Q13586
Gene name |
STIM1 (GOK) |
Protein name |
Stromal interaction molecule 1 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:6786 |
EC number |
|
Protein Class |
STROMAL INTERACTION MOLECULE HOMOLOG (PTHR15136) |

Descriptions
Stromal interaction molecules (STIMs) function as endoplasmic reticulum calcium (Ca2+) sensors that differentially regulate plasma membrane Ca2+ release activated Ca2+ channels in various cells. STIM1 stimulates calcium ion (Ca2+) entry through plasma membrane Orai1 channels in response to decreased Ca2+ concentrations in the endoplasmic reticulum lumen, and STIM1 and Orai1 are important for T cell activation, platelet aggregation and skeletal muscle development.
The N-terminal luminal segment of STIM1 contains EF-hand and SAM (sterile α motif) domain and the C-terminal segment contains two putative coiled-coil domains (CC1 and CC2), as well as several acidic, serine-proline-rich, and basic segments. An acidic motif within the coiled-coil region keeps STIM1 inactive via an intramolecular interaction with a basic sequence within the Orai1 activating domain (SOAR) that has been identified as key for Orai1 activation. The oligomerization of STIM1 unmasks the SOAR domain by breaking the intramolecular interaction that keeps it inactive in the quiescent STIM1 molecule.
Furthermore, it has been reported that stabilizing EF-SAM domains within full-length STIM1 inhibit Ca2+ release-activated Ca2+ (CRAC) entry. The EF-hand together with the SAM domains (i.e., EF-SAM)s in the luminal region of all STIMs are responsible for Ca2+ sensing and initiating the molecular reorganization at ER-PM junctions responsible for store-operated Ca2+ entry.
Autoinhibitory domains (AIDs)
Target domain |
341-441 (SOAR domain) |
Relief mechanism |
Others |
Assay |
Mutagenesis experiment, Structural analysis |
Target domain |
341-441 (SOAR domain) |
Relief mechanism |
Partner binding |
Assay |
Deletion assay |
Accessory elements
No accessory elements
References
- Zheng L et al. (2011) "Auto-inhibitory role of the EF-SAM domain of STIM proteins in store-operated calcium entry", Proceedings of the National Academy of Sciences of the United States of America, 108, 1337-42
- Korzeniowski MK et al. (2010) "Activation of STIM1-Orai1 involves an intramolecular switching mechanism", Science signaling, 3, ra82
- Stathopulos PB et al. (2008) "Structural and mechanistic insights into STIM1-mediated initiation of store-operated calcium entry", Cell, 135, 110-22
Autoinhibited structure
Activated structure

483 variants for Q13586
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
RCV001865414 CA16609753 RCV000455399 rs1060499904 |
3 | V>I | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA5830119 RCV001198486 rs200907515 RCV001863128 |
36 | S>L | Stormorken syndrome Combined immunodeficiency due to STIM1 deficiency [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000689185 CA5830149 rs201245746 |
50 | R>Q | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000034368 rs397515436 VAR_069892 CA130871 |
72 | H>Q | TAM1; myoblasts with the mutation have significantly increased clustering of STIM1, regardless of calcium levels, indicating that calcium sensing in the sarcoplasmic reticulum is impaired Myopathy, tubular aggregate, 1 [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
CA16044284 rs1057519506 RCV000416560 |
74 | L>P | Combined immunodeficiency due to STIM1 deficiency [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV000169764 CA199255 rs748277951 VAR_075619 |
80 | N>T | TAM1; myoblasts with the mutation have significantly increased clustering of STIM1, regardless of calcium levels, indicating that calcium sensing in the sarcoplasmic reticulum is impaired Myopathy, tubular aggregate, 1 [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
RCV000034365 VAR_069893 CA130862 rs397514675 |
84 | D>G | TAM1; myoblasts with the mutation have significantly increased clustering of STIM1, regardless of calcium levels, indicating that calcium sensing in the sarcoplasmic reticulum is impaired Myopathy, tubular aggregate, 1 [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV000034366 rs397514676 VAR_069894 CA130865 |
109 | H>N | TAM1; myoblasts with the mutation have significantly increased clustering of STIM1, regardless of calcium levels, indicating that calcium sensing in the sarcoplasmic reticulum is impaired Myopathy, tubular aggregate, 1 [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
RCV000034367 CA130868 rs397514677 VAR_069895 |
109 | H>R | TAM1; myoblasts with the mutation have significantly increased clustering of STIM1, regardless of calcium levels, indicating that calcium sensing in the sarcoplasmic reticulum is impaired Myopathy, tubular aggregate, 1 [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
CA170740 RCV000132725 RCV000169763 RCV000537798 rs527236030 VAR_074037 RCV000144069 |
115 | I>F | Myopathy, tubular aggregate, 1 Stormorken syndrome STRMK and TAM1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV000004976 rs397515357 |
128 | E>missing | Combined immunodeficiency due to STIM1 deficiency [ClinVar] | Yes |
ClinVar dbSNP |
RCV000690569 rs143916878 CA5830222 |
152 | E>K | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV000526622 CA5830223 rs144602692 |
153 | T>I | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA5830228 rs199893056 RCV000658582 RCV000541355 |
163 | A>D | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001871615 RCV001280694 rs201523207 CA5830348 |
