Q0WNR6
Gene name |
ARID5 (At1g76510, F14G6.11) |
Protein name |
AT-rich interactive domain-containing protein 5 |
Names |
ARID domain-containing protein 5 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G76510 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q0WNR6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q0WNR6-F1 | Predicted | AlphaFoldDB |
29 variants for Q0WNR6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_1_28712453_T_A | 16 | T>S | No | 1000Genomes | |
| ENSVATH14484819 | 20 | V>A | No | 1000Genomes | |
| tmp_1_28712438_C_G | 21 | E>Q | No | 1000Genomes | |
| ENSVATH13819433 | 41 | P>S | No | 1000Genomes | |
| ENSVATH13819432 | 43 | D>Y | No | 1000Genomes | |
| ENSVATH05155528 | 44 | T>S | No | 1000Genomes | |
| ENSVATH05155527 | 52 | V>I | No | 1000Genomes | |
| ENSVATH14484818 | 57 | A>T | No | 1000Genomes | |
| ENSVATH05155526 | 90 | T>S | No | 1000Genomes | |
| ENSVATH13819431 | 91 | S>G | No | 1000Genomes | |
| tmp_1_28712204_T_C | 99 | T>A | No | 1000Genomes | |
| ENSVATH05155525 | 100 | L>F | No | 1000Genomes | |
| tmp_1_28712167_G_A | 111 | S>L | No | 1000Genomes | |
| ENSVATH14484817 | 114 | H>Y | No | 1000Genomes | |
| ENSVATH13819430 | 117 | E>Q | No | 1000Genomes | |
| ENSVATH05155524 | 118 | E>G | No | 1000Genomes | |
| tmp_1_28712125_G_T | 125 | T>K | No | 1000Genomes | |
| tmp_1_28712107_G_A | 131 | A>V | No | 1000Genomes | |
| ENSVATH13819429 | 158 | E>Q | No | 1000Genomes | |
| tmp_1_28711869_C_A | 165 | A>S | No | 1000Genomes | |
| ENSVATH14484800 | 267 | R>K | No | 1000Genomes | |
| tmp_1_28710350_G_A | 270 | A>V | No | 1000Genomes | |
| ENSVATH05155500 | 275 | M>V | No | 1000Genomes | |
| tmp_1_28710023_A_T | 322 | M>K | No | 1000Genomes | |
| ENSVATH13819412 | 325 | V>D | No | 1000Genomes | |
| ENSVATH13819413 | 325 | V>F | No | 1000Genomes | |
| tmp_1_28709687_G_A | 343 | P>L | No | 1000Genomes | |
| tmp_1_28709446_A_T | 362 | F>I | No | 1000Genomes | |
| tmp_1_28709009_G_C | 408 | P>R | No | 1000Genomes |
No associated diseases with Q0WNR6
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q99856 | ARID3A | AT-rich interactive domain-containing protein 3A | Homo sapiens (Human) | SS |
| Q8BM75 | Arid5b | AT-rich interactive domain-containing protein 5B | Mus musculus (Mouse) | PR |
| Q62431 | Arid3a | AT-rich interactive domain-containing protein 3A | Mus musculus (Mouse) | PR |
| O02326 | cfi-1 | AT-rich interactive domain-containing protein cfi-1 | Caenorhabditis elegans | PR |
| C0SUW7 | ARID6 | AT-rich interactive domain-containing protein 6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MMADTEMQEQ | DVPSGTKGVV | EEPSELEKDL | NSIERPKSPV | PEDTTHTLDS | DVHLSDAPIA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NQIEANEEVG | GQNSVDGRNG | DVDQSEKKIT | SDGGQEETTL | GESNPLKGDP | SSPHVPEESV |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KKWKTWLLSD | AEAREVDEAG | APQDQEAFIK | EVEAFNKENF | LEFKAPKFYG | QPLNCLKLWR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AVIKLGGYDV | VTTSKLWRQV | GESFHPPKTC | TTVSWTFRIF | YEKALLEYEK | HLRQNGELNL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| PGSASLPSSG | IEKEASSHQA | SGSGRTRRDA | AARAMQGWHS | QRLLGSGEVT | EPIVKEKGLN |
| 310 | 320 | 330 | 340 | 350 | 360 |
| STPKQKNLKN | IGVQKQKTTT | GMDLVFSHES | EKQSTAEVID | VGPPADWVKI | NVRETKDCFE |
| 370 | 380 | 390 | 400 | 410 | 420 |
| IFALVPGLLR | EEVRVQSDPA | GRLVIAGQPE | QLDNPWGITP | FKKVVNFPAR | IDPLHTSAVV |
| 430 | |||||
| SLHGRLFVRV | PFEQ |