Q13237
Gene name |
PRKG2 (PRKGR2) |
Protein name |
cGMP-dependent protein kinase 2 |
Names |
cGK 2, cGK2, cGMP-dependent protein kinase II, cGKII |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:5593 |
EC number |
2.7.11.12: Protein-serine/threonine kinases |
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
593-615 (Activation loop from InterPro)
Target domain |
453-711 (Protein kinase domain) |
Relief mechanism |
|
Assay |
|
Autoinhibited structure

Activated structure

7 structures for Q13237
463 variants for Q13237
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
VAR_086537 | 569 | R>del | AMD4; decreased protein abundance; unable to phosphorylate RAF1 in response to FGF2 and to inhibit FGF2-induced MAPK signaling; unable to suppress SOX9-induced COL2A1 expression; unable to upregulate COL10A1 [UniProt] | Yes | UniProt |
CA99612799 rs901413158 |
2 | G>V | No |
ClinGen Ensembl |
|
rs1560628921 CA357162219 |
4 | G>D | No |
ClinGen Ensembl |
|
rs1401276949 CA357162206 |
6 | V>E | No |
ClinGen Ensembl |
|
CA357162210 rs1560628906 |
6 | V>M | No |
ClinGen Ensembl |
|
CA2984035 rs551494338 |
8 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs549621974 CA99612791 |
9 | K>R | No |
ClinGen 1000Genomes TOPMed |
|
CA2984034 rs139093432 |
10 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA357162158 rs757688228 |
13 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs781488557 CA2984033 |
13 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357162154 rs1377821319 |
14 | P>L | No |
ClinGen gnomAD |
|
rs747364669 CA2984031 |
14 | P>S | No |
ClinGen ExAC gnomAD |
|
CA2984029 rs754590954 |
15 | D>N | No |
ClinGen ExAC gnomAD |
|
COSM588360 CA357162150 rs754590954 COSM588359 |
15 | D>Y | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs765708325 CA99612741 |
17 | H>R | No |
ClinGen Ensembl |
|
rs755518936 CA2984026 |
18 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs192577898 CA2984025 |
19 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA357162112 rs963315125 |
21 | L>F | No |
ClinGen TOPMed gnomAD |
|
rs963315125 CA99612730 |
21 | L>V | No |
ClinGen TOPMed gnomAD |
|
rs34956759 CA99612723 |
22 | T>I | No |
ClinGen Ensembl |
|
CA99612725 VAR_051633 rs34956759 |
22 | T>S | No |
ClinGen UniProt Ensembl dbSNP |
|
CA99612714 rs916856737 |
23 | T>A | No |
ClinGen TOPMed |
|
rs148254773 CA2984022 |
23 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA2984021 rs763941574 |
24 | D>G | No |
ClinGen ExAC gnomAD |
|
rs763941574 CA99612690 |
24 | D>V | No |
ClinGen ExAC gnomAD |
|
rs1486763048 CA357162099 |
24 | D>Y | No |
ClinGen gnomAD |
|
CA2984017 rs183060437 |
27 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
COSM481578 COSM481577 CA2984018 rs187350442 |
27 | R>W | Variant assessed as Somatic; 0.0002314 impact. kidney large_intestine urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
CA357162076 rs1355655926 |
28 | N>S | No |
ClinGen gnomAD |
|
CA2984015 rs777257586 |
29 | K>E | No |
ClinGen ExAC gnomAD |
|
CA99612664 rs1032955278 |
29 | K>R | No |
ClinGen TOPMed |
|
CA357162065 rs771410076 CA2984014 |
30 | V>L | No |
ClinGen ExAC gnomAD |
|
rs771410076 CA357162066 |
30 | V>M | No |
ClinGen ExAC gnomAD |
|
CA99612650 rs966676731 |
31 | T>I | No |
ClinGen TOPMed gnomAD |
|
CA2984012 rs759299128 |
34 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs547943840 CA2984011 |
39 | R>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs528256766 CA2984010 |
43 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA357161961 rs1200953365 |
45 | Q>R | No |
ClinGen TOPMed |
|
rs966786904 CA99612607 |
46 | E>G | No |
ClinGen Ensembl |
|
rs1418761850 CA357161957 |
46 | E>K | No |
ClinGen gnomAD |
|
CA99612590 rs199612321 |
47 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs199612321 COSM3409571 CA2984005 COSM3409572 |
47 | R>Q | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
CA2984006 rs369304947 |
47 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA99612588 rs368293735 |
50 | H>N | No |
ClinGen Ensembl |
|
rs1488090708 CA357161930 |
50 | H>R | No |
ClinGen gnomAD |
|
CA357161924 rs1560628512 |
51 | L>V | No |
ClinGen Ensembl |
|
CA357161903 rs1234522253 |
53 | E>D | No |
ClinGen gnomAD |
|
TCGA novel | 53 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA357161905 rs1271233219 |
53 | E>V | No |
ClinGen gnomAD |
|
rs143773305 CA99612586 |
54 | L>V | No |
ClinGen ESP |
|
rs763996547 CA357161896 |
55 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763996547 CA2984002 |
55 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2984003 rs138293539 |
55 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs901059775 CA99612576 |
56 | E>G | No |
ClinGen Ensembl |
|
CA2984000 rs753033493 |
57 | Q>E | No |
ClinGen ExAC gnomAD |
|
rs573862255 CA2983999 |
57 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA2983998 rs759714578 |
58 | L>M | No |
ClinGen ExAC gnomAD |
|
CA2983997 rs543931109 |
59 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
TCGA novel | 59 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 60 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs770954502 CA2983996 |