291 | N>D | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA163350 VAR_071476 rs483352867 |
304 | R>W | STRMK; autosomal dominant; promotes constitutive activation of the Ca(2+) release-activated Ca(2+) (CRAC) channel [UniProt] | Yes |
ClinGen UniProt Ensembl dbSNP |
CA16044283 rs1057519505 RCV000416561 VAR_071477 |
426 | R>C | Combined immunodeficiency due to STIM1 deficiency probable disease-associated variant found in a patient with autosomal recessive hypomaturation enamel malformations, nail dysplasia and frequent throat infections [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
VAR_069896 rs397514671 CA130849 RCV000034350 |
429 | R>C | IMD10 Combined immunodeficiency due to STIM1 deficiency [UniProt, ClinVar] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
RCV000636928 CA379194345 rs1444907403 |
461 | M>T | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV000693508 rs1565171115 |
484 | I>missing | Stormorken syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA379195301 rs1554971682 RCV000626792 |
512 | S>T | Migraine [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA5830589 RCV000626054 rs142239530 RCV000532168 |
530 | R>C | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
CA5830590 RCV000690054 rs746517083 |
530 | R>H | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA379196725 RCV000687223 rs1382628661 |
534 | A>V | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV000248185 CA5830594 rs35960304 VAR_061878 RCV000546882 |
538 | P>S | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV000814725 rs1390592487 CA379196761 |
540 | M>T | Myopathy, tubular aggregate, 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
CA5830596 rs370846246 RCV000636929 |
542 | R>C | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000686846 RCV000522728 CA5830608 rs747547917 |
558 | R>W | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA379197209 RCV000804048 rs1590703419 |
582 | A>V | Myopathy, tubular aggregate, 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV000688407 CA5830620 rs750326949 |
585 | A>V | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA379197283 rs1176059435 RCV000530795 |
588 | H>R | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
CA5830638 rs35637264 RCV000560244 |
613 | S>Y | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA5830641 rs145197758 COSM268094 RCV000548778 |
615 | R>H | Stormorken syndrome large_intestine [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000824146 CA5830646 rs369549218 |
632 | D>N | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
CA5830652 RCV000534008 RCV000248465 rs140080199 |
643 | R>H | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA379197984 RCV001281024 rs1164327463 |
645 | P>A | Myopathy, tubular aggregate, 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs201992816 RCV000688151 CA216534273 |
652 | A>S | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs201466902 CA5830655 RCV000636926 |
654 | A>T | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV000700042 CA5830670 rs779204802 |
671 | R>Q | Stormorken syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs752778021 CA5830103 |
4 | C>W | No |
ClinGen ExAC gnomAD |
|
CA5830104 rs150529970 |
5 | V>F | No |
ClinGen ESP ExAC gnomAD |
|
rs150529970 CA5830105 |
5 | V>I | No |
ClinGen ESP ExAC gnomAD |
|
CA5830106 rs751520286 |
8 | A>T | No |
ClinGen ExAC gnomAD |
|
CA5830107 rs757177992 |
11 | L>F | No |
ClinGen ExAC gnomAD |
|
rs1182720746 CA379196334 |
12 | L>P | No |
ClinGen gnomAD |
|
CA379196337 rs1590493888 |
13 | W>R | No |
ClinGen Ensembl |
|
CA216520765 rs1030838394 |
17 | L>M | No |
ClinGen Ensembl |
|
CA379196381 rs1554949765 |
19 | Q>H | No |
ClinGen Ensembl |
|
rs750103201 CA5830109 |
21 | Q>K | No |
ClinGen ExAC gnomAD |
|
CA5830110 rs201500852 |
21 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA379196396 rs1395814191 |
22 | S>G | No |
ClinGen gnomAD |
|
rs1403143326 CA379196403 |
23 | L>I | No |
ClinGen TOPMed |
|
CA379196415 rs1364406327 |
24 | S>R | No |
ClinGen TOPMed |
|
CA379196420 rs748791339 |
25 | H>P | No |
ClinGen ExAC gnomAD |
|
CA5830112 rs748791339 |
25 | H>R | No |
ClinGen ExAC gnomAD |
|
CA379196438 rs1393963653 |
27 | H>Q | No |
ClinGen gnomAD |
|
rs1164201423 CA379196457 |
30 | K>E | No |
ClinGen TOPMed |
|
CA379196467 rs778297119 |
31 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs368091975 CA5830113 |
31 | A>P | No |
ClinGen ESP ExAC gnomAD |
|
rs778297119 CA5830114 |
31 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs771348972 CA5830116 |
34 | T>N | No |
ClinGen ExAC gnomAD |
|
CA379196482 rs1565091023 |
34 | T>S | No |
ClinGen Ensembl |
|
CA5830121 rs201156770 |
37 | G>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs774499633 CA216520781 |
38 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs774499633 COSM687385 CA5830123 |
38 | A>T | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs1187280735 CA379196521 |
41 | E>K | No |
ClinGen gnomAD |
|
CA216520785 rs947448351 |
43 | S>P | No |
ClinGen Ensembl |
|
rs750192887 CA5830126 |
44 | T>S | No |
ClinGen ExAC gnomAD |
|
CA5830148 rs753590717 |
47 | E>G | No |
ClinGen ExAC gnomAD |
|
rs1590608659 CA379484845 |
49 | C>Y | No |
ClinGen Ensembl |
|
CA5830150 rs764752031 |
54 | P>T | No |
ClinGen ExAC gnomAD |
|
rs879513916 CA216282956 |
56 | C>Y | No |
ClinGen Ensembl |
|
rs1233864830 CA379484910 |
59 | E>K | No |
ClinGen TOPMed gnomAD |
|
CA5830152 rs202160755 |
61 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA379484939 rs1254195478 |
62 | K>N | No |
ClinGen TOPMed |
|
