen TOPMed |
|
rs954477305 CA386678788 |
88 | S>N | No |
ClinGen TOPMed |
|
CA386678770 rs1239238094 |
91 | R>C | No |
ClinGen gnomAD |
|
CA386678769 rs1337166297 |
91 | R>H | No |
ClinGen gnomAD |
|
CA386678767 rs1337166297 |
91 | R>L | No |
ClinGen gnomAD |
|
rs772653544 CA6782152 |
93 | A>S | No |
ClinGen ExAC gnomAD |
|
rs745873970 CA6782151 |
94 | N>Y | No |
ClinGen ExAC gnomAD |
|
rs1366703648 CA386678723 |
98 | K>E | No |
ClinGen gnomAD |
|
CA6782150 rs779052104 |
99 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA386678679 rs1465475432 |
102 | N>K | No |
ClinGen TOPMed |
|
rs779904959 CA6782122 |
102 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs112218265 CA6782120 |
104 | A>E | No |
ClinGen ExAC gnomAD |
|
rs758253720 CA6782121 |
104 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs112218265 CA243528480 |
104 | A>V | No |
ClinGen ExAC gnomAD |
|
CA386678664 rs1566020181 |
105 | E>A | No |
ClinGen Ensembl |
|
CA386678667 rs1246072432 |
105 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA386678652 rs1226296586 |
106 | F>L | No |
ClinGen gnomAD |
|
rs1448298275 CA386678630 |
110 | K>E | No |
ClinGen gnomAD |
|
rs763779421 CA6782116 |
112 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA386678605 rs1323816937 |
113 | M>K | No |
ClinGen gnomAD |
|
rs755828002 CA6782115 |
115 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs371458058 CA6782112 |
117 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA386678571 rs1432969804 |
118 | H>R | No |
ClinGen gnomAD |
|
rs774964809 CA6782111 |
119 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs766905782 CA6782110 |
119 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA386678556 rs1453563182 |
120 | L>F | No |
ClinGen gnomAD |
|
CA6782107 rs769937855 |
123 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA6782108 rs773295040 |
123 | R>W | No |
ClinGen ExAC gnomAD |
|
rs74383362 CA6782105 |
124 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6782104 rs771942558 |
125 | D>Y | No |
ClinGen ExAC gnomAD |
|
rs757271786 CA6782101 |
126 | D>G | No |
ClinGen ExAC gnomAD |
|
CA6782102 rs757271786 |
126 | D>V | No |
ClinGen ExAC gnomAD |
|
rs777488170 CA6782098 |
128 | V>A | No |
ClinGen ExAC gnomAD |
|
CA386678504 rs1442272008 |
129 | T>A | No |
ClinGen TOPMed gnomAD |
|
rs1216776873 CA386678483 |
132 | D>N | No |
ClinGen gnomAD |
|
CA386678480 rs1338019332 |
132 | D>V | No |
ClinGen gnomAD |
|
CA243528361 rs887714461 |
133 | L>P | No |
ClinGen TOPMed |
|
CA6782096 rs752447088 |
134 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1385230262 CA386678459 |
135 | K>N | No |
ClinGen gnomAD |
|
TCGA novel | 136 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6782070 rs778332430 |
139 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM934899 CA243524933 rs896776603 COSM1586168 |
141 | V>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
CA386677222 rs1304619206 |
143 | T>A | No |
ClinGen TOPMed |
|
rs1291579665 CA386677140 |
151 | R>T | No |
ClinGen gnomAD |
|
rs375355584 CA6782062 |
155 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs764306054 CA6782063 |
155 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs774272674 CA6782061 |
159 | A>G | No |
ClinGen ExAC gnomAD |
|
CA243524904 rs774272674 |
159 | A>V | No |
ClinGen ExAC gnomAD |
|
COSM3739420 rs770894894 CA6782060 COSM3739421 |
160 | N>S | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs1225256260 CA386677007 |
161 | F>L | No |
ClinGen gnomAD |
|
CA6782059 rs762956563 |
162 | F>L | No |
ClinGen ExAC gnomAD |
|
CA6782058 rs773246310 |
162 | F>Y | No |
ClinGen ExAC gnomAD |
|
rs1284069277 CA386676982 |
163 | H>R | No |
ClinGen TOPMed |
|
rs1405409408 CA386676966 |
164 | P>L | No |
ClinGen gnomAD |
|
CA6782042 rs753012017 |
167 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6782041 rs767885903 |
171 | L>F | No |
ClinGen ExAC gnomAD |
|
CA6782040 rs762792532 |
174 | A>P | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 175 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6782039 rs773158378 |
176 | K>E | No |
ClinGen ExAC gnomAD |
|
rs191870381 CA6782036 |
187 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1337778632 CA386676695 |
189 | Y>* | No |
ClinGen gnomAD |
|
rs77372858 CA243524748 |
190 | G>* | No |
ClinGen Ensembl |
|
rs768101483 CA6782035 |
194 | G>D | No |
ClinGen ExAC gnomAD |
|