60 | K>E | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 60 | K>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 62 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1278472990 CA357161834 |
65 | I>M | No |
ClinGen gnomAD |
|
CA357161829 rs1307252887 |
66 | A>D | No |
ClinGen TOPMed |
|
rs1240056510 CA357161833 |
66 | A>T | No |
ClinGen TOPMed |
|
CA2983995 rs772997158 |
72 | L>F | No |
ClinGen ExAC gnomAD |
|
CA2983994 rs371926830 |
75 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA2983993 rs772427647 |
77 | I>V | No |
ClinGen ExAC gnomAD |
|
CA357161727 rs1468912770 |
81 | K>E | No |
ClinGen gnomAD |
|
rs1193625346 CA357161690 |
86 | V>A | No |
ClinGen gnomAD |
|
CA357161692 rs1256836464 |
86 | V>M | No |
ClinGen gnomAD |
|
rs1228525457 CA357161684 |
87 | H>R | No |
ClinGen gnomAD |
|
CA2983992 rs748455274 |
87 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1301770630 CA357161677 |
88 | M>T | No |
ClinGen TOPMed gnomAD |
|
rs1007254791 CA99612545 |
88 | M>V | No |
ClinGen gnomAD |
|
CA2983991 rs779814922 |
89 | Q>E | No |
ClinGen ExAC gnomAD |
|
CA357161657 rs1466542604 |
91 | G>R | No |
ClinGen TOPMed gnomAD |
|
rs769307657 CA357161647 |
92 | S>R | No |
ClinGen ExAC gnomAD |
|
CA2983989 rs147037183 |
93 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
TCGA novel | 94 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1176638156 CA357161634 |
95 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs1239469098 CA357161626 |
96 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs751548718 CA2983986 |
97 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1434403074 CA357161614 |
98 | P>A | No |
ClinGen gnomAD |
|
rs369603303 CA99612526 |
98 | P>L | No |
ClinGen ESP TOPMed |
|
rs1434403074 CA357161613 |
98 | P>S | No |
ClinGen gnomAD |
|
rs777851898 CA2983985 |
99 | D>Y | No |
ClinGen ExAC gnomAD |
|
rs1047503891 CA99612505 |
101 | V>M | No |
ClinGen TOPMed |
|
rs1195310629 CA357161588 |
102 | P>S | No |
ClinGen TOPMed gnomAD |
|
rs34616910 CA2983983 VAR_040608 |
106 | H>R | No |
ClinGen UniProt ExAC dbSNP gnomAD |
|
rs759704753 CA2983981 COSM2955320 COSM2955321 |
107 | R>Q | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA2983982 rs375411166 |
107 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs918352690 CA99612497 |
110 | S>P | No |
ClinGen Ensembl |
|
rs1446716035 CA357161523 |
112 | L>F | No |
ClinGen TOPMed |
|
rs766457660 CA2983979 |
114 | S>C | No |
ClinGen ExAC gnomAD |
|
CA357161507 rs1422251937 |
115 | L>P | No |
ClinGen gnomAD |
|
rs577248170 CA2983977 |
116 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1375660918 CA357161493 |
117 | S>I | No |
ClinGen TOPMed |
|
CA357161417 rs1320186063 |
129 | P>A | No |
ClinGen TOPMed |
|
rs769016833 CA2983973 |
132 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2983974 rs774548154 |
132 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357161378 rs1560628014 |
135 | D>V | No |
ClinGen Ensembl |
|
CA357161375 rs1317000168 |
136 | L>V | No |
ClinGen TOPMed |
|
rs1560627989 CA357161369 |
137 | N>D | No |
ClinGen Ensembl |
|
CA2983971 rs780927194 |
139 | P>A | No |
ClinGen ExAC gnomAD |
|
rs770633181 CA357161352 |
139 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770633181 CA2983970 |
139 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770633181 CA357161351 |
139 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1256717141 CA357161349 |
140 | P>A | No |
ClinGen TOPMed gnomAD |
|
CA357161346 rs991077506 |
140 | P>L | No |
ClinGen TOPMed gnomAD |
|
CA99612461 rs991077506 |
140 | P>R | No |
ClinGen TOPMed gnomAD |
|
CA357161338 rs1578523827 |
141 | E>D | No |
ClinGen Ensembl |
|
rs867660938 CA99612458 |
143 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
CA357161300 rs1156755719 |
147 | A>T | No |
ClinGen gnomAD |
|
rs746507687 CA2983969 |
147 | A>V | No |
ClinGen ExAC gnomAD |
|
CA357161265 rs1578523781 |
152 | D>N | No |
ClinGen Ensembl |
|
CA99598255 rs922114447 |
157 | K>Q | No |
ClinGen TOPMed |
|
rs1444179826 CA357160559 |
157 | K>R | No |
ClinGen TOPMed |
|
CA357160558 rs1444179826 |
157 | K>T | No |
ClinGen TOPMed |
|
rs746562652 CA2983951 |
159 | I>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 161 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 161 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1386860638 CA357160526 |
162 | A>S | No |
ClinGen TOPMed |
|
rs772633886 CA2983950 |
163 | L>F | No |
ClinGen ExAC gnomAD |
|
rs1384290948 CA357160497 |
166 | N>S | No |
ClinGen TOPMed gnomAD |
|
CA357160489 rs1329254646 |
167 | Q>R | No |
ClinGen gnomAD |
|
CA99598247 rs199920901 |
171 | R>S | No |
ClinGen 1000Genomes |
|
rs748046133 CA2983948 |
173 | D>E | No |
ClinGen ExAC gnomAD |
|
rs771558283 CA2983949 |
173 | D>G | No |
ClinGen ExAC gnomAD |
|
CA357160451 rs1352627711 |
173 | D>Y | No |
ClinGen TOPMed |
|
rs1443783392 CA357160445 |
174 | P>S | No |
ClinGen TOPMed |
|
rs778839928 CA2983947 |
176 | Q>E | No |
ClinGen ExAC gnomAD |
|
CA357160413 rs1465001126 |
