Descriptions

PDE4D encodes a cAMP-specific 3',5'-cyclic phosphodiesterase 4D involved in the hydrolysis of cAMP and cGMP, which play important roles in many physiological processes. The autoinhibitory domain of PDE4D is located in the upstream conserved region 2 (UCR2) that inhibits PDE4D activity. Specifically, the α-helical NQVSE[F/Y]ISXTFLD sequence within UCR2 can fold across the catalytic pocket and thus control access to it. In addition, UCR1 can interact with UCR2 to regulate the activity of PDE4.

Autoinhibitory domains (AIDs)

Target domain

386-715 (3'5'-cyclic nucleotide phosphodiesterase, catalytic domain)

Relief mechanism

PTM

Assay

Mutagenesis experiment, Structural analysis

Target domain

386-715 (3'5'-cyclic nucleotide phosphodiesterase, catalytic domain)

Relief mechanism

PTM

Assay

Mutagenesis experiment, Structural analysis

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

110 structures for Q08499

Entry ID Method Resolution Chain Position Source
1E9K NMR - A - PDB
1MKD X-ray 290 A A/B/C/D/E/F/G/H/I/J/K/L 388-715 PDB
1OYN X-ray 200 A A/B/C/D 381-740 PDB
1PTW X-ray 230 A A/B/C/D 381-740 PDB
1Q9M X-ray 230 A A/B/C/D 381-740 PDB
1TB7 X-ray 163 A A/B 388-715 PDB
1TBB X-ray 160 A A/B 388-715 PDB
1XOM X-ray 155 A A/B 388-715 PDB
1XON X-ray 172 A A/B 388-715 PDB
1XOQ X-ray 183 A A/B 388-715 PDB
1XOR X-ray 154 A A/B 388-715 PDB
1Y2B X-ray 140 A A/B 388-715 PDB
1Y2C X-ray 167 A A/B 388-715 PDB
1Y2D X-ray 170 A A/B 388-715 PDB
1Y2E X-ray 210 A A/B 388-715 PDB
1Y2K X-ray 136 A A/B 388-715 PDB
1ZKN X-ray 210 A A/B/C/D 381-714 PDB
2FM0 X-ray 200 A A/B/C/D 381-741 PDB
2FM5 X-ray 203 A A/B/C/D 381-741 PDB
2PW3 X-ray 156 A A/B 388-714 PDB
2QYN X-ray 157 A A/B 388-715 PDB
3G4G X-ray 230 A PDB
3G4I X-ray 190 A A/B/C/D 380-753 PDB
3G4K X-ray 195 A A/B/C/D 380-753 PDB
3G4L X-ray 250 A A/B/C/D 380-753 PDB
3G58 X-ray 205 A A/B/C/D 380-753 PDB
3IAD X-ray 265 A PDB
3IAK X-ray 280 A A 388-715 PDB
3K4S X-ray 205 A A 388-715 PDB
3SL3 X-ray 210 A A/B/C/D 381-741 PDB
3SL4 X-ray 190 A A/B/C/D 381-741 PDB
3SL5 X-ray 265 A A/B/C/D 381-714 PDB
3SL6 X-ray 244 A A/B/C/D 381-741 PDB
3SL8 X-ray 260 A A/B/C/D 381-741 PDB
3V9B X-ray 210 A A/B/C/D 381-740 PDB
4OGB X-ray 203 A A/B/C/D 381-741 PDB
4W1O X-ray 220 A A/B/C/D 381-739 PDB
4WCU X-ray 235 A A/B/C/D 381-739 PDB
5K1I X-ray 261 A A/B/C/D/E/F/G/H 388-713 PDB
5K32 X-ray 199 A A/B 390-713 PDB
5LBO X-ray 225 A A/B/C/D 381-740 PDB
5TKB X-ray 216 A A/B/C/D 380-753 PDB
5WH5 X-ray 180 A A/B 388-714 PDB
5WH6 X-ray 160 A A/B 303-809 PDB
5WQA X-ray 230 A A/B 381-714 PDB
6AKR X-ray 233 A A/B/C/D 381-740 PDB
6BOJ X-ray 170 A PDB
6F6U X-ray 183 A A/B 380-714 PDB
6F8R X-ray 183 A A/B 380-714 PDB
6F8T X-ray 180 A A/B 380-714 PDB
6F8U X-ray 210 A A/B 380-714 PDB
6F8V X-ray 185 A A/B 380-714 PDB
6F8W X-ray 160 A A/B 380-714 PDB
6F8X X-ray 195 A A/B 380-715 PDB
6FDC X-ray 145 A A/B 380-714 PDB
6FDI X-ray 190 A A/B/C/D 381-740 PDB
6FE7 X-ray 200 A A/B/C/D 381-740 PDB
6FEB X-ray 193 A A/B 381-740 PDB
6FET X-ray 188 A A/B/C/D 381-740 PDB
6FT0 X-ray 210 A A/B/C/D 381-740 PDB
6FTA X-ray 234 A A/B/C/D 381-740 PDB
6FTW X-ray 216 A A/B/C/D 381-740 PDB
6FW3 X-ray 178 A A/B/C/D 381-740 PDB
6HWO X-ray 199 A A/B/C/D 381-740 PDB
6IAG X-ray 200 A A/B/C/D 381-740 PDB
6IBF X-ray 231 A A/B/C/D 381-740 PDB
6IM6 X-ray 170 A A/B 388-715 PDB
6IMB X-ray 155 A A/B 388-715 PDB
6IMD X-ray 150 A A/B 388-715 PDB
6IMI X-ray 146 A A/B 388-715 PDB
6IMO X-ray 155 A A/B 388-715 PDB
6IMR X-ray 150 A A/B 388-715 PDB
6IMT X-ray 148 A A/B 388-715 PDB
6IND X-ray 187 A A/B 388-715 PDB
6INK X-ray 170 A A/B 388-715 PDB
6INM X-ray 200 A A/B 388-715 PDB
6KJZ X-ray 220 A A/B 387-714 PDB
6KK0 X-ray 220 A A/B 388-713 PDB
6LRM X-ray 145 A A/B 388-715 PDB
6NJH X-ray 215 A PDB
6NJI X-ray 245 A PDB
6NJJ X-ray 230 A PDB
6RCW X-ray 208 A A/B/C/D 381-740 PDB
6ZBA X-ray 160 A AAA/BBB/CCC/DDD 381-738 PDB
7A8Q X-ray 224 A A/B/C/D 381-740 PDB
7A9V X-ray 217 A A/B/C/D 381-740 PDB
7AAG X-ray 179 A A/B/C/D 381-740 PDB
7AB9 X-ray 219 A A/B/C/D 381-740 PDB
7ABD X-ray 241 A A/B/C/D 381-740 PDB
7ABE X-ray 183 A A/B/C/D 381-740 PDB
7ABJ X-ray 211 A A/B/C/D 381-740 PDB
7AY6 X-ray 166 A A/B 380-714 PDB
7B9H X-ray 150 A A/B 380-714 PDB
7CBJ X-ray 150 A A/B 388-715 PDB
7CBQ X-ray 159 A A/B 388-715 PDB
7F2K X-ray 210 A A/B 303-809 PDB
7F2L X-ray 210 A A/B 303-809 PDB
7F2M X-ray 220 A A/B 303-809 PDB
7W4X X-ray 220 A A/B 380-751 PDB
7W4Y X-ray 210 A A/B 380-751 PDB
7XAA X-ray 210 A A/B 303-809 PDB
7XAB X-ray 200 A A/B 303-809 PDB
7XBB X-ray 210 A A/B 303-809 PDB
7YQF X-ray 154 A A/B 388-715 PDB
7YSX X-ray 165 A A/B 388-715 PDB
8K4C X-ray 210 A A/B 388-715 PDB
8K4H X-ray 195 A A/B 388-715 PDB
8W4Q X-ray 155 A A/B 388-715 PDB
8W4R X-ray 137 A A/B 388-715 PDB
AF-Q08499-F1 Predicted AlphaFoldDB

