Q02846
Gene name |
GUCY2D |
Protein name |
Retinal guanylyl cyclase 1 |
Names |
RETGC-1, CG-E, Guanylate cyclase 2D, retinal, Rod outer segment membrane guanylate cyclase, ROS-GC |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:3000 |
EC number |
4.6.1.2: Phosphorus-oxygen lyases |
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

1 structures for Q02846
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
AF-Q02846-F1 | Predicted | AlphaFoldDB |
1208 variants for Q02846
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
RCV001250812 RCV000084899 RCV000084898 rs281865409 RCV001250813 RCV001388964 |
1 | M>I | Leber congenital amaurosis 1 Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs281865408 RCV001250811 RCV000084880 |
1 | M>K | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001205998 rs1975657312 |
5 | A>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001198127 rs1975658549 |
14 | P>A | Choroidal dystrophy, central areolar, 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs1008930073 CA287522837 RCV001201774 RCV002484079 |
17 | C>R | Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs63749076 RCV001250819 RCV000084900 |
18 | G>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001518411 RCV000084902 rs9905402 CA145844 VAR_067168 RCV000078320 |
21 | W>R | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA397942558 rs1308509257 RCV001234701 |
22 | W>* | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 [Ensembl, ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA8365468 RCV001082983 RCV000787615 rs557108466 RCV000512972 |
25 | S>F | Cone-rod dystrophy 6 Progressive cone dystrophy (without rod involvement) [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
RCV002513910 rs61749663 RCV001250872 RCV000084905 |
31 | R>missing | Leber congenital amaurosis 1 Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs755150485 CA8365469 RCV001327133 RCV002546213 |
33 | L>Q | Cone-rod dystrophy 6 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs748156659 RCV001209241 |
35 | R>L | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
CA226039 RCV000084829 RCV002477248 RCV001227542 RCV002466425 rs61749664 |
41 | L>F | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 [Ensembl, ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000415795 RCV001199370 RCV000784899 RCV000414862 RCV001352942 rs552184470 RCV001081143 RCV000989733 |
44 | L>missing | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs1567956946 RCV001267881 |
49 | A>P | Leber congenital amaurosis 1 Variant assessed as Somatic; 0.0 impact. [ClinVar, NCI-TCGA] | Yes |
ClinVar NCI-TCGA dbSNP |
rs771232307 RCV001041694 CA8365475 |
49 | A>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000078318 rs61749665 RCV000084835 RCV002225071 VAR_003435 CA145842 RCV002490349 RCV001518075 RCV000009947 |
52 | A>S | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 Leber congenital amaurosis 1 (lca1) LCA1; unknown pathological significance [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV000132567 RCV001725998 CA232809 VAR_067169 RCV001079675 rs201414567 RCV000989734 |
55 | T>M | Cone-rod dystrophy 6 LCA1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs1975665345 RCV001250820 |
60 | G>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
CA8365481 RCV001295859 rs761828482 |
63 | A>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001211560 rs1328542671 CA397942963 |
69 | S>C | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV001250874 rs750153057 RCV003130233 |
73 | P>L | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs281865410 RCV001250821 RCV000084855 |
76 | A>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
CA287523070 RCV001294695 rs558294899 |
78 | R>C | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs1975666989 RCV001325354 |
78 | R>missing | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001783004 rs952193754 RCV000504622 |
80 | A>missing | Cone dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
RCV001347373 rs952193754 |
80 | A>missing | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001313247 CA397943070 rs1300514080 |
88 | P>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV002056936 rs573367793 RCV000175541 CA241298 |
91 | A>P | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs1304984076 CA397943137 RCV001201484 |
99 | A>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs1304984076 RCV001297954 CA397943135 |
99 | A>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV000505073 RCV001250822 CA226122 RCV001053255 RCV000084885 rs61749668 |
103 | E>K | Cone-rod dystrophy 6 (cord6) Leber congenital amaurosis 1 Cone-rod dystrophy 6 Leber congenital amaurosis 1 (lca1) Cone dystrophy [Ensembl, ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
VAR_067170 | 103 | E>V | LCA1 [UniProt] | Yes | UniProt |
VAR_023770 CA226132 RCV000084890 rs61749669 |
105 | C>Y | LCA1; does not affect basal guanylate cyclase activity; reduces GUCA1A-induced guanylate cyclase activity [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV000762200 RCV002061033 CA397943215 rs1445892049 |
113 | A>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
rs562248093 RCV001462580 RCV001073713 CA8365493 |
115 | S>P | Cone-rod dystrophy 6 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs1975671628 RCV001071365 |
120 | R>C | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV002516252 RCV000225589 CA10581703 rs878853343 |
127 | P>L | Cone-rod dystrophy 6 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs63340060 RCV000084896 CA226141 RCV001250823 |
129 | N>K | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV000084897 RCV000009945 RCV000693446 rs61749670 RCV002498447 RCV001003037 |
130 | P>missing | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 Leber congenital amaurosis [ClinVar] | Yes |
ClinVar dbSNP |
rs776276813 RCV001306568 CA8365494 |
140 | A>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV001212926 rs1975674167 |
144 | G>V | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs1975675766 RCV001250824 |
168 | A>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs978982123 RCV001244132 CA287523303 |
174 | A>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
CA397944105 rs1403798841 RCV001250863 |
181 | W>* | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV001250869 rs1975678842 |
189 | A>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001092404 rs375259185 RCV001873455 CA8365510 |
189 | A>V | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001208175 CA397944247 rs1484809146 |
190 | P>R | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV000732853 RCV001592935 rs768390959 CA8365511 |
191 | Q>* | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA8365514 rs528169554 RCV001068385 |
192 | D>E | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs917296356 RCV001228532 CA397944401 |
199 | R>C | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV001250825 rs1370721862 |
199 | R>P | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
CA287523361 RCV002564085 RCV001244255 rs917296356 |
199 | R>S | Cone-rod dystrophy 6 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV001308907 rs1975680506 |
203 | T>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs764280512 RCV001240450 CA8365519 |
205 | L>F | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs61749671 RCV000084903 RCV000009946 |
208 | R>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
CA397944547 rs765369504 RCV001302195 |
208 | R>Q | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
TCGA novel RCV000533934 CA8365536 rs181800610 |
232 | K>N | Cone-rod dystrophy 6 Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD NCI-TCGA |
rs1975686657 RCV002570446 RCV001250826 |
242 | V>G | Leber congenital amaurosis 1 Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001065469 rs141956583 CA8365560 |
244 | M>L | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001250815 CA8365563 rs768206746 |
247 | H>R | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP |
rs138922415 CA397945069 RCV001250878 |
248 | S>L | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000799716 rs1243270832 CA397945084 |
251 | L>P | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 [Ensembl, ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
rs745444949 RCV001040109 |
263 | A>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
COSM179949 CA397945172 rs1346762413 RCV001318652 |
265 | E>K | Cone-rod dystrophy 6 large_intestine Variant assessed as Somatic; impact. [ClinVar, Cosmic, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA TOPMed dbSNP |
rs143745703 RCV000624057 RCV001075746 CA8365581 |
283 | Y>* | Retinal dystrophy Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP |
RCV000504837 rs1555634713 |
301 | L>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
RCV000796233 rs1598144694 |
305 | H>missing | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001230310 rs1975693728 |
309 | L>missing | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs1975693830 RCV001352963 |
310 | T>N | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
VAR_067171 rs61749673 RCV001250818 CA226155 RCV000084906 |
312 | T>M | Cone-rod dystrophy 6 (cord6) Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) LCA1 [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
RCV001250827 RCV000084907 CA226156 rs61749674 RCV001306870 |
313 | R>C | Leber congenital amaurosis 1 Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 Leber congenital amaurosis 1 (lca1) [ClinVar, NCI-TCGA, Ensembl] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV000084908 CA226158 rs61749675 VAR_023771 |
325 | L>P | LCA1; does not affect basal guanylate cyclase activity; reduces GUCA1A-induced guanylate cyclase activity [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
VAR_049254 RCV001065966 CA8365609 rs34596269 |
331 | R>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
RCV001250828 rs755999834 |
333 | E>* | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs368799458 CA8365613 RCV001760344 RCV001298220 |
341 | Q>K | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
CA8365635 RCV001307489 rs768812125 |
344 | S>C | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs1372180006 CA397947621 RCV001319319 |
346 | L>H | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV000505564 rs763890649 |
347 | F>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001377421 rs61749676 CA226036 RCV001250829 RCV000084827 |
351 | Y>C | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002482003 RCV001055559 rs186508466 CA8365647 |
361 | V>M | Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs61749677 VAR_009129 CA226038 RCV000084828 |
362 | A>S | LCA1 [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
RCV001201551 CA8365650 rs141917297 |
365 | R>Q | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001083929 rs138836357 CA245079 RCV000989735 RCV000487602 RCV001001148 |
365 | R>W | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001078901 CA8365663 RCV000756220 rs775105018 |
380 | R>C | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs373827556 CA287524693 RCV001297488 |
383 | R>Q | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
rs545271894 CA8365665 RCV001040345 |
383 | R>W | Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs1301307214 RCV001244020 CA397947849 |
385 | A>V | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs755223158 CA8365670 RCV000983924 |
387 | V>D | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001250877 rs1975743813 |
404 | L>P | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
VAR_067173 | 405 | L>PN | LCA1 [UniProt] | Yes | UniProt |
rs377650196 RCV001250875 |
407 | T>K | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs377650196 RCV001331046 |
407 | T>R | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001204647 rs773030462 CA8365687 |
410 | A>V | Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV001306339 rs1253086014 CA397948037 |
413 | R>Q | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
rs1598146173 RCV000989736 RCV001858713 |
415 | F>missing | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
CA8365694 rs202111469 CA8365695 RCV001232330 |
419 | M>I | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD ClinVar dbSNP |
CA8365696 RCV001318877 rs375468242 |
425 | G>A | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001227623 CA8365701 rs769749617 |
433 | R>G | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
VAR_067174 rs565948960 RCV001301956 CA8365706 |
438 | R>C | Cone-rod dystrophy 6 LCA1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
CA8365708 RCV001078961 RCV000415352 RCV000487886 rs140638938 CA8365709 RCV001198299 |
439 | G>R | Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 [ClinVar] | Yes |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD ClinVar dbSNP |
RCV001855624 CA287524991 rs1029006549 RCV001796769 RCV000678574 |
447 | P>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs61749679 RCV000989737 RCV000084831 RCV001037164 CA226043 RCV001250830 |
448 | S>* | Cone-rod dystrophy 6 (cord6) Leber congenital amaurosis 1 Cone-rod dystrophy 6 Leber congenital amaurosis 1 (lca1) [Ensembl, ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA8365715 RCV001313431 rs61749679 |
448 | S>L | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 Leber congenital amaurosis 1 (lca1) [Ensembl, ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs1567958644 RCV000761438 |
464 | G>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV000787611 rs1598146589 |
482 | F>missing | Leber congenital amaurosis [ClinVar] | Yes |
ClinVar dbSNP |
RCV001317435 CA8365771 COSM708679 rs753488664 |
490 | R>Q | lung Cone-rod dystrophy 6 [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
CA8365777 rs751263915 RCV001316215 |
499 | G>R | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs200211315 RCV000179270 RCV001051919 CA246543 |
500 | P>L | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs1975767998 RCV001320629 |
501 | N>D | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
CA8365781 rs746002871 RCV001213710 VAR_042231 |
507 | V>M | Cone-rod dystrophy 6 Variant assessed as Somatic; 9.259e-05 impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs1975768901 RCV001250864 |
511 | T>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
CA226047 RCV000356487 RCV001084922 rs61749682 RCV000084834 |
513 | L>F | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs1975769511 RCV001247689 |
515 | P>L | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
CA8365790 RCV001229951 rs549834851 |
519 | T>I | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
RCV000791170 rs748798324 RCV000791168 RCV000791169 CA287525681 |
521 | R>* | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV001068217 rs1168076308 |
525 | Q>* | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs1975777337 RCV001347399 |
526 | G>R | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
CA397949593 rs1349155167 RCV001235694 |
528 | R>* | Cone-rod dystrophy 6 (cord6) Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 [Ensembl, NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
RCV001351399 CA8365826 rs759173115 |
536 | M>I | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs61749754 RCV001854485 RCV000084838 CA226052 |