178 | K>N | No |
ClinGen gnomAD |
|
rs754794041 CA2983946 |
179 | D>N | No |
ClinGen ExAC gnomAD |
|
CA2983945 rs145769252 |
180 | M>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA357160372 rs1381652208 |
184 | M>L | No |
ClinGen TOPMed |
|
rs1169406430 CA357160370 |
184 | M>T | No |
ClinGen TOPMed gnomAD |
|
rs750603065 CA2983942 |
186 | G>R | No |
ClinGen ExAC gnomAD |
|
rs752074471 CA2983939 |
189 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs867102677 CA99598190 |
190 | Q>* | No |
ClinGen gnomAD |
|
rs1185102778 CA357160328 |
190 | Q>P | No |
ClinGen gnomAD |
|
rs1249124858 CA357160307 |
193 | S>C | No |
ClinGen gnomAD |
|
rs763463028 CA2983937 |
193 | S>I | No |
ClinGen ExAC gnomAD |
|
rs1467576675 CA357160301 |
194 | Y>H | No |
ClinGen gnomAD |
|
rs1560603331 CA357160270 |
198 | Q>* | No |
ClinGen Ensembl |
|
CA2983934 rs772859724 |
201 | P>S | No |
ClinGen ExAC gnomAD |
|
CA2983933 rs772859724 |
201 | P>T | No |
ClinGen ExAC gnomAD |
|
CA2983932 rs141031882 |
204 | H>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs866256614 CA99598145 |
204 | H>Y | No |
ClinGen Ensembl |
|
CA357160196 rs1306226278 |
209 | A>G | No |
ClinGen TOPMed |
|
CA357160166 rs1488021301 |
212 | R>Q | No |
ClinGen TOPMed |
|
TCGA novel | 214 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA2983909 rs775339041 |
215 | V>M | No |
ClinGen ExAC gnomAD |
|
CA2983908 rs769644668 |
216 | F>I | No |
ClinGen ExAC gnomAD |
|
rs376913619 CA2983907 |
216 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA357160135 rs1419074058 |
217 | Q>R | No |
ClinGen gnomAD |
|
CA2983906 rs566711398 |
218 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs985488263 CA99596801 |
221 | L>S | No |
ClinGen Ensembl |
|
rs961166144 CA99596798 |
224 | S>C | No |
ClinGen TOPMed gnomAD |
|
rs1208380099 CA357160076 |
226 | P>L | No |
ClinGen gnomAD |
|
rs747161506 CA2983904 |
227 | M>R | No |
ClinGen ExAC gnomAD |
|
COSM448208 CA357160074 rs1486539212 COSM448209 |
227 | M>V | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
CA99596788 rs953247501 |
228 | W>C | No |
ClinGen Ensembl |
|
TCGA novel | 229 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA2983901 rs753257317 |
234 | L>F | No |
ClinGen ExAC gnomAD |
|
rs151098655 CA99596769 |
239 | N>H | No |
ClinGen ESP TOPMed |
|
rs755449431 CA2983899 |
239 | N>T | No |
ClinGen ExAC gnomAD |
|
CA357159965 rs1455368632 |
240 | C>R | No |
ClinGen TOPMed |
|
CA2983897 rs767113787 |
241 | T>A | No |
ClinGen ExAC gnomAD |
|
CA99596749 rs959153317 |
243 | T>A | No |
ClinGen TOPMed |
|
TCGA novel | 248 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA99595998 rs1054269497 |
250 | T>S | No |
ClinGen Ensembl |
|
rs934497779 CA99595997 |
251 | N>S | No |
ClinGen TOPMed gnomAD |
|
CA357159733 rs1578460743 |
253 | K>N | No |
ClinGen Ensembl |
|
TCGA novel | 254 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1452689852 CA357159722 |
255 | W>* | No |
ClinGen TOPMed |
|
CA357159710 rs1458284600 |
257 | L>I | No |
ClinGen TOPMed gnomAD |
|
CA2983881 rs779609767 |
259 | R>* | No |
ClinGen ExAC gnomAD |
|
rs180794545 CA2983880 |
261 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA357159674 rs1192148070 |
262 | F>L | No |
ClinGen gnomAD |
|
rs367712750 CA99595973 |
266 | M>T | No |
ClinGen gnomAD |
|
TCGA novel | 267 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA2983877 rs756375957 |
268 | R>K | No |
ClinGen ExAC |
|
CA2983875 rs146408307 |
270 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA357159599 rs1391431769 |
273 | R>I | No |
ClinGen TOPMed |
|
rs757954080 CA99595958 |
274 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2983873 rs752173745 |
276 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA357159557 rs1306039853 |
279 | N>H | No |
ClinGen TOPMed |
|
rs759542953 CA2983871 |
279 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2983870 rs143992630 |
281 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
rs1328348075 CA357159502 |
285 | S>F | No |
ClinGen gnomAD |
|
rs924960171 CA99595046 |
285 | S>P | No |
ClinGen Ensembl |
|
COSM263109 rs144720151 COSM263110 CA2983849 |
288 | K>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
TCGA novel | 294 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1433874038 CA357159429 |
296 | T>A | No |
ClinGen TOPMed gnomAD |
|
CA357159427 rs1263265315 |
296 | T>I | No |
ClinGen TOPMed |
|
TCGA novel | 297 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs768785908 CA2983846 |
299 | I>V | No |
ClinGen ExAC |
|
CA2983845 rs762927878 |
300 | D>Y | No |
ClinGen ExAC gnomAD |
|
rs867286988 CA99595029 |
303 | E>* | No |
ClinGen Ensembl |
|
rs1478355961 CA357159376 |
303 | E>D | No |
ClinGen gnomAD |
|
CA2983843 rs770168040 |
304 | V>M | No |
ClinGen ExAC gnomAD |
|
CA357164759 rs1560584673 |
306 | Y>H | No |
ClinGen Ensembl |
|
rs1186764754 CA357164749 |
307 | Y>C | No |
ClinGen TOPMed gnomAD |
|
CA357164742 rs1171371884 |
308 | D>A | No |
ClinGen gnomAD |
|
rs778680190 CA2983818 |
312 | Y>C | No |
ClinGen ExAC gnomAD |
|
rs747364743 CA2983819 |
312 | Y>N | No |
ClinGen ExAC gnomAD |
