Descriptions

(Annotation based on sequence homology with P29323)
Ephrin type-B receptor 2 is a membrane-associated protein that mediates axon guidance, cell migration and morphogenesis. The Eph receptor tyrosine kinase family is regulated by autophosphorylation within the juxtamembrane region and the kinase activation segment. The structure, supported by mutagenesis data, reveals that the juxtamembrane segment adopts a helical conformation that distorts the small lobe of the kinase domain, and blocks the activation segment from attaining an activated conformation. Phosphorylation of the conserved juxtamembrane tyrosines would relieve this autoinhibition by disturbing the association of the juxtamembrane segment with the kinase domain, while liberating phosphotyrosine sites for binding SH2 domains of target proteins.

Autoinhibitory domains (AIDs)

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

779-807 (Activation loop from InterPro)

Target domain

637-900 (Protein kinase domain)

Relief mechanism

Assay

Autoinhibited structure

Activated structure

1 structures for Q07497

Entry ID Method Resolution Chain Position Source
AF-Q07497-F1 Predicted AlphaFoldDB

No variants for Q07497

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q07497

No associated diseases with Q07497

13 regional properties for Q07497

Type Name Position InterPro Accession
domain Protein kinase domain 637 - 900 IPR000719
domain Ephrin receptor ligand binding domain 31 - 213 IPR001090
domain Serine-threonine/tyrosine-protein kinase, catalytic domain 637 - 896 IPR001245
conserved_site Tyrosine-protein kinase, receptor class V, conserved site 189 - 209 IPR001426-1
conserved_site Tyrosine-protein kinase, receptor class V, conserved site 256 - 276 IPR001426-2
domain Sterile alpha motif domain 926 - 993 IPR001660
domain Fibronectin type III 342 - 452 IPR003961-1
domain Fibronectin type III 453 - 548 IPR003961-2
active_site Tyrosine-protein kinase, active site 758 - 770 IPR008266
domain Tyrosine-protein kinase ephrin type A/B receptor-like 274 - 309 IPR011641
binding_site Protein kinase, ATP binding site 643 - 669 IPR017441
domain Tyrosine-protein kinase, catalytic domain 637 - 896 IPR020635
domain Ephrin receptor, transmembrane domain 562 - 634 IPR027936

Functions

Description
EC Number 2.7.10.1 Protein-tyrosine kinases
Subcellular Localization
  • Membrane; Single-pass type I membrane protein
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

3 GO annotations of cellular component

Name Definition
integral component of plasma membrane The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
neuron projection A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
receptor complex Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.

3 GO annotations of molecular function

Name Definition
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
transmembrane receptor protein tyrosine kinase activity Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.
transmembrane-ephrin receptor activity Combining with a transmembrane ephrin to initiate a change in cell activity.

4 GO annotations of biological process

Name Definition
axon guidance The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.
central nervous system projection neuron axonogenesis Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region.
positive regulation of kinase activity Any process that activates or increases the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
transmembrane receptor protein tyrosine kinase signaling pathway The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.