540 | R>C | Cone-rod dystrophy 6 (cord6) Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 [Ensembl, NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV001242493 CA8365829 rs146570135 |
542 | G>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs1290420698 RCV000850097 CA397949792 RCV000850098 |
545 | Q>* | Leber congenital amaurosis 1 Night blindness, congenital stationary, type1i Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV001060452 rs1975779836 |
554 | V>I | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV000989738 RCV001070091 RCV001003038 RCV002488082 rs188568530 CA8365854 |
558 | D>N | Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 Leber congenital amaurosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA226054 rs61749755 RCV000009944 RCV000084839 VAR_009131 |
565 | F>S | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) LCA1; loss of activity [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV001298771 CA8365858 rs568220391 |
569 | Q>H | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen 1000Genomes ExAC gnomAD ClinVar dbSNP |
VAR_009130 rs61749756 CA226055 RCV001047568 RCV000084840 |
573 | I>V | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 LCA1 [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
CA228867 RCV001306268 rs137853897 RCV000086930 COSM1209214 |
574 | R>C | Cone-rod dystrophy 6 (cord6) Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 large_intestine [Ensembl, NCI-TCGA, ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV000585088 COSM1253916 RCV001314273 rs560270873 CA8365861 |
574 | R>H | Cone-rod dystrophy 6 oesophagus [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002477249 CA203556 RCV000180103 rs28743021 RCV001086101 RCV000084841 |
575 | P>L | Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA8365892 RCV001297585 rs765906787 |
586 | E>D | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA397951195 RCV001230443 rs1380583409 |
588 | R>Q | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs794727952 RCV000180468 RCV001526721 RCV001852248 |
591 | N>missing | Leber congenital amaurosis 1 Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs1975862803 RCV001250831 |
591 | N>D | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV002462918 CA8365903 rs770740012 VAR_049255 RCV001303191 |
602 | R>W | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
rs63749078 RCV000084842 RCV001250832 |
604 | A>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
CA397951401 RCV001064042 rs1451847992 |
606 | G>D | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA287530897 rs1009884304 RCV001240211 |
609 | A>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV001322331 CA8365912 rs779224998 |
610 | L>I | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001207903 rs1975865453 |
614 | N>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001301472 rs767258249 CA8365917 |
618 | V>I | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs746020263 RCV001230117 CA8365923 |
624 | R>Q | Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
RCV001070563 CA8365922 rs757230483 |
624 | R>W | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV001075480 rs1336876328 CA397951662 |
626 | S>C | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
CA8365928 RCV001295013 rs770016889 |
629 | D>E | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001295348 CA8365933 rs759957436 |
634 | R>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001212854 rs1975867670 |
635 | E>G | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
VAR_067175 | 640 | W>L | LCA1 [UniProt] | Yes | UniProt |
RCV001250833 rs1975868246 |
642 | F>V | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001251456 rs1975868606 |
646 | L>P | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs1975868797 RCV001250868 |
648 | L>P | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs750399947 CA8365958 RCV001075637 |
655 | R>K | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs1975872237 RCV001197250 |
658 | H>Q | Choroidal dystrophy, central areolar, 1 [ClinVar] | Yes |
ClinVar dbSNP |
CA397952078 RCV000989740 rs1598149154 |
658 | H>Y | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA226062 RCV001047937 rs61750161 RCV001250870 RCV000084847 |
660 | R>* | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar 1000Genomes TOPMed dbSNP gnomAD |
VAR_067176 RCV000084848 RCV001047346 CA226064 rs61750162 |
660 | R>Q | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 LCA1 [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
rs143585840 RCV002489567 RCV001040770 COSM3388287 CA8365962 RCV002250718 |
662 | V>M | Cone-rod dystrophy 6 pancreas Choroidal dystrophy, central areolar, 1 Night blindness, congenital stationary, type1i [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001003039 rs1598149187 CA397952164 |
664 | H>Q | Leber congenital amaurosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV001760043 rs757387072 CA8365964 RCV001067287 |
666 | R>W | Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV001250834 rs931906767 CA287531201 |
670 | R>W | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar dbSNP gnomAD |
rs1975873821 RCV001342326 |
672 | C>Y | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
CA8365976 rs766482364 RCV001304543 |
686 | G>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002486139 CA8365977 RCV001297715 RCV003166665 rs751340355 |
687 | H>Y | Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA8365988 RCV002539486 rs200128473 RCV001301851 |
698 | P>R | Cone-rod dystrophy 6 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
RCV000173653 RCV001250835 RCV002498446 rs34598902 RCV000084851 CA200657 VAR_009132 RCV001518412 |
701 | P>S | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 Leber congenital amaurosis 1 (lca1) at homozygosity may be associated with Leber congenital amaurosis in some populations [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001231431 CA8365991 rs577880164 |
703 | A>V | Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
CA16621700 RCV001360599 RCV000488275 rs1064797217 |
708 | W>R | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
VAR_082624 rs781725943 RCV001003040 CA287531867 |
710 | A>V | Leber congenital amaurosis LCA1; loss of basal and GUCA1A-induced guanylate cyclase activity; does not affect endoplasmic reticulum membrane localization [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV001306871 rs765463082 CA8366018 RCV001250836 |
711 | P>L | Leber congenital amaurosis 1 Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 Leber congenital amaurosis 1 (lca1) [ClinVar, NCI-TCGA, Ensembl] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
VAR_049256 RCV000945910 rs34331388 RCV001811545 CA8366030 |
722 | R>W | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001057559 RCV001585958 CA8366032 rs561318435 |
724 | T>M | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs1975890613 RCV001250837 |
726 | A>V | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs146820642 RCV002497460 RCV001065277 RCV001700693 CA8366036 |
727 | G>S | Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
VAR_067177 | 728 | D>H | LCA1 [UniProt] | Yes | UniProt |
RCV001074405 rs766646217 CA8366038 RCV001862558 |
728 | D>N | Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 Retinal dystrophy [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
VAR_067178 | 734 | I>A | LCA1; requires 2 nucleotide substitutions [UniProt] | Yes | UniProt |
rs1975891409 RCV001228156 |
735 | I>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001063561 rs532577225 CA8366045 |
742 | R>C | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
RCV000787612 rs1598149659 |
745 | P>missing | Leber congenital amaurosis [ClinVar] | Yes |
ClinVar dbSNP |
RCV001206653 rs747951577 COSM2804621 CA8366054 |
754 | E>K | Cone-rod dystrophy 6 breast Variant assessed as Somatic; 4.654e-05 impact. [ClinVar, Cosmic, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
COSM176434 RCV002290577 CA8366077 RCV001059685 rs200637525 |
761 | R>W | Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 large_intestine Night blindness, congenital stationary, type1i [NCI-TCGA, ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV001232110 rs1975906957 |
764 | P>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
CA8366083 RCV000678575 RCV001784301 RCV001003041 rs750889782 |
768 | R>Q | Leber congenital amaurosis 1 Leber congenital amaurosis [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000084856 RCV000850094 RCV000543628 VAR_067179 rs61750168 RCV001075745 RCV002477250 CA226075 RCV000850093 RCV000787613 |
768 | R>W | Cone-rod dystrophy 6 (cord6) Leber congenital amaurosis 1 Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 Night blindness, congenital stationary, type1i Leber congenital amaurosis Leber congenital amaurosis 1 (lca1) Retinal dystrophy LCA1 and CSNB1I [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
RCV002504353 rs143650826 RCV001244625 CA8366085 |
773 | M>T | Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
CA8366087 RCV001337358 CA397953178 rs368384232 |
775 | Q>H | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ESP ExAC TOPMed gnomAD ClinVar dbSNP |
RCV001250838 rs1975909279 |
780 | C>R | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV000248393 RCV001701716 rs8069344 CA8366093 RCV001702378 RCV001651111 RCV001702377 RCV001517915 RCV000989741 VAR_009133 |
782 | L>H | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 Night blindness, congenital stationary, type1i [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA397953230 rs375010731 VAR_067180 |
784 | M>R | LCA1 [UniProt] | Yes |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
rs368958527 CA8366096 RCV001352537 |
787 | C>G | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs1555635668 RCV000558435 |
793 | E>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
VAR_067181 rs61750171 RCV000732735 RCV001250839 CA8366103 |
795 | R>Q | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) LCA1 [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
rs1975911358 RCV001250840 |
798 | M>R | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001208974 rs1975911430 |
800 | H>missing | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs1196292120 RCV000816166 CA397953427 |
811 | G>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV001212256 rs894774212 CA287532908 |
812 | R>G | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs1477300555 CA397953440 RCV001346183 |
813 | K>N | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA8366134 RCV001347446 rs150742659 |
814 | T>M | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
CA397953494 RCV001074530 rs1325253963 |
821 | L>P | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA220457 RCV000078319 RCV002514374 rs398123233 |
822 | R>P | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs1975925661 RCV001240710 |
827 | Y>C | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001074379 RCV001862557 rs1975925973 |
831 | L>P | Cone-rod dystrophy 6 Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
RCV001337669 rs1975926150 |
832 | E>K | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001319485 rs145420245 CA8366142 |
836 | R>W | Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 6 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV000009950 RCV000009948 RCV000084860 VAR_003436 CA226082 rs28933695 |
837 | E>D | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 CORD6 [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
VAR_003438 | 837 | E>DCM | CORD6 [UniProt] | Yes | UniProt |
RCV000084862 RCV001197374 RCV001074299 rs61750172 RCV000009950 RCV001376215 RCV001003042 RCV001065465 CA226085 RCV000009949 VAR_003437 |
838 | R>C | Cone-rod dystrophy 6 (cord6) Leber congenital amaurosis 1 Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 Leber congenital amaurosis 1 (lca1) Variant assessed as Somatic; 4.621e-05 impact. Retinal dystrophy Cone dystrophy CORD6 [Ensembl, ClinVar, NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt NCI-TCGA TOPMed dbSNP gnomAD |
VAR_071605 | 838 | R>G | CORD6 [UniProt] | Yes | UniProt |
VAR_015373 RCV000504851 RCV000787614 CA226086 RCV001723556 COSM1387554 RCV001003043 RCV001271114 RCV000084863 RCV000009951 rs61750173 RCV001228516 |
838 | R>H | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 Retinitis pigmentosa large_intestine Variant assessed as Somatic; impact. Progressive cone dystrophy (without rod involvement) Cone dystrophy Retinal dystrophy Retinitis pigmentosa (rp) CORD6 [Ensembl, ClinVar, Cosmic, NCI-TCGA, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt Ensembl NCI-TCGA dbSNP |
CA397953618 RCV001002057 RCV001869428 RCV001075542 rs61750173 VAR_071606 |
838 | R>P | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 Retinal dystrophy Retinitis pigmentosa (rp) CORD6 [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
rs61750172 RCV001854486 RCV000084861 CA226083 RCV000009948 |
838 | R>S | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 Leber congenital amaurosis 1 (lca1) [Ensembl, ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV001207599 rs756044745 |
839 | T>missing | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs61750174 RCV000009950 RCV000084864 RCV001239266 CA226087 |
839 | T>M | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 [Ensembl, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
rs61750174 CA8366146 RCV000786870 RCV001341059 |
839 | T>R | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 [Ensembl, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
RCV002568711 CA397953660 RCV001250841 rs1341592819 |
841 | E>* | GUCY2D retinopathy Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
rs1341592819 RCV001003044 VAR_082625 CA397953656 |
841 | E>K | CORD6; decreases basal and GUCA1A-induced guanylate cyclase activity; inhibition by RD3 is less effective; does not affect endoplasmic reticulum membrane localization [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
RCV001074834 rs1975927557 |
842 | L>P | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
CA287533068 RCV001879809 rs962715477 RCV001250842 |
844 | L>P | Leber congenital amaurosis 1 Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA397953725 rs1598150539 VAR_082626 RCV002267758 RCV001860527 |
846 | K>N | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 Cone-rod dystrophy CORD6; decreases basal and GUCA1A-induced guanylate cyclase activity; inhibition by RD3 is less effective; does not affect endoplasmic reticulum membrane localization [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
VAR_071607 | 849 | T>A | CORD6 [UniProt] | Yes | UniProt |
RCV000700865 rs1555635778 RCV000593037 RCV000989742 CA397953824 |
855 | Q>* | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs61750176 CA226091 VAR_009134 RCV000084866 |
858 | P>S | LCA1; severely impairs basal and GUCA1A-induced guanylate cyclase activity [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
rs61750176 RCV001316865 CA287533114 |
858 | P>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV001229728 rs374515716 CA8366156 |
859 | P>L | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 [Ensembl, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001068218 rs1200134985 |
866 | K>missing | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001250816 CA8366175 RCV000556412 rs201587670 RCV000989743 |