CA5830154 rs199799231 |
66 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1317286420 CA379484972 |
67 | A>P | No |
ClinGen TOPMed |
|
rs201061396 CA5830156 |
69 | R>C | No |
ClinGen ExAC gnomAD |
|
rs376734394 CA216283055 |
69 | R>H | No |
ClinGen ESP gnomAD |
|
rs768950124 CA5830158 |
77 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA379485041 rs1431700656 |
77 | D>V | No |
ClinGen Ensembl |
|
CA216283100 rs1029278195 |
80 | N>D | No |
ClinGen TOPMed |
|
CA5830160 rs748277951 |
80 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA379485071 rs1156301676 |
82 | D>H | No |
ClinGen gnomAD |
|
CA379485070 rs1156301676 |
82 | D>Y | No |
ClinGen gnomAD |
|
CA379485079 rs1344608162 |
83 | V>L | No |
ClinGen gnomAD |
|
CA5830162 rs773255654 |
89 | D>A | No |
ClinGen ExAC gnomAD |
|
CA216283124 rs954648171 |
90 | E>D | No |
ClinGen gnomAD |
|
CA379485208 rs1440304974 |
99 | H>D | No |
ClinGen gnomAD |
|
rs1440304974 CA379485209 |
99 | H>Y | No |
ClinGen gnomAD |
|
rs200658405 CA5830177 |
100 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1334756437 CA379485261 |
106 | S>N | No |
ClinGen TOPMed gnomAD |
|
CA379485267 rs1478850790 |
107 | T>N | No |
ClinGen TOPMed |
|
rs397514676 CA379485279 |
109 | H>Y | No |
ClinGen gnomAD |
|
CA379485292 rs1371282532 |
111 | E>K | No |
ClinGen TOPMed |
|
rs201767533 CA216321890 |
114 | L>F | No |
ClinGen TOPMed gnomAD |
|
CA5830184 rs759378488 |
117 | V>L | No |
ClinGen ExAC gnomAD |
|
CA5830183 rs759378488 |
117 | V>M | No |
ClinGen ExAC gnomAD |
|
CA5830185 rs775191009 |
127 | S>P | No |
ClinGen ExAC gnomAD |
|
CA5830186 rs762526578 |
129 | V>L | No |
ClinGen ExAC gnomAD |
|
rs1565162073 CA379485436 |
130 | Y>H | No |
ClinGen Ensembl |
|
CA5830213 rs201274425 |
131 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1192022164 CA379485451 |
132 | W>R | No |
ClinGen gnomAD |
|
rs758479123 CA216348238 |
133 | T>A | No |
ClinGen Ensembl |
|
rs1590678408 CA379485463 |
133 | T>I | No |
ClinGen Ensembl |
|
CA5830216 rs200351944 |
134 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1174379175 CA379485469 |
135 | D>N | No |
ClinGen gnomAD |
|
CA5830217 rs200648767 |
136 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs200648767 CA5830218 |
136 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1590678420 CA379485477 |
136 | E>K | No |
ClinGen Ensembl |
|
CA5830219 rs199728303 |
138 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1391325344 CA379485496 |
139 | Q>* | No |
ClinGen gnomAD |
|
rs963476096 CA216348256 |
139 | Q>R | No |
ClinGen TOPMed |
|
rs74966469 CA379485516 |
142 | I>L | No |
ClinGen gnomAD |
|
rs74966469 CA216348271 |
142 | I>V | No |
ClinGen gnomAD |
|
rs200824556 CA216348276 |
143 | T>A | No |
ClinGen TOPMed |
|
CA379485531 rs1384633809 |
144 | Y>C | No |
ClinGen TOPMed |
|
CA379485539 rs1590678454 |
145 | V>G | No |
ClinGen Ensembl |
|
rs201671402 CA216348292 |
148 | P>L | No |
ClinGen Ensembl |
|
CA379485561 rs1590678476 |
149 | Q>P | No |
ClinGen Ensembl |
|
rs1590678489 CA379485591 |
153 | T>P | No |
ClinGen Ensembl |
|
CA5830225 rs771484089 |
155 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs771484089 CA5830226 |
155 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs747832260 CA5830224 |
155 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs899854132 CA216348320 |
158 | Q>P | No |
ClinGen Ensembl |
|
rs200734570 CA216348327 |
159 | L>V | No |
ClinGen Ensembl |
|
rs1201201885 CA379485630 |
160 | S>G | No |
ClinGen gnomAD |
|
CA379485639 rs1362156104 |
161 | G>S | No |
ClinGen gnomAD |
|
rs776121110 CA379485657 |
164 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830229 rs776121110 |
164 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1460256142 CA379485668 |
165 | P>L | No |
ClinGen gnomAD |
|
CA5830230 rs763289208 |
166 | R>K | No |
ClinGen ExAC gnomAD |
|
CA5830246 rs776209475 |
166 | R>S | No |
ClinGen ExAC gnomAD |
|
CA216351277 rs200912784 |
172 | T>I | No |
ClinGen Ensembl |
|
CA379485726 rs1322146300 |
173 | T>N | No |
ClinGen gnomAD |
|
CA5830249 rs774729638 |
175 | T>A | No |
ClinGen ExAC gnomAD |
|
CA379485746 rs1338973695 |
176 | G>E | No |
ClinGen gnomAD |
|
CA5830250 rs761973338 |
177 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA379485756 rs1351131329 |
178 | V>L | No |
ClinGen TOPMed |
|
rs1157495973 CA379485783 |
182 | T>A | No |
ClinGen TOPMed |
|
CA5830252 rs750619379 |
182 | T>I | No |
ClinGen ExAC gnomAD |
|
CA5830254 rs766441391 |
184 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs368391164 CA5830253 |
184 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1180877917 CA379485815 |
187 | R>W | No |
ClinGen TOPMed |
|
rs372235564 CA5830255 |
188 | Q>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA379485862 rs1371053190 |
194 | A>S | No |
ClinGen gnomAD |
|
rs367888213 CA5830257 |
197 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA379485882 rs1371903072 |
197 | T>I | No |
ClinGen gnomAD |
|
CA5830258 rs752494097 |
198 | V>M | No |
ClinGen ExAC gnomAD |
|
rs1379785106 CA379485890 |
199 | L>I | No |
ClinGen gnomAD |
|
rs1242032695 CA379485913 |
202 | P>L | No |
ClinGen TOPMed |
|
CA5830262 rs770569856 |
202 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA379485922 rs1375399301 |
204 | L>F | No |
ClinGen Ensembl |
|
rs745319940 CA216358607 |
207 | R>H | No |
ClinGen ExAC gnomAD |
|
CA5830277 rs745319940 |
207 | R>L | No |
ClinGen ExAC gnomAD |
|
CA5830279 rs763916693 |
209 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs199743104 CA379485985 |
210 | H>Q | No |
ClinGen ExAC gnomAD |
|