433 variants for Q08499

Variant ID(s) Position Change Description Diseaes Association Provenance
rs372946517
RCV000388985
CA3276684
42 P>Q Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinGen
ClinVar
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
CA128850
rs397514466
RCV000022937
VAR_068242
190 S>A Acrodysostosis 2, with or without hormone resistance (acrdys2) ACRDYS2 Acrodysostosis 2 with or without hormone resistance [Ensembl, UniProt, ClinVar] Yes ClinGen
ClinVar
UniProt
Ensembl
dbSNP
rs1751144333
RCV001262446
190 S>F Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinVar
dbSNP
RCV000022935
rs397514464
CA128846
VAR_068243
225 P>T Acrodysostosis 2, with or without hormone resistance (acrdys2) ACRDYS2 Acrodysostosis 2 with or without hormone resistance [Ensembl, UniProt, ClinVar] Yes ClinGen
ClinVar
UniProt
Ensembl
dbSNP
CA150719
RCV000087310
rs397514465
226 F>C Acrodysostosis 2, with or without hormone resistance (acrdys2) Acrodysostosis 2 with or without hormone resistance [Ensembl, ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
CA128848
RCV000022936
rs397514465
VAR_068244
226 F>S Acrodysostosis 2, with or without hormone resistance (acrdys2) ACRDYS2 Acrodysostosis 2 with or without hormone resistance [Ensembl, UniProt, ClinVar] Yes ClinGen
ClinVar
UniProt
Ensembl
dbSNP
rs397514468
VAR_069449
CA128854
RCV000022939
228 Q>E Acrodysostosis 2, with or without hormone resistance (acrdys2) ACRDYS2 Acrodysostosis 2 with or without hormone resistance [Ensembl, UniProt, ClinVar] Yes ClinGen
ClinVar
UniProt
Ensembl
dbSNP
RCV001152150
rs749222606
CA3276326
261 P>T Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
rs780848487
RCV001152149
CA3276321
265 K>T Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
VAR_069451
CA130730
rs397515433
RCV000033154
304 A>V Acrodysostosis 2, with or without hormone resistance (acrdys2) ACRDYS2 Acrodysostosis 2 with or without hormone resistance [Ensembl, UniProt, ClinVar] Yes ClinGen
ClinVar
UniProt
Ensembl
dbSNP
rs750666346
RCV001157620
CA3276109
418 R>W Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
RCV001155919
rs1747740719
425 H>P Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinVar
dbSNP
RCV001155918
rs1747451452
445 I>V Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinVar
dbSNP
RCV000984667
COSM1194817
COSM1194819
COSM1194821
COSM1194818
COSM1194816
rs1580132131
CA359817187
COSM1194820
COSM1194822
447 Y>H lung Esophageal atresia [Cosmic, ClinVar] Yes ClinGen
cosmic curated
ClinVar
Ensembl
dbSNP
rs1379060456
CA359816864
RCV001199197
492 I>M Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinGen
ClinVar
TOPMed
dbSNP
RCV001155917
CA3276037
rs757175453
RCV001859017
526 N>S Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
CA128852
VAR_068245
rs397514467
RCV000022938
587 T>P Acrodysostosis 2, with or without hormone resistance (acrdys2) ACRDYS2 Acrodysostosis 2 with or without hormone resistance [Ensembl, UniProt, ClinVar] Yes ClinGen
ClinVar
UniProt
Ensembl
dbSNP
RCV000585454
rs1554033934
RCV000504451
CA359814822
588 M>V Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
rs1743815247
RCV001270705
592 K>Q Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinVar
dbSNP
rs761294824
CA3276011
RCV001153313
602 L>F Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
RCV000022940
rs387906744
CA128856
651 E>A Acrodysostosis 2, with or without hormone resistance (acrdys2) Acrodysostosis 2 with or without hormone resistance [Ensembl, ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
CA128858
VAR_069454
RCV000022941
rs397514469
673 G>D Acrodysostosis 2, with or without hormone resistance (acrdys2) ACRDYS2 Acrodysostosis 2 with or without hormone resistance [Ensembl, UniProt, ClinVar] Yes ClinGen
ClinVar
UniProt
Ensembl
dbSNP
VAR_069455
rs587777188
RCV001854509
CA150721
RCV000087311
678 I>T Acrodysostosis 2, with or without hormone resistance (acrdys2) ACRDYS2 Acrodysostosis 2 with or without hormone resistance [Ensembl, UniProt, ClinVar] Yes ClinGen
ClinVar
UniProt
Ensembl
dbSNP
rs1743358464
RCV001270704
684 E>G Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinVar
dbSNP
rs759832724
CA3275924
RCV000714845
727 R>W Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
CA359812591
rs1290453118
RCV001153312
RCV001882476
754 S>G Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinGen
ClinVar
TOPMed
dbSNP
gnomAD
rs1743287865
RCV001153311
785 E>D Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinVar
dbSNP
RCV001152048
rs1186516969
789 V>E Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinVar
dbSNP
RCV001152047
rs747415773
CA3275892
801 V>I Acrodysostosis 2 with or without hormone resistance [ClinVar] Yes ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
CA359933294
rs1248858612
3 A>T No ClinGen
gnomAD
rs1044783142
CA359933283
4 E>D No ClinGen
TOPMed
gnomAD
CA359933279
rs1211297841
5 G>C No ClinGen
TOPMed
gnomAD
CA359933277
rs1490334173
5 G>D No ClinGen
gnomAD
rs754644349
CA359933252
9 P>A No ClinGen
ExAC
gnomAD
rs754644349
CA3276687
9 P>S No ClinGen
ExAC
gnomAD
rs1271829629
CA359933246
10 A>S No ClinGen
gnomAD
rs1279805665
CA359933243
10 A>V No ClinGen
TOPMed
CA359933242
rs1212487777
11 R>G No ClinGen
gnomAD
CA359933240
rs1312350146
11 R>Q No ClinGen
TOPMed
CA3276686
rs746187639
13 G>R No ClinGen
ExAC
gnomAD
CA359933219
rs781502665
14 S>R No ClinGen
ExAC
TOPMed
gnomAD
rs1225337341
CA359933226
14 S>R No ClinGen
TOPMed
gnomAD
rs1343568016
CA359933217
15 G>R No ClinGen
gnomAD
CA359933208
rs1301323490
16 E>G No ClinGen
gnomAD
CA359933200
rs1328341402
17 G>V No ClinGen
gnomAD
rs967054471
CA119327237
18 S>C No ClinGen
TOPMed
gnomAD
CA359933195
rs1371296025
18 S>T No ClinGen
gnomAD
rs1408496387
CA359933191
19 D>N No ClinGen
gnomAD
rs1173533774
CA359933177
20 S>R No ClinGen
gnomAD
rs1427632092