866 | K>N | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
rs375727197 RCV001348130 CA287533246 |
867 | T>K | Cone-rod dystrophy 6 Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV002250683 CA397953944 RCV002267739 RCV001074400 VAR_082627 rs1567961680 RCV000697191 |
873 | P>R | Cone-rod dystrophy 6 Night blindness, congenital stationary, type1i Cone-rod dystrophy Retinal dystrophy CORD6; loss basal and GUCA1A-induced guanylate cyclase activity; does not affect endoplasmic reticulum membrane localization [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV002248709 RCV001047394 CA16620650 RCV000481166 rs1001538483 |
874 | E>K | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
rs762981013 RCV001250871 CA8366181 |
876 | F>S | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs1598150748 RCV001262104 |
883 | F>missing | Leber congenital amaurosis [ClinVar] | Yes |
ClinVar dbSNP |
RCV001250844 CA287533283 rs573270795 |
887 | V>G | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs1975935914 RCV001270353 |
902 | V>A | Cone-rod dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
CA397954140 VAR_082628 rs1598150793 RCV002267759 |
902 | V>L | Cone-rod dystrophy LCA1; increases basal and GUCA1A-induced guanylate cyclase activity; inhibition by RD3 is less effective; does not affect endoplasmic reticulum membrane localization [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV001073425 rs1975936032 RCV001862804 |
903 | D>Y | Cone-rod dystrophy 6 Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
CA397954171 COSM1709767 RCV001074002 rs1314298060 |
907 | D>N | Variant assessed as Somatic; 0.0 impact. skin Retinal dystrophy [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA dbSNP gnomAD |
RCV000714546 CA287533367 RCV000714547 RCV000714545 rs1006935198 |
922 | Y>* | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV001327208 rs1975943872 |
927 | I>V | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs1975943992 RCV001250846 |
928 | G>A | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
CA397954359 VAR_080484 RCV000755725 rs1567961904 |
933 | V>A | Choroidal dystrophy, central areolar, 1 CACD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV000084870 RCV001250847 CA226097 rs61750179 |
934 | A>P | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV001171921 RCV002558725 rs1975945188 |
938 | P>R | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
CA8366238 RCV001063536 rs756575304 |
944 | R>G | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs61750180 RCV001052013 RCV001542698 |
946 | A>E | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001250860 rs1975945845 |
946 | A>S | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs1975945845 RCV001250848 |
946 | A>T | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
VAR_071608 rs267606857 CA250578 RCV000009953 |
949 | I>T | Cone-rod dystrophy 6 (cord6) Cone-rod dystrophy 6 CORD6 [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
rs1306952187 CA397954597 RCV001250849 |
950 | A>T | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV000084872 CA226101 rs61750181 RCV001250881 |
950 | A>V | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA226103 VAR_009135 RCV002514512 rs61750182 RCV000084873 RCV001075835 |
954 | L>P | Cone-rod dystrophy 6 Retinal dystrophy LCA1; severely impairs basal and GUCA1A induced guanylate cyclase [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
RCV001074581 rs780072959 CA397954661 |
954 | L>V | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP |
CA8366245 rs768417052 RCV001312864 |
959 | A>T | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV001250883 RCV001857414 RCV001073966 RCV000084874 rs61750183 |
967 | H>missing | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
RCV001208607 rs1975948376 |
968 | M>I | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs181567056 RCV000921018 CA8366252 CA397954917 |
973 | V>L | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs776083430 RCV000174835 CA240433 RCV002516648 |
974 | R>H | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001074931 rs1975949139 |
976 | R>C | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
RCV000714548 CA226107 RCV000084876 rs61750184 RCV000714550 RCV000714549 |
976 | R>L | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Choroidal dystrophy, central areolar, 1 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA8366258 RCV001250879 rs764954235 |
980 | H>L | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs1975956164 RCV001067300 |
984 | C>R | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV000985051 rs1598151437 |
993 | M>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs61750187 COSM1679541 RCV001250866 RCV000084879 CA226112 |
995 | R>W | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) haematopoietic_and_lymphoid_tissue [ClinVar, Ensembl, Cosmic] | Yes |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
rs1975957350 RCV001056225 |
996 | Y>* | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs1975957618 RCV001250852 |
999 | F>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV000989744 rs1598151461 CA397955289 |
1000 | G>E | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs150185423 RCV001053306 CA8366279 |
1005 | T>I | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
VAR_067182 | 1007 | S>L | LCA1 [UniProt] | Yes | UniProt |
RCV001075091 RCV000084881 RCV001250853 CA287534181 CA226116 RCV003156316 rs61750188 |
1009 | M>L | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) Retinal dystrophy [ClinVar, Ensembl] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs868612148 CA287534219 RCV001250854 RCV001879810 |
1013 | G>R | Cone-rod dystrophy 6 (cord6) Leber congenital amaurosis 1 Cone-rod dystrophy 6 Leber congenital amaurosis 1 (lca1) [Ensembl, ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA397955568 rs1429807175 RCV001250856 |
1019 | H>P | Leber congenital amaurosis 1 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA287534419 rs866511152 RCV001071718 |
1022 | L>* | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV000084884 rs281865411 RCV001250857 |
1027 | I>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
VAR_067183 | 1027 | I>IGI | LCA1 [UniProt] | Yes | UniProt |
RCV001083338 rs146149224 RCV000585411 CA240817 |
1033 | S>L | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs1555635925 RCV000504680 |
1034 | G>missing | Leber congenital amaurosis [ClinVar] | Yes |
ClinVar dbSNP |
RCV001342599 rs61750192 |
1036 | Q>K | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV002514513 RCV001250858 RCV000084889 rs61750194 CA226130 |
1040 | R>* | Leber congenital amaurosis 1 Cone-rod dystrophy 6 Leber congenital amaurosis 1 (lca1) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV001349545 rs1975964730 |
1041 | G>D | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001250873 rs1975971228 |
1055 | W>G | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
rs878853342 RCV000225447 CA10581704 |
1059 | R>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs878853342 RCV001320637 CA287534825 |
1059 | R>G | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs62641254 RCV001075612 RCV001360160 RCV000084891 CA226133 |
1061 | G>S | Cone-rod dystrophy 6 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001231078 rs1975972260 |
1063 | N>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001250859 rs1975973086 |
1071 | D>missing | Early-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
RCV001250880 rs1374426388 |
1074 | P>missing | Leber congenital amaurosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001346709 rs138869083 CA8366341 |
1074 | P>S | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001250817 RCV000055776 rs386834239 |
1079 | H>missing | Leber congenital amaurosis 1 Early-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
rs371919912 CA8366364 RCV001240481 |
1080 | G>R | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs779735498 RCV002546881 CA287535299 RCV001339738 |
1089 | E>K | Cone-rod dystrophy 6 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs769818541 RCV001388270 RCV001073763 CA8366374 |
1091 | R>* | Cone-rod dystrophy 6 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001230358 RCV002563182 CA287535371 rs746525316 |
1092 | R>W | Cone-rod dystrophy 6 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001325775 rs776624188 |
1098 | R>G | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinVar dbSNP |
rs776624188 RCV001213703 CA8366382 |
1098 | R>W | Cone-rod dystrophy 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
TCGA novel | 2 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs764072081 CA8365465 |
4 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397942339 rs1485169567 |
8 | A>V | No |
ClinGen TOPMed |
|
CA397942355 rs1262404909 |
9 | G>V | No |
ClinGen gnomAD |
|
CA397942368 rs1426615803 |
10 | G>A | No |
ClinGen gnomAD |
|
CA397942394 rs1421146833 |
12 | P>L | No |
ClinGen gnomAD |
|
CA397942387 rs1211177711 |
12 | P>S | No |
ClinGen TOPMed |
|
CA397942410 rs1373473769 |
13 | D>G | No |
ClinGen gnomAD |
|
rs954746846 CA287522833 |
15 | G>R | No |
ClinGen TOPMed |
|
rs1230201505 CA397942444 |
15 | G>V | No |
ClinGen TOPMed |
|
rs1008930073 CA287522840 |
17 | C>S | No |
ClinGen TOPMed gnomAD |
|
CA8365467 rs757041611 |
17 | C>Y | No |
ClinGen ExAC gnomAD |
|
rs1405042954 CA397942491 |
18 | G>D | No |
ClinGen gnomAD |
|
rs1598143702 CA397942505 |
19 | P>L | No |
ClinGen Ensembl |
|
rs1340479662 CA397942520 |
20 | A>G | No |
ClinGen TOPMed gnomAD |
|
rs1017601312 CA287522888 |
20 | A>S | No |
ClinGen Ensembl |
|
rs1340479662 CA397942523 |
20 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA287522907 rs926004217 |
21 | W>* | No |
ClinGen TOPMed gnomAD |
|
CA397942575 rs1244515419 |
23 | A>S | No |
ClinGen gnomAD |
|
rs1438692183 CA397942597 |
24 | P>L | No |
ClinGen gnomAD |
|
CA397942647 rs1391079477 |
28 | R>C | No |
ClinGen TOPMed |
|
TCGA novel | 28 | R>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 31 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA397942692 rs1484916911 |
31 | R>Q | No |
ClinGen gnomAD |
|
CA397942690 rs1285350603 |
31 | R>W | No |
ClinGen gnomAD |
|
rs781514479 CA8365470 |
34 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397942742 rs1423033093 |
35 | R>G | No |
ClinGen TOPMed gnomAD |
|
rs748156659 CA8365471 |
35 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1423033093 CA397942743 |
35 | R>W | No |
ClinGen TOPMed gnomAD |
|
rs1424853491 CA397942771 |
37 | P>Q | No |
ClinGen gnomAD |
|
rs1342972910 CA397942776 |
38 | L>F | No |
ClinGen gnomAD |
|
CA397942783 rs1316383527 |
39 | L>P | No |
ClinGen gnomAD |
|
CA397942793 rs1363193636 |
41 | L>P | No |
ClinGen gnomAD |
|
CA397942798 rs1201747201 |
42 | L>P | No |
ClinGen TOPMed |
|
rs1323015516 CA397942802 |
43 | L>F | No |
ClinGen TOPMed |
|
CA397942811 rs1247045218 |
45 | L>M | No |
ClinGen gnomAD |
|
CA397942816 rs1315271539 |
46 | Q>K | No |
ClinGen gnomAD |
|
rs1014118881 CA287522942 |
47 | P>L | No |
ClinGen TOPMed gnomAD |
|
rs1217957096 CA397942824 |
47 | P>S | No |
ClinGen gnomAD |
|
CA397942832 rs1244784258 |
48 | P>H | No |
ClinGen TOPMed gnomAD |
|
rs1201566039 CA397942831 |
48 | P>S | No |
ClinGen gnomAD |
|
CA8365476 rs774688311 |
49 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs760016257 CA8365477 |
50 | L>I | No |
ClinGen ExAC gnomAD |
|
rs1159129390 CA397942845 |
51 | S>P | No |
ClinGen TOPMed gnomAD |
|
CA397942847 rs1346332643 |
51 | S>Y | No |
ClinGen gnomAD |
|
CA397942856 rs1408825341 |
53 | V>L | No |
ClinGen gnomAD |
|
CA397942862 rs1453829975 |
54 | F>L | No |
ClinGen gnomAD |
|
rs1279191901 CA397942868 CA397942867 |
54 | F>L | No |
ClinGen gnomAD |
|
rs1307739817 CA397942875 |
56 | V>L | No |
ClinGen gnomAD |
|
rs1307739817 CA397942874 |
56 | V>M | No |
ClinGen gnomAD |
|
CA397942885 rs1264909187 |
57 | G>V | No |
ClinGen gnomAD |
|
rs1221661127 CA397942881 |
57 | G>W | No |
ClinGen gnomAD |
|
CA397942897 rs763697863 |
60 | G>C | No |
ClinGen ExAC gnomAD |
|
rs763697863 CA8365479 |
60 | G>S | No |
ClinGen ExAC gnomAD |
|
rs1423907063 CA397942908 |
62 | W>R | No |
ClinGen gnomAD |
|
rs1431996173 CA397942940 |
66 | P>S | No |
ClinGen TOPMed gnomAD |
|
rs1175145821 CA397942945 |
67 | I>V | No |
ClinGen TOPMed |
|
CA397942956 rs1470514403 |
68 | F>Y | No |
ClinGen gnomAD |
|
TCGA novel | 70 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA397942978 rs1444681966 |
72 | R>C | No |
ClinGen gnomAD |
|
rs987726980 CA287523044 |
72 | R>L | No |
ClinGen TOPMed gnomAD |
|
CA8365483 rs750153057 |
73 | P>Q | No |
ClinGen ExAC gnomAD |
|
rs750153057 CA397942985 |
73 | P>R | No |
ClinGen ExAC gnomAD |
|
CA397942983 rs1403174852 |
73 | P>S | No |
ClinGen gnomAD |
|
rs1228718314 CA397942999 |
76 | A>T | No |
ClinGen TOPMed |
|
rs1420394492 CA397943010 |
77 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA8365485 rs558294899 |
78 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8365486 rs752996693 |
80 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1200884939 CA397943039 |
83 | R>C | No |
ClinGen gnomAD |
|
rs1271710086 CA397943042 |
83 | R>H | No |
ClinGen gnomAD |
|
rs1167809648 CA397943062 |
87 | D>N | No |
ClinGen gnomAD |
|
rs1598143968 CA397943080 |
89 | G>A | No |
ClinGen Ensembl |
|
CA397943088 rs573367793 |
91 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8365488 rs749432012 |
93 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397943098 rs749432012 |
93 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397943114 rs1285198149 |
95 | R>L | No |
ClinGen gnomAD |
|
CA397943109 rs1267690378 |
95 | R>S | No |
ClinGen TOPMed |
|
CA8365489 rs771426657 |
96 | F>L | No |
ClinGen ExAC |
|
CA226105 rs61749667 RCV000084875 |
97 | E>Q | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1567957056 CA397943140 |
99 | A>V | No |
ClinGen Ensembl |
|
TCGA novel | 102 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA397943180 rs772514611 |
106 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8365491 rs772514611 |
106 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1363885483 CA397943189 |
108 | P>S | No |
ClinGen TOPMed gnomAD |
|
CA397943187 rs1363885483 |
108 | P>T | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 109 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1218251686 CA397943193 |
109 | G>S | No |
ClinGen gnomAD |
|
CA397943203 rs1290594016 |
110 | S>L | No |
ClinGen gnomAD |
|
CA8365492 rs774934785 |
112 | G>A | No |
ClinGen ExAC gnomAD |
|
CA397943213 rs774934785 |
112 | G>E | No |
ClinGen ExAC gnomAD |
|
rs61750198 CA226139 RCV000084895 |
114 | V>A | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1240857882 CA397943221 |
114 | V>M | No |
ClinGen TOPMed gnomAD |
|
rs1302252247 CA397943242 |
117 | A>V | No |
ClinGen TOPMed |
|
rs1238943129 CA397943250 |
119 | A>S | No |
ClinGen TOPMed gnomAD |
|
rs1187415637 CA397943257 |
120 | R>H | No |
ClinGen gnomAD |
|
CA397943260 rs1284617566 |
121 | V>M | No |
ClinGen Ensembl |
|
rs1598144053 CA397943274 |
123 | G>C | No |
ClinGen Ensembl |
|
CA397943289 rs1598144059 |
125 | V>G | No |
ClinGen Ensembl |
|
CA397943284 rs1422936516 |
125 | V>M | No |
ClinGen gnomAD |
|
CA397943290 rs1598144065 |
126 | G>C | No |
ClinGen Ensembl |
|
CA397943298 rs1165677649 |
127 | P>S | No |
ClinGen gnomAD |
|
CA397943305 rs1467903318 |
128 | V>G | No |