rs201579576 CA216358615 |
210 | H>R | No |
ClinGen gnomAD |
|
rs756925085 CA5830281 |
212 | K>R | No |
ClinGen ExAC gnomAD |
|
rs1418384472 CA379486014 |
214 | F>L | No |
ClinGen TOPMed |
|
CA379486052 rs1411124220 |
220 | I>S | No |
ClinGen gnomAD |
|
CA5830286 rs186158674 |
221 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA5830288 rs772427441 |
222 | I>T | No |
ClinGen ExAC gnomAD |
|
CA379486071 rs1159817252 |
224 | V>M | No |
ClinGen TOPMed |
|
CA5830290 rs747254186 |
225 | G>C | No |
ClinGen ExAC gnomAD |
|
CA5830292 rs776685559 |
226 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs765230033 CA379486122 |
231 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs765230033 CA5830294 |
231 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs565898232 CA216358685 |
234 | N>T | No |
ClinGen 1000Genomes TOPMed |
|
CA5830296 rs770272305 |
235 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770272305 CA379486148 |
235 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830297 rs764002968 |
235 | R>H | No |
ClinGen ExAC gnomAD |
|
rs751364519 CA5830298 |
237 | S>F | No |
ClinGen ExAC gnomAD |
|
rs767252215 CA5830300 |
240 | H>R | No |
ClinGen ExAC gnomAD |
|
rs757090235 CA5830299 |
240 | H>Y | No |
ClinGen ExAC gnomAD |
|
CA216525103 rs1057013806 |
241 | M>T | No |
ClinGen Ensembl |
|
rs1166777308 CA379188927 |
243 | K>M | No |
ClinGen TOPMed gnomAD |
|
CA5830301 COSM688195 rs750028815 |
244 | M>I | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs755714206 CA5830302 |
245 | M>V | No |
ClinGen ExAC gnomAD |
|
rs778141513 CA5830307 |
249 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs778141513 CA5830306 |
249 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830308 rs771175797 |
253 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA216525112 rs200631910 |
255 | E>G | No |
ClinGen gnomAD |
|
rs201576757 CA5830309 |
256 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA379189358 rs1359363776 COSM428966 |
259 | H>R | breast [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA216525120 rs200849173 |
259 | H>Y | No |
ClinGen Ensembl |
|
CA5830312 rs769931387 |
263 | E>K | No |
ClinGen ExAC gnomAD |
|
CA5830334 rs199615736 |
266 | H>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA5830333 rs768846227 |
266 | H>R | No |
ClinGen ExAC gnomAD |
|
rs761584988 CA5830335 |
267 | K>E | No |
ClinGen ExAC gnomAD |
|
CA379190241 rs1365412632 |
272 | H>Y | No |
ClinGen TOPMed |
|
rs760406748 CA5830338 |
273 | R>C | No |
ClinGen ExAC gnomAD |
|
rs765987346 CA5830339 |
273 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830341 rs759102383 |
276 | E>D | No |
ClinGen ExAC gnomAD |
|
rs1441773650 CA379190334 |
276 | E>V | No |
ClinGen gnomAD |
|
rs764662510 CA5830342 |
277 | V>A | No |
ClinGen ExAC |
|
CA5830344 rs200324686 |
280 | V>L | No |
ClinGen 1000Genomes ExAC |
|
rs1474279628 CA379190539 |
285 | K>E | No |
ClinGen TOPMed gnomAD |
|
rs781644310 CA379190550 |
285 | K>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs781644310 CA5830345 |
285 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1034949340 CA379190567 |
287 | R>C | No |
ClinGen TOPMed gnomAD |
|
CA379190573 rs1565168009 |
287 | R>H | No |
ClinGen Ensembl |
|
rs1034949340 CA216526494 |
287 | R>S | No |
ClinGen TOPMed gnomAD |
|
CA216526501 rs900508637 |
288 | D>A | No |
ClinGen Ensembl |
|
rs11558144 CA216526498 |
288 | D>N | No |
ClinGen TOPMed |
|
rs138848040 CA5830349 |
291 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs138848040 CA216526509 |
291 | N>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs755110480 CA5830351 |
298 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs748135332 CA5830353 |
299 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA216526516 rs779075210 COSM1561411 |
299 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs200976596 CA216526522 |
304 | R>Q | No |
ClinGen Ensembl |
|
rs1182345081 CA379190958 |
306 | G>A | No |
ClinGen TOPMed |
|
CA5830355 rs773169744 |
307 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA216526530 rs201651708 |
308 | E>G | No |
ClinGen gnomAD |
|
CA379190982 rs1343604264 |
308 | E>K | No |
ClinGen gnomAD |
|
CA5830356 rs555151614 |
309 | N>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA216526542 rs866666473 |
311 | R>Q | No |
ClinGen TOPMed gnomAD |
|
rs770698758 CA5830357 |
311 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA379191109 rs1248955977 |
313 | R>C | No |
ClinGen gnomAD |
|
rs776331076 CA5830358 |
313 | R>H | No |
ClinGen ExAC gnomAD |
|
CA5830359 rs759132787 |
315 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs746960459 CA5830373 |
325 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830374 rs746960459 |
325 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs202060449 CA216529133 |
335 | L>V | No |
ClinGen gnomAD |
|
rs1038392859 CA216529136 |
337 | S>C | No |
ClinGen TOPMed |
|
CA379192350 rs1205454155 |
340 | S>* | No |
ClinGen TOPMed |
|
rs775189639 CA5830378 |
341 | W>R | No |
ClinGen ExAC gnomAD |
|
rs1565170451 CA379192381 |
342 | Y>C | No |
ClinGen Ensembl |
|
rs1565170455 CA379192435 |
346 | A>T | No |
ClinGen Ensembl |
|
CA5830379 rs762432922 |
347 | L>F | No |
ClinGen ExAC gnomAD |
|
CA5830381 rs773600734 |
355 | H>R | No |
ClinGen ExAC gnomAD |
|
CA379192594 rs1277445333 |
357 | V>G | No |
ClinGen gnomAD |
|
CA216529157 rs918568638 |
357 | V>M | No |
ClinGen TOPMed |
|
rs1590696838 CA379192606 |
358 | E>G | No |
ClinGen Ensembl |
|
CA379192623 rs1590696846 |
359 | V>G | No |
ClinGen Ensembl |
|
CA379192619 rs1565170474 |