CA359933179
20 S>T No ClinGen
gnomAD
CA119327235
rs1023884504
21 A>T No ClinGen
TOPMed
rs1480373658
CA359933167
22 G>A No ClinGen
TOPMed
gnomAD
CA359933165
rs1480373658
22 G>D No ClinGen
TOPMed
gnomAD
rs1014928103
CA119327234
25 T>A No ClinGen
TOPMed
gnomAD
CA119327228
rs866360475
28 A>V No ClinGen
TOPMed
gnomAD
rs1348597968
CA359933123
COSM1069193
29 P>L endometrium [Cosmic] No ClinGen
cosmic curated
TOPMed
CA359933118
rs1443798737
30 K>R No ClinGen
TOPMed
gnomAD
CA359933092
rs1275744663
33 W>* No ClinGen
TOPMed
rs995039096
CA119327226
35 H>Q No ClinGen
TOPMed
gnomAD
CA359933078
rs995039096
35 H>Q No ClinGen
TOPMed
gnomAD
CA359933075
rs1202827142
36 E>K No ClinGen
TOPMed
gnomAD
CA119327224
rs899317244
38 H>R No ClinGen
TOPMed
gnomAD
rs372946517
CA359933026
42 P>L No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA359933027
rs372946517
42 P>R No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs1279095632
CA359933017
44 R>P No ClinGen
TOPMed
gnomAD
rs1279095632
CA359933015
44 R>Q No ClinGen
TOPMed
gnomAD
rs375819387
CA119327220
46 P>S No ClinGen
ESP
TOPMed
gnomAD
CA359932995
rs1469593065
47 Q>H No ClinGen
TOPMed
gnomAD
rs1337747427
CA359932997
47 Q>R No ClinGen
gnomAD
rs911899480
CA119327218
49 R>C No ClinGen
TOPMed
gnomAD
CA359932983
rs1162000110
49 R>H No ClinGen
TOPMed
gnomAD
rs1162000110
CA359932982
49 R>P No ClinGen
TOPMed
gnomAD
CA119327216
rs572195775
51 L>P No ClinGen
1000Genomes
TOPMed
gnomAD
CA359932952
rs1473550661
54 H>R No ClinGen
gnomAD
CA119327214
rs1039169116
56 H>P No ClinGen
Ensembl
rs1237714125
CA359932926
58 P>S No ClinGen
TOPMed
gnomAD
CA359932921
rs1373208779
59 P>A No ClinGen
TOPMed
gnomAD
CA119327212
rs933916686
59 P>L No ClinGen
TOPMed
CA359932918
rs933916686
59 P>R No ClinGen
TOPMed
CA3276682
rs764578237
60 P>L No ClinGen
ExAC
gnomAD
rs1411722004
CA359932898
63 P>S No ClinGen
TOPMed
rs1411722004
CA359932899
63 P>T No ClinGen
TOPMed
rs1269857478
CA359932889
64 S>L No ClinGen
gnomAD
rs1316277460
CA359932872
67 P>S No ClinGen
gnomAD
rs1316277460
CA359932874
67 P>T No ClinGen
gnomAD
CA3276681
rs758440775
70 Q>K No ClinGen
ExAC
gnomAD
rs921170011
CA119327207
70 Q>R No ClinGen
TOPMed
CA3276680
rs752736720
72 P>L No ClinGen
ExAC
gnomAD
CA359932836
rs752736720
72 P>R No ClinGen
ExAC
gnomAD
CA359932833
rs1408359710
73 L>P No ClinGen
TOPMed
rs1349445879
CA359932811
76 P>L No ClinGen
TOPMed
CA119327198
rs925784488
79 P>H No ClinGen
TOPMed
gnomAD
rs765507833
CA3276679
79 P>S No ClinGen
ExAC
TOPMed
gnomAD
CA3276676
rs777036225
80 P>L No ClinGen
ExAC
gnomAD
rs777036225
CA359932792
80 P>R No ClinGen
ExAC
gnomAD
rs759869715
CA3276677
80 P>S No ClinGen
ExAC
gnomAD
RCV000519992
rs1184611767
81 L>missing No ClinVar
dbSNP
rs1232706958
CA359932780
82 P>L No ClinGen
gnomAD
CA359932777
rs1472496774
83 P>S No ClinGen
TOPMed
rs967065693
CA119327189
84 P>T No ClinGen
TOPMed
CA359932768
rs1023936942
85 P>A No ClinGen
TOPMed
gnomAD
CA119327187
rs1023936942
85 P>S No ClinGen
TOPMed
gnomAD
rs1249600634
CA359932744
89 G>R No ClinGen
gnomAD
rs1412182087
CA359932740
89 G>V No ClinGen
gnomAD
CA3276673
rs558790690
90 A>T No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA359932727
rs773134882
92 R>C No ClinGen
ExAC
gnomAD
rs773134882
CA3276672
92 R>G No ClinGen
ExAC
gnomAD
CA119327179
rs1034636680
93 G>S No ClinGen
TOPMed
gnomAD
CA359932716
rs1323581778
94 R>C No ClinGen
gnomAD
CA119327177
rs372577747
94 R>H No ClinGen
TOPMed
gnomAD
CA359932705
rs1357564218
96 A>S No ClinGen
TOPMed
gnomAD
CA359932703
rs1357564218
96 A>T No ClinGen
TOPMed
gnomAD
rs1207096418
CA359932694
97 S>L No ClinGen
TOPMed
CA359932695
rs1207096418
97 S>W No ClinGen
TOPMed
CA359932682
rs1287595740
99 G>E No ClinGen
gnomAD
rs1163623992
CA359932685
99 G>R No ClinGen
gnomAD
rs1439301442
CA359932679
100 A>T No ClinGen
TOPMed
gnomAD
rs1442096481
CA359932668
101 T>I No ClinGen
TOPMed
CA3276669
rs773877840
102 G>D No ClinGen
ExAC
TOPMed
gnomAD
rs1561828391
CA359932667
102 G>S No ClinGen
Ensembl
rs1422320736
CA359932658
103 R>H No ClinGen
gnomAD
CA359932646
rs1581631183
105 R>P No ClinGen
Ensembl
CA359932640
rs1448134331
106 H>R No ClinGen
TOPMed
CA359932611
rs1561828324
110 S>L No ClinGen
Ensembl
CA359932590
rs370095823
113 E>D No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA359932580
rs1488775661
115 Y>H No ClinGen
gnomAD
rs1221878559
CA359932560
118 C>R No ClinGen
gnomAD
rs1277006573
CA359932548
119 R>L No ClinGen
TOPMed
gnomAD
rs1277006573
CA359932549
119 R>P No ClinGen
TOPMed
gnomAD
rs747343167
CA3276664
120 A>T No ClinGen
ExAC
gnomAD
CA359932543
rs1334169585
120 A>V No ClinGen
TOPMed
CA359932537
rs1293952608
121 M>R No ClinGen
gnomAD
rs1307278112
CA359932541
121 M>V No ClinGen
gnomAD
CA3276663
rs778288029
122 D>G No ClinGen
ExAC
gnomAD
rs1384356342
CA359932524
123 R>C No ClinGen
TOPMed
CA359932522
rs1231008532
123 R>H No ClinGen
gnomAD
rs917710480
CA119327163
127 A>V No ClinGen
Ensembl
rs1051787358
CA119327160
129 E>A No ClinGen
TOPMed
gnomAD
rs752782297
CA3276661
131 G>A No ClinGen
ExAC
gnomAD
rs932027290
CA119327158
131 G>R No ClinGen
TOPMed
gnomAD
rs1480701345
CA359932472
132 H>N No ClinGen
gnomAD
rs866796539
CA359932464
133 R>G No ClinGen
gnomAD
rs866796539
CA119327154
133 R>W No ClinGen
gnomAD
rs372484896
CA119327152
134 P>S No ClinGen
ESP
TOPMed
gnomAD
CA359932438
rs1196589888
137 K>N No ClinGen
gnomAD
rs1581630366
CA359932422
140 R>G No ClinGen
Ensembl
CA119327148
rs866407148
140 R>M No ClinGen
Ensembl
rs1039661325
CA119327146
141 M>K No ClinGen
TOPMed
rs754107598
CA3276658
142 S>P No ClinGen
ExAC
TOPMed
gnomAD
rs766711112
CA359932378
146 S>L No ClinGen
ExAC
TOPMed
gnomAD
CA359932380
rs1212712022
146 S>P No ClinGen
gnomAD
rs766711112
CA3276657
146 S>W No ClinGen
ExAC
TOPMed
gnomAD
CA119327141
rs867397273
148 Q>R No ClinGen
Ensembl
CA119327138
rs867065202
149 G>* No ClinGen
Ensembl