ClinGen TOPMed |
|
CA397943303 rs1598144076 |
128 | V>L | No |
ClinGen Ensembl |
|
CA397943351 rs1346829806 |
131 | A>E | No |
ClinGen TOPMed gnomAD |
|
rs544905777 CA397943433 |
136 | A>D | No |
ClinGen 1000Genomes gnomAD |
|
rs544905777 CA287523149 |
136 | A>G | No |
ClinGen 1000Genomes gnomAD |
|
rs544905777 CA287523153 |
136 | A>V | No |
ClinGen 1000Genomes gnomAD |
|
rs1555634588 CA397943469 |
138 | L>R | No |
ClinGen Ensembl |
|
rs786205499 CA235953 RCV000171249 |
139 | L>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA397943493 rs1315288867 |
140 | A>G | No |
ClinGen gnomAD |
|
TCGA novel | 140 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs563014439 CA287523183 |
141 | E>A | No |
ClinGen 1000Genomes |
|
rs1202782880 CA397943497 |
141 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1202782880 CA397943501 |
141 | E>Q | No |
ClinGen TOPMed gnomAD |
|
CA397943517 rs1188695303 |
142 | E>K | No |
ClinGen TOPMed |
|
rs1464376746 CA397943536 |
143 | A>S | No |
ClinGen TOPMed |
|
TCGA novel | 143 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs761448586 CA8365495 |
144 | G>R | No |
ClinGen ExAC gnomAD |
|
CA287523247 rs890569519 |
151 | G>D | No |
ClinGen TOPMed gnomAD |
|
rs773849840 CA287523239 |
151 | G>S | No |
ClinGen TOPMed gnomAD |
|
rs1369268347 CA397943710 |
154 | W>R | No |
ClinGen gnomAD |
|
CA287523249 rs996991243 |
155 | T>M | No |
ClinGen TOPMed gnomAD |
|
rs1469698027 CA397943754 |
156 | Q>* | No |
ClinGen gnomAD |
|
rs1156840437 CA397943783 |
157 | A>E | No |
ClinGen gnomAD |
|
rs1401257345 CA397943812 |
159 | G>D | No |
ClinGen gnomAD |
|
rs750399742 CA8365497 |
160 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397943844 rs1454369607 |
161 | T>M | No |
ClinGen TOPMed gnomAD |
|
rs890804991 CA287523263 |
162 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs200586401 CA397943873 |
163 | P>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs200586401 CA8365499 |
163 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1017653960 CA287523272 |
164 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA397943903 rs1229605900 |
165 | V>A | No |
ClinGen gnomAD |
|
CA397943914 rs1567957189 |
166 | T>I | No |
ClinGen Ensembl |
|
rs967607545 CA287523289 |
167 | P>S | No |
ClinGen TOPMed gnomAD |
|
rs756319569 CA397943935 |
168 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs756319569 CA8365501 |
168 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1437419643 CA397943950 |
169 | A>T | No |
ClinGen gnomAD |
|
rs1200912478 CA397943972 |
171 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA287523310 rs867412298 |
175 | L>R | No |
ClinGen Ensembl |
|
CA235955 rs786205500 RCV000171250 |
176 | L>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs779246332 CA8365505 |
177 | R>S | No |
ClinGen ExAC gnomAD |
|
rs746387733 CA8365506 |
178 | A>V | No |
ClinGen ExAC gnomAD |
|
CA397944073 COSM1209211 rs1335897916 |
180 | G>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
TCGA novel | 182 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA397944129 rs1283213579 |
183 | R>C | No |
ClinGen gnomAD |
|
rs1256991984 CA397944216 |
188 | T>I | No |
ClinGen gnomAD |
|
TCGA novel | 189 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs776470314 CA8365512 |
191 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs1555634640 | 191 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
rs61750199 CA8365515 |
193 | L>V | No |
ClinGen ExAC gnomAD |
|
CA397944332 rs1372337848 |
195 | V>M | No |
ClinGen gnomAD |
|
rs1370721862 CA397944404 |
199 | R>H | No |
ClinGen gnomAD |
|
rs1370721862 CA397944409 |
199 | R>L | No |
ClinGen gnomAD |
|
CA8365516 rs766286225 |
200 | S>L | No |
ClinGen ExAC gnomAD |
|
CA397944453 rs1180778956 |
202 | S>F | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 203 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1302566071 CA397944475 |
204 | A>T | No |
ClinGen gnomAD |
|
CA397944486 rs1413394994 |
204 | A>V | No |
ClinGen TOPMed |
|
rs765369504 CA8365522 |
208 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA287523387 rs908488035 |
209 | G>D | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 213 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1260958406 CA397944627 |
214 | S>F | No |
ClinGen gnomAD |
|
rs1194995551 CA397944652 |
216 | T>A | No |
ClinGen gnomAD |
|
rs747354016 CA8365526 |
216 | T>I | No |
ClinGen ExAC gnomAD |
|
rs1038239091 CA287523392 |
217 | S>F | No |
ClinGen TOPMed gnomAD |
|
rs1185443834 CA397944665 |
217 | S>P | No |
ClinGen TOPMed |
|
rs747809048 CA8365529 |
218 | M>I | No |
ClinGen ExAC gnomAD |
|
rs780953815 CA8365528 |
218 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs769129492 CA8365530 |
220 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8365532 rs748820854 |
223 | L>P | No |
ClinGen ExAC gnomAD |
|
CA8365533 rs770873775 |
227 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397944762 rs1366343667 |
227 | R>W | No |
ClinGen gnomAD |
|
rs774207880 CA8365534 |
229 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs774207880 CA397944790 |
229 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397944820 rs1361765968 |
231 | R>K | No |
ClinGen gnomAD |
|
CA8365535 rs759280279 |
231 | R>S | No |
ClinGen ExAC gnomAD |
|
CA397944850 rs1357666856 |
233 | V>F | No |
ClinGen TOPMed |
|
rs776773228 CA8365537 |
234 | R>P | No |
ClinGen ExAC gnomAD |
|
CA397944866 rs1484826655 |
234 | R>W | No |
ClinGen gnomAD |
|
rs1248462569 CA397944876 |
235 | D>N | No |
ClinGen TOPMed gnomAD |
|
rs1248462569 CA397944880 |
235 | D>Y | No |
ClinGen TOPMed gnomAD |
|
rs762006599 CA8365538 |
236 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1231782719 CA397944900 |
236 | G>R | No |
ClinGen TOPMed |
|
rs765439946 CA8365539 |
237 | P>H | No |
ClinGen ExAC gnomAD |
|
CA8365542 rs766859707 |
238 | R>G | No |
ClinGen ExAC gnomAD |
|
CA397944936 rs1324943722 |
238 | R>T | No |
ClinGen TOPMed |
|
rs1452310913 CA397944967 |
240 | T>K | No |
ClinGen gnomAD |
|
CA8365543 rs752141508 |
241 | A>P | No |
ClinGen ExAC gnomAD |
|
rs763047690 CA8365559 |
243 | I>T | No |
ClinGen ExAC gnomAD |
|
rs752057528 CA8365561 |
244 | M>I | No |
ClinGen ExAC gnomAD |
|
rs1323353453 CA397945041 |
244 | M>T | No |
ClinGen TOPMed |
|
rs141956583 CA397945036 |
244 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8365562 rs760107054 |
245 | V>A | No |
ClinGen ExAC TOPMed |
|
rs1203452310 CA397945047 |
245 | V>L | No |
ClinGen gnomAD |
|
rs1203452310 CA397945046 |
245 | V>M | No |
ClinGen gnomAD |
|
rs959135126 CA287523550 |
246 | M>L | No |
ClinGen TOPMed gnomAD |
|
CA397945054 rs1317367755 |
246 | M>T | No |
ClinGen TOPMed |
|
TCGA novel | 246 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA397945068 rs138922415 |
248 | S>* | Leber congenital amaurosis 1 (lca1) [Ensembl] | No |
ClinGen ESP ExAC TOPMed gnomAD |
rs1027644020 CA287523569 |
248 | S>T | No |
ClinGen Ensembl |
|
CA8365564 rs138922415 |
248 | S>W | Leber congenital amaurosis 1 (lca1) [Ensembl] | No |
ClinGen ESP ExAC TOPMed gnomAD |
CA397945070 rs1233349932 |
249 | V>M | No |
ClinGen gnomAD |
|
CA397945078 rs1394528966 |
250 | L>Q | No |
ClinGen TOPMed |
|
CA397945076 rs1454735214 |
250 | L>V | No |
ClinGen TOPMed |
|
rs1415396885 CA397945090 |
252 | G>A | No |
ClinGen TOPMed gnomAD |
|
rs1170008986 CA397945092 |
253 | G>S | No |
ClinGen gnomAD |
|
rs756730335 CA8365567 |
254 | E>* | Cone-rod dystrophy 6 (cord6) [Ensembl] | No |
ClinGen ExAC TOPMed gnomAD |
CA397945098 rs756730335 |
254 | E>K | Cone-rod dystrophy 6 (cord6) [Ensembl] | No |
ClinGen ExAC TOPMed gnomAD |
rs61749672 RCV000084904 CA226152 |
260 | L>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA8365569 rs745444949 |
263 | A>T | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 263 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs771962267 CA8365570 |
266 | L>V | No |
ClinGen ExAC gnomAD |
|
CA8365571 rs780014587 |
268 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs768365237 CA8365573 |
269 | T>S | No |
ClinGen ExAC gnomAD |
|
CA8365575 rs763099634 COSM985772 |
270 | D>N | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA397945404 rs763099634 |
270 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1343799941 RCV000658765 CA397945427 |
271 | G>A | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1343799941 CA397945425 |
271 | G>D | No |
ClinGen TOPMed gnomAD |
|
rs1458943458 CA397945513 |
277 | P>L | No |
ClinGen gnomAD |
|
CA8365577 rs774569101 |
277 | P>T | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 279 | D>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
COSM1494079 rs1478566225 CA397945537 |
279 | D>N | kidney Leber congenital amaurosis 1 (lca1) [Cosmic, Ensembl] | No |
ClinGen cosmic curated gnomAD |
RCV000996480 CA287523615 rs868557040 |
280 | T>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1186240682 CA397945558 |
280 | T>S | No |
ClinGen gnomAD |
|
CA8365584 rs756851759 |
284 | A>D | No |
ClinGen ExAC gnomAD |
|
rs558182614 CA8365582 |
284 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8365583 rs558182614 |
284 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs764905877 CA8365585 |
286 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749912018 CA8365586 |
287 | P>S | No |
ClinGen ExAC gnomAD |
|
rs757925587 CA8365587 |
288 | G>C | No |
ClinGen ExAC gnomAD |
|
CA397945717 rs1350341897 |
289 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1268161387 CA397945779 |
293 | A>D | No |
ClinGen gnomAD |
|
rs1451475360 CA397945783 |
294 | A>T | No |
ClinGen TOPMed |
|
rs374679518 CA8365590 |
296 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs374679518 CA397945828 |
296 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1005083528 CA287523648 |
296 | A>P | No |
ClinGen TOPMed gnomAD |
|
rs1005083528 COSM261217 CA397945820 |
296 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
rs573405328 CA8365591 |
297 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8365592 rs748043131 |
298 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1598144670 CA397945887 |
300 | Q>H | No |
ClinGen Ensembl |
|
rs1452652342 CA397945885 |
300 | Q>P | No |
ClinGen TOPMed gnomAD |
|
rs1452652342 CA397945883 |
300 | Q>R | No |
ClinGen TOPMed gnomAD |
|
CA8365594 rs774767443 |
302 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA8365595 rs745897683 |
302 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 303 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8365598 rs199931193 |
305 | H>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA397945918 rs1165027778 |
306 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA8365601 rs776826689 |
308 | V>E | No |
ClinGen ExAC gnomAD |
|
CA397946004 rs1316110664 |
311 | L>F | No |
ClinGen gnomAD |
|
CA397946000 rs1316110664 |
311 | L>I | No |
ClinGen gnomAD |
|
rs762211580 CA8365602 |
312 | T>A | No |
ClinGen ExAC gnomAD |
|
rs762211580 CA397946013 |
312 | T>P | No |
ClinGen ExAC gnomAD |
|
CA397946022 rs61749673 |
312 | T>R | Cone-rod dystrophy 6 (cord6) Leber congenital amaurosis 1 (lca1) [Ensembl] | No |
ClinGen ESP ExAC TOPMed gnomAD |
rs912346051 CA287523675 |
313 | R>L | No |
ClinGen TOPMed |
|
CA397946144 rs1355051733 |
319 | G>D | No |
ClinGen TOPMed |
|
CA8365605 rs765886731 |
321 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs754869603 CA8365607 |
322 | L>P | No |
ClinGen ExAC gnomAD |
|
rs1331668123 CA397946205 |
323 | D>N | No |
ClinGen gnomAD |
|
rs781230982 CA8365608 |
324 | S>N | No |
ClinGen ExAC gnomAD |
|
VAR_067172 | 325 | L>R | found in a patient with LCA1 [UniProt] | No | UniProt |
CA397946254 COSM1387545 rs1431677230 |
326 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
CA397946255 rs1440873587 |
326 | R>H | No |
ClinGen gnomAD |
|
CA397946265 rs1477347275 |
327 | R>K | No |
ClinGen gnomAD |
|
CA287523686 rs56280231 VAR_042229 |
328 | A>V | No |
ClinGen UniProt Ensembl dbSNP |
|
CA397946336 rs34596269 |
331 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1238175424 CA397946344 |
331 | R>H | No |
ClinGen gnomAD |
|
rs1238175424 CA397946346 COSM145470 |
331 | R>P | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA397946361 rs1156744504 |
332 | R>L | No |
ClinGen gnomAD |
|
CA8365610 rs755999834 |
333 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397946369 rs755999834 |
333 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397946404 rs1403592744 |
335 | P>S | No |
ClinGen gnomAD |
|
CA287523714 rs925640953 |
336 | S>Y | No |
ClinGen Ensembl |
|
rs1397466363 CA397946455 |
339 | N>S | No |
ClinGen TOPMed gnomAD |
|
CA397946453 rs1397466363 |
339 | N>T | No |
ClinGen TOPMed gnomAD |
|
CA8365612 rs374507808 |
340 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
TCGA novel | 343 | V>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA397947612 rs768812125 |
344 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs755696904 CA397947614 |
345 | P>A | No |
ClinGen ExAC gnomAD |
|
rs755696904 CA8365636 |
345 | P>S | No |
ClinGen ExAC gnomAD |
|
rs1199244967 CA397947619 |
346 | L>V | No |
ClinGen gnomAD |
|
rs1170075010 CA397947635 |
348 | G>D | No |
ClinGen TOPMed gnomAD |
|
CA8365639 rs773563136 |
352 | D>H | No |
ClinGen ExAC gnomAD |
|
CA397947667 rs1326185933 |
353 | A>E | No |
ClinGen TOPMed gnomAD |
|
rs774420737 CA287524561 |
353 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA397947668 rs1326185933 |
353 | A>V | No |
ClinGen TOPMed gnomAD |
|
rs758931689 CA397947671 |
354 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8365643 rs758931689 |
354 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8365644 rs767060337 |
355 | F>L | No |
ClinGen ExAC gnomAD |
|
CA397947694 rs1263635741 |
358 | A>T | No |
ClinGen gnomAD |
|
CA397947699 rs1489401308 |
358 | A>V | No |
ClinGen gnomAD |
|
rs201541863 CA8365646 |
360 | G>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA287524616 rs61749677 |
362 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA8365649 rs141917297 |
365 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA287524622 rs1020962459 |
366 | A>G | No |
ClinGen gnomAD |
|
CA397947737 rs1162040179 |
366 | A>T | No |
ClinGen gnomAD |
|
CA397947741 rs1020962459 |
366 | A>V | No |
ClinGen gnomAD |
|
rs1164328257 CA397947743 |
367 | A>D | No |
ClinGen gnomAD |
|
rs754954638 CA287524629 |
367 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs754954638 CA8365651 |
367 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8365653 rs146031822 |
368 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
rs1322820848 CA397947751 |
369 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs770255396 CA397947777 CA8365655 |
372 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749607771 CA8365657 |
374 | S>P | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 375 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs773811368 CA8365659 |
375 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA8365660 rs745551727 |
376 | A>T | No |
ClinGen ExAC gnomAD |
|
CA397947802 rs984277862 |
377 | A>D | No |
ClinGen TOPMed gnomAD |
|
CA287524671 rs984277862 |
377 | A>V | No |
ClinGen TOPMed gnomAD |
|
rs1598146013 CA397947808 |
378 | V>G | No |
ClinGen Ensembl |
|
CA397947815 rs1460624299 |
379 | A>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs760307098 CA8365664 |
380 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs760307098 CA397947819 |
380 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs760307098 CA397947818 |