|
rs778680190 CA357164713 |
312 | Y>S | No |
ClinGen ExAC gnomAD |
|
rs1443459138 CA357164707 |
313 | I>F | No |
ClinGen gnomAD |
|
CA99639764 rs866664833 |
313 | I>T | No |
ClinGen Ensembl |
|
TCGA novel | 313 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA99639763 rs1052242872 |
314 | I>V | No |
ClinGen Ensembl |
|
CA357164680 rs1206839034 |
317 | G>C | No |
ClinGen TOPMed gnomAD |
|
CA357164677 rs1203601013 COSM1291969 COSM1291968 |
317 | G>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA2983817 rs768165134 |
318 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA357164664 rs1353855899 |
319 | E>V | No |
ClinGen gnomAD |
|
rs144485448 CA2983816 |
320 | G>R | No |
ClinGen ESP ExAC gnomAD |
|
CA357164653 rs1448519875 |
321 | S>N | No |
ClinGen TOPMed gnomAD |
|
rs1481420599 CA357164642 |
323 | F>V | No |
ClinGen TOPMed |
|
CA357164633 rs1178935850 |
324 | F>L | No |
ClinGen TOPMed |
|
rs1325712223 CA357164627 |
324 | F>L | No |
ClinGen gnomAD |
|
rs1316143630 CA357164626 |
325 | I>V | No |
ClinGen gnomAD |
|
TCGA novel | 329 | G>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1388725896 CA357164587 |
330 | K>M | No |
ClinGen gnomAD |
|
rs1248584655 CA357164572 |
331 | V>I | No |
ClinGen gnomAD |
|
CA2983798 rs775142753 |
332 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1272181329 CA357164535 |
336 | S>N | No |
ClinGen TOPMed gnomAD |
|
CA357164525 rs1344204545 |
338 | E>K | No |
ClinGen gnomAD |
|
rs1240131166 CA357164515 |
339 | G>C | No |
ClinGen TOPMed |
|
rs745358480 CA357164513 |
339 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2983796 rs745358480 |
339 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs149280984 CA2983794 |
340 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs746914865 CA2983793 |
341 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA99638380 rs76774487 |
342 | Q>K | No |
ClinGen Ensembl |
|
rs947620733 CA99638376 |
342 | Q>R | No |
ClinGen TOPMed |
|
TCGA novel | 344 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA357164457 rs1457342227 |
348 | T>A | No |
ClinGen TOPMed |
|
rs753019548 | 348 | T>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
CA2983791 rs758141863 |
348 | T>I | No |
ClinGen ExAC |
|
TCGA novel | 349 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs752925020 CA357164452 |
349 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1002598743 CA99638332 |
350 | Q>R | No |
ClinGen TOPMed |
|
CA357164428 rs1368343110 |
352 | G>A | No |
ClinGen gnomAD |
|
TCGA novel | 357 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1432017643 CA357164376 |
359 | A>V | No |
ClinGen gnomAD |
|
rs1023017879 CA99638301 |
360 | L>F | No |
ClinGen Ensembl |
|
rs889657210 CA99636749 |
364 | D>N | No |
ClinGen Ensembl |
|
CA357164326 rs1179123431 |
365 | V>D | No |
ClinGen gnomAD |
|
TCGA novel | 374 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 375 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA99636746 rs1026716873 |
382 | I>V | No |
ClinGen Ensembl |
|
CA357164202 rs1288738398 |
383 | D>G | No |
ClinGen TOPMed |
|
rs769858245 CA2983770 |
384 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA357164199 rs769858245 |
384 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 386 | T>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1246608314 CA357164158 |
388 | N>S | No |
ClinGen gnomAD |
|
rs1313936811 CA357164132 |
392 | G>S | No |
ClinGen gnomAD |
|
rs1315872987 CA357164106 |
396 | E>* | No |
ClinGen TOPMed gnomAD |
|
CA2983751 rs768386011 |
400 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 400 | Y>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA357164073 rs768386011 |
400 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357164022 rs780252159 |
408 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2983747 rs147205318 |
410 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs781091224 CA2983746 |
410 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2983748 rs147205318 |
410 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA357164002 rs1257158457 |
411 | D>G | No |
ClinGen TOPMed gnomAD |
|
rs1257158457 CA357164001 |
411 | D>V | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 415 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs112801782 | 417 | A>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
CA2983743 rs764556712 |
417 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357163957 rs1167779908 |
417 | A>T | No |
ClinGen gnomAD |
|
CA99633324 rs764556712 |
417 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2983715 rs767062078 |
419 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA2983716 rs749988308 |
419 | R>W | No |
ClinGen ExAC gnomAD |
|
CA357163931 rs1415354794 |
420 | S>P | No |
ClinGen TOPMed |
|
rs1173754885 CA357163926 |
421 | M>V | No |
ClinGen gnomAD |
|
CA2983712 rs763997624 |
422 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs775376307 CA2983710 |
427 | S>Y | No |
ClinGen ExAC gnomAD |
|
CA357163877 rs1383742417 |
428 | K>Q | No |
ClinGen TOPMed |
|
rs1254385275 CA357163873 |
428 | K>R | No |