rs973999806
CA119327136
152 R>H No ClinGen
TOPMed
gnomAD
CA359932340
rs973999806
152 R>L No ClinGen
TOPMed
gnomAD
rs773745652
CA3276422
159 T>I No ClinGen
ExAC
gnomAD
CA3276421
rs772608117
160 S>C No ClinGen
ExAC
gnomAD
CA3276419
rs562952667
161 A>V No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs780090398
CA3276416
163 R>Q No ClinGen
ExAC
TOPMed
gnomAD
COSM1069189
COSM1069186
COSM1069188
COSM1069187
COSM1595448
COSM1595447
COSM1069190
rs749395945
CA3276417
163 R>W endometrium [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
CA359931059
rs1363477204
164 S>G No ClinGen
TOPMed
CA3276415
rs756389970
165 P>S No ClinGen
ExAC
TOPMed
gnomAD
rs1168647282
CA359931041
166 L>F No ClinGen
TOPMed
gnomAD
rs1303629213
CA359931044
166 L>S No ClinGen
TOPMed
CA3276414
rs372954941
167 D>Y No ClinGen
ESP
ExAC
gnomAD
CA359931032
rs780941133
168 P>A No ClinGen
ExAC
TOPMed
gnomAD
rs1190895236
CA359931029
168 P>L No ClinGen
gnomAD
rs780941133
CA3276413
168 P>S No ClinGen
ExAC
TOPMed
gnomAD
rs1561730762
CA359931003
172 P>S No ClinGen
Ensembl
CA3276411
rs764024044
175 G>R No ClinGen
ExAC
TOPMed
gnomAD
CA3276410
rs764024044
175 G>R No ClinGen
ExAC
TOPMed
gnomAD
COSM1726177
COSM1726178
rs757789550
COSM1726174
CA3276409
COSM1726175
COSM1726179
COSM1726173
COSM1726176
177 I>V liver [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
CA359930933
rs1312305936
183 V>A No ClinGen
gnomAD
CA3276408
rs375081915
183 V>I No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1245712072
CA359930924
184 H>Q No ClinGen
TOPMed
CA3276407
rs764761417
185 S>G No ClinGen
ExAC
gnomAD
rs759197521
CA3276406
185 S>N No ClinGen
ExAC
TOPMed
gnomAD
CA359930917
rs1375168640
186 Q>K No ClinGen
gnomAD
CA119158605
rs765474542
187 R>Q No ClinGen
Ensembl
rs1331825221
CA359930904
188 R>W No ClinGen
gnomAD
CA359930885
rs1561730426
RCV000762145
191 F>V No ClinGen
ClinVar
Ensembl
dbSNP
RCV001268137
rs1751141961
192 L>P No ClinVar
dbSNP
COSM1069184
COSM1595450
rs1488614653
COSM1069181
COSM1595449
COSM1069185
CA359930865
COSM1069183
COSM1069182
194 R>* endometrium [Cosmic] No ClinGen
cosmic curated
gnomAD
CA359930860
rs1249867223
195 S>P No ClinGen
TOPMed
COSM1176958
COSM1176961
COSM1176957
COSM1176962
rs1010105315
COSM1176960
CA359930855
COSM1176963
COSM1176959
196 D>N endometrium [Cosmic] No ClinGen
cosmic curated
TOPMed
gnomAD
CA119158603
rs1010105315
196 D>Y No ClinGen
TOPMed
gnomAD
rs1175561902
CA359930827
199 Y>F No ClinGen
gnomAD
rs762270122
CA3276402
201 L>I No ClinGen
ExAC
TOPMed
gnomAD
CA119158602
rs895770261
206 M>T No ClinGen
TOPMed
CA119158601
rs926956807
208 R>Q No ClinGen
Ensembl
CA3276398
rs775608955
208 R>W No ClinGen
ExAC
TOPMed
gnomAD
CA359930636
rs1581425404
213 A>V No ClinGen
Ensembl
CA119158600
rs1036024674
214 S>C No ClinGen
TOPMed
COSM449944
COSM449942
CA359930598
COSM449943
rs1236617747
COSM1486883
COSM449941
COSM1486884
COSM449940
216 I>T breast [Cosmic] No ClinGen
cosmic curated
TOPMed
gnomAD
CA3276378
rs763492345
218 G>R No ClinGen
ExAC
gnomAD
rs202012782
CA119155946
227 A>D No ClinGen
1000Genomes
CA3276356
rs776726294
234 R>* No ClinGen
ExAC
gnomAD
COSM1069178
COSM1069176
COSM1595451
rs766490621
COSM1595452
CA3276355
COSM1069180
COSM1069179
COSM1069177
234 R>Q endometrium [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
rs1387701505
CA359930414
236 V>I No ClinGen
gnomAD
COSM1595454
COSM1069171
rs773367832
COSM1069174
COSM1069172
COSM1069175
COSM1595453
COSM1069173
CA3276353
237 R>Q endometrium [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
CA359930402
rs1433192550
238 N>Y No ClinGen
gnomAD
CA359930323
rs1202749645
249 R>* No ClinGen
Ensembl
CA3276352
rs771830270
249 R>Q No ClinGen
ExAC
TOPMed
gnomAD
rs747906766
CA3276351
250 A>T No ClinGen
ExAC
TOPMed
gnomAD
CA3276350
rs774291005
253 K>Q No ClinGen
ExAC
gnomAD
rs1561654257
CA359930299
253 K>T No ClinGen
Ensembl
CA359930263
rs1237487684
256 P>L No ClinGen
gnomAD
rs773983117
CA359930266
256 P>S No ClinGen
ExAC
TOPMed
gnomAD
rs773983117
CA3276327
256 P>T No ClinGen
ExAC
TOPMed
gnomAD
CA359930256
rs1324756013
257 M>I No ClinGen
TOPMed
rs1347975754
CA359930252
258 C>R No ClinGen
TOPMed
CA3276325
rs749222606
261 P>S No ClinGen
ExAC
TOPMed
gnomAD
CA3276324
rs377740085
262 S>F No ClinGen
ESP
ExAC
gnomAD
CA3276323
rs769361266
263 I>N No ClinGen
ExAC
gnomAD
CA3276322
rs372039525
264 N>S No ClinGen
ExAC
TOPMed
gnomAD
CA359930187
rs1242734289
268 I>V No ClinGen
gnomAD
rs1398425084
CA359930178
269 T>K No ClinGen
gnomAD
CA3276262
rs767060983
278 S>N No ClinGen
ExAC
gnomAD
CA359818402
rs1213097056
279 E>A No ClinGen
gnomAD
CA359818399
rs1251062427
279 E>D No ClinGen
gnomAD
rs1455341183
CA359818405
279 E>K No ClinGen
TOPMed
CA359818394
rs1157727798
280 T>I No ClinGen
TOPMed
CA16604814
RCV000425291
rs1057520731
294 L>R No ClinGen
ClinVar
Ensembl
dbSNP
rs1193514797
CA359818089
322 M>V No ClinGen
gnomAD
CA359818070
rs774783517
324 R>L No ClinGen
ExAC
TOPMed
gnomAD
CA3276180
rs774783517
324 R>Q No ClinGen
ExAC
TOPMed
gnomAD
CA118799784
rs1048094273
332 F>L No ClinGen
Ensembl
CA359817984
RCV000518901
rs1554039692
337 F>C No ClinGen
ClinVar
Ensembl
dbSNP
rs1405174140
CA359817944
341 Q>E No ClinGen
TOPMed
gnomAD
CA3276164
rs754651326
342 H>R No ClinGen
ExAC
gnomAD
rs753598558
CA3276163
343 E>D No ClinGen
ExAC
TOPMed
gnomAD
CA118798444
rs1036445401
347 P>L No ClinGen
TOPMed
CA3276161
rs757564654
348 S>P No ClinGen
ExAC
gnomAD
CA3276160
rs752044490
350 T>I No ClinGen
ExAC
gnomAD
CA3276157
rs370618257
351 Q>H No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA3276159
rs374330851
351 Q>R No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA359817810
rs1304984879
360 P>T No ClinGen
gnomAD
rs899992246
CA118798380
361 M>I No ClinGen
Ensembl
CA359817792
rs1356305921
362 S>Y No ClinGen
gnomAD
rs1413308053
CA359817775
365 S>R No ClinGen
gnomAD
CA3276153