359 | V>L | No |
ClinGen Ensembl |
|
rs1211799645 CA379192636 |
360 | Q>R | No |
ClinGen gnomAD |
|
CA379192654 rs1482744518 COSM1353759 |
361 | Y>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs1554971121 CA918808051 |
362 | Y>* | No |
ClinGen Ensembl |
|
CA379192695 rs1336563628 |
364 | I>L | No |
ClinGen Ensembl |
|
rs201378028 CA379192707 |
364 | I>M | No |
ClinGen TOPMed gnomAD |
|
CA379192855 rs1237381523 |
374 | L>P | No |
ClinGen TOPMed |
|
CA5830385 rs755359690 |
375 | V>L | No |
ClinGen ExAC gnomAD |
|
rs920883663 CA216529197 |
378 | E>D | No |
ClinGen TOPMed gnomAD |
|
rs758472622 CA5830388 |
378 | E>G | No |
ClinGen ExAC gnomAD |
|
rs201447973 CA379192916 |
379 | G>R | No |
ClinGen ExAC gnomAD |
|
rs201447973 CA5830389 |
379 | G>W | No |
ClinGen ExAC gnomAD |
|
rs755910491 CA5830413 |
380 | A>T | No |
ClinGen ExAC gnomAD |
|
CA216529460 rs1014925401 |
381 | E>D | No |
ClinGen Ensembl |
|
CA5830415 rs748912734 |
383 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs768311695 CA5830416 |
385 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1207204211 CA379193604 |
389 | T>I | No |
ClinGen TOPMed gnomAD |
|
rs992178341 CA216529472 |
391 | F>L | No |
ClinGen TOPMed |
|
CA379193661 rs1464170461 |
392 | G>A | No |
ClinGen TOPMed gnomAD |
|
rs771694025 CA5830419 |
394 | F>L | No |
ClinGen ExAC gnomAD |
|
rs1565170778 CA379193717 |
395 | H>R | No |
ClinGen Ensembl |
|
COSM926855 CA379193734 rs1430915758 |
396 | V>M | endometrium [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
CA216529485 rs969938570 |
401 | S>F | No |
ClinGen Ensembl |
|
CA379193879 rs1341390621 |
404 | D>V | No |
ClinGen Ensembl |
|
rs542166361 CA216529506 |
406 | D>E | No |
ClinGen 1000Genomes |
|
CA216529694 rs1025014749 |
417 | S>N | No |
ClinGen TOPMed |
|
rs774565443 CA5830443 |
418 | E>K | No |
ClinGen ExAC gnomAD |
|
CA379194095 rs1408566143 |
424 | R>Q | No |
ClinGen gnomAD |
|
rs200892145 CA379194094 |
424 | R>W | No |
ClinGen TOPMed gnomAD |
|
CA379194109 rs1565170954 |
426 | R>H | No |
ClinGen Ensembl |
|
CA5830445 rs767609050 |
428 | H>Y | No |
ClinGen ExAC gnomAD |
|
rs199666087 CA216529732 |
431 | Q>K | No |
ClinGen TOPMed |
|
CA379194155 rs1449851676 |
433 | I>F | No |
ClinGen TOPMed gnomAD |
|
CA379194160 COSM3809201 rs1367717016 |
434 | E>K | breast [Cosmic] | No |
ClinGen cosmic curated TOPMed |
COSM688192 CA379194193 rs1403228947 |
438 | G>A | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA379194214 rs1472831509 |
441 | I>T | No |
ClinGen gnomAD |
|
rs754868552 CA5830449 |
441 | I>V | No |
ClinGen ExAC gnomAD |
|
CA216529771 rs374484530 |
442 | V>F | No |
ClinGen ESP TOPMed |
|
CA379194233 rs1590697690 |
444 | N>T | No |
ClinGen Ensembl |
|
rs925534511 CA216529778 |
445 | P>L | No |
ClinGen TOPMed |
|
CA379194246 rs1411280995 |
446 | G>D | No |
ClinGen TOPMed gnomAD |
|
rs200795250 CA379194260 |
448 | H>P | No |
ClinGen Ensembl |
|
rs200795250 CA216529783 |
448 | H>R | No |
ClinGen Ensembl |
|
rs114915823 CA5830451 |
452 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1590697726 CA379194287 |
453 | A>S | No |
ClinGen Ensembl |
|
rs1367567586 CA379194288 |
453 | A>V | No |
ClinGen gnomAD |
|
CA216529794 rs371655991 |
456 | I>T | No |
ClinGen ESP TOPMed |
|
COSM688191 CA379194317 rs777537168 |
457 | D>E | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA5830454 COSM688191 rs777537168 |
457 | D>E | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs1565171050 CA379194331 |
459 | S>R | No |
ClinGen Ensembl |
|
rs1273296963 CA379194339 |
460 | W>C | No |
ClinGen TOPMed |
|
rs1345014433 CA379194359 |
463 | S>N | No |
ClinGen TOPMed |
|
CA5830456 rs201717730 |
464 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1378840995 CA379194366 |
464 | T>I | No |
ClinGen gnomAD |
|
rs749694629 CA5830457 |
465 | R>C | No |
ClinGen ExAC gnomAD |
|
CA5830458 rs375914426 |
465 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA216529823 rs200082116 |
468 | P>S | No |
ClinGen Ensembl |
|
CA5830460 rs748403696 |
470 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830461 rs772317626 |
471 | F>Y | No |
ClinGen ExAC gnomAD |
|
CA379194426 rs1206470512 |
473 | M>I | No |
ClinGen gnomAD |
|
CA5830462 rs773397282 |
473 | M>V | No |
ClinGen ExAC gnomAD |
|
CA216529840 rs200776986 |
475 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA5830463 rs201022957 |
475 | D>N | No |
ClinGen ExAC gnomAD |
|
CA379194451 rs1447805570 |
477 | V>G | No |
ClinGen gnomAD |
|
CA5830466 rs199963821 |
477 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1308773341 CA379194460 |
478 | D>E | No |
ClinGen TOPMed |
|
CA379194473 rs1332729135 |
480 | M>I | No |
ClinGen gnomAD |
|
CA5830469 rs762820296 |
480 | M>T | No |
ClinGen ExAC gnomAD |
|
CA5830468 rs752580963 |
480 | M>V | No |
ClinGen ExAC gnomAD |
|
CA5830470 rs375031982 |
481 | D>N | No |
ClinGen ESP ExAC gnomAD |
|
rs1449184284 CA379194493 |
483 | E>K | No |
ClinGen TOPMed gnomAD |
|
rs1296246646 CA379194543 |
490 | M>I | No |
ClinGen gnomAD |
|
CA5830473 rs780512774 |
490 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA379194554 COSM178868 rs1406268204 |
492 | S>P | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs762929975 CA5830506 |
493 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762929975 CA5830505 |
493 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1355510063 CA379194772 |
494 | S>N | No |
ClinGen TOPMed |
|
CA5830507 rs541753141 |
494 | S>R | No |
ClinGen 1000Genomes ExAC |
|
rs1185027471 CA379194782 |
495 | L>Q | No |
ClinGen gnomAD |
|
CA379194792 rs1565172113 |