380 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397947834 rs776042543 |
382 | I>M | No |
ClinGen gnomAD |
|
CA397947832 rs1321356179 |
382 | I>T | No |
ClinGen TOPMed |
|
rs1465775351 CA397947842 |
384 | D>E | No |
ClinGen gnomAD |
|
rs761445993 CA8365667 |
384 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs776737538 COSM1709764 CA8365666 |
384 | D>N | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA287524701 rs994991105 |
386 | Q>E | No |
ClinGen TOPMed |
|
CA8365672 rs752751984 |
388 | P>L | No |
ClinGen ExAC gnomAD |
|
CA8365671 rs767768129 |
388 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397947888 rs1159914437 |
392 | G>R | No |
ClinGen TOPMed |
|
rs1598146079 CA397947898 |
393 | D>G | No |
ClinGen Ensembl |
|
CA397947895 rs1419826982 |
393 | D>Y | No |
ClinGen TOPMed |
|
CA8365674 rs756210907 |
397 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1027365741 CA287524717 |
397 | D>G | No |
ClinGen TOPMed |
|
CA397947919 rs1257323097 |
397 | D>N | No |
ClinGen gnomAD |
|
CA8365676 rs377021127 |
398 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
CA8365677 rs757508954 |
399 | E>D | No |
ClinGen ExAC gnomAD |
|
CA397947932 rs1251769393 |
399 | E>K | No |
ClinGen gnomAD |
|
rs779327088 CA8365678 |
400 | P>S | No |
ClinGen ExAC gnomAD |
|
CA397947948 rs1413237485 |
401 | P>L | No |
ClinGen gnomAD |
|
rs1190476854 CA397947950 |
402 | F>I | No |
ClinGen TOPMed |
|
CA8365680 rs560366032 |
403 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
COSM1730188 CA397947958 rs1245251228 |
403 | V>M | liver Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
rs1361057788 CA397947971 |
405 | L>P | No |
ClinGen TOPMed gnomAD |
|
CA397947975 rs1466640514 |
406 | D>N | No |
ClinGen TOPMed gnomAD |
|
rs775299640 CA8365681 |
407 | T>A | No |
ClinGen ExAC gnomAD |
|
rs377650196 CA8365682 |
407 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs865899393 CA287524756 |
408 | D>N | No |
ClinGen Ensembl |
|
CA287524761 rs144565168 |
409 | A>T | No |
ClinGen ESP |
|
rs761796768 CA8365685 |
409 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA287524789 rs773030462 |
410 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773030462 CA397948003 |
410 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA287524785 rs1036028583 |
410 | A>T | No |
ClinGen gnomAD |
|
rs1386618291 CA397948012 |
411 | G>R | No |
ClinGen TOPMed |
|
rs976953564 CA287524790 |
412 | D>N | No |
ClinGen TOPMed gnomAD |
|
CA8365689 rs531612488 COSM1679539 |
413 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
rs1189799607 CA397948069 |
415 | F>L | No |
ClinGen gnomAD |
|
rs764174190 CA8365691 |
415 | F>S | No |
ClinGen ExAC |
|
CA8365692 rs753928228 |
417 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1168181797 CA397948108 |
418 | Y>* | No |
ClinGen TOPMed gnomAD |
|
rs550107422 CA8365693 |
418 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1388468307 CA397948110 |
419 | M>L | No |
ClinGen gnomAD |
|
CA397948121 rs1567958449 |
420 | L>V | No |
ClinGen Ensembl |
|
rs1308574050 CA397948127 |
421 | D>Y | No |
ClinGen gnomAD |
|
rs1378193575 CA397948144 |
423 | A>T | No |
ClinGen TOPMed |
|
CA287524819 rs760766230 |
424 | R>Q | No |
ClinGen TOPMed gnomAD |
|
COSM1209213 rs868112359 CA287524813 |
424 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA397948208 rs1227290945 |
428 | L>F | No |
ClinGen gnomAD |
|
rs868358206 CA287524839 |
429 | S>F | No |
ClinGen gnomAD |
|
rs147586061 CA397948234 |
430 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8365699 rs147586061 |
430 | A>T | Variant assessed as Somatic; 4.842e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA397948247 VAR_042230 rs1451501407 |
431 | G>D | a metastatic melanoma sample; somatic mutation [UniProt] | No |
ClinGen UniProt dbSNP gnomAD |
CA287524872 rs368557900 COSM3773341 |
431 | G>S | pancreas [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs1261423606 CA397948262 |
432 | T>S | No |
ClinGen TOPMed gnomAD |
|
rs144151076 CA8365702 COSM1387547 |
433 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
CA287524891 rs769749617 |
433 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA397948275 rs1188169226 |
434 | M>K | No |
ClinGen gnomAD |
|
CA397948272 rs1489007083 |
434 | M>L | No |
ClinGen gnomAD |
|
CA397948287 rs762771301 |
435 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8365703 rs762771301 |
435 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1169255860 CA397948301 |
436 | F>L | No |
ClinGen gnomAD |
|
rs1218797620 CA397948309 |
436 | F>L | No |
ClinGen TOPMed |
|
rs1413127106 CA397948316 |
437 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA397948336 rs151330485 |
438 | R>L | No |
ClinGen ESP ExAC gnomAD |
|
CA8365707 rs151330485 |
438 | R>P | No |
ClinGen ESP ExAC gnomAD |
|
CA397948349 rs1402786362 |
439 | G>V | No |
ClinGen TOPMed |
|
TCGA novel | 440 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1435233031 CA397948357 |
440 | G>E | No |
ClinGen gnomAD |
|
CA8365711 rs750895890 |
440 | G>R | No |
ClinGen ExAC gnomAD |
|
CA8365712 rs758775976 |
441 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs752037112 CA8365714 |
443 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1171134387 CA397948396 |
444 | G>R | No |
ClinGen TOPMed |
|
rs1478267007 CA397948412 |
445 | P>S | No |
ClinGen TOPMed |
|
rs1335925709 CA397948441 |
447 | P>H | No |
ClinGen TOPMed gnomAD |
|
CA397948445 rs1335925709 |
447 | P>L | No |
ClinGen TOPMed gnomAD |
|
rs1246455684 CA397948471 |
449 | C>W | No |
ClinGen gnomAD |
|
CA8365717 rs769219806 |
452 | D>G | No |
ClinGen ExAC gnomAD |
|
rs776845104 COSM437762 CA8365716 |
452 | D>N | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs776845104 CA397948509 |
452 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8365718 rs777700238 |
453 | P>L | No |
ClinGen ExAC gnomAD |
|
rs117853745 CA397948601 |
458 | G>C | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
rs117853745 CA287525052 |
458 | G>S | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
CA397948619 rs1156640453 |
459 | G>E | No |
ClinGen gnomAD |
|
rs1323099555 CA397948672 |
462 | E>* | No |
ClinGen TOPMed |
|
CA397948680 rs1260656548 |
463 | P>S | No |
ClinGen gnomAD |
|
CA397948690 rs1253873238 |
464 | G>D | No |
ClinGen TOPMed gnomAD |
|
CA397948686 rs1203022415 |
464 | G>S | No |
ClinGen gnomAD |
|
CA397948704 rs1298892054 |
465 | L>R | No |
ClinGen TOPMed |
|
CA287525259 rs771764405 |
466 | V>F | No |
ClinGen ExAC gnomAD |
|
CA8365740 rs771764405 |
466 | V>I | No |
ClinGen ExAC gnomAD |
|
rs771764405 CA8365739 |
466 | V>L | No |
ClinGen ExAC gnomAD |
|
rs1406502907 CA397948742 |
468 | L>P | No |
ClinGen TOPMed |
|
rs748301943 CA8365741 |
469 | G>S | No |
ClinGen ExAC gnomAD |
|
rs1478819668 CA397948792 |
472 | L>P | No |
ClinGen TOPMed gnomAD |
|
CA397948803 rs1389017077 |
473 | V>A | No |
ClinGen gnomAD |
|
CA8365742 rs770119513 |
473 | V>M | No |
ClinGen ExAC gnomAD |
|
CA397948808 rs1427252897 |
474 | V>I | No |
ClinGen TOPMed gnomAD |
|
CA397948825 rs1306782149 |
475 | G>E | No |
ClinGen gnomAD |
|
rs867041083 CA287525288 |
475 | G>R | No |
ClinGen Ensembl |
|
CA287525295 rs960653636 |
476 | M>L | No |
ClinGen TOPMed |
|
CA8365743 rs773394059 |
477 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV000084833 rs61749681 |
478 | L>missing | No |
ClinVar dbSNP |
|
CA8365745 rs766944930 |
478 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1329658619 CA397948879 |
480 | G>R | No |
ClinGen gnomAD |
|
CA8365746 rs572166519 |
482 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
CA8365748 rs767788419 |
484 | A>D | No |
ClinGen ExAC gnomAD |
|
rs1341621993 CA397948926 |
484 | A>S | No |
ClinGen gnomAD |
|
rs753166496 CA8365749 |
485 | H>L | No |
ClinGen ExAC gnomAD |
|
CA287525380 rs771288323 |
486 | Y>C | No |
ClinGen Ensembl |
|
CA8365750 rs145060888 |
486 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA397949057 rs753488664 |
490 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397949054 rs1187537253 |
490 | R>W | No |
ClinGen TOPMed gnomAD |
|
CA397949067 rs1463384120 |
491 | L>P | No |
ClinGen gnomAD |
|
CA397949106 rs1290788423 |
494 | M>K | No |
ClinGen TOPMed gnomAD |
|
CA397949108 rs1290788423 |
494 | M>T | No |
ClinGen TOPMed gnomAD |
|
CA8365774 rs749999803 |
494 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8365775 rs767360120 |
497 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397949157 rs1598146819 |
497 | V>G | No |
ClinGen Ensembl |
|
rs767360120 CA397949150 |
497 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs751263915 CA397949169 |
499 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs200211315 CA397949178 |
500 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1479771628 CA397949184 |
501 | N>K | No |
ClinGen TOPMed |
|
rs749535904 CA8365779 |
501 | N>S | No |
ClinGen ExAC TOPMed |
|
rs1287511242 CA397949220 |
504 | I>T | No |
ClinGen gnomAD |
|
CA8365783 rs200651999 |
508 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA287525647 rs548756390 |
508 | D>G | No |
ClinGen 1000Genomes |
|
COSM179952 rs760877146 CA8365784 |
509 | D>N | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA397949319 rs1189197351 |
511 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA8365787 rs764907748 |
515 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs764907748 CA8365788 |
515 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397949384 rs1345987699 |
516 | H>R | No |
ClinGen TOPMed gnomAD |
|
rs762546467 CA8365789 |
518 | G>A | No |
ClinGen ExAC gnomAD |
|
rs762546467 CA397949410 |
518 | G>D | No |
ClinGen ExAC gnomAD |
|
CA287525675 rs537729498 |
518 | G>S | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
rs1198818689 CA397949415 |
519 | T>P | No |
ClinGen gnomAD |
|
rs751520851 CA8365791 |
521 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs200189360 CA8365792 |
522 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8365815 rs201383207 |
523 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
CA397949530 rs1396113188 |
524 | A>T | No |
ClinGen TOPMed |
|
rs1168076308 CA397949545 |
525 | Q>K | Cone-rod dystrophy 6 (cord6) [Ensembl] | No |
ClinGen gnomAD |
TCGA novel | 527 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1170982522 CA397949581 |
527 | S>N | No |
ClinGen gnomAD |
|
rs755454531 CA8365818 |
527 | S>R | No |
ClinGen ExAC gnomAD |
|
rs781678909 CA8365819 |
528 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397949623 rs1385973926 |
530 | S>I | No |
ClinGen TOPMed |
|
rs1371237338 CA397949638 |
531 | L>P | No |
ClinGen gnomAD |
|
CA8365822 rs553602736 |
532 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397949644 rs1294796413 |
532 | G>S | No |
ClinGen gnomAD |
|
rs748946901 CA8365823 |
533 | A>V | No |
ClinGen ExAC gnomAD |
|
rs1274312758 CA397949667 |
534 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs530209613 CA287525969 |
534 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs530209613 CA8365824 |
534 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA287525984 rs1021967605 |
535 | S>N | No |
ClinGen gnomAD |
|
CA397949684 rs1275399285 |
535 | S>R | No |
ClinGen gnomAD |
|
rs1021967605 CA397949680 |
535 | S>T | No |
ClinGen gnomAD |
|
rs1469093409 CA397949692 CA397949689 |
536 | M>L | No |
ClinGen gnomAD |
|
CA8365825 rs773905916 |
536 | M>T | No |
ClinGen ExAC gnomAD |
|
CA226050 rs61749753 RCV000084837 |
539 | I>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA397949752 rs372005126 |
540 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs372005126 CA8365827 |
540 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs758645364 CA8365831 |
543 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1243599161 CA397949852 |
549 | S>G | No |
ClinGen TOPMed |
|
rs748509676 CA287526028 |
549 | S>R | No |
ClinGen gnomAD |
|
CA397949867 rs1318040273 |
550 | P>S | No |
ClinGen gnomAD |
|
rs1355845478 CA397950411 |
556 | E>D | No |
ClinGen TOPMed |
|
COSM135736 CA397950423 rs1184024632 |
557 | G>R | Variant assessed as Somatic; impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
rs1258120298 CA397950440 |
559 | R>K | No |
ClinGen gnomAD |
|
CA397950456 rs1482632384 |
561 | W>C | No |
ClinGen gnomAD |
|
TCGA novel | 563 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs546875049 CA8365856 |
567 | G>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs756639026 CA8365855 |
567 | G>R | No |
ClinGen ExAC gnomAD |
|
CA397950501 rs1422530580 |
568 | D>E | No |
ClinGen gnomAD |
|
rs754170292 CA8365857 |
568 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs754170292 CA397950496 |
568 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1171568372 CA397950499 |
568 | D>V | No |
ClinGen gnomAD |
|
rs933462730 CA287526879 |
570 | H>Y | No |
ClinGen Ensembl |
|
rs886043672 CA10605808 RCV000294469 |
571 | I>M | No |
ClinGen ClinVar dbSNP gnomAD |
|
CA287526884 rs951042742 |
571 | I>V | No |
ClinGen TOPMed |
|
CA8365859 rs778664525 |
572 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs61749756 CA397950527 |
573 | I>L | Cone-rod dystrophy 6 (cord6) [Ensembl] | No |
ClinGen ExAC TOPMed gnomAD |
rs137853897 CA397950534 |
574 | R>G | Cone-rod dystrophy 6 (cord6) [Ensembl] | No |
ClinGen ESP ExAC TOPMed gnomAD |
rs137853897 CA397950533 |
574 | R>S | Cone-rod dystrophy 6 (cord6) [Ensembl] | No |
ClinGen ESP ExAC TOPMed gnomAD |
CA397950538 rs1274478930 |
575 | P>A | No |
ClinGen TOPMed gnomAD |
|
rs1274478930 CA397950539 |
575 | P>S | No |
ClinGen TOPMed gnomAD |
|
CA397950567 rs1280999882 |
579 | T>M | No |
ClinGen gnomAD |
|
rs1360352993 CA397951136 |
584 | L>F | No |
ClinGen gnomAD |
|
CA8365890 rs776817542 |
585 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8365891 rs762226529 |
585 | Q>H | No |
ClinGen ExAC gnomAD |
|
CA397951177 rs1463217574 |
586 | E>G | No |
ClinGen gnomAD |
|
CA397951167 rs1392669245 |
586 | E>K | No |
ClinGen TOPMed gnomAD |
|
rs200241218 CA8365893 |
587 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM3764644 CA287530833 rs940175403 |
588 | R>W | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs1297688404 CA397951211 |
589 | H>Q | No |
ClinGen gnomAD |
|
rs1326988866 CA397951215 |
590 | E>K | No |
ClinGen gnomAD |
|
rs373362030 CA8365895 |
592 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs373362030 CA397951245 |
592 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs754709344 CA8365897 |
593 | A>S | No |
ClinGen ExAC gnomAD |
|
CA8365899 rs780537281 |
596 | L>P | No |
ClinGen ExAC gnomAD |
|
rs780537281 CA8365898 |
596 | L>Q | No |
ClinGen ExAC gnomAD |
|
rs867266072 CA287530846 |
597 | G>E | No |
ClinGen Ensembl |
|
CA397951318 rs1270430352 |
598 | L>I | No |
ClinGen TOPMed |
|
rs1448100751 CA397951336 |
599 | F>L | No |
ClinGen TOPMed gnomAD |
|
CA8365901 rs777699097 |
600 | L>M | No |
ClinGen ExAC gnomAD |
|
rs749012764 CA8365902 COSM3820968 |
601 | A>V | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA8365904 rs770740012 |
602 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs747173302 CA397951357 |
602 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs747173302 CA8365905 |
602 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs943953143 CA8365906 |
603 | G>A | No |
ClinGen TOPMed |
|
CA287530875 rs943953143 |
603 | G>E | No |
ClinGen TOPMed |
|
rs1165992040 CA397951379 |
604 | A>V | No |
ClinGen gnomAD |
|
CA8365908 rs768994065 |
606 | G>R | No |
ClinGen ExAC gnomAD |
|