rs770694049
368 K>N No ClinGen
ExAC
gnomAD
CA118798330
rs561249844
371 M>L No ClinGen
Ensembl
CA3276151
rs746795466
374 S>C No ClinGen
ExAC
gnomAD
CA3276148
rs748140890
382 P>A No ClinGen
ExAC
gnomAD
rs1231636922
CA359817649
383 R>K No ClinGen
TOPMed
CA3276146
rs754598492
387 K>Q No ClinGen
ExAC
gnomAD
CA359817622
rs1561253638
387 K>T No ClinGen
Ensembl
CA359817613
rs1262205626
388 T>S No ClinGen
gnomAD
CA3276145
rs748880582
389 E>D No ClinGen
ExAC
TOPMed
gnomAD
rs1264970791
CA359817611
389 E>K No ClinGen
TOPMed
CA3276144
rs372918737
390 Q>E No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA3276143
rs757591581
391 E>D No ClinGen
ExAC
TOPMed
gnomAD
rs1279634985
CA359817586
392 D>G No ClinGen
gnomAD
rs1208242751
CA359817523
399 E>A No ClinGen
gnomAD
CA359817512
rs769291366
400 D>E No ClinGen
ExAC
gnomAD
rs552984282
CA118797210
406 L>V No ClinGen
1000Genomes
rs777941503
CA359817434
411 I>M No ClinGen
ExAC
TOPMed
gnomAD
CA3276115
rs758765275
412 A>G No ClinGen
ExAC
gnomAD
CA3276112
rs755025717
416 G>S No ClinGen
ExAC
gnomAD
CA3276111
rs376373740
416 G>V No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs766508184
CA3276110
417 N>S No ClinGen
ExAC
TOPMed
gnomAD
rs1396670027
CA359817395
418 R>Q No ClinGen
gnomAD
rs1006783426
CA118797115
423 I>T No ClinGen
TOPMed
rs1251121956
CA359817352
425 H>Y No ClinGen
gnomAD
rs1196836267
CA359817319
429 Q>R No ClinGen
TOPMed
gnomAD
rs1350718408
CA359817302
430 E>Q No ClinGen
gnomAD
rs767902478
CA3276085
431 R>Q No ClinGen
ExAC
TOPMed
gnomAD
COSM449934
COSM449931
COSM449930
rs1278470168
COSM449932
COSM1486880
COSM449933
COSM1486879
CA359817294
431 R>W breast [Cosmic] No ClinGen
cosmic curated
gnomAD
CA3276084
rs761671224
436 T>R No ClinGen
ExAC
TOPMed
gnomAD
rs1402900056
CA359817255
437 F>L No ClinGen
TOPMed
CA3276083
rs751360815
439 I>M No ClinGen
ExAC
gnomAD
CA359817219
rs1357216727
442 D>G No ClinGen
TOPMed
gnomAD
CA359817217
rs1357216727
442 D>V No ClinGen
TOPMed
gnomAD
CA118796031
rs913974941
452 E>K No ClinGen
TOPMed
rs970290170
CA118796020
456 H>R No ClinGen
Ensembl
CA359817110
rs1580132001
457 A>V No ClinGen
Ensembl
rs992592300
CA118796016
458 D>H No ClinGen
TOPMed
gnomAD
rs528098299
CA3276078
460 A>V No ClinGen
1000Genomes
ExAC
gnomAD
rs1188939348
CA359817090
461 Y>H No ClinGen
gnomAD
CA118795998
rs530605673
464 N>H No ClinGen
Ensembl
rs1352779128
CA359817063
464 N>K No ClinGen
TOPMed
CA3276077
rs367669132
464 N>S No ClinGen
ESP
ExAC
gnomAD
CA359817057
rs1207918895
465 I>T No ClinGen
TOPMed
CA359817026
rs1290773788
470 V>I No ClinGen
TOPMed
CA3276075
rs746692609
476 V>M No ClinGen
ExAC
gnomAD
rs1293451884
CA359816958
480 T>I No ClinGen
gnomAD
CA359816936
rs1380798731
484 E>* No ClinGen
Ensembl
CA118794937
rs79055937
490 L>F No ClinGen
Ensembl
CA359816884
rs1348357236
490 L>M No ClinGen
gnomAD
rs1368076095
CA359816846
495 A>V No ClinGen
TOPMed
gnomAD
rs904055256
CA118794925
496 I>T No ClinGen
TOPMed
gnomAD
rs1001030257
CA118794935
496 I>V No ClinGen
TOPMed
gnomAD
rs1254220543
CA359816827
498 A>V No ClinGen
gnomAD
CA3276060
rs758935869
499 S>G No ClinGen
ExAC
gnomAD
rs1246619120
CA359816807
501 I>M No ClinGen
TOPMed
CA359816812
rs1414958981
501 I>V No ClinGen
gnomAD
CA3276059
rs776076740
504 V>I No ClinGen
ExAC
gnomAD
CA359816783
rs1204783862
505 D>G No ClinGen
gnomAD
CA118794893
rs867615283
505 D>Y No ClinGen
Ensembl
CA359816776
rs1249227526
506 H>Y No ClinGen
TOPMed
rs1195894502
CA359816758
509 V>M No ClinGen
TOPMed
rs17853590
CA118794866
510 S>F No ClinGen
ExAC
rs17853590
CA3276057
510 S>Y No ClinGen
ExAC
rs1272237963
CA359816744
511 N>S No ClinGen
gnomAD
CA118794857
rs1016072268
512 Q>P No ClinGen
TOPMed
rs1386666345
CA359815795
524 M>R No ClinGen
TOPMed
CA359815666
rs1561216352
533 N>S No ClinGen
Ensembl
CA3276033
rs770069803
538 V>L No ClinGen
ExAC
gnomAD
CA118785990
rs1013533312
544 Q>L No ClinGen
TOPMed
rs1238747360
CA359815435
549 D>N No ClinGen
TOPMed
CA118785985
rs768650775
557 K>R No ClinGen
Ensembl
CA3276029
rs747133328
565 M>I No ClinGen
ExAC
gnomAD
rs777826248
CA3276028
566 V>I No ClinGen
ExAC
gnomAD
CA118785974
rs77776824
567 I>S No ClinGen
Ensembl
CA3276027
rs772296200
569 I>V No ClinGen
ExAC
TOPMed
gnomAD
rs1309634299
CA359814932
579 M>I No ClinGen
gnomAD
rs1554033942
RCV000658139
CA359814880
583 A>V No ClinGen
ClinVar
Ensembl
dbSNP
CA359814853
rs1435057344
585 L>F No ClinGen
gnomAD
CA359814694
rs1169604180
596 S>R No ClinGen
TOPMed
rs1441082063
CA359814664
599 V>I No ClinGen
TOPMed
gnomAD
CA118785386
rs866625704
600 L>F No ClinGen
Ensembl
CA359814619
rs1294608194
603 D>N No ClinGen
TOPMed
CA359814599
RCV000658017
rs1554033904
605 Y>C No ClinGen
ClinVar
Ensembl
dbSNP
CA359814589
COSM1069149
COSM1595461
COSM1069150
rs1463279737
COSM1069148
COSM1069146
COSM1069147
COSM1595462
607 D>N endometrium [Cosmic] No ClinGen
cosmic curated
gnomAD
rs1373455491
CA359814560
610 Q>E No ClinGen
gnomAD
CA359814386
rs1482282108
614 N>D No ClinGen
gnomAD
CA3275973
rs535640930
615 M>V No ClinGen
1000Genomes
ExAC
gnomAD
CA3275972
rs767626308
617 H>R No ClinGen
ExAC
gnomAD
CA359814329
rs1272540003
618 C>S No ClinGen
gnomAD
CA359814311
rs1313607193
619 A>T No ClinGen
TOPMed
CA359814275
rs1350715292
622 S>G No ClinGen
gnomAD
CA359814255
rs1580019966
623 N>T No ClinGen
Ensembl
rs1023537907
CA118784716
628 L>F No ClinGen
Ensembl
CA118784714
rs77167781
628 L>P No ClinGen
Ensembl
rs375852911
CA118784691
629 Q>R No ClinGen
ESP
TOPMed
rs1407691506
CA359814201
630 L>M No ClinGen
gnomAD
rs1580019711
CA359814185
631 Y>S No ClinGen
Ensembl
CA3275970
rs374011584
632 R>C No ClinGen
ESP
ExAC
gnomAD
COSM3828251
COSM3828249
CA359814174
COSM3828252
rs1286578613
COSM3828245
COSM3828247
COSM3828246
COSM3828250
COSM3828248
632 R>H breast [Cosmic] No ClinGen
cosmic curated
gnomAD
CA359814161
rs1313358018
633 Q>R No ClinGen
gnomAD
COSM1486876
COSM267150