496 | Q>* | No |
ClinGen Ensembl |
|
CA5830508 rs761641457 |
496 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs964563960 CA379194820 |
498 | S>I | No |
ClinGen gnomAD |
|
rs964563960 CA216531254 |
498 | S>N | No |
ClinGen gnomAD |
|
CA5830511 COSM926857 rs760242778 |
500 | R>Q | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs772902514 CA5830510 |
500 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830513 rs753214223 |
501 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1425652473 CA379194870 |
501 | Q>H | No |
ClinGen TOPMed |
|
rs753214223 CA379194862 |
501 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830514 rs149456514 |
502 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA5830515 rs555016539 COSM1353760 |
502 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs555016539 CA216531276 |
502 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA379195250 rs1565172165 |
503 | L>P | No |
ClinGen Ensembl |
|
CA5830517 RCV000416109 rs200528072 |
504 | T>A | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA5830518 rs146873551 |
504 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA5830520 rs756277132 |
505 | E>D | No |
ClinGen ExAC gnomAD |
|
rs1228842060 CA379195265 |
506 | P>S | No |
ClinGen gnomAD |
|
rs200567276 CA216531307 |
507 | Q>R | No |
ClinGen TOPMed |
|
rs1343386197 CA379195278 |
508 | H>Y | No |
ClinGen gnomAD |
|
CA216531320 rs201419194 |
509 | G>C | No |
ClinGen Ensembl |
|
rs771891852 CA5830526 |
511 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs565192496 CA216531344 |
512 | S>F | No |
ClinGen 1000Genomes |
|
rs534419041 CA216533696 |
515 | D>Y | No |
ClinGen TOPMed gnomAD |
|
CA216533700 rs989607496 |
516 | L>F | No |
ClinGen TOPMed |
|
rs1406003724 CA379196593 |
517 | T>P | No |
ClinGen TOPMed |
|
CA5830581 rs751432488 |
518 | H>R | No |
ClinGen ExAC gnomAD |
|
CA379196615 rs1590703131 |
519 | S>Y | No |
ClinGen Ensembl |
|
CA5830583 rs199914458 |
520 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs745539009 CA379196628 |
521 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM1703359 rs745539009 CA5830584 |
521 | S>L | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA216533727 rs915446402 |
522 | E>G | No |
ClinGen TOPMed gnomAD |
|
rs1353009850 CA379196644 |
523 | S>C | No |
ClinGen gnomAD |
|
CA379196640 rs1590703165 |
523 | S>P | No |
ClinGen Ensembl |
|
rs141215990 CA5830586 |
524 | S>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA379196659 rs1291051290 |
525 | L>V | No |
ClinGen gnomAD |
|
rs146111967 CA5830587 |
527 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA379196681 rs1313776483 |
527 | M>R | No |
ClinGen TOPMed |
|
CA5830588 rs200078549 |
528 | S>N | No |
ClinGen ExAC gnomAD |
|
CA216533734 rs200078549 |
528 | S>T | No |
ClinGen ExAC gnomAD |
|
rs75185880 CA216533740 |
529 | D>A | No |
ClinGen Ensembl |
|
rs142239530 CA379196699 |
530 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA216533745 rs202166909 |
532 | R>C | No |
ClinGen TOPMed gnomAD |
|
CA5830591 rs771442242 |
532 | R>H | No |
ClinGen ExAC gnomAD |
|
rs1161147370 CA379196720 |
534 | A>T | No |
ClinGen gnomAD |
|
rs1565173966 CA379196737 |
536 | K>N | No |
ClinGen Ensembl |
|
CA5830592 rs140122024 |
536 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1169759545 CA379196742 |
537 | P>H | No |
ClinGen gnomAD |
|
CA5830595 rs765543495 |
539 | Q>P | No |
ClinGen ExAC gnomAD |
|
rs1390592487 CA379196760 |
540 | M>R | No |
ClinGen TOPMed gnomAD |
|
CA379196767 rs1329876132 |
541 | S>G | No |
ClinGen gnomAD |
|
rs1337761156 CA379196771 |
541 | S>N | No |
ClinGen TOPMed gnomAD |
|
CA5830597 COSM428968 rs202147687 |
542 | R>H | haematopoietic_and_lymphoid_tissue breast [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
rs370846246 CA379196774 |
542 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA5830599 rs201273429 |
543 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA216533826 rs1018980327 |
545 | D>H | No |
ClinGen Ensembl |
|
CA379196802 rs1484105807 |
546 | E>D | No |
ClinGen TOPMed |
|
rs371443357 CA5830602 |
546 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA216533845 rs199644267 |
547 | A>T | No |
ClinGen Ensembl |
|
rs755851829 CA5830603 |
549 | N>H | No |
ClinGen ExAC TOPMed |
|
CA379196823 rs1458830346 |
550 | A>T | No |
ClinGen gnomAD |
|
rs1242032425 CA379196831 |
551 | M>T | No |
ClinGen gnomAD |
|
rs779827395 CA5830604 |
552 | T>I | No |
ClinGen ExAC gnomAD |
|
CA379196837 rs1590703292 |
552 | T>P | No |
ClinGen Ensembl |
|
rs976832103 CA216533869 |
553 | S>F | No |
ClinGen TOPMed |
|
CA5830605 rs748820994 |
554 | N>S | No |
ClinGen ExAC gnomAD |
|
CA5830606 rs200525396 |
555 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs200525396 CA216533896 |
555 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA379196858 rs1347670591 |
556 | S>G | No |
ClinGen gnomAD |
|
rs201543900 CA216533910 |
556 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830607 rs201543900 |
556 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830609 rs199503470 |
558 | R>Q | No |
ClinGen ExAC TOPMed |
|
rs1468467874 CA379196874 |
559 | L>M | No |
ClinGen TOPMed gnomAD |
|
rs1036967931 CA216533926 |
560 | I>T | No |
ClinGen TOPMed gnomAD |
|
CA5830612 rs770049339 |
561 | E>D | No |
ClinGen ExAC gnomAD |
|
rs200557274 CA5830611 |
561 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs368206268 CA216533947 |
563 | V>G | No |
ClinGen Ensembl |
|
rs1293438304 CA379196917 |
563 | V>I | No |
ClinGen gnomAD |
|
CA5830613 rs775795048 |
564 | H>Y | No |