CA386676663 rs1566009543 |
195 | T>A | No |
ClinGen Ensembl |
|
COSM1208209 rs746551713 COSM1208208 CA6782034 |
196 | Q>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs1262048274 CA386676610 |
202 | T>I | No |
ClinGen gnomAD |
|
CA243524722 rs746163344 |
203 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1239061632 CA386676606 |
203 | P>L | No |
ClinGen gnomAD |
|
rs746163344 CA6782031 |
203 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749805369 CA6782028 |
204 | V>A | No |
ClinGen ExAC gnomAD |
|
CA6782029 rs757765366 |
204 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs897575741 CA243524689 |
205 | D>H | No |
ClinGen TOPMed gnomAD |
|
rs1480905732 CA386676562 |
208 | R>S | No |
ClinGen gnomAD |
|
CA386676552 rs1593122950 |
210 | G>R | No |
ClinGen Ensembl |
|
CA243523245 rs994278754 |
212 | H>R | No |
ClinGen Ensembl |
|
TCGA novel | 214 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA386676505 rs1276743549 |
217 | E>K | No |
ClinGen gnomAD |
|
CA6782008 rs756706235 |
217 | E>V | No |
ClinGen ExAC |
|
TCGA novel | 218 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs866450668 CA243523234 |
220 | V>L | No |
ClinGen gnomAD |
|
rs866450668 CA386676487 |
220 | V>M | No |
ClinGen gnomAD |
|
rs1366402644 CA386676483 |
221 | E>K | No |
ClinGen TOPMed |
|
CA6782006 rs781489292 |
223 | Q>* | No |
ClinGen ExAC gnomAD |
|
CA6782005 rs755237336 |
223 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA6782003 rs765051024 |
224 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA6782002 rs199630510 |
227 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA243523209 rs1044680479 |
229 | R>G | No |
ClinGen TOPMed gnomAD |
|
rs763952705 CA6782000 |
231 | A>T | No |
ClinGen ExAC gnomAD |
|
rs1165585974 CA386676411 |
232 | F>L | No |
ClinGen gnomAD |
|
rs774964282 CA6781998 |
233 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA386676338 rs950009801 |
238 | K>E | No |
ClinGen TOPMed gnomAD |
|
CA243523166 rs950009801 |
238 | K>Q | No |
ClinGen TOPMed gnomAD |
|
CA386676332 rs1419528362 |
238 | K>T | No |
ClinGen TOPMed gnomAD |
|
rs1566004811 CA386676320 |
239 | P>S | No |
ClinGen Ensembl |
|
CA243512915 rs543737456 |
240 | D>A | No |
ClinGen gnomAD |
|
CA386674108 rs543737456 |
240 | D>V | No |
ClinGen gnomAD |
|
CA243512907 rs779573904 |
241 | H>Q | No |
ClinGen Ensembl |
|
CA386674095 rs1449440947 |
242 | K>R | No |
ClinGen gnomAD |
|
rs1266212932 CA386674079 |
244 | G>E | No |
ClinGen gnomAD |
|
rs752871684 CA243512902 |
246 | H>L | No |
ClinGen Ensembl |
|
TCGA novel | 249 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA386674042 rs1263335626 |
249 | I>T | No |
ClinGen TOPMed gnomAD |
|
CA6781980 rs767470124 |
250 | P>S | No |
ClinGen ExAC gnomAD |
|
CA6781979 rs758924852 |
251 | Q>E | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 252 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1228218954 CA386673990 |
252 | M>T | No |
ClinGen gnomAD |
|
CA6781978 rs199584208 |
255 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA386673235 rs1359949160 |
256 | S>R | No |
ClinGen TOPMed |
|
rs552138331 CA6781917 |
265 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA386671990 rs1230156194 |
266 | A>P | No |
ClinGen TOPMed |
|
CA386671979 rs1489539713 |
267 | K>N | No |
ClinGen gnomAD |
|
rs1221027433 CA386671954 |
271 | Q>E | No |
ClinGen gnomAD |
|
rs753581718 CA386671951 |
271 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs753581718 CA6781915 |
271 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781899 rs538558561 |
273 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA386671779 rs1404801408 |
274 | S>N | No |
ClinGen TOPMed |
|
rs1365470353 CA386671765 |
275 | N>H | No |
ClinGen TOPMed gnomAD |
|
rs1299440804 CA386671688 |
279 | E>D | No |
ClinGen gnomAD |
|
rs1432465506 CA386671673 |
280 | E>D | No |
ClinGen gnomAD |
|
rs1388281497 CA386671672 |
281 | L>I | No |
ClinGen gnomAD |
|
CA386671650 rs1347089203 |
282 | A>V | No |
ClinGen TOPMed |
|
CA6781897 rs777423599 |
283 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781896 rs17849472 |
285 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs753103354 CA6781895 |
286 | Y>H | No |
ClinGen ExAC gnomAD |
|
rs1454932702 CA386671574 |
287 | D>G | No |
ClinGen TOPMed |
|
rs746588594 CA243508169 |
287 | D>N | No |
ClinGen gnomAD |
|
rs1227142369 CA386671499 |
292 | R>* | No |