ClinGen TOPMed gnomAD |
|
CA2983708 rs138211185 |
429 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA2983707 rs776712275 |
430 | L>F | No |
ClinGen ExAC gnomAD |
|
rs537692247 CA357163855 |
431 | S>C | No |
ClinGen 1000Genomes gnomAD |
|
rs537692247 CA99632317 |
431 | S>F | No |
ClinGen 1000Genomes gnomAD |
|
TCGA novel | 433 | E>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA357163831 rs1267631846 |
435 | I>V | No |
ClinGen gnomAD |
|
rs778460125 CA2983704 |
438 | K>Q | No |
ClinGen ExAC gnomAD |
|
rs953313156 CA99632295 |
441 | V>M | No |
ClinGen TOPMed |
|
COSM1694602 CA357163758 COSM1694601 rs1212201931 |
445 | S>F | skin [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA2983702 rs200933391 |
446 | S>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1415041514 CA357163735 |
449 | P>L | No |
ClinGen gnomAD |
|
rs147027279 CA2983699 |
453 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA2983698 rs767064866 |
455 | I>F | No |
ClinGen ExAC gnomAD |
|
CA2983697 rs756811534 |
457 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357163657 rs1157938978 |
461 | V>G | No |
ClinGen TOPMed |
|
rs1435469465 CA357163662 |
461 | V>I | No |
ClinGen TOPMed |
|
TCGA novel | 466 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1185390240 CA357163611 |
468 | E>D | No |
ClinGen gnomAD |
|
CA2983670 rs370764328 |
484 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA99630821 rs370764328 |
484 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 485 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 489 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA357163413 rs1317206242 |
494 | Q>R | No |
ClinGen gnomAD |
|
CA2983667 rs761789084 |
499 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1436560351 CA357163370 |
500 | S>P | No |
ClinGen TOPMed |
|
CA99630789 rs939124305 |
502 | K>R | No |
ClinGen Ensembl |
|
rs774972977 CA2983666 |
503 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs201921306 CA99630757 |
503 | R>S | No |
ClinGen Ensembl |
|
CA357163292 rs1366494333 |
510 | S>C | No |
ClinGen TOPMed |
|
CA2983664 rs373273232 |
515 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1313433626 CA357162784 |
517 | Y>H | No |
ClinGen gnomAD |
|
CA2983644 rs148306160 |
518 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA2983643 rs371262558 |
518 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
TCGA novel | 521 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA357162745 rs1244720720 |
522 | D>E | No |
ClinGen gnomAD |
|
TCGA novel | 522 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs772888849 CA2983642 |
523 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1286809657 CA357162729 |
524 | K>N | No |
ClinGen gnomAD |
|
CA2983641 rs143281279 |
525 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA99628292 rs143281279 |
525 | Y>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA357162706 rs1302764465 |
528 | M>L | No |
ClinGen TOPMed gnomAD |
|
rs146605505 COSM1671103 CA99628274 COSM1671102 |
534 | L>V | ovary [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
rs1177307199 CA357162657 |
535 | G>D | No |
ClinGen gnomAD |
|
CA2983636 rs780130091 |
541 | I>V | No |
ClinGen ExAC gnomAD |
|
CA357162596 rs1255291620 |
544 | D>H | No |
ClinGen gnomAD |
|
rs1362144440 CA357162558 |
547 | S>R | No |
ClinGen gnomAD |
|
CA99626817 rs1044100600 |
548 | F>I | No |
ClinGen TOPMed |
|
CA2983618 rs768113639 |
549 | D>H | No |
ClinGen ExAC gnomAD |
|
rs1360098549 CA357162533 |
551 | P>A | No |
ClinGen TOPMed |
|
rs1228394520 CA357162531 |
551 | P>R | No |
ClinGen gnomAD |
|
rs980989962 CA99626790 |
552 | T>A | No |
ClinGen TOPMed |
|
CA357162527 rs980989962 |
552 | T>S | No |
ClinGen TOPMed |
|
TCGA novel | 556 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
COSM2157208 rs745754260 CA2983614 COSM2157207 |
557 | V>I | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs1372843897 CA357162457 |
562 | E>G | No |
ClinGen TOPMed |
|
CA357162410 rs1291510415 |
569 | R>* | No |
ClinGen gnomAD |
|
CA2983613 rs780864218 |
569 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357162408 rs780864218 |
569 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA2983612 rs757069865 |
571 | G>R | No |
ClinGen ExAC gnomAD |
|
rs1417333846 CA357162384 |
573 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA2983610 rs764354837 |
576 | D>E | No |
ClinGen ExAC gnomAD |
|
CA2983611 COSM3428702 COSM3428701 rs751785646 |
576 | D>Y | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA |
rs1359290257 CA357162362 |
577 | L>M | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 578 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 578 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA99626649 rs992380379 |
579 | P>L | No |
ClinGen TOPMed gnomAD |
|
rs992380379 CA357162345 |
579 | P>Q | No |
ClinGen TOPMed gnomAD |
|
rs140303803 CA99626657 COSM107928 |
579 | P>S | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA2983609 rs758512568 |
580 | E>D | No |
ClinGen ExAC gnomAD |
|
rs1490941351 CA357162289 |
587 | E>D | No |