CA8365910 rs761968706 |
608 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397951426 rs1244476010 |
608 | A>V | No |
ClinGen Ensembl |
|
CA287530915 rs779224998 |
610 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397951455 rs1488598534 |
611 | W>* | No |
ClinGen gnomAD |
|
CA397951463 rs1233647883 |
611 | W>C | No |
ClinGen TOPMed gnomAD |
|
rs1240090695 CA397951485 |
613 | G>R | No |
ClinGen gnomAD |
|
CA287530922 rs763362455 |
615 | L>V | No |
ClinGen ExAC gnomAD |
|
rs1257463885 CA397951531 |
616 | A>V | No |
ClinGen TOPMed |
|
rs1343672479 CA397951543 |
617 | V>A | No |
ClinGen gnomAD |
|
CA8365915 rs751995887 |
617 | V>L | No |
ClinGen ExAC gnomAD |
|
rs752088799 CA287530935 |
621 | H>N | No |
ClinGen ExAC gnomAD |
|
rs752088799 CA8365918 |
621 | H>Y | No |
ClinGen ExAC gnomAD |
|
rs1189135118 CA397951619 |
622 | C>F | No |
ClinGen gnomAD |
|
CA8365919 rs370742162 |
623 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8365920 rs370742162 |
623 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8365926 rs768706642 |
625 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs768706642 CA8365925 |
625 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397951676 rs1294640267 |
628 | Q>E | No |
ClinGen TOPMed |
|
rs567708710 CA287531000 |
632 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs567708710 CA8365931 COSM173309 |
632 | A>T | large_intestine Variant assessed as Somatic; 4.621e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
rs774564791 CA8365932 |
632 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397951712 rs1411356446 |
633 | Q>H | No |
ClinGen TOPMed |
|
CA287531016 rs767009640 |
639 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8365934 rs767009640 |
639 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397951809 rs1420799791 |
640 | W>C | No |
ClinGen TOPMed gnomAD |
|
rs1281795950 CA397951799 |
640 | W>R | No |
ClinGen gnomAD |
|
CA397951825 rs1167136644 |
641 | M>I | No |
ClinGen TOPMed |
|
rs1462063004 CA397951842 |
642 | F>L | No |
ClinGen TOPMed |
|
rs760126540 CA8365936 |
649 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397951943 rs1251109440 |
651 | I>V | No |
ClinGen gnomAD |
|
rs139168077 CA287531141 |
653 | G>E | No |
ClinGen ESP TOPMed |
|
RCV000084846 rs61750160 CA226060 |
653 | G>R | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA8365957 rs765048134 |
654 | I>T | No |
ClinGen ExAC gnomAD |
|
rs750399947 CA8365959 |
655 | R>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750399947 CA397952044 |
655 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8365960 rs779870173 |
659 | H>R | No |
ClinGen ExAC gnomAD |
|
rs1250667402 CA397952095 |
659 | H>Y | No |
ClinGen TOPMed |
|
rs1360525092 CA397952122 |
661 | G>D | No |
ClinGen gnomAD |
|
CA8365963 rs749314383 |
663 | A>T | No |
ClinGen ExAC gnomAD |
|
CA397952159 rs1238251797 |
664 | H>R | No |
ClinGen gnomAD |
|
rs147166962 CA8365965 |
666 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 667 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
COSM268497 rs369222553 CA8365967 |
670 | R>Q | Cone-rod dystrophy 6 (cord6) large_intestine [Ensembl, Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
CA397952281 rs1416982503 |
673 | I>M | No |
ClinGen TOPMed gnomAD |
|
rs747391169 CA8365969 |
677 | R>K | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 677 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA397952346 rs1291909840 |
678 | F>C | No |
ClinGen TOPMed |
|
CA397952351 rs776298636 |
678 | F>L | No |
ClinGen ExAC gnomAD |
|
rs377557911 CA8365972 |
679 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 679 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8365973 rs192306625 |
681 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA287531258 rs935195316 |
684 | D>E | No |
ClinGen TOPMed gnomAD |
|
rs1282252899 CA397952479 |
688 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA8365979 rs144291605 |
688 | G>R | Cone-rod dystrophy 6 (cord6) [Ensembl] | No |
ClinGen ESP ExAC TOPMed gnomAD |
CA8365980 rs754134176 |
689 | R>S | No |
ClinGen ExAC gnomAD |
|
RCV000084849 rs61750163 |
693 | A>missing | No |
ClinVar dbSNP |
|
rs35146471 CA8365983 VAR_042232 |
693 | A>E | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
CA8365985 rs61750164 |
694 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs61750164 CA8365984 |
694 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA226066 rs61750164 RCV000084850 |
694 | Q>K | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1237783733 CA397952564 |
695 | K>R | No |
ClinGen TOPMed gnomAD |
|
rs1598149266 CA397952579 |
696 | V>G | No |
ClinGen Ensembl |
|
CA8365989 rs200128473 |
698 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8365987 rs747338144 |
698 | P>S | No |
ClinGen ExAC gnomAD |
|
CA287531372 rs370318503 |
700 | P>R | No |
ClinGen ESP TOPMed |
|
CA397952633 rs1598149293 |
701 | P>L | No |
ClinGen Ensembl |
|
CA287531373 rs1003191126 |
702 | R>G | No |
ClinGen TOPMed |
|
rs1375409540 CA397952642 |
702 | R>I | No |
ClinGen TOPMed gnomAD |
|
CA397952638 rs1375409540 |
702 | R>K | No |
ClinGen TOPMed gnomAD |
|
rs577880164 CA397952657 |
703 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1270111845 CA397952648 |
703 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA8365992 rs142997995 |
704 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA397952675 rs1434526446 |
705 | D>H | No |
ClinGen TOPMed |
|
rs1466341797 CA397952743 |
706 | Q>K | No |
ClinGen gnomAD |
|
CA8366016 rs775339427 |
707 | L>M | No |
ClinGen ExAC gnomAD |
|
CA397952764 rs1201943069 |
709 | T>A | No |
ClinGen gnomAD |
|
rs763214827 CA8366020 |
713 | L>M | No |
ClinGen ExAC gnomAD |
|
CA8366021 rs766418873 |
714 | L>R | No |
ClinGen ExAC gnomAD |
|
rs755464893 CA8366023 |
716 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8366024 rs373767265 |
717 | P>A | No |
ClinGen ESP ExAC gnomAD |
|
CA8366026 rs756464199 |
719 | L>P | No |
ClinGen ExAC gnomAD |
|
rs756464199 CA287531975 |
719 | L>R | No |
ClinGen ExAC gnomAD |
|
rs777432099 CA8366027 |
721 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs141352623 CA8366028 |
721 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs141352623 CA287531993 |
721 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs745426085 CA8366031 |
722 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA397952841 rs1478344849 |
723 | G>E | No |
ClinGen gnomAD |
|
rs561318435 CA8366033 |
724 | T>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1459595665 CA397952853 |
726 | A>T | No |
ClinGen gnomAD |
|
rs759619180 CA8366040 |
729 | V>I | No |
ClinGen ExAC gnomAD |
|
CA397952878 rs1291164005 |
730 | F>V | No |
ClinGen TOPMed gnomAD |
|
CA397952901 rs1336520916 |
733 | A>S | No |
ClinGen TOPMed gnomAD |
|
rs202094105 CA8366041 |
734 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs764334726 CA8366044 |
736 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs756693094 CA8366043 |
736 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs35616384 CA287532082 |
740 | V>L | No |
ClinGen Ensembl |
|
CA8366046 rs138176835 |
742 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA397952963 rs138176835 |
742 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8366047 rs778719428 |
743 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 744 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8366049 rs757871358 |
745 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1188502787 CA397952979 |
745 | P>S | No |
ClinGen gnomAD |
|
CA226070 rs61750166 RCV000084853 |
746 | Y>C | No |
ClinGen ClinVar dbSNP gnomAD |
|
CA397952989 rs1160429343 |
747 | A>T | No |
ClinGen gnomAD |
|
rs779666069 CA8366050 |
747 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV000084854 rs61750167 CA226072 |
750 | E>* | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs1315548077 CA397953017 |
751 | L>F | No |
ClinGen TOPMed |
|
CA397953016 rs1315548077 |
751 | L>V | No |
ClinGen TOPMed |
|
CA8366053 rs776278329 |
752 | T>I | No |
ClinGen ExAC gnomAD |
|
rs1305834204 CA397953021 |
752 | T>P | No |
ClinGen gnomAD |
|
rs747951577 CA397953032 |
754 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs771077016 CA8366055 |
755 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397953071 rs1598149983 |
758 | Q>E | No |
ClinGen Ensembl |
|
rs775415473 CA8366076 |
758 | Q>P | No |
ClinGen ExAC gnomAD |
|
COSM1303499 rs764439180 CA8366078 |
761 | R>Q | Cone-rod dystrophy 6 (cord6) Variant assessed as Somatic; 9.288e-05 impact. urinary_tract [Ensembl, NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA8366080 rs777306136 |
762 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1331595576 CA397953100 |
763 | P>A | No |
ClinGen gnomAD |
|
rs1331595576 CA397953102 |
763 | P>S | No |
ClinGen gnomAD |
|
CA8366082 rs61750168 |
768 | R>G | Cone-rod dystrophy 6 (cord6) Leber congenital amaurosis 1 (lca1) [Ensembl] | No |
ClinGen ESP ExAC TOPMed gnomAD |
rs61750169 CA226076 RCV000084857 |
773 | M>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs750967765 CA8366086 |
775 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA397953185 rs1211934880 |
777 | P>T | No |
ClinGen gnomAD |
|
CA397953191 rs1488769863 |
778 | V>I | No |
ClinGen gnomAD |
|
RCV000478042 CA16620649 rs541299023 |
779 | E>* | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA8366090 rs541299023 |
779 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
rs1187359735 CA397953206 |
780 | C>Y | No |
ClinGen Ensembl |
|
CA8366091 rs777539780 |
781 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8366092 rs749164572 |
782 | L>F | No |
ClinGen ExAC gnomAD |
|
rs1166312966 CA397953225 |
783 | L>R | No |
ClinGen gnomAD |
|
rs375010731 CA8366095 |
784 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1160645425 CA397953227 |
784 | M>V | No |
ClinGen TOPMed |
|
CA397953256 rs1176787837 |
787 | C>W | No |
ClinGen TOPMed |
|
CA397953254 rs1338964872 |
787 | C>Y | No |
ClinGen gnomAD |
|
CA8366097 rs776893288 |
791 | Q>* | No |
ClinGen ExAC gnomAD |
|
rs763774686 CA8366098 |
792 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs763774686 CA397953290 |
792 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763381837 CA8366101 |
793 | E>D | No |
ClinGen ExAC gnomAD |
|
CA226080 rs61750171 RCV000084859 |
795 | R>L | Leber congenital amaurosis 1 (lca1) [Ensembl] | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs765910207 CA8366102 |
795 | R>W | No |
ClinGen ExAC gnomAD |
|
CA397953312 rs1304876088 |
796 | P>L | No |
ClinGen gnomAD |
|
TCGA novel | 800 | H>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA397953336 rs1489210233 |
800 | H>Y | No |
ClinGen gnomAD |
|
rs1256474218 CA397953346 |
801 | T>A | No |
ClinGen gnomAD |
|
CA8366105 rs766981529 |
801 | T>N | No |
ClinGen ExAC gnomAD |
|
CA397953353 rs1413957506 |
802 | F>S | No |
ClinGen TOPMed gnomAD |
|
CA397953363 rs756031378 |
803 | D>E | No |
ClinGen ExAC gnomAD |
|
CA397953358 rs752269926 |
803 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8366106 rs752269926 |
803 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397953386 rs1342656044 |
805 | F>S | No |
ClinGen gnomAD |
|
CA397953383 rs1302556013 |
805 | F>V | No |
ClinGen TOPMed gnomAD |
|
CA397953399 rs1220768873 |
807 | N>D | No |
ClinGen gnomAD |
|
CA287532888 rs199828903 |
808 | I>M | No |
ClinGen 1000Genomes gnomAD |
|
CA287532877 rs373615436 |
808 | I>S | No |
ClinGen ESP TOPMed |
|
rs1436874837 CA397953412 |
809 | N>D | No |
ClinGen gnomAD |
|
CA8366131 rs750247123 |
811 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8366132 rs201388569 |
812 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs894774212 CA397953432 |
812 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA8366133 rs141229863 |
813 | K>R | No |
ClinGen ESP ExAC gnomAD |
|
rs139046650 CA8366135 |
817 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA397953475 rs1329541544 |
818 | D>E | No |
ClinGen gnomAD |
|
rs777766926 RCV001092405 CA8366136 |
819 | S>L | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs398123233 CA8366139 |
822 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8366138 rs771406749 |
822 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1264291406 CA397953500 |
823 | M>L | No |
ClinGen gnomAD |
|
rs1030011302 CA287532951 |
825 | E>Q | No |
ClinGen TOPMed |
|
CA397953520 rs1338490917 |
826 | Q>E | No |
ClinGen gnomAD |
|
rs999347402 CA287532971 |
832 | E>G | No |
ClinGen gnomAD |
|
CA239996 rs794727085 RCV000174451 |
835 | I>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA8366143 rs760126408 |
836 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA287532988 rs377594823 |
837 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8366144 rs377594823 |
837 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA397953631 rs61750174 |
839 | T>K | Cone-rod dystrophy 6 (cord6) [Ensembl] | No |
ClinGen ESP ExAC gnomAD |
rs776073853 CA8366145 |
839 | T>S | No |
ClinGen ExAC |
|
CA397953650 rs1259276311 |
840 | E>G | No |
ClinGen Ensembl |
|
rs1297163796 CA397953666 |
841 | E>V | No |
ClinGen TOPMed |
|
rs767799735 CA8366149 |
843 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 848 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA397953762 rs1298746417 |
849 | T>I | No |
ClinGen gnomAD |
|
CA397953766 rs1176107854 |
850 | D>N | No |
ClinGen TOPMed |
|
RCV000174450 CA239994 rs531982313 |
851 | R>P | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
rs531982313 CA8366154 |
851 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8366153 rs571236000 |
851 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs757724509 CA8366155 |
854 | T>A | No |
ClinGen ExAC gnomAD |
|
CA397953833 rs1478009358 |
856 | M>T | No |
ClinGen TOPMed |
|
rs61750175 CA226089 RCV000084865 |
856 | M>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1397949475 CA397953838 |
857 | L>M | No |
ClinGen gnomAD |
|
rs374515716 CA8366157 |
859 | P>Q | Cone-rod dystrophy 6 (cord6) [Ensembl] | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
rs1214999566 CA397953863 |
860 | S>P | No |
ClinGen gnomAD |
|
TCGA novel | 860 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA397953884 rs1598150673 |
863 | E>G | No |
ClinGen Ensembl |
|
CA8366172 rs750904732 |
864 | A>T | No |
ClinGen ExAC gnomAD |
|
CA397953896 rs1555635796 RCV000658766 |
865 | L>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA8366174 rs780386793 |
866 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs375727197 CA8366176 |
867 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA8366178 rs747646491 |
868 | G>E | No |
ClinGen ExAC gnomAD |
|
rs1009898777 CA287533269 |
870 | P>T | No |
ClinGen TOPMed |
|
rs1300820031 CA397953957 |
875 | Y>C | No |
ClinGen gnomAD |
|
CA397953970 rs1296443886 |
877 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA397954020 rs1238684150 |
884 | S>N | No |
ClinGen gnomAD |
|
CA397954024 rs1312068096 |
884 | S>R | No |
ClinGen gnomAD |
|
rs753445019 CA287533276 |
885 | D>N | No |
ClinGen Ensembl |
|
rs1365519533 CA397954041 |
887 | V>L | No |
ClinGen TOPMed gnomAD |
|
CA397954071 rs1165720101 |
892 | I>V | No |
ClinGen TOPMed |
|
CA397954082 rs1237712090 |
893 | S>F | No |
ClinGen gnomAD |
|
rs750566089 CA8366190 CA8366189 |
895 | M>I | No |
ClinGen ExAC gnomAD |
|
CA397954090 rs1180472258 |
895 | M>V | No |
ClinGen gnomAD |
|
CA397954113 rs1432474619 |
898 | P>A | No |
ClinGen gnomAD |
|
CA397954121 rs780546534 |