COSM267153
CA118784677
rs926391290
COSM267152
COSM449924
COSM1486875
COSM267151
635 T>M large_intestine breast [Cosmic] No ClinGen
cosmic curated
TOPMed
gnomAD
rs369556531
CA118784669
637 R>Q No ClinGen
ESP
CA359814102
rs775209507
637 R>W No ClinGen
ExAC
gnomAD
CA3275966
rs769583461
638 I>M No ClinGen
ExAC
gnomAD
CA3275965
rs376541855
639 M>I No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA359814071
rs1412892900
639 M>T No ClinGen
TOPMed
gnomAD
CA3275963
rs371950648
644 R>C No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA3275962
rs753680481
644 R>H No ClinGen
ExAC
TOPMed
gnomAD
rs777455204
CA3275961
645 Q>R No ClinGen
ExAC
gnomAD
rs1157136199
CA359813945
648 R>* No ClinGen
TOPMed
rs941039861
CA118784636
648 R>Q No ClinGen
TOPMed
rs1580018856
CA359813911
651 E>Q No ClinGen
Ensembl
CA359813905
rs1277191501
652 R>C No ClinGen
gnomAD
CA359813897
rs1161354400
653 G>C No ClinGen
TOPMed
COSM1634275
COSM1634276
COSM1634278
rs1392211986
COSM1634277
CA359813892
COSM1634280
COSM1634281
COSM1634279
654 M>V liver [Cosmic] No ClinGen
cosmic curated
TOPMed
rs1388793262
CA359813877
655 E>D No ClinGen
gnomAD
rs1268462480
CA359813826
662 K>R No ClinGen
Ensembl
CA359813820
rs1267030767
663 H>N No ClinGen
gnomAD
CA359813809
rs1284551086
664 N>K No ClinGen
gnomAD
rs752409059
CA3275959
664 N>S No ClinGen
ExAC
TOPMed
gnomAD
rs371593645
CA3275957
667 V>M No ClinGen
ESP
ExAC
gnomAD
CA118784608
rs982682220
669 K>E No ClinGen
TOPMed
gnomAD
rs1199841180
CA359813676
674 F>L No ClinGen
gnomAD
RCV000519495
rs1554033304
CA359813632
677 Y>D No ClinGen
ClinVar
Ensembl
dbSNP
rs746987110
CA3275939
679 V>A No ClinGen
ExAC
TOPMed
gnomAD
rs777359745
CA3275938
682 L>F No ClinGen
ExAC
gnomAD
CA359813547
rs1342756183
685 T>A No ClinGen
TOPMed
gnomAD
rs747795129
CA3275936
689 L>H No ClinGen
ExAC
gnomAD
rs192644692
CA3275934
690 V>I No ClinGen
1000Genomes
ExAC
gnomAD
CA359813420
rs1450600452
694 A>T No ClinGen
gnomAD
rs781640099
CA3275932
694 A>V No ClinGen
ExAC
gnomAD
CA118784077
rs1026421522
695 Q>K No ClinGen
Ensembl
CA3275931
rs757650454
696 D>V No ClinGen
ExAC
gnomAD
CA359813344
rs1246873572
700 T>A No ClinGen
gnomAD
rs1212267444
CA359813274
705 R>C No ClinGen
Ensembl
rs764157419
CA3275929
710 S>N No ClinGen
ExAC
gnomAD
rs1161941860
CA359813061
720 P>S No ClinGen
TOPMed
CA359813050
rs1312356137
721 D>H No ClinGen
Ensembl
CA3275923
rs769178419
727 R>Q No ClinGen
ExAC
TOPMed
gnomAD
CA3275921
rs760459130
728 Q>H No ClinGen
ExAC
gnomAD
CA359812899
rs1348396215
731 T>I No ClinGen
gnomAD
CA359812875
rs1310211689
733 K>T No ClinGen
gnomAD
CA359812830
rs1409377328
736 F>L No ClinGen
TOPMed
rs1289089427
CA359812816
737 E>K No ClinGen
TOPMed
CA3275919
rs771691597
739 T>I No ClinGen
ExAC
gnomAD
rs1434350907
CA359812762
741 E>K No ClinGen
gnomAD
COSM1486873
COSM449920
COSM449921
COSM449923
COSM449922
COSM449919
rs1434350907
CA359812760
COSM1486874
741 E>Q breast [Cosmic] No ClinGen
cosmic curated
gnomAD
CA3275918
rs747706824
743 D>Y No ClinGen
ExAC
TOPMed
gnomAD
rs1190170769
CA359812710
744 G>C No ClinGen
gnomAD
COSM1197189
COSM1197192
COSM1197194
CA3275916
COSM1197191
COSM1197188
rs182029606
COSM1197193
COSM1197190
745 E>D lung [Cosmic] No ClinGen
cosmic curated
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs367782798
CA3275915
748 T>A No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1046758395
CA118783964
748 T>M No ClinGen
TOPMed
gnomAD
rs757708323
CA3275913
750 K>T No ClinGen
ExAC
gnomAD
rs545766463
CA3275912
752 S>G No ClinGen
1000Genomes
ExAC
gnomAD
rs778301270
CA3275911
753 G>S No ClinGen
ExAC
TOPMed
gnomAD
rs758442946
CA3275910
753 G>V No ClinGen
ExAC
TOPMed
gnomAD
CA3275908
rs765380141
756 V>A No ClinGen
ExAC
TOPMed
gnomAD
rs752733564
CA3275909
756 V>M No ClinGen
ExAC
gnomAD
CA359812546
rs1400645622
757 E>* No ClinGen
gnomAD
rs1306674398
CA359812518
759 D>H No ClinGen
gnomAD
CA118783881
rs759617045
760 T>I No ClinGen
ExAC
TOPMed
gnomAD
CA3275907
rs759617045
760 T>S No ClinGen
ExAC
TOPMed
gnomAD
rs754094337
CA3275906
764 D>G No ClinGen
ExAC
gnomAD
rs1369043685
CA359812393
767 T>I No ClinGen
TOPMed
CA359812390
rs1412324819
768 L>V No ClinGen
gnomAD
CA118783856
rs1058458
769 C>R No ClinGen
Ensembl
CA359812315
rs1580011753
773 S>* No ClinGen
Ensembl
rs1168175467
CA359812273
779 P>L No ClinGen
gnomAD
rs375840888
CA3275902
780 L>F No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA359812271
rs375840888
780 L>V No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA359812267
rs1394361462
781 D>N No ClinGen
TOPMed
rs772172326
CA3275901
782 E>* No ClinGen
ExAC
gnomAD
CA359812156
rs1186516969
789 V>A No ClinGen
gnomAD
CA359812163
rs1246841826
789 V>I No ClinGen
TOPMed
CA3275898
rs761867546
790 G>E No ClinGen
ExAC
gnomAD
rs1310535290
CA359812096
793 E>D No ClinGen
gnomAD
CA359812067
rs1270198092
795 S>I No ClinGen
gnomAD
rs1229281111
CA359812064
795 S>R No ClinGen
gnomAD
CA3275897
rs1058459
796 Q>H No ClinGen
ExAC
gnomAD
rs1295172715
CA359812040
797 P>S No ClinGen
TOPMed
rs575611627
CA359812005
799 A>D No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs575611627
CA3275895
799 A>G No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA3275896
rs575611627
799 A>V No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA560289035
rs1561206950
800 C>* No ClinGen
Ensembl
CA3275894
rs779815130
800 C>F No ClinGen
ExAC
TOPMed
gnomAD
CA359811991
rs779815130
800 C>Y No ClinGen
ExAC
TOPMed
gnomAD
rs201517515
CA3275891
802 I>V No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA3275890
rs368214145
804 D>N No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1159391217
CA560289034
804 D>V No ClinGen
gnomAD
CA3275889
rs748667285
805 R>C No ClinGen
ExAC
TOPMed
gnomAD
CA3275888
rs775821294
805 R>H No ClinGen
ExAC
TOPMed
gnomAD
rs753989811
CA3275885
809 T>M No ClinGen
ExAC
TOPMed
gnomAD