ClinGen gnomAD |
|
CA357162285 rs1293006166 |
588 | G>C | No |
ClinGen gnomAD |
|
rs1560543898 CA357161227 |
594 | D>Y | No |
ClinGen Ensembl |
|
rs766890690 CA2983586 |
598 | A>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 599 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1337369957 CA357161178 |
600 | K>N | No |
ClinGen gnomAD |
|
CA2983584 rs561520112 |
601 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1395422824 CA357161159 |
603 | S>F | No |
ClinGen gnomAD |
|
rs1177991190 CA357161143 |
606 | K>E | No |
ClinGen TOPMed gnomAD |
|
CA357161135 rs1560543829 |
607 | T>A | No |
ClinGen Ensembl |
|
CA99606445 rs770087958 |
614 | P>A | No |
ClinGen Ensembl |
|
CA357161051 rs1410771687 |
619 | P>L | No |
ClinGen gnomAD |
|
TCGA novel | 621 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs769485643 CA2983580 |
622 | I>V | No |
ClinGen ExAC gnomAD |
|
CA2983579 rs759061992 |
623 | L>F | No |
ClinGen ExAC gnomAD |
|
rs899871798 CA99606409 |
624 | N>K | No |
ClinGen TOPMed |
|
CA2983577 rs770931091 |
624 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs776473582 CA2983578 |
624 | N>Y | No |
ClinGen ExAC gnomAD |
|
CA357161018 rs1442402207 |
625 | K>Q | No |
ClinGen gnomAD |
|
CA99606405 COSM352162 rs1041060556 COSM352163 |
627 | H>R | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA357161002 rs1236273798 |
627 | H>Y | No |
ClinGen TOPMed |
|
rs746868914 CA2983576 |
628 | D>G | No |
ClinGen ExAC |
|
rs112798364 CA99606395 |
630 | S>G | No |
ClinGen Ensembl |
|
rs145797166 CA2983573 |
631 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs372904531 CA2983574 |
631 | V>M | No |
ClinGen ESP ExAC gnomAD |
|
CA2983572 COSM1540727 COSM1540726 rs779096403 |
632 | D>Y | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA99606381 rs867153918 |
633 | F>I | No |
ClinGen Ensembl |
|
CA2983570 rs753927835 |
633 | F>L | No |
ClinGen ExAC |
|
CA2983571 rs755101378 |
633 | F>Y | No |
ClinGen ExAC |
|
CA2983568 rs779960963 |
634 | W>* | No |
ClinGen ExAC |
|
CA2983569 rs749314930 |
634 | W>* | No |
ClinGen ExAC gnomAD |
|
CA357160952 rs1285670222 |
634 | W>C | No |
ClinGen TOPMed |
|
CA553083457 rs1218620628 |
634 | W>R | No |
ClinGen gnomAD |
|
CA2983565 rs752793942 |
635 | S>* | No |
ClinGen ExAC |
|
rs760444787 CA2983564 |
635 | S>* | No |
ClinGen ExAC gnomAD |
|
rs1243906464 CA357160945 |
636 | L>M | No |
ClinGen TOPMed gnomAD |
|
rs768000424 CA2983561 |
640 | V>A | No |
ClinGen ExAC |
|
rs762265808 CA2983560 |
641 | Y>H | No |
ClinGen ExAC gnomAD |
|
rs752445893 CA2983559 |
643 | L>F | No |
ClinGen ExAC gnomAD |
|
rs575558482 CA2983557 |
645 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
CA99603102 rs868261975 |
650 | F>L | No |
ClinGen Ensembl |
|
CA357160838 rs1184886233 |
651 | S>C | No |
ClinGen gnomAD |
|
rs761702360 CA2983532 |
653 | V>I | No |
ClinGen ExAC gnomAD |
|
CA357160822 rs1242923777 |
654 | D>A | No |
ClinGen gnomAD |
|
rs988607517 CA99603089 |
654 | D>Y | No |
ClinGen TOPMed |
|
TCGA novel | 655 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs774157529 CA2983531 |
658 | T>S | No |
ClinGen ExAC gnomAD |
|
rs1489798291 CA357160783 |
659 | Y>C | No |
ClinGen gnomAD |
|
CA357160757 rs1357365730 |
663 | L>I | No |
ClinGen gnomAD |
|
rs370269168 CA99603042 |
666 | I>T | No |
ClinGen ESP gnomAD |
|
TCGA novel | 668 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA357160710 rs1434216778 |
669 | M>R | No |
ClinGen Ensembl |
|
CA357160714 rs1560539719 |
669 | M>V | No |
ClinGen Ensembl |
|
CA2983528 rs190673928 |
671 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA99603033 rs1000243529 |
673 | R>T | No |
ClinGen TOPMed |
|
TCGA novel | 675 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA2983526 rs745909792 |
676 | T>A | No |
ClinGen ExAC gnomAD |
|
CA2983525 rs781379008 |
676 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA99603016 rs867510159 |
677 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA357160658 rs757860585 |
677 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357160659 rs757860585 |
677 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2983524 rs757860585 |
677 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2983523 rs760133321 |
678 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA2983522 rs778199944 |
678 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
TCGA novel | 682 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA2983520 rs753582287 |
684 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357160616 rs753582287 |
684 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
TCGA novel | 684 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs987651040 CA99602959 |
685 | R>K | No |
ClinGen TOPMed gnomAD |
|
rs953648423 CA99602943 |
686 | L>F | No |
ClinGen Ensembl |
|
rs747582690 CA2983502 |
688 | R>S | No |
ClinGen ExAC gnomAD |
|
rs934758645 CA99601839 |
690 | N>S | No |
ClinGen Ensembl |
|
CA2983501 rs778125868 |
691 | P>T | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 694 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA357159895 rs1263357804 |