899 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs780546534 CA8366191 |
899 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397954131 rs1379084211 |
900 | E>D | No |
ClinGen gnomAD |
|
CA397954166 rs1386640675 |
906 | N>T | No |
ClinGen gnomAD |
|
CA397954178 rs747728750 |
907 | D>E | No |
ClinGen ExAC gnomAD |
|
CA397954179 rs1257632848 |
908 | L>I | No |
ClinGen gnomAD |
|
TCGA novel | 909 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1189392055 CA397954228 |
915 | I>V | Cone-rod dystrophy 6 (cord6) [Ensembl] | No |
ClinGen TOPMed gnomAD |
CA8366200 rs61750178 |
917 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs61750178 RCV000084869 CA226095 |
917 | G>R | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs61750178 CA397954241 |
917 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA287533353 rs955166567 |
919 | H>Y | No |
ClinGen Ensembl |
|
rs918045455 CA287533362 CA397954264 |
920 | D>E | No |
ClinGen TOPMed |
|
CA8366202 rs745627220 |
923 | K>E | No |
ClinGen ExAC gnomAD |
|
CA287533596 rs963735402 COSM221829 |
925 | E>K | skin [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA397954320 rs1567961883 |
927 | I>T | No |
ClinGen Ensembl |
|
CA8366230 rs769964799 |
930 | A>D | No |
ClinGen ExAC gnomAD |
|
CA397954336 rs1370972064 |
930 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA8366229 rs769964799 |
930 | A>V | No |
ClinGen ExAC gnomAD |
|
CA8366232 rs766418901 |
932 | M>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA8366231 rs763214846 |
932 | M>V | No |
ClinGen ExAC gnomAD |
|
rs61750179 CA397954361 |
934 | A>T | Leber congenital amaurosis 1 (lca1) [Ensembl] | No |
ClinGen gnomAD |
CA397954365 rs1423857529 |
934 | A>V | No |
ClinGen TOPMed |
|
CA397954374 rs1236572248 |
935 | S>L | Variant assessed as Somatic; 0.0 impact. Leber congenital amaurosis 1 (lca1) [NCI-TCGA, Ensembl] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1458985581 CA397954384 |
936 | G>E | No |
ClinGen TOPMed |
|
rs1158556726 CA397954429 |
939 | Q>H | No |
ClinGen gnomAD |
|
CA397954438 rs1421873156 |
940 | R>Q | No |
ClinGen gnomAD |
|
rs768080447 CA8366235 |
940 | R>W | No |
ClinGen ExAC gnomAD |
|
rs369527655 CA8366239 |
944 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
COSM1290779 RCV000084871 rs61750180 CA226099 |
946 | A>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
rs1337284752 CA397954551 |
947 | A>S | No |
ClinGen TOPMed |
|
CA397954557 rs1268610857 |
947 | A>V | No |
ClinGen TOPMed |
|
rs1224156529 CA397954619 |
951 | N>S | No |
ClinGen gnomAD |
|
CA8366244 rs746733885 |
955 | D>N | No |
ClinGen ExAC gnomAD |
|
rs1211791165 CA397954672 |
956 | I>F | No |
ClinGen gnomAD |
|
CA397954702 rs1243279091 |
958 | S>I | No |
ClinGen gnomAD |
|
CA397954706 rs1243279091 |
958 | S>N | No |
ClinGen gnomAD |
|
rs1567961983 CA397954718 |
959 | A>D | No |
ClinGen Ensembl |
|
rs781010216 CA397954729 |
960 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM985813 rs781010216 CA8366246 |
960 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA397954744 rs1442036010 |
961 | G>D | No |
ClinGen gnomAD |
|
CA397954779 rs1413040642 |
963 | F>L | No |
ClinGen gnomAD |
|
CA287533750 rs371367958 |
963 | F>S | No |
ClinGen gnomAD |
|
CA287533751 rs765051553 COSM1209210 |
964 | R>C | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
CA397954790 rs1178480902 |
964 | R>H | No |
ClinGen gnomAD |
|
CA397954807 rs1329345247 |
965 | M>I | No |
ClinGen gnomAD |
|
CA8366249 rs774240595 |
965 | M>L | No |
ClinGen ExAC gnomAD |
|
rs933256547 CA287533776 |
966 | R>G | No |
ClinGen TOPMed gnomAD |
|
rs1417190573 CA8366251 |
966 | R>H | No |
ClinGen TOPMed gnomAD |
|
CA397954822 rs1417190573 |
966 | R>L | No |
ClinGen TOPMed gnomAD |
|
rs1417190573 CA8366250 |
966 | R>P | No |
ClinGen TOPMed gnomAD |
|
CA397954813 rs933256547 |
966 | R>S | No |
ClinGen TOPMed gnomAD |
|
rs1274096103 CA397954837 |
967 | H>R | No |
ClinGen gnomAD |
|
CA397954877 rs1342592717 |
969 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA397954908 rs1220643568 |
972 | P>S | No |
ClinGen gnomAD |
|
CA8366253 rs181567056 |
973 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
rs776083430 CA287533778 |
974 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs776083430 CA397954932 |
974 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397954954 rs61750184 |
976 | R>H | Leber congenital amaurosis 1 (lca1) [Ensembl] | No |
ClinGen gnomAD |
rs764522054 CA8366255 |
977 | I>T | No |
ClinGen ExAC gnomAD |
|
rs754320374 CA8366256 |
978 | G>V | No |
ClinGen ExAC gnomAD |
|
rs1555635874 RCV000658767 CA397954991 |
979 | L>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1181152535 CA397955020 |
981 | S>W | No |
ClinGen TOPMed |
|
rs1417664618 CA397955068 |
982 | G>D | No |
ClinGen gnomAD |
|
rs1385233975 CA397955077 |
983 | P>S | No |
ClinGen gnomAD |
|
rs1395017892 CA397955095 |
984 | C>* | No |
ClinGen gnomAD |
|
CA226110 rs61750186 RCV000084878 |
984 | C>Y | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1323485313 CA397955135 |
988 | V>M | No |
ClinGen TOPMed |
|
rs1316312106 CA397955154 |
989 | V>G | No |
ClinGen gnomAD |
|
CA397955144 rs1248867031 |
989 | V>M | No |
ClinGen gnomAD |
|
rs1353569467 CA397955156 |
990 | G>S | No |
ClinGen gnomAD |
|
CA287534071 rs367767119 |
992 | T>I | No |
ClinGen ESP TOPMed |
|
rs1238460262 CA397955209 |
994 | P>S | No |
ClinGen gnomAD |
|
CA287534095 rs777075412 |
995 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8366275 rs777075412 |
995 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs777075412 CA397955222 |
995 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA287534097 rs559102087 |
997 | C>F | No |
ClinGen 1000Genomes |
|
rs547885527 CA8366276 |
999 | F>Y | No |
ClinGen 1000Genomes ExAC TOPMed |
|
rs1351677808 CA397955287 |
1000 | G>R | No |
ClinGen gnomAD |
|
rs1254226185 CA397955294 |
1001 | D>N | No |
ClinGen gnomAD |
|
rs1462685344 CA397955318 |
1002 | T>M | No |
ClinGen gnomAD |
|
CA397955326 rs1237514826 |
1003 | V>F | No |
ClinGen gnomAD |
|
CA397955344 rs563005151 |
1004 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8366280 rs765914203 |
1008 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs765914203 CA397955390 |
1008 | R>L | No |
ClinGen ExAC gnomAD |
|
CA397955404 rs1330033723 |
1009 | M>I | No |
ClinGen gnomAD |
|
rs1452774826 CA397955400 |
1009 | M>T | No |
ClinGen gnomAD |
|
CA287534202 rs199912675 |
1011 | S>Y | No |
ClinGen 1000Genomes gnomAD |
|
rs1232859879 CA397955475 |
1015 | P>S | No |
ClinGen gnomAD |
|
rs1029468978 CA397955544 |
1017 | R>C | No |
ClinGen TOPMed |
|
rs1029468978 CA287534387 |
1017 | R>S | No |
ClinGen TOPMed |
|
RCV000084883 rs61750190 CA226119 |
1019 | H>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA397955586 rs1355636249 |
1022 | L>M | No |
ClinGen gnomAD |
|
COSM1253915 CA397955592 rs866511152 |
1022 | L>W | oesophagus [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA397955628 rs1405830184 |
1025 | V>E | No |
ClinGen gnomAD |
|
rs1367830280 CA397955622 |
1025 | V>M | No |
ClinGen gnomAD |
|
rs1360089242 CA397955665 |
1028 | L>F | No |
ClinGen gnomAD |
|
rs535800696 CA8366311 |
1029 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1296317691 CA397955678 |
1029 | R>H | No |
ClinGen TOPMed gnomAD |
|
CA8366310 rs535800696 |
1029 | R>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1321055356 CA397955687 |
1030 | A>D | No |
ClinGen gnomAD |
|
CA287534462 rs1020193279 |
1031 | L>P | No |
ClinGen TOPMed |
|
CA8366312 rs770266116 |
1032 | D>E | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1035 | Y>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA226124 rs61750192 RCV000084886 |
1036 | Q>* | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs61750193 CA226126 RCV000084887 |
1036 | Q>H | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA397955772 rs1186594594 |
1037 | V>M | No |
ClinGen gnomAD |
|
CA226128 RCV000084888 rs61750194 |
1040 | R>G | Leber congenital amaurosis 1 (lca1) [Ensembl] | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA397955809 rs1162194690 |
1040 | R>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA397955807 rs1162194690 |
1040 | R>Q | No |
ClinGen gnomAD |
|
rs569363032 CA8366316 |
1042 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs775044013 CA287534544 |
1042 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs775044013 CA8366317 |
1042 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397955834 rs1433077309 |
1043 | T>A | No |
ClinGen TOPMed gnomAD |
|
rs1289590584 CA397955838 |
1043 | T>K | No |
ClinGen gnomAD |
|
rs753600757 CA8366320 |
1044 | E>A | No |
ClinGen ExAC gnomAD |
|
rs199611541 CA8366319 |
1044 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1212209285 CA397955930 |
1047 | G>D | No |
ClinGen TOPMed |
|
rs1178756761 CA397955928 |
1047 | G>S | No |
ClinGen gnomAD |
|
rs1598151819 CA397955943 |
1048 | K>T | No |
ClinGen Ensembl |
|
rs1465082500 CA397955954 |
1049 | G>S | No |
ClinGen gnomAD |
|
CA397955960 rs1221467842 |
1050 | A>S | No |
ClinGen TOPMed |
|
CA397955963 rs1356162505 |
1050 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs1273973537 CA397955964 |
1051 | E>K | No |
ClinGen gnomAD |
|
rs1343263078 CA397955972 |
1052 | D>N | No |
ClinGen gnomAD |
|
rs1283435621 CA397955981 |
1053 | T>A | No |
ClinGen gnomAD |
|
CA397955999 rs1316723509 |
1055 | W>* | No |
ClinGen gnomAD |
|
TCGA novel | 1055 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1271532171 CA397956008 |
1057 | V>M | No |
ClinGen gnomAD |
|
CA287534835 rs912238350 |
1059 | R>K | No |
ClinGen Ensembl |
|
CA8366337 rs563091520 |
1060 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA397956024 rs1479610648 |
1060 | R>S | No |
ClinGen gnomAD |
|
CA397956031 rs1475142231 |
1061 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA397956075 rs1322730499 |
1065 | P>L | No |
ClinGen gnomAD |
|
CA397956071 rs1410401604 |
1065 | P>S | No |
ClinGen gnomAD |
|
CA8366339 rs750301530 |
1067 | P>L | No |
ClinGen ExAC gnomAD |
|
rs1303350691 CA397956086 |
1067 | P>T | No |
ClinGen gnomAD |
|
rs759778209 CA8366340 |
1068 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV000084892 rs61750196 |
1069 | P>missing | No |
ClinVar dbSNP |
|
rs1187326101 CA397956110 |
1069 | P>S | No |
ClinGen gnomAD |
|
CA397956130 rs1421988784 |
1071 | D>N | No |
ClinGen gnomAD |
|
rs752784361 CA8366343 |
1074 | P>L | No |
ClinGen ExAC gnomAD |
|
rs752784361 CA8366342 |
1074 | P>R | No |
ClinGen ExAC gnomAD |
|
CA8366345 rs754266653 |
1075 | G>R | No |
ClinGen ExAC gnomAD |
|
CA397956247 rs1249600456 |
1077 | S>G | No |
ClinGen TOPMed gnomAD |
|
CA287535194 rs868071106 |
1077 | S>I | No |
ClinGen Ensembl |
|
RCV000084893 rs281865412 |
1080 | G>missing | No |
ClinVar dbSNP |
|
rs865916918 CA287535253 |
1080 | G>D | No |
ClinGen Ensembl |
|
rs371919912 CA8366365 |
1080 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA397956324 rs750743574 |
1082 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750743574 CA8366367 |
1082 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA287535288 rs867857411 |
1084 | Q>K | No |
ClinGen Ensembl |
|
rs550992644 CA8366369 |
1084 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
TCGA novel | 1085 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs975471065 CA287535289 |
1086 | I>F | No |
ClinGen Ensembl |
|
rs368916122 CA8366370 |
1086 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1471272902 CA397956379 |
1087 | P>S | No |
ClinGen gnomAD |
|
CA397956401 rs779735498 |
1089 | E>Q | No |
ClinGen TOPMed gnomAD |
|
rs371952237 CA287535356 |
1090 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs371952237 CA8366373 |
1090 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8366372 rs780510809 |
1090 | R>W | No |
ClinGen ExAC gnomAD |
|
rs773307918 CA287535363 |
1091 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773307918 CA8366375 |
1091 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA397956433 rs1325717461 |
1092 | R>L | No |
ClinGen TOPMed gnomAD |
|
CA397956431 rs1325717461 |
1092 | R>P | No |
ClinGen TOPMed gnomAD |
|
rs1325717461 CA397956430 |
1092 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA287535392 rs868166805 |
1093 | K>N | No |
ClinGen gnomAD |
|
rs1349072188 CA397956449 |
1094 | L>M | No |
ClinGen TOPMed |
|
rs1024155105 CA287535412 |
1095 | E>K | No |
ClinGen TOPMed gnomAD |
|
CA397956475 rs1598152119 |
1096 | K>* | No |
ClinGen Ensembl |
|
rs1250969896 CA397956495 |
1097 | A>G | No |
ClinGen gnomAD |
|
rs569402782 CA8366381 |
1097 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs569402782 CA8366380 |
1097 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA397956503 rs1430847788 |
1098 | R>L | No |
ClinGen TOPMed gnomAD |
|
CA397956501 rs1430847788 |
1098 | R>Q | No |
ClinGen TOPMed gnomAD |
|
rs915977682 CA287535445 |
1099 | P>A | No |
ClinGen Ensembl |
|
rs948784762 CA287535452 |
1099 | P>L | No |
ClinGen gnomAD |
|
CA397956522 rs1460913139 |
1100 | G>D | No |
ClinGen gnomAD |
|
CA397956516 rs1373025301 |
1100 | G>S | No |
ClinGen gnomAD |
|
CA397956530 rs1300326673 |
1101 | Q>* | No |
ClinGen gnomAD |
|
TCGA novel | 1102 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8366383 rs765682027 |
1102 | F>Y | No |
ClinGen ExAC gnomAD |
|
rs1404609480 CA397956564 |
1103 | S>F | No |
ClinGen TOPMed gnomAD |
|
rs904486446 CA287535484 |
1104 | S>R | No |
ClinGen Ensembl |
4 associated diseases with Q02846
[MIM: 204000]: Leber congenital amaurosis 1 (LCA1)
A severe dystrophy of the retina, typically becoming evident in the first years of life. Visual function is usually poor and often accompanied by nystagmus, sluggish or near-absent pupillary responses, photophobia, high hyperopia and keratoconus. {ECO:0000269|PubMed:11035546, ECO:0000269|PubMed:12365911, ECO:0000269|PubMed:15123990, ECO:0000269|PubMed:17724218, ECO:0000269|PubMed:21602930, ECO:0000269|PubMed:27475985, ECO:0000269|PubMed:30319355, ECO:0000269|PubMed:8944027, ECO:0000269|PubMed:9888789}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 601777]: Cone-rod dystrophy 6 (CORD6)
An inherited retinal dystrophy characterized by retinal pigment deposits visible on fundus examination, predominantly in the macular region, and initial loss of cone photoreceptors followed by rod degeneration. This leads to decreased visual acuity and sensitivity in the central visual field, followed by loss of peripheral vision. Severe loss of vision occurs earlier than in retinitis pigmentosa, due to cone photoreceptors degenerating at a higher rate than rod photoreceptors. {ECO:0000269|PubMed:12552567, ECO:0000269|PubMed:15111605, ECO:0000269|PubMed:18332321, ECO:0000269|PubMed:18487367, ECO:0000269|PubMed:20517349, ECO:0000269|PubMed:21552474, ECO:0000269|PubMed:22194653, ECO:0000269|PubMed:23734073, ECO:0000269|PubMed:24480840, ECO:0000269|PubMed:25515582, ECO:0000269|PubMed:27475985, ECO:0000269|PubMed:30319355, ECO:0000269|PubMed:9618177, ECO:0000269|PubMed:9683616}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 215500]: Choroidal dystrophy, central areolar, 1 (CACD1)
A form of central areolar choroidal dystrophy, a retinal disease that affects the macula and results in a well-demarcated circumscribed area of atrophy of the pigment epithelium and choriocapillaris. CACD1 inheritance is autosomal recessive. {ECO:0000269|PubMed:22695961}. Note=The disease may be caused by variants affecting the gene represented in this entry.