2 associated diseases with Q08499

[MIM: 614613]: Acrodysostosis 2, with or without hormone resistance (ACRDYS2)

A pleiotropic disorder characterized by skeletal, endocrine, and neurological abnormalities. Skeletal features include brachycephaly, midface hypoplasia with a small upturned nose, brachydactyly, and lumbar spinal stenosis. Endocrine abnormalities include hypothyroidism and hypogonadism in males and irregular menses in females. Developmental disability is a common finding but is variable in severity and can be associated with significant behavioral problems. {ECO:0000269|PubMed:22464250, ECO:0000269|PubMed:22464252, ECO:0000269|PubMed:23033274, ECO:0000269|PubMed:23043190}. Note=The disease is caused by variants affecting the gene represented in this entry.

Without disease ID
  • A pleiotropic disorder characterized by skeletal, endocrine, and neurological abnormalities. Skeletal features include brachycephaly, midface hypoplasia with a small upturned nose, brachydactyly, and lumbar spinal stenosis. Endocrine abnormalities include hypothyroidism and hypogonadism in males and irregular menses in females. Developmental disability is a common finding but is variable in severity and can be associated with significant behavioral problems. {ECO:0000269|PubMed:22464250, ECO:0000269|PubMed:22464252, ECO:0000269|PubMed:23033274, ECO:0000269|PubMed:23043190}. Note=The disease is caused by variants affecting the gene represented in this entry.

3 regional properties for Q08499

Type Name Position InterPro Accession
domain 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain 386 - 715 IPR002073
conserved_site 3'5'-cyclic nucleotide phosphodiesterase, conserved site 502 - 513 IPR023174
domain Phosphodiesterase 4 upstream conserved regions (UCR) 223 - 339 IPR040844

Functions

Description
EC Number 3.1.4.53 Phosphoric diester hydrolases
Subcellular Localization
  • Apical cell membrane
  • Cytoplasm
  • Membrane
  • Cytoplasm, cytoskeleton
  • Cytoplasm, cytoskeleton, microtubule organizing center, centrosome
  • Found in the soluble fraction, associated with membranes, and associated with the cytoskeleton and the centrosome (By similarity)
  • Colocalized with SHANK2 to the apical membrane of colonic crypt cells
PANTHER Family PTHR11347 CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
PANTHER Subfamily PTHR11347:SF91 CAMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE 4D
PANTHER Protein Class phosphodiesterase
PANTHER Pathway Category No pathway information available

9 GO annotations of cellular component

Name Definition
apical plasma membrane The region of the plasma membrane located at the apical end of the cell.
calcium channel complex An ion channel complex through which calcium ions pass.
cytosol The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
microtubule organizing center An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
perinuclear region of cytoplasm Cytoplasm situated near, or occurring around, the nucleus.
plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
voltage-gated calcium channel complex A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential.

10 GO annotations of molecular function

Name Definition
3',5'-cyclic-AMP phosphodiesterase activity Catalysis of the reaction: 3',5'-cyclic AMP + H2O = AMP + H+.
3',5'-cyclic-nucleotide phosphodiesterase activity Catalysis of the reaction: a nucleoside 3',5'-cyclic phosphate + H2O = a nucleoside 5'-phosphate.
ATPase binding Binding to an ATPase, any enzyme that catalyzes the hydrolysis of ATP.
beta-2 adrenergic receptor binding Binding to a beta-2 adrenergic receptor.
cAMP binding Binding to cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate).
enzyme binding Binding to an enzyme, a protein with catalytic activity.
heterocyclic compound binding Binding to heterocyclic compound.
metal ion binding Binding to a metal ion.
scaffold protein binding Binding to a scaffold protein. Scaffold proteins are crucial regulators of many key signaling pathways. Although not strictly defined in function, they are known to interact and/or bind with multiple members of a signaling pathway, tethering them into complexes.
transmembrane transporter binding Binding to a transmembrane transporter, a protein or protein complex that enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.