694 | R>S | No |
ClinGen TOPMed gnomAD |
|
CA2983499 rs748432620 CA2983500 |
697 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs376309288 CA2983497 |
699 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA2983496 rs368664749 |
702 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1374742486 CA357159825 |
703 | N>S | No |
ClinGen gnomAD |
|
rs780685462 CA357159817 |
704 | D>G | No |
ClinGen ExAC gnomAD |
|
CA2983495 rs780685462 |
704 | D>V | No |
ClinGen ExAC gnomAD |
|
rs924591161 CA99601757 |
705 | I>V | No |
ClinGen Ensembl |
|
CA357411273 rs1291561738 |
713 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
VAR_040609 | 716 | W>R | a colorectal adenocarcinoma sample; somatic mutation [UniProt] | No | UniProt |
rs1292504383 CA357411232 |
718 | G>A | No |
ClinGen gnomAD |
|
rs1292504383 CA357411234 |
718 | G>V | No |
ClinGen gnomAD |
|
rs748642381 CA2983462 |
719 | L>V | No |
ClinGen ExAC gnomAD |
|
rs1376288803 CA357411223 |
720 | K>R | No |
ClinGen gnomAD |
|
CA357411215 rs1324820305 |
721 | A>G | No |
ClinGen gnomAD |
|
CA2983459 rs140080099 |
722 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs780810215 CA2983458 |
722 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2983460 rs140080099 |
722 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA2983456 rs751059878 |
723 | S>R | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 724 | L>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA2983454 rs758280225 |
729 | Q>E | No |
ClinGen ExAC gnomAD |
|
CA357411166 rs1460014049 |
730 | R>G | No |
ClinGen TOPMed gnomAD |
|
rs894813536 CA100038411 |
735 | P>H | No |
ClinGen TOPMed |
|
rs766229697 CA2983429 |
736 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357411105 rs1560524867 |
737 | D>G | No |
ClinGen Ensembl |
|
TCGA novel | 737 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1451261429 CA357411098 |
738 | H>P | No |
ClinGen gnomAD |
|
CA100038408 rs965933216 |
739 | S>G | No |
ClinGen Ensembl |
|
CA357411090 rs1338254370 |
739 | S>N | No |
ClinGen gnomAD |
|
rs756304665 CA357411064 |
742 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750593016 CA2983427 |
744 | Y>H | No |
ClinGen ExAC gnomAD |
|
CA357411052 rs1422157793 |
744 | Y>S | No |
ClinGen gnomAD |
|
CA2983426 rs562688407 |
745 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA357411039 rs1560524806 |
746 | P>R | No |
ClinGen Ensembl |
|
rs1017752528 CA100038403 |
746 | P>S | No |
ClinGen TOPMed |
|
rs1007287261 CA100038398 |
755 | L>P | No |
ClinGen TOPMed |
|
rs1007287261 CA100038400 |
755 | L>Q | No |
ClinGen TOPMed |
|
CA100038393 rs868077737 COSM163747 COSM163748 |
761 | D>N | NS [Cosmic] | No |
ClinGen cosmic curated Ensembl |
rs1241403547 CA357410917 |
763 | F>W | No |
ClinGen gnomAD |
2 associated diseases with Q13237
[MIM: 619638]: Spondylometaphyseal dysplasia, Pagnamenta type (SMDP)
A form of spondylometaphyseal dysplasia, a group of short stature disorders distinguished by abnormalities in the vertebrae and the metaphyses of the tubular bones. SMDP is an autosomal recessive form characterized by short stature and mild platyspondyly with no disproportion between the limbs. Mild metaphyseal changes are present. {ECO:0000269|PubMed:34782440}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 619636]: Acromesomelic dysplasia 4 (AMD4)
A form of acromesomelic dysplasia, a skeletal disorder characterized by short stature, very short limbs and hand/foot malformations. The severity of limb abnormalities increases from proximal to distal with profoundly affected hands and feet showing brachydactyly and/or rudimentary fingers (knob-like fingers). AMD4 radiographic hallmarks include mild to moderate platyspondyly, moderate brachydactyly, iliac flaring, and metaphyseal alterations of the long bones that progressively increase with age. AMD4 inheritance is autosomal recessive. {ECO:0000269|PubMed:33106379, ECO:0000269|PubMed:34782440}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A form of spondylometaphyseal dysplasia, a group of short stature disorders distinguished by abnormalities in the vertebrae and the metaphyses of the tubular bones. SMDP is an autosomal recessive form characterized by short stature and mild platyspondyly with no disproportion between the limbs. Mild metaphyseal changes are present. {ECO:0000269|PubMed:34782440}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A form of acromesomelic dysplasia, a skeletal disorder characterized by short stature, very short limbs and hand/foot malformations. The severity of limb abnormalities increases from proximal to distal with profoundly affected hands and feet showing brachydactyly and/or rudimentary fingers (knob-like fingers). AMD4 radiographic hallmarks include mild to moderate platyspondyly, moderate brachydactyly, iliac flaring, and metaphyseal alterations of the long bones that progressively increase with age. AMD4 inheritance is autosomal recessive. {ECO:0000269|PubMed:33106379, ECO:0000269|PubMed:34782440}. Note=The disease is caused by variants affecting the gene represented in this entry.
