Q01973
Gene name |
ROR1 (NTRKR1) |
Protein name |
Inactive tyrosine-protein kinase transmembrane receptor ROR1 |
Names |
Neurotrophic tyrosine kinase, receptor-related 1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:4919 |
EC number |
|
Protein Class |
|

Descriptions
(Annotation based on sequence homology with P06213)
Insulin signaling controls metabolic homeostasis. Insulin receptor (IR) is a receptor tyrosine kinase (RTK) that plays essential roles in glucose metabolism and cell growth and comprises two copies of extracellular α- and β-subunits. The α-subunit and the N-terminal part of the β-subunit are on the extracellular side, and the β-subunit continues with a single transmembrane helix and C-terminal cytoplasmic domains that are targets of insulin-dependent phosphorylation in downstream signaling. The α-subunits are disulphide linked to each other and to their respective β-subunit, and they form a large ectodomain comprising several subdomains (L1, CR, L2, FnIII (1-3)). IR has two distinct insulin-binding sites with different affinities for insulin, termed sites 1 and 2. One insulin molecule binds to the primary site, which consists of the L1 domain of one IR protomer and the C-terminal helix of the α chain (α-CT) of the other, site 1. The second insulin molecule is bound to the FnIII-1 domain, site 2. The ectodomain of the active IR/IR dimer adopts asymmetric conformations under non-saturating insulin concentrations in the dynamic range of 1-3 insulins bound. In first, site 2 acts as the initial insulin recruitment site, enabling insulin binding to site 1 at lower concentrations of insulin. In the next step, occupancy of a single site 1 in the two-protomer receptor is sufficient to induce assembly of the TM domains, and ultimately the cytoplasmic kinase domains, which eventually rearrange the IR/IR dimer into an active conformation. On the other hand, the fully saturated insulin receptor adopts symmetric conformation with 4 insulins bound, showing the difference in the conformation of the semi-saturated IR.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
632-657 (Activation loop from InterPro)
Target domain |
621-882 (Protein kinase domain) |
Relief mechanism |
PTM |
Assay |
|
Autoinhibited structure

Activated structure

623 variants for Q01973
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
rs1553163562 CA340646205 RCV000504579 VAR_079530 |
736 | R>T | Hearing loss, autosomal recessive 108 DFNB108; impairs plasma membrane location; abolishes downstream NFkB activation [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
rs760355948 RCV001329353 |
910 | Y>D | Hearing loss, autosomal recessive 108 [ClinVar] | Yes |
ClinVar dbSNP |
rs1323959790 CA340711482 |
2 | H>Q | No |
ClinGen TOPMed gnomAD |
|
CA340711485 rs1489002813 |
3 | R>Q | No |
ClinGen TOPMed |
|
CA340711491 rs1344060296 |
4 | P>Q | No |
ClinGen gnomAD |
|
CA340711500 rs1205371508 |
6 | R>S | No |
ClinGen TOPMed gnomAD |
|
CA340711508 rs1259580374 |
7 | R>C | No |
ClinGen gnomAD |
|
rs1204017372 CA340711509 |
7 | R>H | No |
ClinGen TOPMed |
|
rs964935302 CA24165082 |
8 | G>E | No |
ClinGen TOPMed gnomAD |
|
CA340711512 rs1487255442 |
8 | G>W | No |
ClinGen gnomAD |
|
rs1429708765 CA340711534 |
11 | P>L | No |
ClinGen TOPMed gnomAD |
|
rs1376670876 CA340711540 |
12 | P>L | No |
ClinGen TOPMed gnomAD |
|
CA340711539 rs1376670876 |
12 | P>R | No |
ClinGen TOPMed gnomAD |
|
CA340711537 rs1173539126 |
12 | P>S | No |
ClinGen gnomAD |
|
rs1569678747 CA340711543 |
13 | L>V | No |
ClinGen Ensembl |
|
CA340711560 rs1174625161 |
16 | L>Q | No |
ClinGen gnomAD |
|
rs1234677432 CA340711575 |
19 | A>S | No |
ClinGen gnomAD |
|
CA340711576 rs1234677432 |
19 | A>T | No |
ClinGen gnomAD |
|
CA340711579 rs1569678825 |
19 | A>V | No |
ClinGen Ensembl |
|
CA340711593 rs1477158061 |
22 | L>P | No |
ClinGen TOPMed |
|
CA340711600 rs1242016930 |
23 | A>V | No |
ClinGen TOPMed |
|
rs1191938206 CA340711613 |
26 | G>R | No |
ClinGen TOPMed |
|
CA340711619 rs1398686873 |
27 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs908246474 CA24165088 |
28 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs879021889 CA24212671 |
32 | T>I | No |
ClinGen Ensembl |
|
rs1462871929 CA340711677 |
33 | E>K | No |
ClinGen gnomAD |
|
COSM125918 CA889982 rs201702143 |
35 | S>A | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
TCGA novel | 38 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 40 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 40 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 41 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs371472715 CA889984 |