ClinGen TOPMed |
|
CA6781893 rs555928070 |
292 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA6781892 rs752105970 |
293 | E>G | No |
ClinGen ExAC gnomAD |
|
rs766903672 CA6781891 |
294 | T>M | No |
ClinGen ExAC gnomAD |
|
rs1308488512 CA386671454 |
295 | D>E | No |
ClinGen TOPMed |
|
TCGA novel | 296 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA386670594 rs1253834507 |
298 | W>* | No |
ClinGen gnomAD |
|
rs909019094 CA243507843 |
301 | T>M | No |
ClinGen gnomAD |
|
rs1048998392 CA243507832 |
303 | N>D | No |
ClinGen Ensembl |
|
CA386670484 rs145311100 |
306 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs145311100 CA6781870 |
306 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs979308007 CA243507781 |
308 | V>L | No |
ClinGen TOPMed gnomAD |
|
rs764433856 CA6781867 |
312 | T>A | No |
ClinGen ExAC gnomAD |
|
rs1352887752 CA386670401 |
312 | T>M | No |
ClinGen gnomAD |
|
CA386670381 rs1391717144 |
314 | V>I | No |
ClinGen gnomAD |
|
rs772757826 CA6781862 |
315 | P>L | No |
ClinGen ExAC gnomAD |
|
CA6781861 rs188922245 |
318 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA6781857 rs747309666 |
320 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs780466528 CA6781856 |
321 | P>S | No |
ClinGen ExAC gnomAD |
|
rs1434459060 CA386670226 |
322 | E>D | No |
ClinGen Ensembl |
|
CA386670152 rs1211193373 |
327 | R>* | No |
ClinGen gnomAD |
|
rs746398874 CA6781854 COSM200841 |
327 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
TCGA novel | 332 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 336 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs9804905 VAR_048324 RCV000957118 CA6781836 |
338 | N>S | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs757786008 CA6781834 |
339 | A>T | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1358646788 CA386669706 |
343 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
TCGA novel | 343 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6781833 rs749372501 |
344 | T>M | No |
ClinGen ExAC gnomAD |
|
rs756385097 CA6781832 |
346 | V>F | No |
ClinGen ExAC gnomAD |
|
rs756385097 CA6781831 |
346 | V>I | No |
ClinGen ExAC gnomAD |
|
CA386669613 rs1315994733 |
347 | I>T | No |
ClinGen TOPMed gnomAD |
|
CA6781828 rs758079908 |
351 | S>N | No |
ClinGen ExAC gnomAD |
|
rs867684641 COSM1586173 CA243506718 COSM934891 |
353 | A>T | endometrium Variant assessed as Somatic; 4.619e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
CA6781826 rs765021664 |
359 | G>D | No |
ClinGen ExAC gnomAD |
|
rs143933367 CA6781825 |
360 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA386669350 rs1246525046 |
362 | L>V | No |
ClinGen gnomAD |
|
rs763631836 CA6781823 |
363 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA6781821 rs775070698 |
364 | G>D | No |
ClinGen ExAC gnomAD |
|
rs1369619593 CA386669328 |
364 | G>S | No |
ClinGen TOPMed |
|
rs1347174960 CA386669292 |
366 | K>R | No |
ClinGen gnomAD |
|
rs895368648 CA243495947 |
368 | N>H | No |
ClinGen Ensembl |
|
rs753731360 CA6781807 |
368 | N>S | No |
ClinGen ExAC gnomAD |
|
CA386666895 rs1252565930 |
370 | E>K | No |
ClinGen gnomAD |
|
rs760116107 CA6781805 |
373 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA386666769 rs1272644460 |
375 | T>A | No |
ClinGen gnomAD |
|
rs1213759192 CA386666760 |
375 | T>S | No |
ClinGen gnomAD |
|
rs372967456 CA6781804 |
377 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA386666671 rs1285764659 CA386666673 |
378 | N>K | No |
ClinGen gnomAD |
|
CA386666633 rs1565955382 |
380 | H>R | No |
ClinGen Ensembl |
|
CA386666636 rs1354798778 |
380 | H>Y | No |
ClinGen gnomAD |
|
rs1264967379 CA386666615 |
381 | S>R | No |
ClinGen TOPMed |
|
CA386666604 rs1565955305 |
382 | V>A | No |
ClinGen Ensembl |
|
CA6781801 rs560157222 |
382 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs560157222 CA243495922 |
382 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
VAR_024368 rs925368 CA6781800 |
387 | N>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA386666501 rs1416353680 |
388 | D>G | No |
ClinGen gnomAD |
|
rs79037701 CA6781798 |
388 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs146182658 CA6781796 |
391 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6781794 COSM1677335 COSM1677334 rs574527062 |
395 | V>M | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs1171487975 CA386666281 |