11 regional properties for Q13237
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | Cyclic nucleotide-binding domain | 168 - 284 | IPR000595-1 |
domain | Cyclic nucleotide-binding domain | 286 - 409 | IPR000595-2 |
domain | Protein kinase domain | 453 - 711 | IPR000719 |
domain | AGC-kinase, C-terminal | 712 - 762 | IPR000961 |
active_site | Serine/threonine-protein kinase, active site | 572 - 584 | IPR008271 |
binding_site | Protein kinase, ATP binding site | 459 - 486 | IPR017441 |
conserved_site | Cyclic nucleotide-binding, conserved site | 195 - 211 | IPR018488-1 |
conserved_site | Cyclic nucleotide-binding, conserved site | 231 - 248 | IPR018488-2 |
conserved_site | Cyclic nucleotide-binding, conserved site | 313 - 329 | IPR018488-3 |
conserved_site | Cyclic nucleotide-binding, conserved site | 355 - 372 | IPR018488-4 |
domain | cGMP-dependent protein kinase, catalytic domain | 459 - 718 | IPR035014 |
Functions
Description | ||
---|---|---|
EC Number | 2.7.11.12 | Protein-serine/threonine kinases |
Subcellular Localization |
|
|
PANTHER Family | ||
PANTHER Subfamily | ||
PANTHER Protein Class | ||
PANTHER Pathway Category | No pathway information available |
3 GO annotations of cellular component
Name | Definition |
---|---|
apical plasma membrane | The region of the plasma membrane located at the apical end of the cell. |
cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
nuclear membrane | Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. |
7 GO annotations of molecular function
Name | Definition |
---|---|
ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
cGMP binding | Binding to cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate). |
cGMP-dependent protein kinase activity | cGMP dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. |
identical protein binding | Binding to an identical protein or proteins. |
mitogen-activated protein kinase binding | Binding to a mitogen-activated protein kinase. |
protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. |
protein serine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate. |
8 GO annotations of biological process
Name | Definition |
---|---|
negative regulation of chloride transport | Any process that stops, prevents or reduces the frequency, rate or extent of chloride transport. |
negative regulation of chondrocyte proliferation | Any process that stops, prevents, or reduces the frequency, rate or extent of the multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population. A chondrocyte is a polymorphic cell that forms cartilage. |
peptidyl-serine autophosphorylation | The phosphorylation by a protein of one or more of its own serine amino acid residues, or a serine residue on an identical protein. |
protein localization to plasma membrane | A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane. |
protein phosphorylation | The process of introducing a phosphate group on to a protein. |
regulation of chondrocyte differentiation | Any process that modulates the frequency, rate or extent of chondrocyte differentiation. |
signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
tetrahydrobiopterin metabolic process | The chemical reactions and pathways involving tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine. |
8 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
P00516 | PRKG1 | cGMP-dependent protein kinase 1 | Bos taurus (Bovine) | SS |
Q03043 | for | cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B | Drosophila melanogaster (Fruit fly) | SS |
P17612 | PRKACA | cAMP-dependent protein kinase catalytic subunit alpha | Homo sapiens (Human) | PR |
Q13976 | PRKG1 | cGMP-dependent protein kinase 1 | Homo sapiens (Human) | EV |
P0C605 | Prkg1 | cGMP-dependent protein kinase 1 | Mus musculus (Mouse) | SS |
Q61410 | Prkg2 | cGMP-dependent protein kinase 2 | Mus musculus (Mouse) | PR |
Q64595 | Prkg2 | cGMP-dependent protein kinase 2 | Rattus norvegicus (Rat) | PR |
O76360 | egl-4 | cGMP-dependent protein kinase egl-4 | Caenorhabditis elegans | PR |
10 | 20 | 30 | 40 | 50 | 60 |
MGNGSVKPKH | SKHPDGHSGN | LTTDALRNKV | TELERELRRK | DAEIQEREYH | LKELREQLSK |
70 | 80 | 90 | 100 | 110 | 120 |
QTVAIAELTE | ELQNKCIQLN | KLQDVVHMQG | GSPLQASPDK | VPLEVHRKTS | GLVSLHSRRG |
130 | 140 | 150 | 160 | 170 | 180 |
AKAGVSAEPT | TRTYDLNKPP | EFSFEKARVR | KDSSEKKLIT | DALNKNQFLK | RLDPQQIKDM |
190 | 200 | 210 | 220 | 230 | 240 |
VECMYGRNYQ | QGSYIIKQGE | PGNHIFVLAE | GRLEVFQGEK | LLSSIPMWTT | FGELAILYNC |
250 | 260 | 270 | 280 | 290 | 300 |
TRTASVKAIT | NVKTWALDRE | VFQNIMRRTA | QARDEQYRNF | LRSVSLLKNL | PEDKLTKIID |
310 | 320 | 330 | 340 | 350 | 360 |
CLEVEYYDKG | DYIIREGEEG | STFFILAKGK | VKVTQSTEGH | DQPQLIKTLQ | KGEYFGEKAL |
370 | 380 | 390 | 400 | 410 | 420 |
ISDDVRSANI | IAEENDVACL | VIDRETFNQT | VGTFEELQKY | LEGYVANLNR | DDEKRHAKRS |
430 | 440 | 450 | 460 | 470 | 480 |
MSNWKLSKAL | SLEMIQLKEK | VARFSSSSPF | QNLEIIATLG | VGGFGRVELV | KVKNENVAFA |
490 | 500 | 510 | 520 | 530 | 540 |
MKCIRKKHIV | DTKQQEHVYS | EKRILEELCS | PFIVKLYRTF | KDNKYVYMLL | EACLGGELWS |
550 | 560 | 570 | 580 | 590 | 600 |
ILRDRGSFDE | PTSKFCVACV | TEAFDYLHRL | GIIYRDLKPE | NLILDAEGYL | KLVDFGFAKK |
610 | 620 | 630 | 640 | 650 | 660 |
IGSGQKTWTF | CGTPEYVAPE | VILNKGHDFS | VDFWSLGILV | YELLTGNPPF | SGVDQMMTYN |
670 | 680 | 690 | 700 | 710 | 720 |
LILKGIEKMD | FPRKITRRPE | DLIRRLCRQN | PTERLGNLKN | GINDIKKHRW | LNGFNWEGLK |
730 | 740 | 750 | 760 | ||
ARSLPSPLQR | ELKGPIDHSY | FDKYPPEKGM | PPDELSGWDK | DF |