42 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs371472715 CA340711740 |
42 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA889985 rs770318000 |
43 | T>S | No |
ClinGen ExAC gnomAD |
|
CA889986 rs776096406 |
44 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
TCGA novel | 46 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs199999287 CA889988 |
46 | W>R | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 49 | S>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA889989 rs751654930 |
51 | E>K | No |
ClinGen ExAC gnomAD |
|
rs573668795 CA340711811 |
53 | N>I | No |
ClinGen gnomAD |
|
rs573668795 CA24212673 |
53 | N>S | No |
ClinGen gnomAD |
|
rs1189134585 CA340711815 |
54 | K>E | No |
ClinGen TOPMed gnomAD |
|
CA340711814 rs1189134585 |
54 | K>Q | No |
ClinGen TOPMed gnomAD |
|
CA890015 rs752547802 |
56 | S>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs1434161407 CA340711961 |
57 | Y>C | No |
ClinGen gnomAD |
|
CA340711955 rs1386169303 |
57 | Y>N | No |
ClinGen gnomAD |
|
TCGA novel | 64 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 64 | M>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs751549839 CA890018 |
64 | M>T | No |
ClinGen ExAC gnomAD |
|
rs184990049 COSM1178132 CA890017 |
64 | M>V | prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
CA340712061 rs1312107782 |
65 | N>S | No |
ClinGen gnomAD |
|
COSM78429 CA890019 rs749580497 |
69 | T>M | ovary Variant assessed as Somatic; 0.0 impact. large_intestine prostate breast [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs778558577 CA890021 |
71 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1208524257 CA340712169 |
74 | T>I | No |
ClinGen TOPMed |
|
rs745463902 CA24216940 |
78 | H>R | No |
ClinGen Ensembl |
|
CA24216941 rs947526527 |
80 | K>Q | No |
ClinGen Ensembl |
|
rs1318530928 CA340712208 |
80 | K>R | No |
ClinGen gnomAD |
|
CA24216942 rs1027480793 |
84 | N>K | No |
ClinGen TOPMed |
|
CA340712246 rs1316582696 |
86 | P>L | No |
ClinGen TOPMed |
|
rs780550777 CA890023 |
86 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 88 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs749661972 CA890024 |
90 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs139072514 CA890025 |
90 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs139072514 CA890026 |
90 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs749661972 CA340712267 |
90 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1409367501 CA340712273 |
91 | W>S | No |
ClinGen gnomAD |
|
rs1456476828 CA340712284 |
92 | F>L | No |
ClinGen TOPMed gnomAD |
|
rs1468696500 CA340712290 |
93 | K>R | No |
ClinGen gnomAD |
|
CA340712304 rs1176909800 |
95 | D>Y | No |
ClinGen gnomAD |
|
CA340712318 rs1557626747 |
97 | P>S | No |
ClinGen Ensembl |
|
CA890028 rs200761925 |
103 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs774974487 CA24216943 |
103 | R>W | No |
ClinGen gnomAD |
|
rs773348330 CA890029 |
108 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs1007417651 CA24216945 |
111 | I>V | No |
ClinGen Ensembl |
|
rs149906086 CA890033 |
112 | Y>C | No |
ClinGen ESP ExAC gnomAD |
|
COSM1343845 rs757219208 CA890036 |
115 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA24216946 rs1022847057 |
115 | R>W | No |
ClinGen TOPMed |
|
rs370299866 CA890038 |
117 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs199925889 COSM166935 CA890037 |
117 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
CA340712440 rs1569628602 |
118 | I>V | No |
ClinGen Ensembl |
|
rs867084474 CA24216948 |
122 | D>N | No |
ClinGen TOPMed |
|
TCGA novel | 128 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA890043 rs376343085 |
132 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1472682924 CA340712553 |
134 | T>I | No |
ClinGen TOPMed |
|
CA340712565 rs1162861035 |
136 | G>D | No |
ClinGen gnomAD |
|
CA340712588 rs1569628739 |
139 | V>G | No |
ClinGen Ensembl |
|
rs371038020 CA24216949 |
139 | V>M | No |
ClinGen ESP gnomAD |
|
rs1569628789 CA340712594 |
140 | V>G | No |
ClinGen Ensembl |
|
VAR_041779 | 144 | G>E | a metastatic melanoma sample; somatic mutation [UniProt] | No | UniProt |
CA24216951 rs542185636 |
149 | K>T | No |
ClinGen Ensembl |
|
CA890049 rs776665368 COSM1343847 |
150 | F>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
VAR_041780 | 150 | F>L | an ovarian mucinous carcinoma sample; somatic mutation [UniProt] | No | UniProt |
CA340712657 rs776665368 |
150 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA340712677 rs1449539205 |
151 | G>D | No |
ClinGen gnomAD |
|
TCGA novel | 153 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA340712695 rs1307724665 |