22 GO annotations of biological process

Name Definition
adenylate cyclase-activating adrenergic receptor signaling pathway involved in positive regulation of heart rate An adrenergic receptor signaling pathway that contributes to an increase in frequency or rate of heart contraction. Binding of adrenalin or noradrenalin to a beta-adrenergic receptor on the surface of the signal-receiving cell results in the activation of an intracellular Gs protein. Gs activates adenylate cyclase to increase intracellular cyclic-AMP (cAMP) levels. cAMP binds directly to F-channels to allow an inward flow of sodium (known as funny current, or If current). The funny current is responsible for membrane depolarization and an increase in heart rate.
adrenergic receptor signaling pathway A G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.
cAMP catabolic process The chemical reactions and pathways resulting in the breakdown of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).
cAMP-mediated signaling Any intracellular signal transduction in which the signal is passed on within the cell via cyclic AMP (cAMP). Includes production of cAMP, and downstream effectors that further transmit the signal within the cell.
cellular response to cAMP Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus.
cellular response to epinephrine stimulus Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epinephrine stimulus. Epinephrine is a catecholamine that has the formula C9H13NO3; it is secreted by the adrenal medulla to act as a hormone, and released by certain neurons to act as a neurotransmitter active in the central nervous system.
establishment of endothelial barrier The establishment of a barrier between endothelial cell layers, such as those in the brain, lung or intestine, to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.
negative regulation of cAMP-mediated signaling Any process which stops, prevents, or reduces the frequency, rate or extent of cAMP-mediated signaling.
negative regulation of heart contraction Any process that stops, prevents, or reduces the frequency, rate or extent of heart contraction.
negative regulation of peptidyl-serine phosphorylation Any process that stops, prevents, or reduces the frequency, rate or extent of the phosphorylation of peptidyl-serine.
negative regulation of relaxation of cardiac muscle Any process that stops, prevents or reduces the frequency, rate or extent of relaxation of cardiac muscle.
positive regulation of interferon-gamma production Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon.
positive regulation of interleukin-2 production Any process that activates or increases the frequency, rate, or extent of interleukin-2 production.
positive regulation of interleukin-5 production Any process that activates or increases the frequency, rate, or extent of interleukin-5 production.
regulation of cardiac muscle cell contraction Any process that modulates the frequency, rate or extent of cardiac muscle cell contraction.
regulation of cell communication by electrical coupling involved in cardiac conduction Any process that modulates the frequency, rate or extent of cell communication by electrical coupling involved in cardiac conduction.
regulation of heart rate Any process that modulates the frequency or rate of heart contraction.
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.
regulation of ryanodine-sensitive calcium-release channel activity Any process that modulates the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.
regulation of signaling receptor activity Any process that modulates the frequency, rate or extent of a signaling receptor activity. Receptor activity is when a molecule combines with an extracellular or intracellular messenger to initiate a change in cell activity.
signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
T cell receptor signaling pathway The series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell.

34 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q28156 PDE5A cGMP-specific 3',5'-cyclic phosphodiesterase Bos taurus (Bovine) SS
P23439 PDE6B Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta Bos taurus (Bovine) PR
P52731 PDE6C Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' Gallus gallus (Chicken) PR
H2QL32 PDE9A High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Pan troglodytes (Chimpanzee) PR
Q9VJ79 Pde11 Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 Drosophila melanogaster (Fruit fly) SS
Q9W4T4 dnc 3',5'-cyclic-AMP phosphodiesterase, isoform I Drosophila melanogaster (Fruit fly) SS
O60658 PDE8A High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A Homo sapiens (Human) PR
P27815 PDE4A cAMP-specific 3',5'-cyclic phosphodiesterase 4A Homo sapiens (Human) EV SS
Q07343 PDE4B cAMP-specific 3',5'-cyclic phosphodiesterase 4B Homo sapiens (Human) EV SS
Q08493 PDE4C cAMP-specific 3',5'-cyclic phosphodiesterase 4C Homo sapiens (Human) EV SS
O76083 PDE9A High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Homo sapiens (Human) PR
P54750 PDE1A Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A Homo sapiens (Human) PR
Q9Y233 PDE10A cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Homo sapiens (Human) PR
Q9HCR9 PDE11A Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A Homo sapiens (Human) SS
P35913 PDE6B Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta Homo sapiens (Human) PR
P51160 PDE6C Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' Homo sapiens (Human) PR
O76074 PDE5A cGMP-specific 3',5'-cyclic phosphodiesterase Homo sapiens (Human) EV
P23440 Pde6b Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta Mus musculus (Mouse) PR
O89084 Pde4a 3',5'-cyclic-AMP phosphodiesterase 4A Mus musculus (Mouse) SS
O70628 Pde9a High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Mus musculus (Mouse) PR
Q8CG03 Pde5a cGMP-specific 3',5'-cyclic phosphodiesterase Mus musculus (Mouse) SS
Q8CA95 Pde10a cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Mus musculus (Mouse) PR
P0C1Q2 Pde11a Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A Mus musculus (Mouse) SS
Q3UEI1 Pde4c cAMP-specific 3',5'-cyclic phosphodiesterase 4C Mus musculus (Mouse) PR
Q01063 Pde4d 3',5'-cyclic-AMP phosphodiesterase 4D Mus musculus (Mouse) SS
Q8QZV1 Pde9a High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Rattus norvegicus (Rat) PR
P14646 Pde4b cAMP-specific 3',5'-cyclic phosphodiesterase 4B Rattus norvegicus (Rat) SS
Q8VID6 Pde11a Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A Rattus norvegicus (Rat) SS
O54735 Pde5a cGMP-specific 3',5'-cyclic phosphodiesterase Rattus norvegicus (Rat) SS
P14644 Pde4c cAMP-specific 3',5'-cyclic phosphodiesterase 4C Rattus norvegicus (Rat) PR
P54748 Pde4a 3',5'-cyclic-AMP phosphodiesterase 4A Rattus norvegicus (Rat) SS
Q9QYJ6 Pde10a cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Rattus norvegicus (Rat) PR
P14270 Pde4d cAMP-specific 3',5'-cyclic phosphodiesterase 4D Rattus norvegicus (Rat) PR
Q22000 pde-4 Probable 3',5'-cyclic phosphodiesterase pde-4 Caenorhabditis elegans PR
10 20 30 40 50 60
MEAEGSSAPA RAGSGEGSDS AGGATLKAPK HLWRHEQHHQ YPLRQPQFRL LHPHHHLPPP
70 80 90 100 110 120
PPPSPQPQPQ CPLQPPPPPP LPPPPPPPGA ARGRYASSGA TGRVRHRGYS DTERYLYCRA
130 140 150 160 170 180
MDRTSYAVET GHRPGLKKSR MSWPSSFQGL RRFDVDNGTS AGRSPLDPMT SPGSGLILQA
190 200 210 220 230 240
NFVHSQRRES FLYRSDSDYD LSPKSMSRNS SIASDIHGDD LIVTPFAQVL ASLRTVRNNF
250 260 270 280 290 300
AALTNLQDRA PSKRSPMCNQ PSINKATITE EAYQKLASET LEELDWCLDQ LETLQTRHSV
310 320 330 340 350 360
SEMASNKFKR MLNRELTHLS EMSRSGNQVS EFISNTFLDK QHEVEIPSPT QKEKEKKKRP
370 380 390 400 410 420
MSQISGVKKL MHSSSLTNSS IPRFGVKTEQ EDVLAKELED VNKWGLHVFR IAELSGNRPL
430 440 450 460 470 480
TVIMHTIFQE RDLLKTFKIP VDTLITYLMT LEDHYHADVA YHNNIHAADV VQSTHVLLST
490 500 510 520 530 540
PALEAVFTDL EILAAIFASA IHDVDHPGVS NQFLINTNSE LALMYNDSSV LENHHLAVGF
550 560 570 580 590 600
KLLQEENCDI FQNLTKKQRQ SLRKMVIDIV LATDMSKHMN LLADLKTMVE TKKVTSSGVL
610 620 630 640 650 660
LLDNYSDRIQ VLQNMVHCAD LSNPTKPLQL YRQWTDRIME EFFRQGDRER ERGMEISPMC
670 680 690 700 710 720
DKHNASVEKS QVGFIDYIVH PLWETWADLV HPDAQDILDT LEDNREWYQS TIPQSPSPAP
730 740 750 760 770 780
DDPEEGRQGQ TEKFQFELTL EEDGESDTEK DSGSQVEEDT SCSDSKTLCT QDSESTEIPL
790 800
DEQVEEEAVG EEEESQPEAC VIDDRSPDT