396 | A>T | No |
ClinGen TOPMed |
|
rs747307889 CA6781793 |
398 | D>G | No |
ClinGen ExAC gnomAD |
|
CA386666190 rs1308377200 |
399 | E>K | No |
ClinGen TOPMed |
|
CA6781790 rs749091409 |
403 | L>S | No |
ClinGen ExAC gnomAD |
|
rs1334067007 CA386666009 |
405 | T>I | No |
ClinGen gnomAD |
|
CA386666018 rs1334067007 |
405 | T>N | No |
ClinGen gnomAD |
|
rs752135586 CA6781787 |
408 | S>N | No |
ClinGen ExAC gnomAD |
|
CA243495869 rs547422898 |
410 | T>K | No |
ClinGen Ensembl |
|
rs1436686739 CA386665885 |
412 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA6781785 rs143551429 |
412 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
TCGA novel | 414 | K>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1353272592 CA386665764 |
415 | S>R | No |
ClinGen TOPMed |
|
CA243494280 rs964363021 |
416 | L>Q | No |
ClinGen Ensembl |
|
CA386665743 rs1209580645 |
419 | D>H | No |
ClinGen gnomAD |
|
rs754154174 CA6781740 |
421 | S>* | No |
ClinGen ExAC gnomAD |
|
CA386665719 rs1369747626 |
422 | D>V | No |
ClinGen TOPMed |
|
rs1224807584 CA386665691 |
427 | V>L | No |
ClinGen gnomAD |
|
rs1307214615 CA386665680 |
428 | Q>H | No |
ClinGen gnomAD |
|
CA6781738 rs34172917 |
430 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs752751962 CA6781737 |
431 | M>V | No |
ClinGen ExAC gnomAD |
|
rs376273833 CA243494240 |
434 | K>R | No |
ClinGen ESP gnomAD |
|
rs868412215 CA243494215 |
436 | A>T | No |
ClinGen gnomAD |
|
rs774510245 CA6781734 |
436 | A>V | No |
ClinGen ExAC gnomAD |
|
rs148329280 CA386665549 |
438 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs148329280 CA6781732 |
438 | V>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA386665535 rs1476128970 |
439 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA6781731 rs776357388 |
440 | S>F | No |
ClinGen ExAC gnomAD |
|
CA386665519 rs1472599133 |
441 | E>* | No |
ClinGen gnomAD |
|
CA386665492 rs1286722287 |
443 | K>E | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 447 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA386665374 rs1592996036 |
450 | V>G | No |
ClinGen Ensembl |
|
rs143307103 CA6781729 |
453 | N>D | No |
ClinGen ESP ExAC gnomAD |
|
rs896422621 CA243494171 |
456 | D>V | No |
ClinGen Ensembl |
|
rs369598585 CA6781728 |
457 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6781726 rs745381147 |
461 | M>L | No |
ClinGen ExAC gnomAD |
|
CA386665260 rs1333335870 |
461 | M>T | No |
ClinGen gnomAD |
|
CA243494159 rs1002187561 |
462 | Q>K | No |
ClinGen TOPMed gnomAD |
|
rs778639793 CA6781725 |
463 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA243491342 rs929589817 |
467 | T>I | No |
ClinGen Ensembl |
|
rs765522763 CA6781693 |
469 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs1394142012 CA386663488 |
470 | S>G | No |
ClinGen gnomAD |
|
rs767544250 CA6781691 COSM275293 |
473 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs767544250 CA6781690 |
473 | S>W | No |
ClinGen ExAC gnomAD |
|
CA386663458 rs1592983119 |
474 | N>T | No |
ClinGen Ensembl |
|
CA6781687 rs770306954 |
479 | A>D | No |
ClinGen ExAC gnomAD |
|
rs753543175 CA6781688 |
479 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 480 | T>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs748850717 CA6781686 |
482 | N>K | No |
ClinGen ExAC gnomAD |
|
CA6781685 rs772681163 |
484 | Y>H | No |
ClinGen ExAC gnomAD |
|
rs1485462505 CA386663374 |
486 | V>G | No |
ClinGen gnomAD |
|
rs769441398 CA6781684 |
489 | G>R | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 490 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA386663348 rs1216566486 COSM3931502 |
491 | E>K | urinary_tract [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA6781683 rs748509869 |
493 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 493 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1268233291 CA386663323 |
494 | D>G | No |
ClinGen gnomAD |
|
TCGA novel | 494 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1356067846 CA386663300 |
497 | N>K | No |
ClinGen gnomAD |
|
CA386663287 rs1304035926 |
499 | S>C | No |
ClinGen TOPMed |
|
CA386663273 rs1395027452 |
501 | L>F | No |
ClinGen TOPMed |
|
rs1314147946 CA386663265 |
502 | K>N | No |
ClinGen gnomAD |
|
COSM216238 CA243491285 rs866015128 |
504 | R>C | pancreas [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA6781681 rs574429341 |
504 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1374335817 CA386663248 |