[MIM: 618555]: Night blindness, congenital stationary, 1I (CSNB1I)
A form of congenital stationary night blindness, a non-progressive retinal disorder characterized by impaired night vision or in dim light, with good vision only on bright days. CSNB1I patients present with night blindness from infancy or early childhood. Visual acuity is preserved, but some patients have color vision and/or visual field defects. Progression to mild retinitis pigmentosa may occur. CSNB1I inheritance is autosomal recessive. {ECO:0000269|PubMed:29559409}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A severe dystrophy of the retina, typically becoming evident in the first years of life. Visual function is usually poor and often accompanied by nystagmus, sluggish or near-absent pupillary responses, photophobia, high hyperopia and keratoconus. {ECO:0000269|PubMed:11035546, ECO:0000269|PubMed:12365911, ECO:0000269|PubMed:15123990, ECO:0000269|PubMed:17724218, ECO:0000269|PubMed:21602930, ECO:0000269|PubMed:27475985, ECO:0000269|PubMed:30319355, ECO:0000269|PubMed:8944027, ECO:0000269|PubMed:9888789}. Note=The disease is caused by variants affecting the gene represented in this entry.
- An inherited retinal dystrophy characterized by retinal pigment deposits visible on fundus examination, predominantly in the macular region, and initial loss of cone photoreceptors followed by rod degeneration. This leads to decreased visual acuity and sensitivity in the central visual field, followed by loss of peripheral vision. Severe loss of vision occurs earlier than in retinitis pigmentosa, due to cone photoreceptors degenerating at a higher rate than rod photoreceptors. {ECO:0000269|PubMed:12552567, ECO:0000269|PubMed:15111605, ECO:0000269|PubMed:18332321, ECO:0000269|PubMed:18487367, ECO:0000269|PubMed:20517349, ECO:0000269|PubMed:21552474, ECO:0000269|PubMed:22194653, ECO:0000269|PubMed:23734073, ECO:0000269|PubMed:24480840, ECO:0000269|PubMed:25515582, ECO:0000269|PubMed:27475985, ECO:0000269|PubMed:30319355, ECO:0000269|PubMed:9618177, ECO:0000269|PubMed:9683616}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A form of central areolar choroidal dystrophy, a retinal disease that affects the macula and results in a well-demarcated circumscribed area of atrophy of the pigment epithelium and choriocapillaris. CACD1 inheritance is autosomal recessive. {ECO:0000269|PubMed:22695961}. Note=The disease may be caused by variants affecting the gene represented in this entry.
- A form of congenital stationary night blindness, a non-progressive retinal disorder characterized by impaired night vision or in dim light, with good vision only on bright days. CSNB1I patients present with night blindness from infancy or early childhood. Visual acuity is preserved, but some patients have color vision and/or visual field defects. Progression to mild retinitis pigmentosa may occur. CSNB1I inheritance is autosomal recessive. {ECO:0000269|PubMed:29559409}. Note=The disease is caused by variants affecting the gene represented in this entry.
6 regional properties for Q02846
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | Protein kinase domain | 525 - 808 | IPR000719 |
domain | Adenylyl cyclase class-3/4/guanylyl cyclase | 844 - 1057 | IPR001054 |
domain | Serine-threonine/tyrosine-protein kinase, catalytic domain | 579 - 800 | IPR001245 |
domain | Receptor, ligand binding region | 73 - 394 | IPR001828 |
domain | Haem NO binding associated | 820 - 865 | IPR011645 |
conserved_site | Adenylyl cyclase class-4/guanylyl cyclase, conserved site | 987 - 1010 | IPR018297 |
Functions
Description | ||
---|---|---|
EC Number | 4.6.1.2 | Phosphorus-oxygen lyases |
Subcellular Localization |
|
|
PANTHER Family | ||
PANTHER Subfamily | ||
PANTHER Protein Class | ||
PANTHER Pathway Category | No pathway information available |
7 GO annotations of cellular component
Name | Definition |
---|---|
endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
nuclear outer membrane | The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes. |
photoreceptor disc membrane | Stack of disc membranes located inside a photoreceptor outer segment, and containing densely packed molecules of photoreceptor proteins that traverse the lipid bilayer. Disc membranes arise as evaginations of the ciliary membrane during the development of the outer segment and may or may not remain contiguous with the ciliary membrane. |
photoreceptor outer segment | The outer segment of a vertebrate photoreceptor that contains a stack of membrane discs embedded with photoreceptor proteins. |
photoreceptor outer segment membrane | The membrane surrounding the outer segment of a vertebrate photoreceptor. |
plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
8 GO annotations of molecular function
Name | Definition |
---|---|
ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
GTP binding | Binding to GTP, guanosine triphosphate. |
guanylate cyclase activity | Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate. |
peptide receptor activity | Combining with an extracellular or intracellular peptide to initiate a change in cell activity. |
protein homodimerization activity | Binding to an identical protein to form a homodimer. |
protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. |
protein-containing complex binding | Binding to a macromolecular complex. |
signaling receptor activity | Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response. |
7 GO annotations of biological process
Name | Definition |
---|---|
cGMP biosynthetic process | The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate. |
cGMP-mediated signaling | Any intracellular signal transduction in which the signal is passed on within the cell via cyclic GMP (cGMP). Includes production of cGMP, and downstream effectors that further transmit the signal within the cell. |
protein phosphorylation | The process of introducing a phosphate group on to a protein. |
receptor guanylyl cyclase signaling pathway | The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses guanylyl cyclase activity, and ending with the regulation of a downstream cellular process, e.g. transcription. |
regulation of rhodopsin mediated signaling pathway | Any process that modulates the frequency, rate or extent of rhodopsin-mediated signaling. |
signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
visual perception | The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image. |
17 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
P46197 | NPR2 | Atrial natriuretic peptide receptor 2 | Bos taurus (Bovine) | PR |
O02740 | GUCY2F | Retinal guanylyl cyclase 2 | Bos taurus (Bovine) | PR |
P51841 | GUCY2F | Retinal guanylyl cyclase 2 | Homo sapiens (Human) | PR |
P20594 | NPR2 | Atrial natriuretic peptide receptor 2 | Homo sapiens (Human) | PR |
Q6VVW5 | Npr2 | Atrial natriuretic peptide receptor 2 | Mus musculus (Mouse) | PR |
Q5SDA5 | Gucy2f | Retinal guanylyl cyclase 2 | Mus musculus (Mouse) | PR |
P52785 | Gucy2e | Retinal guanylyl cyclase 1 | Mus musculus (Mouse) | PR |
P18910 | Npr1 | Atrial natriuretic peptide receptor 1 | Rattus norvegicus (Rat) | PR |
P16067 | Npr2 | Atrial natriuretic peptide receptor 2 | Rattus norvegicus (Rat) | PR |
P51842 | Gucy2f | Retinal guanylyl cyclase 2 | Rattus norvegicus (Rat) | PR |
P51840 | Gucy2e | Retinal guanylyl cyclase 1 | Rattus norvegicus (Rat) | PR |
Q09435 | gcy-1 | Receptor-type guanylate cyclase gcy-1 | Caenorhabditis elegans | PR |
O16544 | gcy-19 | Receptor-type guanylate cyclase gcy-19 | Caenorhabditis elegans | PR |
Q18331 | gcy-11 | Receptor-type guanylate cyclase gcy-11 | Caenorhabditis elegans | PR |
Q10029 | gcy-2 | Receptor-type guanylate cyclase gcy-2 | Caenorhabditis elegans | PR |
X5M8U1 | gcy-17 | Receptor-type guanylate cyclase gcy-17 | Caenorhabditis elegans | PR |
Q23682 | gcy-5 | Receptor-type guanylate cyclase gcy-5 | Caenorhabditis elegans | PR |
10 | 20 | 30 | 40 | 50 | 60 |
MTACARRAGG | LPDPGLCGPA | WWAPSLPRLP | RALPRLPLLL | LLLLLQPPAL | SAVFTVGVLG |
70 | 80 | 90 | 100 | 110 | 120 |
PWACDPIFSR | ARPDLAARLA | AARLNRDPGL | AGGPRFEVAL | LPEPCRTPGS | LGAVSSALAR |
130 | 140 | 150 | 160 | 170 | 180 |
VSGLVGPVNP | AACRPAELLA | EEAGIALVPW | GCPWTQAEGT | TAPAVTPAAD | ALYALLRAFG |
190 | 200 | 210 | 220 | 230 | 240 |
WARVALVTAP | QDLWVEAGRS | LSTALRARGL | PVASVTSMEP | LDLSGAREAL | RKVRDGPRVT |
250 | 260 | 270 | 280 | 290 | 300 |
AVIMVMHSVL | LGGEEQRYLL | EAAEELGLTD | GSLVFLPFDT | IHYALSPGPE | ALAALANSSQ |
310 | 320 | 330 | 340 | 350 | 360 |
LRRAHDAVLT | LTRHCPSEGS | VLDSLRRAQE | RRELPSDLNL | QQVSPLFGTI | YDAVFLLARG |
370 | 380 | 390 | 400 | 410 | 420 |
VAEARAAAGG | RWVSGAAVAR | HIRDAQVPGF | CGDLGGDEEP | PFVLLDTDAA | GDRLFATYML |
430 | 440 | 450 | 460 | 470 | 480 |
DPARGSFLSA | GTRMHFPRGG | SAPGPDPSCW | FDPNNICGGG | LEPGLVFLGF | LLVVGMGLAG |
490 | 500 | 510 | 520 | 530 | 540 |
AFLAHYVRHR | LLHMQMVSGP | NKIILTVDDI | TFLHPHGGTS | RKVAQGSRSS | LGARSMSDIR |
550 | 560 | 570 | 580 | 590 | 600 |
SGPSQHLDSP | NIGVYEGDRV | WLKKFPGDQH | IAIRPATKTA | FSKLQELRHE | NVALYLGLFL |
610 | 620 | 630 | 640 | 650 | 660 |
ARGAEGPAAL | WEGNLAVVSE | HCTRGSLQDL | LAQREIKLDW | MFKSSLLLDL | IKGIRYLHHR |
670 | 680 | 690 | 700 | 710 | 720 |
GVAHGRLKSR | NCIVDGRFVL | KITDHGHGRL | LEAQKVLPEP | PRAEDQLWTA | PELLRDPALE |
730 | 740 | 750 | 760 | 770 | 780 |
RRGTLAGDVF | SLAIIMQEVV | CRSAPYAMLE | LTPEEVVQRV | RSPPPLCRPL | VSMDQAPVEC |
790 | 800 | 810 | 820 | 830 | 840 |
ILLMKQCWAE | QPELRPSMDH | TFDLFKNINK | GRKTNIIDSM | LRMLEQYSSN | LEDLIRERTE |
850 | 860 | 870 | 880 | 890 | 900 |
ELELEKQKTD | RLLTQMLPPS | VAEALKTGTP | VEPEYFEQVT | LYFSDIVGFT | TISAMSEPIE |
910 | 920 | 930 | 940 | 950 | 960 |
VVDLLNDLYT | LFDAIIGSHD | VYKVETIGDA | YMVASGLPQR | NGQRHAAEIA | NMSLDILSAV |
970 | 980 | 990 | 1000 | 1010 | 1020 |
GTFRMRHMPE | VPVRIRIGLH | SGPCVAGVVG | LTMPRYCLFG | DTVNTASRME | STGLPYRIHV |
1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
NLSTVGILRA | LDSGYQVELR | GRTELKGKGA | EDTFWLVGRR | GFNKPIPKPP | DLQPGSSNHG |
1090 | 1100 | ||||
ISLQEIPPER | RRKLEKARPG | QFS |