154 | P>L | No |
ClinGen TOPMed |
|
CA890064 rs748593216 |
156 | A>G | No |
ClinGen ExAC gnomAD |
|
rs1466132520 CA340712709 |
157 | S>G | No |
ClinGen TOPMed gnomAD |
|
rs1186570852 CA340712720 |
158 | P>L | No |
ClinGen gnomAD |
|
rs758869482 CA890065 |
161 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890094 rs571667839 |
165 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
TCGA novel | 174 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA890096 rs781314810 |
176 | I>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 180 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA340643825 rs1441887932 |
182 | I>T | No |
ClinGen gnomAD |
|
CA340643894 rs773146068 |
185 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890099 rs760676948 |
185 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs773146068 CA890098 |
185 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890100 rs770949333 |
186 | T>A | No |
ClinGen ExAC gnomAD |
|
rs369713266 CA890101 |
187 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA890102 COSM1503479 rs759045335 |
189 | M>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs1171302233 CA340644032 |
190 | E>G | No |
ClinGen TOPMed gnomAD |
|
CA890103 rs764673539 |
193 | H>Q | No |
ClinGen ExAC gnomAD |
|
CA340644239 rs1308119364 |
198 | I>V | No |
ClinGen gnomAD |
|
CA340644330 rs1344412113 |
201 | Q>R | No |
ClinGen TOPMed |
|
rs1371948012 CA340644366 |
202 | I>M | No |
ClinGen gnomAD |
|
rs752285907 CA890104 |
204 | A>S | No |
ClinGen ExAC gnomAD |
|
CA340645316 rs762201037 |
207 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762201037 CA890125 |
207 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1414955334 CA340645328 |
208 | M>V | No |
ClinGen Ensembl |
|
CA340645372 rs1208361213 |
211 | T>A | No |
ClinGen gnomAD |
|
CA23855794 rs150434521 |
218 | K>N | No |
ClinGen ESP TOPMed gnomAD |
|
TCGA novel | 219 | C>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA340645648 rs1230166581 |
223 | A>V | No |
ClinGen TOPMed |
|
rs756584494 CA890128 COSM1687828 |
225 | P>S | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs1447093286 CA340645762 |
227 | L>P | No |
ClinGen gnomAD |
|
TCGA novel | 229 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA340645876 rs1459126451 |
230 | Y>C | No |
ClinGen TOPMed gnomAD |
|
rs766562111 CA890129 |
230 | Y>H | No |
ClinGen ExAC gnomAD |
|
CA23855817 rs755218833 |
233 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890131 rs755218833 |
233 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs866948780 CA23855802 |
233 | P>S | No |
ClinGen Ensembl |
|
rs780850122 CA890135 |
236 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1298534205 CA340646125 |
238 | T>I | No |
ClinGen TOPMed |
|
CA340646161 rs1265137761 |
241 | V>A | No |
ClinGen gnomAD |
|
rs371024298 CA890138 |
241 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA890140 rs528483506 |
245 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs773947275 CA890141 |
245 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs761386607 CA890142 COSM1343851 |
249 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA890143 rs772790687 |
249 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890145 rs761232470 COSM911499 |
250 | D>N | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs761232470 CA340646366 |
250 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 254 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA890147 rs754426792 |
257 | N>S | No |
ClinGen ExAC gnomAD |
|
CA340646539 rs1386277195 |
258 | V>I | No |
ClinGen gnomAD |
|
rs182196435 CA890148 |
261 | Q>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA23855971 rs962502320 |
262 | T>I | No |
ClinGen TOPMed |
|
CA890149 rs765418911 |
264 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890152 rs367863302 |
265 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs374301942 CA890151 |
265 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA23855980 rs868840161 |
268 | R>G | No |
ClinGen Ensembl |
|
CA890153 rs750230725 |
270 | N>I | No |
ClinGen ExAC gnomAD |
|
CA890154 rs756017115 |
272 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA340646938 rs1339735032 |
272 | M>T | No |
ClinGen TOPMed |
|
CA890155 rs756017115 |
272 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 275 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs866002946 CA23856013 |
275 | M>T | No |
ClinGen TOPMed |
|
rs749248635 CA890156 |
281 | N>T | No |
ClinGen ExAC gnomAD |
|
CA890159 rs747832417 |
284 | D>A | No |
ClinGen ExAC gnomAD |
|