505 | P>L | No |
ClinGen TOPMed gnomAD |
|
CA386663238 rs1411330651 |
507 | A>V | No |
ClinGen gnomAD |
|
CA6781676 rs149158681 |
508 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs149158681 CA6781677 |
508 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs376799498 CA6781678 |
508 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs757609057 CA6781675 |
509 | G>D | No |
ClinGen ExAC |
|
TCGA novel | 510 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs373898511 CA6781671 |
513 | M>I | No |
ClinGen ESP ExAC gnomAD |
|
rs759433893 CA6781672 |
513 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781673 rs759433893 |
513 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs145219756 CA6781670 |
515 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
CA386663170 rs1206845713 |
518 | T>A | No |
ClinGen TOPMed gnomAD |
|
CA6781667 rs769425001 |
519 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs761503922 CA6781666 |
524 | P>L | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 525 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs185965842 CA6781664 |
527 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA386663086 rs1592982618 |
528 | M>R | No |
ClinGen Ensembl |
|
rs747426594 CA6781663 |
531 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA386663040 rs1178882459 COSM934890 |
531 | A>V | large_intestine Variant assessed as Somatic; impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
rs141445884 CA6781662 |
532 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
COSM3416467 CA386663021 rs772698569 |
533 | R>C | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA6781660 rs745918777 |
533 | R>H | No |
ClinGen ExAC gnomAD |
|
rs772698569 CA6781661 |
533 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781658 rs757519589 |
535 | E>A | No |
ClinGen ExAC gnomAD |
|
CA386663003 rs1328591514 |
535 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA386662976 rs1397164295 |
536 | E>D | No |
ClinGen gnomAD |
|
rs1049248637 CA243491178 |
536 | E>K | No |
ClinGen Ensembl |
|
rs1408750982 CA386662902 |
541 | L>R | No |
ClinGen gnomAD |
|
CA6781655 rs754671426 |
542 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs767458730 CA243491155 |
543 | P>L | No |
ClinGen Ensembl |
|
CA243491127 rs912237725 |
545 | P>R | No |
ClinGen Ensembl |
|
rs369776805 CA6781654 |
545 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA243491119 rs953837964 |
546 | A>T | No |
ClinGen TOPMed |
|
CA6781652 rs144433286 |
546 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA243489745 rs372157894 |
548 | I>V | No |
ClinGen ESP gnomAD |
|
CA243489738 CA386662658 rs139549885 |
549 | G>R | No |
ClinGen ESP TOPMed gnomAD |
|
rs11068997 CA6781633 VAR_048325 |
552 | A>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA386662576 rs1301665061 |
553 | L>F | No |
ClinGen gnomAD |
|
CA243489714 rs765184633 |
553 | L>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781631 rs765184633 |
553 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781630 rs756703594 |
556 | S>F | No |
ClinGen ExAC gnomAD |
|
rs1291086423 CA386662505 |
557 | S>F | No |
ClinGen gnomAD |
|
rs1426766005 CA386662462 |
559 | S>F | No |
ClinGen gnomAD |
|
rs1344635119 CA386662447 |
560 | L>P | No |
ClinGen TOPMed gnomAD |
|
rs775600396 CA243489697 |
560 | L>V | No |
ClinGen Ensembl |
|
CA6781628 rs763719701 |
561 | P>S | No |
ClinGen ExAC gnomAD |
|
CA386662399 rs1393572047 |
562 | S>F | No |
ClinGen gnomAD |
|
CA6781626 rs775685023 |
563 | F>S | No |
ClinGen ExAC gnomAD |
|
rs911789972 COSM223590 CA243489681 |
564 | P>L | skin [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
TCGA novel | 565 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA386662315 rs1484868302 |
566 | T>I | No |
ClinGen TOPMed gnomAD |
|
CA6781624 rs759839584 |
567 | L>P | No |
ClinGen ExAC gnomAD |
|
rs773484065 CA6781621 |
568 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781623 rs148427492 |
568 | S>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs148427492 CA6781622 |
568 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
COSM1470504 rs773484065 CA6781620 |
568 | S>Y | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs1270487375 CA386662265 |
569 | W>C | No |
ClinGen TOPMed |
|
CA386662289 rs1308406773 |
569 | W>R | No |
ClinGen gnomAD |
|
CA6781619 rs370041129 |