ClinGen ExAC gnomAD |
|
CA5830615 rs763113323 |
566 | G>E | No |
ClinGen ExAC gnomAD |
|
CA379196986 rs1321818228 |
567 | S>P | No |
ClinGen TOPMed gnomAD |
|
rs201520428 CA216533955 |
567 | S>Y | No |
ClinGen TOPMed |
|
rs527880533 CA216533959 |
569 | V>M | No |
ClinGen Ensembl |
|
rs374253450 CA216533961 |
570 | E>K | No |
ClinGen ESP TOPMed gnomAD |
|
CA379197046 rs1554972161 |
571 | K>R | No |
ClinGen Ensembl |
|
CA379197060 rs1230192111 |
572 | L>Q | No |
ClinGen TOPMed gnomAD |
|
CA5830617 rs774457630 |
574 | D>E | No |
ClinGen ExAC gnomAD |
|
CA5830618 rs761861717 |
575 | S>R | No |
ClinGen ExAC gnomAD |
|
CA5830619 rs767552538 |
577 | A>V | No |
ClinGen ExAC gnomAD |
|
rs1219884557 CA379197260 |
586 | L>P | No |
ClinGen TOPMed |
|
CA5830622 rs201297020 |
588 | H>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs753563618 CA5830623 |
590 | L>P | No |
ClinGen ExAC gnomAD |
|
CA5830624 rs776241052 |
591 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs983861427 CA216534034 |
591 | D>H | No |
ClinGen Ensembl |
|
CA5830626 rs201838782 |
594 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830627 rs370556532 |
597 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA216534080 rs199874116 |
598 | E>D | No |
ClinGen Ensembl |
|
rs1344088203 CA379197421 |
599 | L>P | No |
ClinGen gnomAD |
|
CA216534092 rs376050145 |
600 | S>I | No |
ClinGen TOPMed gnomAD |
|
CA216534086 rs376050145 |
600 | S>N | No |
ClinGen TOPMed gnomAD |
|
rs202057312 CA216534103 |
601 | P>H | No |
ClinGen Ensembl |
|
CA5830629 rs200960094 |
601 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830632 rs749622475 |
603 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749622475 CA5830633 |
603 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1264716220 CA379197470 |
604 | P>L | No |
ClinGen gnomAD |
|
rs774545394 CA5830634 |
604 | P>S | No |
ClinGen ExAC gnomAD |
|
rs139432975 CA5830635 RCV000243944 |
605 | P>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs771983048 CA5830636 |
606 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830637 rs200324378 |
607 | G>S | No |
ClinGen ExAC gnomAD |
|
CA379197513 rs1435248579 |
608 | S>P | No |
ClinGen gnomAD |
|
CA379197542 rs1430104057 |
610 | H>Y | No |
ClinGen gnomAD |
|
CA5830640 rs560566339 |
615 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs200385231 CA216534174 |
616 | S>C | No |
ClinGen Ensembl |
|
rs769589075 CA216534177 |
617 | H>Q | No |
ClinGen TOPMed |
|
rs769589075 CA379197644 |
617 | H>Q | No |
ClinGen TOPMed |
|
rs1053906651 CA216534180 |
619 | P>R | No |
ClinGen Ensembl |
|
CA379197659 rs1197018356 |
619 | P>T | No |
ClinGen TOPMed |
|
CA379197716 rs1590703543 |
623 | D>A | No |
ClinGen Ensembl |
|
CA379197704 rs765041336 |
623 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs765041336 CA5830642 |
623 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA379197740 rs1303957101 |
625 | D>H | No |
ClinGen TOPMed gnomAD |
|
CA379197787 rs1164354267 |
628 | S>F | No |
ClinGen TOPMed gnomAD |
|
CA216534204 rs893886813 |
629 | P>S | No |
ClinGen gnomAD |
|
CA379197798 rs1590703566 |
630 | V>I | No |
ClinGen Ensembl |
|
CA379197821 rs1239678100 |
631 | G>A | No |
ClinGen gnomAD |
|
RCV000578905 rs756617504 CA5830647 |
634 | R>* | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs200632934 CA5830648 |
634 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA379197867 rs1363037423 |
635 | A>T | No |
ClinGen gnomAD |
|
CA379197890 rs1175789204 |
636 | L>P | No |
ClinGen gnomAD |
|
CA379197886 rs1175789204 |
636 | L>R | No |
ClinGen gnomAD |
|
CA216534231 rs201852473 |
638 | A>T | No |
ClinGen gnomAD |
|
CA216534234 rs930699942 |
640 | R>* | No |
ClinGen TOPMed |
|
rs769001716 CA5830650 |
640 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA216534239 rs1018411314 |
642 | T>A | No |
ClinGen Ensembl |
|
CA216534243 rs779108452 |
643 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA5830651 rs779108452 |
643 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA216534252 rs200481624 |
644 | I>M | No |
ClinGen Ensembl |
|
CA379197982 rs1164327463 |
645 | P>S | No |
ClinGen TOPMed gnomAD |
|
CA379197997 rs1590703630 |
646 | H>P | No |
ClinGen Ensembl |
|
CA5830654 rs773130037 |
646 | H>Y | No |
ClinGen ExAC gnomAD |
|
rs1372331507 CA379198011 |
647 | L>Q | No |
ClinGen gnomAD |
|
CA379198019 rs1447309539 |
648 | A>T | No |
ClinGen gnomAD |
|
CA216534262 rs200666474 |
649 | G>C | No |
ClinGen Ensembl |
|
CA379198048 rs1311329283 |
650 | K>N | No |
ClinGen gnomAD |
|
CA216534265 rs939881872 |
651 | K>M | No |
ClinGen TOPMed |
|
CA379198064 rs1565174316 |
651 | K>N | No |
ClinGen Ensembl |
|
rs201992816 CA216534269 |
652 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs1590703662 CA379198090 |
654 | A>V | No |
ClinGen Ensembl |
|
CA216534282 rs201231955 |
657 | D>A | No |
ClinGen Ensembl |
|
CA5830657 rs142357642 |
657 | D>N | No |
ClinGen ESP ExAC gnomAD |
|
CA5830658 rs776698533 |
659 | G>S | No |
ClinGen ExAC gnomAD |
|
CA5830660 rs765059333 |
661 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs759472644 CA5830659 |
661 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763770274 CA5830663 |
663 | E>K | No |
ClinGen ExAC gnomAD |
|
CA379198221 rs1590703688 |
664 | E>G | No |
ClinGen Ensembl |
|
CA5830664 rs751078011 |
665 | T>A | No |
ClinGen ExAC gnomAD |
|
rs766934652 CA5830666 COSM129469 |
667 | S>C | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA379198318 rs1355379737 |
670 | G>D | No |
ClinGen TOPMed gnomAD |
|
CA379198330 RCV000788310 rs779204802 |
