Descriptions

Myosin Va (MyoVa) is a protein that functions as a dimer for processive walking on actin filaments. Autoinhibition of MyoVa involves the motor domain (MD) and the globular tail domain (GTD), with the motor adopting a closed, autoinhibited state that is inactive for ATPase activity. This state prevents the unnecessary consumption of ATP and uncontrolled movement when not transporting cargo. MyoVa exists in several states, including closed, half-closed, transition, and open states. The closed state of MyoVa can be changed to a half-closed state when the d-strand temporarily dissociates from the GTD, resulting in the dynamic confirmation of the short side in the triangular-shaped structure, which is called the closed state. In the presence of both a GTBM-containing protein and Rab11a, the half-closed conformation undergoes a significant motion of both the MD and the lever arm (LA), resulting in the disassembly of the hinge structure, which is referred to as a transition state. Finally, the unstable transition conformation quickly shifts to the open conformation, allowing the GTPs to tightly associate with cargo and the MDs to hydrolyze ATP for the walking process. Notably, a single cargo binding of either a GTBM-binding protein or Rab11a is insufficient to effectively activate MyoVa.

Autoinhibitory domains (AIDs)

Target domain

1420-1804 (Globular tail domain, GTD)

Relief mechanism

Ligand binding, Partner binding

Assay

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

32 structures for Q02440

Entry ID Method Resolution Chain Position Source
1OE9 X-ray 205 A A 1-792 PDB
1W7I X-ray 300 A A 1-792 PDB
1W7J X-ray 200 A A 1-792 PDB
1W8J X-ray 270 A A/B/C/D 1-766 PDB
2DFS EM 2400 A A/M 1-1080 PDB
7PLT EM 330 A A 1-792 PDB
7PLU EM 320 A A/D 1-792 PDB
7PLV EM 350 A A 1-792 PDB
7PLW EM 350 A A 1-792 PDB
7PLX EM 360 A A 1-792 PDB
7PLY EM 320 A A 1-792 PDB
7PLZ EM 320 A A/D 1-792 PDB
7PM0 EM 360 A A 1-792 PDB
7PM1 EM 350 A A 1-792 PDB
7PM2 EM 360 A A 1-792 PDB
7PM5 EM 310 A A 1-792 PDB
7PM6 EM 300 A A/D 1-792 PDB
7PM7 EM 350 A A 1-792 PDB
7PM8 EM 350 A A 1-792 PDB
7PM9 EM 370 A A 1-792 PDB
7PMA EM 360 A A 1-792 PDB
7PMB EM 360 A A 1-792 PDB
7PMC EM 370 A A 1-792 PDB
7PMD EM 290 A A 1-792 PDB
7PME EM 290 A A/D 1-792 PDB
7PMF EM 340 A A 1-792 PDB
7PMG EM 330 A A 1-792 PDB
7PMH EM 340 A A 1-792 PDB
7PMI EM 330 A A 1-792 PDB
7PMJ EM 340 A A 1-792 PDB
7PML EM 330 A A 1-792 PDB
AF-Q02440-F1 Predicted AlphaFoldDB

22 variants for Q02440

Variant ID(s) Position Change Description Diseaes Association Provenance
rs736055680 382 T>P No EVA
rs736745830 384 T>P No EVA
rs1058368006 609 G>S No EVA
rs80679970 757 A>P No EVA
rs732934975 762 I>K No EVA
rs80662552 765 D>N No EVA
rs3387937535 768 R>K No EVA
rs80711306 784 R>K No EVA
rs80749623 802 R>K No EVA
rs10731185 815 R>I No EVA
rs737702955 881 V>G No EVA
rs735723497 915 S>A No EVA
rs732058469 975 S>R No EVA
rs738243993 976 E>G No EVA
rs314896935 1004 Q>K No EVA
rs734049589 1043 N>T No EVA
rs733720368 1371 I>S No EVA
rs14946358 1565 T>A No EVA
rs3388085152 1661 Q>R No EVA
rs736795043 1718 L>R No EVA
rs741436294 1809 S>P No EVA
rs731943437 1810 L>P No EVA