570 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs370041129 CA386662255 |
570 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 571 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6781617 rs201858644 |
573 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA6781615 rs745681173 |
574 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs758166063 CA6781616 |
574 | S>T | No |
ClinGen ExAC gnomAD |
|
CA6781614 rs778758972 COSM934889 |
575 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs375778147 CA6781612 |
576 | R>* | No |
ClinGen ESP ExAC gnomAD |
|
rs763696895 CA6781611 COSM1358664 |
576 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA386660317 rs1252296482 |
578 | A>T | No |
ClinGen gnomAD |
|
CA6781600 rs748201825 |
579 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 582 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs768769762 CA6781598 |
582 | E>K | No |
ClinGen ExAC gnomAD |
|
CA386660138 rs1333403159 |
586 | S>G | No |
ClinGen gnomAD |
|
TCGA novel | 588 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1264910983 CA386660074 |
589 | E>A | No |
ClinGen TOPMed gnomAD |
|
CA6781597 rs541055586 |
589 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs943706257 CA243484889 |
590 | S>G | No |
ClinGen TOPMed |
|
CA6781594 rs749181313 |
593 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781595 rs749181313 |
593 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs755591689 CA6781592 |
594 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781591 rs752151953 |
595 | T>S | No |
ClinGen ExAC gnomAD |
|
rs1392282950 CA386659825 |
598 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs751951114 CA6781588 |
599 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781587 rs766891781 |
600 | E>D | No |
ClinGen ExAC gnomAD |
|
rs1438716968 CA386659712 |
601 | P>L | No |
ClinGen gnomAD |
|
rs147093442 CA6781586 |
601 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA6781585 rs199600983 |
602 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1565934993 CA386659666 |
604 | M>V | No |
ClinGen Ensembl |
|
TCGA novel | 605 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA386659423 rs1328174827 |
607 | S>R | No |
ClinGen gnomAD |
|
rs753919574 CA6781565 |
608 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA243484181 rs757176450 |
611 | R>Q | No |
ClinGen TOPMed |
|
CA6781564 rs764114845 |
611 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs767383918 CA6781562 |
614 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs767383918 CA6781561 |
614 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781560 rs369214509 |
617 | W>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs146186322 CA6781559 |
618 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1014085647 CA243484145 |
619 | G>R | No |
ClinGen Ensembl |
|
rs769749273 CA6781558 |
620 | D>N | No |
ClinGen ExAC gnomAD |
|
CA386659201 rs1371909907 |
621 | G>V | No |
ClinGen gnomAD |
|
CA386659188 rs1592948533 |
623 | V>G | No |
ClinGen Ensembl |
|
CA386659177 rs1301129051 |
625 | D>A | No |
ClinGen TOPMed |
|
CA386659175 rs1301129051 |
625 | D>V | No |
ClinGen TOPMed |
|
rs375151526 CA6781555 |
626 | T>I | No |
ClinGen ESP ExAC gnomAD |
|
rs1057334750 CA243484122 |
629 | P>S | No |
ClinGen TOPMed |
|
rs202120742 CA6781554 |
631 | V>L | No |
ClinGen ExAC gnomAD |
|
CA386659140 rs202120742 |
631 | V>M | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 635 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA386659111 rs1198656522 |
635 | P>R | No |
ClinGen Ensembl |
|
rs1592948401 CA386659114 |
635 | P>S | No |
ClinGen Ensembl |
|
rs1341377436 CA386659106 |
636 | T>N | No |
ClinGen gnomAD |
|
CA386659103 rs1565933571 |
637 | L>F | No |
ClinGen Ensembl |
|
rs746234453 CA6781551 |
638 | P>S | No |
ClinGen ExAC gnomAD |
|
CA6781550 rs373438493 |
640 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1565933454 CA386659076 |
641 | E>G | No |
ClinGen Ensembl |
|
CA6781548 rs754246516 |
641 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 642 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA386658966 rs1411946171 |
651 | T>S | No |
ClinGen gnomAD |
|
rs1398562076 CA386658953 |
652 | K>E | No |
ClinGen gnomAD |
|
rs940809453 CA243484060 |
656 | E>G | No |
ClinGen Ensembl |
|
CA243484050 rs978118318 |
658 | L>V | No |
ClinGen TOPMed |
|