52 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q07494 EPHB1 Ephrin type-B receptor 1 Gallus gallus (Chicken) SS
O42422 EPHA7 Ephrin type-A receptor 7 Gallus gallus (Chicken) SS
P29318 EPHA3 Ephrin type-A receptor 3 Gallus gallus (Chicken) SS
Q07496 EPHA4 Ephrin type-A receptor 4 Gallus gallus (Chicken) SS
P28693 EPHB2 Ephrin type-B receptor 2 Gallus gallus (Chicken) PR
P54755 EPHA5 Ephrin type-A receptor 5 Gallus gallus (Chicken) SS
Q07498 EPHB3 Ephrin type-B receptor 3 Gallus gallus (Chicken) SS
P0C0K6 EPHB6 Ephrin type-B receptor 6 Pan troglodytes (Chimpanzee) SS
P29322 EPHA8 Ephrin type-A receptor 8 Homo sapiens (Human) SS
P21709 EPHA1 Ephrin type-A receptor 1 Homo sapiens (Human) SS
P54764 EPHA4 Ephrin type-A receptor 4 Homo sapiens (Human) SS
P54753 EPHB3 Ephrin type-B receptor 3 Homo sapiens (Human) SS
P29320 EPHA3 Ephrin type-A receptor 3 Homo sapiens (Human) PR
P54760 EPHB4 Ephrin type-B receptor 4 Homo sapiens (Human) SS
P29317 EPHA2 Ephrin type-A receptor 2 Homo sapiens (Human) SS
Q15375 EPHA7 Ephrin type-A receptor 7 Homo sapiens (Human) SS
Q5JZY3 EPHA10 Ephrin type-A receptor 10 Homo sapiens (Human) SS
Q9UF33 EPHA6 Ephrin type-A receptor 6 Homo sapiens (Human) SS
P54762 EPHB1 Ephrin type-B receptor 1 Homo sapiens (Human) SS
P54756 EPHA5 Ephrin type-A receptor 5 Homo sapiens (Human) SS
O15197 EPHB6 Ephrin type-B receptor 6 Homo sapiens (Human) SS
P29323 EPHB2 Ephrin type-B receptor 2 Homo sapiens (Human) EV
P54754 Ephb3 Ephrin type-B receptor 3 Mus musculus (Mouse) SS
Q03145 Epha2 Ephrin type-A receptor 2 Mus musculus (Mouse) PR
Q03137 Epha4 Ephrin type-A receptor 4 Mus musculus (Mouse) SS
Q61772 Epha7 Ephrin type-A receptor 7 Mus musculus (Mouse) SS
O09127 Epha8 Ephrin type-A receptor 8 Mus musculus (Mouse) SS
Q8CBF3 Ephb1 Ephrin type-B receptor 1 Mus musculus (Mouse) SS
Q8BYG9 Epha10 Ephrin type-A receptor 10 Mus musculus (Mouse) SS
Q60629 Epha5 Ephrin type-A receptor 5 Mus musculus (Mouse) SS
P29319 Epha3 Ephrin type-A receptor 3 Mus musculus (Mouse) SS
Q62413 Epha6 Ephrin type-A receptor 6 Mus musculus (Mouse) SS
Q60750 Epha1 Ephrin type-A receptor 1 Mus musculus (Mouse) SS
P54761 Ephb4 Ephrin type-B receptor 4 Mus musculus (Mouse) PR
O08644 Ephb6 Ephrin type-B receptor 6 Mus musculus (Mouse) PR
P54763 Ephb2 Ephrin type-B receptor 2 Mus musculus (Mouse) SS
P54757 Epha5 Ephrin type-A receptor 5 Rattus norvegicus (Rat) SS
P54759 Epha7 Ephrin type-A receptor 7 Rattus norvegicus (Rat) SS
P09759 Ephb1 Ephrin type-B receptor 1 Rattus norvegicus (Rat) SS
P0C0K7 Ephb6 Ephrin type-B receptor 6 Rattus norvegicus (Rat) SS
O08680 Epha3 Ephrin type-A receptor 3 Rattus norvegicus (Rat) SS
O61460 vab-1 Ephrin receptor 1 Caenorhabditis elegans SS
Q0WNY5 WAKL18 Wall-associated receptor kinase-like 18 Arabidopsis thaliana (Mouse-ear cress) PR
Q7X8C5 WAKL2 Wall-associated receptor kinase-like 2 Arabidopsis thaliana (Mouse-ear cress) PR
Q8VYA3 WAKL10 Wall-associated receptor kinase-like 10 Arabidopsis thaliana (Mouse-ear cress) PR
Q9C9L5 WAKL9 Wall-associated receptor kinase-like 9 Arabidopsis thaliana (Mouse-ear cress) PR
Q9LMN7 WAK5 Wall-associated receptor kinase 5 Arabidopsis thaliana (Mouse-ear cress) PR
Q9M092 WAKL17 Wall-associated receptor kinase-like 17 Arabidopsis thaliana (Mouse-ear cress) PR
Q9S9M2 WAKL4 Wall-associated receptor kinase-like 4 Arabidopsis thaliana (Mouse-ear cress) PR
O13147 ephb3 Ephrin type-B receptor 3 Danio rerio (Zebrafish) (Brachydanio rerio) SS
O73878 ephb4b Ephrin type-B receptor 4b Danio rerio (Zebrafish) (Brachydanio rerio) SS
O13146 epha3 Ephrin type-A receptor 3 Danio rerio (Zebrafish) (Brachydanio rerio) SS
10 20 30 40 50 60
MDSNADISAR RVSGMDWLWL VCFFHLVTSL EEILLDTTGE TSEIGWTSHP PDGWEEVSVR
70 80 90 100 110 120
DDKERQIRTF QVCNMDEPGQ NNWLRTHFIE RRGAHRVHVR LHFSVRDCAS MRTVASTCKE
130 140 150 160 170 180
TFTLYYHQSD VDIASQELPE WHEGPWTKVD TIAADESFSQ VDRTGKVVRM NVKVRSFGPL
190 200 210 220 230 240
TKHGFYLAFQ DSGACMSLVA VQVFFYKCPA VVKGFASFPE TFAGGERTSL VESLGTCVAN
250 260 270 280 290 300
AEEASTTGSS GVRLHCNGEG EWMVATGRCS CKAGYQSVDN EQACQACPIG SFKASVGDDP
310 320 330 340 350 360
CLLCPAHSHA PLPLPGSIEC VCQSHYYRSA SDNSDAPCTG IPSAPRDLSY EIVGSNVLLT
370 380 390 400 410 420
WRLPKDLGGR KDVFFNVICK ECPTRSAGTC VRCGDNVQFE PRQVGLTESR VQVSNLLARV
430 440 450 460 470 480
QYTFEIQAVN LVTELSSEAP QYATINVSTS QSVPSAIPMM HQVSRATSSI TLSWPQPDQP
490 500 510 520 530 540
NGVILDYQLR YFDKAEDEDN SFTLTSETNM ATILNLSPGK IYVFQVRART AVGYGPYSGK
550 560 570 580 590 600
MYFQTLMAGE HSEMAQDRLP LIVGSALGGL AFLVIAAIAI LAIIFKSKRR ETPYTDRLQQ
610 620 630 640 650 660
YISTRGLGVK YYIDPSTYED PNEAIREFAK EIDVSFIKIE EVIGSGEFGE VCFGRLKHPG
670 680 690 700 710 720
KREYTVAIKT LKSGYTDEQR REFLSEASIM GQFEHPNVIH LEGVVTKSRP VMIVTEFMEN
730 740 750 760 770 780
GSLDSFLRQK EGQFSVLQLV GMLRGIAAGM RYLSDMNYVH RDLAARNILV NSNLVCKVSD
790 800 810 820 830 840
FGLSRFLEDD ASNPTYTGAL GCKIPIRWTA PEAVQYRKFT SSSDVWSYGI VMWEVMSYGE
850 860 870 880 890 900
RPYWDMSNQD VINAIDQDYR LPPPPDCPTV LHLLMLDCWQ KDRVQRPKFE QIVSALDKMI
910 920 930 940 950 960
RKPSALKATG TGSSRPSQPL LSNSPPDFPS LSNAHEWLDA IKMGRYKENF DQAGLITFDV
970 980 990 1000
ISRMTLEDLQ RIGITLVGHQ KKILNSIQLM KVHLNQLEPV EV