No associated diseases with Q02440

2 regional properties for Q02440

Type Name Position InterPro Accession
domain MerR-type HTH domain 2 - 72 IPR000551
domain TipAS antibiotic-recognition domain 135 - 248 IPR012925

Functions

Description
EC Number
Subcellular Localization
  • Golgi apparatus membrane
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

8 GO annotations of cellular component

Name Definition
actin cytoskeleton The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
filamentous actin A two-stranded helical polymer of the protein actin.
Golgi membrane The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
insulin-responsive compartment A small membrane-bounded vesicle that releases its contents by exocytosis in response to insulin stimulation; the contents are enriched in GLUT4, IRAP and VAMP2.
membrane A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
myosin complex A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes.
vesicle Any small, fluid-filled, spherical organelle enclosed by membrane.

5 GO annotations of molecular function

Name Definition
actin filament binding Binding to an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
calmodulin binding Binding to calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
microfilament motor activity A motor activity that generates movement along a microfilament, driven by ATP hydrolysis.
minus-end directed microfilament motor activity A motor activity that generates movement along a microfilament towards the minus end, driven by ATP hydrolysis. The minus end of an actin filament is the end that does not preferentially add actin monomers.

5 GO annotations of biological process

Name Definition
actin filament organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
cellular response to insulin stimulus Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.
protein localization to plasma membrane A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane.
vesicle transport along actin filament Movement of a vesicle along an actin filament, mediated by motor proteins.
vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.