rs752839958 CA6781545 |
666 | H>R | No |
ClinGen ExAC gnomAD |
|
CA386658664 rs1387294351 |
668 | S>G | No |
ClinGen gnomAD |
|
rs751683768 CA6781525 |
671 | P>A | No |
ClinGen ExAC gnomAD |
|
rs751683768 CA6781527 |
671 | P>S | No |
ClinGen ExAC gnomAD |
|
rs751683768 CA6781526 |
671 | P>T | No |
ClinGen ExAC gnomAD |
|
rs867608861 CA243480593 |
675 | R>K | No |
ClinGen Ensembl |
|
rs1444912928 CA386657352 |
676 | I>M | No |
ClinGen gnomAD |
|
rs766639068 CA6781524 |
677 | H>Y | No |
ClinGen ExAC gnomAD |
|
rs146384144 COSM200839 CA6781522 |
678 | V>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
rs1248326973 CA386657318 |
679 | A>D | No |
ClinGen gnomAD |
|
rs1219287655 CA386657292 |
681 | T>I | No |
ClinGen gnomAD |
|
CA386657251 rs1393052706 |
684 | A>T | No |
ClinGen TOPMed |
|
rs1450497747 CA386657241 |
685 | A>T | No |
ClinGen gnomAD |
|
rs1592932237 CA386657188 |
689 | K>Q | No |
ClinGen Ensembl |
|
CA386657073 rs1296385624 |
692 | K>T | No |
ClinGen gnomAD |
|
rs770255193 CA6781511 |
695 | M>I | No |
ClinGen ExAC gnomAD |
|
CA386657030 rs1189344671 |
695 | M>T | No |
ClinGen TOPMed gnomAD |
|
rs1427045307 CA386657036 |
695 | M>V | No |
ClinGen gnomAD |
|
CA6781510 rs748614133 |
697 | R>T | No |
ClinGen ExAC gnomAD |
|
CA243479946 rs752551743 |
698 | T>I | No |
ClinGen gnomAD |
|
CA386656968 rs1416804609 |
700 | L>F | No |
ClinGen TOPMed |
|
CA6781506 rs780137647 |
701 | R>G | No |
ClinGen ExAC gnomAD |
|
COSM1358662 CA6781504 rs753666949 |
701 | R>H | Variant assessed as Somatic; 5.298e-05 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA6781505 rs753666949 |
701 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1219135109 CA386656923 |
703 | L>R | No |
ClinGen gnomAD |
|
CA386656919 rs1363321396 |
704 | T>A | No |
ClinGen gnomAD |
|
rs907384183 CA243479875 |
704 | T>M | No |
ClinGen TOPMed gnomAD |
|
CA6781502 rs186643308 |
706 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed |
|
CA243479857 rs1012001100 |
708 | Y>D | No |
ClinGen gnomAD |
|
rs1359925632 CA386656858 |
709 | R>G | No |
ClinGen TOPMed |
|
CA6781501 rs752619910 |
709 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs894926967 CA243479838 |
711 | Q>L | No |
ClinGen Ensembl |
|
CA386656814 rs1413833211 |
714 | C>Y | No |
ClinGen gnomAD |
|
rs758962325 CA6781499 |
715 | K>M | No |
ClinGen ExAC gnomAD |
|
rs1470578347 CA386656810 |
715 | K>Q | No |
ClinGen gnomAD |
|
TCGA novel | 716 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs770460324 CA6781497 |
717 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6781496 rs762643976 |
720 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs772872967 CA6781495 |
721 | D>N | No |
ClinGen ExAC gnomAD |
|
rs1484058233 CA386656764 |
722 | P>S | No |
ClinGen gnomAD |
|
CA6781493 rs748515904 |
723 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs781492736 CA6781492 |
724 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA386656745 rs1260474911 |
725 | P>L | No |
ClinGen gnomAD |
|
rs201742073 CA6781490 |
728 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs780219011 CA6781489 |
729 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs758667543 CA6781488 |
732 | T>M | No |
ClinGen ExAC gnomAD |
|
CA386656684 rs1354903922 |
735 | V>F | No |
ClinGen TOPMed gnomAD |
|
CA386656686 rs1354903922 |
735 | V>I | No |
ClinGen TOPMed gnomAD |
|
rs1172685612 CA386656670 |
737 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs779285843 CA6781486 |
738 | C>Y | No |
ClinGen ExAC gnomAD |
|
rs755918306 CA6781485 |
739 | A>T | No |
ClinGen ExAC gnomAD |
|
CA386656655 rs1165064238 |
739 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
TCGA novel | 741 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA6781481 rs751012181 |
743 | A>T | No |
ClinGen ExAC gnomAD |
|
CA6781480 rs765864824 |
745 | A>S | No |
ClinGen ExAC gnomAD |
|
rs772784664 CA6781478 |
746 | A>S | No |
ClinGen ExAC gnomAD |
|
CA6781477 rs769449306 |
752 | I>T | No |
ClinGen ExAC gnomAD |
|
CA6781476 rs762150377 |
754 | T>I | No |
ClinGen ExAC TOPMed |
|
rs1247152700 CA386656556 |
755 | K>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs1290466215 CA386656545 |
756 | E>G | No |
ClinGen TOPMed |
|
rs1320012830 CA386656534 |
757 | N>K | No |
ClinGen gnomAD |
|
TCGA novel | 758 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA243479659 rs557013337 |
758 | N>K | No |
ClinGen Ensembl |