671 | R>L | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs779204802 CA5830669 |
671 | R>P | No |
ClinGen ExAC gnomAD |
|
CA5830668 rs755346239 |
671 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA216534318 rs1003906655 |
672 | K>E | No |
ClinGen TOPMed |
|
rs1200217912 CA379198342 |
672 | K>R | No |
ClinGen TOPMed |
|
CA5830671 rs758590974 |
673 | K>N | No |
ClinGen ExAC gnomAD |
|
CA379198378 rs1451829112 |
674 | F>L | No |
ClinGen gnomAD |
|
rs1346205421 CA379198428 |
677 | K>N | No |
ClinGen TOPMed |
|
CA5830673 rs747118337 |
678 | I>F | No |
ClinGen ExAC gnomAD |
|
rs1590703737 CA379198482 |
681 | K>E | No |
ClinGen Ensembl |
|
rs1486705680 CA379198487 |
681 | K>T | No |
ClinGen gnomAD |
|
rs202047054 CA5830675 |
684 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
No associated diseases with Q13586
No regional properties for Q13586
Type | Name | Position | InterPro Accession |
---|---|---|---|
No domain, repeats, and functional sites for Q13586 |
Functions
Description | ||
---|---|---|
EC Number | ||
Subcellular Localization |
|
|
PANTHER Family | PTHR15136 | STROMAL INTERACTION MOLECULE HOMOLOG |
PANTHER Subfamily | PTHR15136:SF9 | STROMAL INTERACTION MOLECULE 1 |
PANTHER Protein Class | ||
PANTHER Pathway Category | No pathway information available |
9 GO annotations of cellular component
Name | Definition |
---|---|
cortical endoplasmic reticulum | A cortical network of highly dynamic tubules that are juxtaposed to the plasma membrane and undergo ring closure and tubule-branching movements. |
endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
integral component of endoplasmic reticulum membrane | The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
microtubule | Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle. |
plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
plasma membrane raft | A membrane raft that is part of the plasma membrane. |
sarcoplasmic reticulum membrane | The lipid bilayer surrounding the sarcoplasmic reticulum. |
5 GO annotations of molecular function
Name | Definition |
---|---|
calcium channel regulator activity | Modulates the activity of a calcium channel. |
calcium ion binding | Binding to a calcium ion (Ca2+). |
identical protein binding | Binding to an identical protein or proteins. |
microtubule plus-end binding | Binding to the plus end of a microtubule. |
protease binding | Binding to a protease or a peptidase. |
9 GO annotations of biological process
Name | Definition |
---|---|
activation of store-operated calcium channel activity | A process that initiates the activity of an inactive store-operated calcium channel. |
cellular calcium ion homeostasis | Any process involved in the maintenance of an internal steady state of calcium ions at the level of a cell. |
detection of calcium ion | The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal. |
enamel mineralization | The process in which calcium salts, mainly carbonated hydroxyapatite, are deposited in tooth enamel. |
positive regulation of adenylate cyclase activity | Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity. |
positive regulation of angiogenesis | Any process that activates or increases angiogenesis. |
regulation of calcium ion transport | Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
regulation of store-operated calcium entry | Any process that modulates the frequency, rate or extent of store-operated calcium entry. |
store-operated calcium entry | A calcium ion entry mechanism in the plasma membrane activated by the depletion of calcium ion from the internal calcium ion store in the endoplasmic reticulum. |
7 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q58CP9 | STIM1 | Stromal interaction molecule 1 | Bos taurus (Bovine) | SS |
P83094 | Stim | Stromal interaction molecule homolog | Drosophila melanogaster (Fruit fly) | SS |
Q9P246 | STIM2 | Stromal interaction molecule 2 | Homo sapiens (Human) | EV |
P83093 | Stim2 | Stromal interaction molecule 2 | Mus musculus (Mouse) | SS |
P70302 | Stim1 | Stromal interaction molecule 1 | Mus musculus (Mouse) | SS |
P84903 | Stim1 | Stromal interaction molecule 1 | Rattus norvegicus (Rat) | SS |
G5EF60 | stim-1 | Stromal interaction molecule 1 | Caenorhabditis elegans | SS |
10 | 20 | 30 | 40 | 50 | 60 |
MDVCVRLALW | LLWGLLLHQG | QSLSHSHSEK | ATGTSSGANS | EESTAAEFCR | IDKPLCHSED |
70 | 80 | 90 | 100 | 110 | 120 |
EKLSFEAVRN | IHKLMDDDAN | GDVDVEESDE | FLREDLNYHD | PTVKHSTFHG | EDKLISVEDL |
130 | 140 | 150 | 160 | 170 | 180 |
WKAWKSSEVY | NWTVDEVVQW | LITYVELPQY | EETFRKLQLS | GHAMPRLAVT | NTTMTGTVLK |
190 | 200 | 210 | 220 | 230 | 240 |
MTDRSHRQKL | QLKALDTVLF | GPPLLTRHNH | LKDFMLVVSI | VIGVGGCWFA | YIQNRYSKEH |
250 | 260 | 270 | 280 | 290 | 300 |
MKKMMKDLEG | LHRAEQSLHD | LQERLHKAQE | EHRTVEVEKV | HLEKKLRDEI | NLAKQEAQRL |
310 | 320 | 330 | 340 | 350 | 360 |
KELREGTENE | RSRQKYAEEE | LEQVREALRK | AEKELESHSS | WYAPEALQKW | LQLTHEVEVQ |
370 | 380 | 390 | 400 | 410 | 420 |
YYNIKKQNAE | KQLLVAKEGA | EKIKKKRNTL | FGTFHVAHSS | SLDDVDHKIL | TAKQALSEVT |
430 | 440 | 450 | 460 | 470 | 480 |
AALRERLHRW | QQIEILCGFQ | IVNNPGIHSL | VAALNIDPSW | MGSTRPNPAH | FIMTDDVDDM |
490 | 500 | 510 | 520 | 530 | 540 |
DEEIVSPLSM | QSPSLQSSVR | QRLTEPQHGL | GSQRDLTHSD | SESSLHMSDR | QRVAPKPPQM |
550 | 560 | 570 | 580 | 590 | 600 |
SRAADEALNA | MTSNGSHRLI | EGVHPGSLVE | KLPDSPALAK | KALLALNHGL | DKAHSLMELS |
610 | 620 | 630 | 640 | 650 | 660 |
PSAPPGGSPH | LDSSRSHSPS | SPDPDTPSPV | GDSRALQASR | NTRIPHLAGK | KAVAEEDNGS |
670 | 680 | ||||
IGEETDSSPG | RKKFPLKIFK | KPLKK |