16 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q27991 MYH10 Myosin-10 Bos taurus (Bovine) SS
Q9I8D1 MYO6 Unconventional myosin-VI Gallus gallus (Chicken) SS
Q5U651 RASIP1 Ras-interacting protein 1 Homo sapiens (Human) PR
B0I1T2 MYO1G Unconventional myosin-Ig Homo sapiens (Human) PR
Q9NQX4 MYO5C Unconventional myosin-Vc Homo sapiens (Human) SS
Q9ULV0 MYO5B Unconventional myosin-Vb Homo sapiens (Human) SS
P35580 MYH10 Myosin-10 Homo sapiens (Human) SS
Q9Y4I1 MYO5A Unconventional myosin-Va Homo sapiens (Human) SS
Q3U0S6 Rasip1 Ras-interacting protein 1 Mus musculus (Mouse) PR
P21271 Myo5b Unconventional myosin-Vb Mus musculus (Mouse) SS
Q61879 Myh10 Myosin-10 Mus musculus (Mouse) SS
Q99104 Myo5a Unconventional myosin-Va Mus musculus (Mouse) EV
P70569 Myo5b Unconventional myosin-Vb Rattus norvegicus (Rat) SS
Q9JLT0 Myh10 Myosin-10 Rattus norvegicus (Rat) SS
Q9QYF3 Myo5a Unconventional myosin-Va Rattus norvegicus (Rat) SS
Q9M2K0 XI-J Myosin-16 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MAASELYTKY ARVWIPDPEE VWKSAELLKD YKPGDKVLQL RLEEGKDLEY CLDPKTKELP
70 80 90 100 110 120
PLRNPDILVG ENDLTALSYL HEPAVLHNLK VRFIDSKLIY TYCGIVLVAI NPYEQLPIYG
130 140 150 160 170 180
EDIINAYSGQ NMGDMDPHIF AVAEEAYKQM ARDERNQSII VSGESGAGKT VSAKYAMRYF
190 200 210 220 230 240
ATVSGSASEA NVEEKVLASN PIMESIGNAK TTRNDNSSRF GKYIEIGFDK RYRIIGANMR
250 260 270 280 290 300
TYLLEKSRVV FQAEEERNYH IFYQLCASAA LPEFKTLRLG NANYFHYTKQ GGSPVIDGID
310 320 330 340 350 360
DAKEMVNTRQ ACTLLGISDS YQMGIFRILA GILHLGNVEF ASRDSDSCAI PPKHDPLTIF
370 380 390 400 410 420
CDLMGVDYEE MAHWLCHRKL ATATETYIKP ISKLHAINAR DALAKHIYAN LFNWIVDHVN
430 440 450 460 470 480
KALHSTVKQH SFIGVLDIYG FETFEINSFE QFCINYANEK LQQQFNMHVF KLEQEEYMKE
490 500 510 520 530 540
QIPWTLIDFY DNQPCINLIE AKMGVLDLLD EECKMPKGSD DTWAQKLYNT HLNKCALFEK
550 560 570 580 590 600
PRLSNKAFII KHFADKVEYQ CEGFLEKNKD TVYEEQIKVL KSSKKFKLLP ELFQDEEKAI
610 620 630 640 650 660
SPTSATPSGR VPLSRTPVKP AKARPGQTSK EHKKTVGHQF RNSLHLLMET LNATTPHYVR
670 680 690 700 710 720
CIKPNDFKFP FTFDEKRAVQ QLRACGVLET IRISAAGFPS RWTYQEFFSR YRVLMKQKDV
730 740 750 760 770 780
LSDRKQTCKN VLEKLILDKD KYQFGKTKIF FRAGQVAYLE KIRADKLRAA CIRIQKTIRG
790 800 810 820 830 840
WLMRKKYMRM RRAAITIQRY VRGHQARCYA TFLRRTRAAI IIQKFQRMYV VRKRYQCMRD
850 860 870 880 890 900
ATIALQALLR GYLVRNKYQM MLREHKSIII QKHVRGWLAR VHYHRTLKAI VYLQCCYRRM
910 920 930 940 950 960
MAKRELKKLK IEARSVERYK KLHIGLENKI MQLQRKIDEQ NKEYKSLLEK MNNLEITYST
970 980 990 1000 1010 1020
ETEKLRSDVE RLRMSEEEAK NATNRVLSLQ EEIAKLRKEL HQTQTEKKTI EEWADKYKHE
1030 1040 1050 1060 1070 1080
TEQLVSELKE QNTLLKTEKE ELNRRIHDQA KEITETMEKK LVEETKQLEL DLNDERLRYQ
1090 1100 1110 1120 1130 1140
NLLNEFSRLE ERYDDLKDEM NLMVSIPKPG HKRTDSTHSS NESEYTFSSE ITEAEDLPLR
1150 1160 1170 1180 1190 1200
MEEPSEKKAP LDMSLFLKLQ KRVTELEQEK QSLQDELDRK EEQALRAKAK EEERPPIRGA
1210 1220 1230 1240 1250 1260
ELEYESLKRQ ELESENKKLK NELNELQKAL TETRAPEVTA PGAPAYRVLL DQLTSVSEEL
1270 1280 1290 1300 1310 1320
EVRKEEVLIL RSQLVSQKEA IQPKEDKNTM TDSTILLEDV QKMKDKGEIA QAYIGLKETN
1330 1340 1350 1360 1370 1380
RLLESQLQSQ KKSHENELES LRGEIQSLKE ENNRQQQLLA QNLQLPPEAR IEASLQHEIT
1390 1400 1410 1420 1430 1440
RLTNENLDLM EQLEKQDKTV RKLKKQLKVF AKKIGELEVG QMENISPGQI IDEPIRPVNI
1450 1460 1470 1480 1490 1500
PRKEKDFQGM LEYKKEDEQK LVKNLILELK PRGVAVNLIP GLPAYILFMC VRHADYLNDD
1510 1520 1530 1540 1550 1560
QKVRSLLTST INGIKKVLKK RGDDFETVSF WLSNTCRFLH CLKQYSGEEG FMKHNTPRQN
1570 1580 1590 1600 1610 1620
EHCLTNFDLA EYRQVLSDLA IQIYQQLVRV LENILQPMIV SGMLEHETIQ GVSGVKPTGL
1630 1640 1650 1660 1670 1680
RKRTSSIADE GTYTLDSIIR QLNSFHSVMC QHGMDPELIK QVVKQMFYII GAVTLNNLLL
1690 1700 1710 1720 1730 1740
RKDMCSWSKG MQIRYNVSQL EEWLRDKNLM NSGAKETLEP LIQAAQLLQV KKKTDEDAEA
1750 1760 1770 1780 1790 1800
ICSMCNALTT AQIVKVLNLY TPVNEFEERV LVSFIRTIQL RLRDRKDSPQ LLMDAKHIFP
1810 1820
VTFPFNPSSL ALETIQIPAS LGLGFISRV