|
rs776196849 | 759 | N>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
No associated diseases with Q14161
6 regional properties for Q14161
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | Arf GTPase activating protein | 1 - 124 | IPR001164 |
repeat | Ankyrin repeat | 132 - 228 | IPR002110 |
domain | GIT, Spa2 homology (SHD) domain | 266 - 296 | IPR013724-1 |
domain | GIT, Spa2 homology (SHD) domain | 330 - 360 | IPR013724-2 |
domain | ARF GTPase-activating protein GIT1, C-terminal | 641 - 753 | IPR022018 |
domain | Arf GTPase-activating protein GIT1/2, coiled-coil domain | 414 - 478 | IPR032352 |
4 GO annotations of cellular component
Name | Definition |
---|---|
focal adhesion | A cell-substrate junction that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments. In insects focal adhesion has also been referred to as hemi-adherens junction (HAJ). |
nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
presynapse | The part of a synapse that is part of the presynaptic cell. |
synapse | The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane. |
3 GO annotations of molecular function
Name | Definition |
---|---|
GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
metal ion binding | Binding to a metal ion. |
small GTPase binding | Binding to a small monomeric GTPase. |
4 GO annotations of biological process
Name | Definition |
---|---|
brain development | The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.). |
regulation of ARF protein signal transduction | Any process that modulates the frequency, rate or extent of ARF protein signal transduction. |
regulation of G protein-coupled receptor signaling pathway | Any process that modulates the frequency, rate or extent of G protein-coupled receptor signaling pathway. |
synaptic vesicle recycling | The trafficking of synaptic vesicles from the pre-synaptic membrane so the vesicle can dock and prime for another round of exocytosis and neurotransmitter release. Recycling occurs after synaptic vesicle exocytosis, and is necessary to replenish presynaptic vesicle pools, sustain transmitter release and preserve the structural integrity of the presynaptic membrane. Recycling can occur following transient fusion with the presynaptic membrane (kiss and run), or via endocytosis of presynaptic membrane. |
7 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q9DG15 | p95-APP1 | Gallus gallus (Chicken) | EV | |
Q95RG8 | Git | ARF GTPase-activating protein Git | Drosophila melanogaster (Fruit fly) | SS |
Q9Y2X7 | GIT1 | ARF GTPase-activating protein GIT1 | Homo sapiens (Human) | SS |
Q68FF6 | Git1 | ARF GTPase-activating protein GIT1 | Mus musculus (Mouse) | SS |
Q9JLQ2 | Git2 | ARF GTPase-activating protein GIT2 | Mus musculus (Mouse) | SS |
Q9Z272 | Git1 | ARF GTPase-activating protein GIT1 | Rattus norvegicus (Rat) | SS |
Q66H91 | Git2 | ARF GTPase-activating protein GIT2 | Rattus norvegicus (Rat) | SS |
10 | 20 | 30 | 40 | 50 | 60 |
MSKRLRSSEV | CADCSGPDPS | WASVNRGTFL | CDECCSVHRS | LGRHISQVRH | LKHTPWPPTL |
70 | 80 | 90 | 100 | 110 | 120 |
LQMVETLYNN | GANSIWEHSL | LDPASIMSGR | RKANPQDKVH | PNKAEFIRAK | YQMLAFVHRL |
130 | 140 | 150 | 160 | 170 | 180 |
PCRDDDSVTA | KDLSKQLHSS | VRTGNLETCL | RLLSLGAQAN | FFHPEKGNTP | LHVASKAGQI |
190 | 200 | 210 | 220 | 230 | 240 |
LQAELLAVYG | ADPGTQDSSG | KTPVDYARQG | GHHELAERLV | EIQYELTDRL | AFYLCGRKPD |
250 | 260 | 270 | 280 | 290 | 300 |
HKNGQHFIIP | QMADSSLDLS | ELAKAAKKKL | QSLSNHLFEE | LAMDVYDEVD | RRETDAVWLA |
310 | 320 | 330 | 340 | 350 | 360 |
TQNHSALVTE | TTVVPFLPVN | PEYSSTRNQG | RQKLARFNAH | EFATLVIDIL | SDAKRRQQGS |
370 | 380 | 390 | 400 | 410 | 420 |
SLSGSKDNVE | LILKTINNQH | SVESQDNDQP | DYDSVASDED | TDLETTASKT | NRQKSLDSDL |
430 | 440 | 450 | 460 | 470 | 480 |
SDGPVTVQEF | MEVKNALVAS | EAKIQQLMKV | NNNLSDELRI | MQKKLQTLQS | ENSNLRKQAT |
490 | 500 | 510 | 520 | 530 | 540 |
TNVYQVQTGS | EYTDTSNHSS | LKRRPSARGS | RPMSMYETGS | GQKPYLPMGE | ASRPEESRMR |
550 | 560 | 570 | 580 | 590 | 600 |
LQPFPAHIGR | SALVTSSSSL | PSFPSTLSWS | RDESARRASR | LEKQNSTPES | DYDNTPNDME |
610 | 620 | 630 | 640 | 650 | 660 |
PDGMGSSRKG | RQRSMVWPGD | GLVPDTAEPH | VAPSPTLPST | EDVIRKTEQI | TKNIQELLRA |
670 | 680 | 690 | 700 | 710 | 720 |
AQENKHDSYI | PCSERIHVAV | TEMAALFPKK | PKSDMVRTSL | RLLTSSAYRL | QSECKKTLPG |
730 | 740 | 750 | |||
DPGSPTDVQL | VTQQVIQCAY | DIAKAAKQLV | TITTKENNN |