CA890157 rs561785581 |
284 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA890158 rs561785581 |
284 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA890160 rs771680690 |
286 | P>R | No |
ClinGen ExAC gnomAD |
|
CA340647288 rs1569843137 |
287 | Q>E | No |
ClinGen Ensembl |
|
CA890161 rs773595083 |
287 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA340647311 rs1330482703 |
288 | P>S | No |
ClinGen TOPMed |
|
CA340647336 rs1461625744 |
290 | S>G | No |
ClinGen TOPMed |
|
rs760907729 CA890162 |
290 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs771442565 CA890163 |
291 | P>A | No |
ClinGen ExAC gnomAD |
|
rs771442565 CA890164 |
291 | P>S | No |
ClinGen ExAC gnomAD |
|
rs1302352496 CA340647409 |
293 | A>S | No |
ClinGen TOPMed gnomAD |
|
CA340647412 rs1302352496 |
293 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA890165 rs760121416 |
294 | A>T | No |
ClinGen ExAC gnomAD |
|
CA890166 rs765400955 |
294 | A>V | Variant assessed as Somatic; 4.621e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA340647456 rs1220206919 |
295 | N>S | No |
ClinGen gnomAD |
|
rs200894406 CA890168 |
298 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA340647549 rs1432743881 |
298 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
VAR_041781 | 301 | I>V | a renal clear cell carcinoma sample; somatic mutation [UniProt] | No | UniProt |
rs1310969798 CA340647645 |
302 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA890169 rs367650272 |
303 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
CA340647660 rs1475889901 |
303 | M>V | No |
ClinGen Ensembl |
|
rs770943198 CA23856168 |
305 | D>E | No |
ClinGen TOPMed gnomAD |
|
CA340649079 rs1418989849 |
310 | N>S | No |
ClinGen gnomAD |
|
rs200586005 CA890185 |
311 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1282660832 CA340649128 |
312 | K>R | No |
ClinGen gnomAD |
|
CA340649144 rs1167240495 |
313 | C>* | No |
ClinGen gnomAD |
|
CA23858179 rs773172264 |
320 | D>Y | No |
ClinGen TOPMed gnomAD |
|
CA890187 rs189581966 |
322 | R>Q | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
rs1368004857 CA340649278 |
322 | R>W | No |
ClinGen TOPMed gnomAD |
|
rs1294778764 CA340649292 |
323 | G>E | No |
ClinGen gnomAD |
|
CA890191 rs150545478 |
325 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA890192 rs150545478 |
325 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA340649347 rs1319670166 |
327 | V>M | No |
ClinGen TOPMed gnomAD |
|
rs369927901 CA890194 |
328 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1456472965 CA340649404 |
330 | S>L | No |
ClinGen TOPMed |
|
COSM1224136 CA890195 rs527657528 |
332 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
CA890196 rs549660782 |
332 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA340649426 rs549660782 |
332 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA340649421 rs527657528 |
332 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA890199 rs538537239 |
340 | Q>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs781670093 CA890200 |
341 | Y>H | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 342 | P>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 343 | H>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs202031020 CA23858278 |
346 | T>A | No |
ClinGen 1000Genomes gnomAD |
|
TCGA novel | 347 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1456111684 CA340649671 |
347 | F>L | No |
ClinGen gnomAD |
|
CA340649701 rs201706633 |
349 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs201706633 CA890203 |
349 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA340649691 rs147878288 |
349 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA890202 rs147878288 |
349 | A>T | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
rs200074680 CA890205 |
350 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890204 rs749817873 |
350 | L>V | No |
ClinGen ExAC gnomAD |
|
CA23858314 rs867500485 COSM228794 |
351 | R>C | Variant assessed as Somatic; impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
rs141411649 CA890206 |
351 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs201109068 CA23858340 |
353 | P>S | No |
ClinGen Ensembl |
|
rs767776422 CA890208 |
359 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA23858352 rs267598688 |
360 | S>F | No |
ClinGen Ensembl |
|
CA340649936 rs1180719706 |
363 | R>C | No |
ClinGen TOPMed |
|
CA340649939 rs1283520472 |
363 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs778582883 CA23858374 |
367 | N>Y | No |
ClinGen gnomAD |
|
CA340650021 rs1249904351 |
368 | Q>E | No |
ClinGen TOPMed |
|
rs911808808 CA23858383 |
370 | E>K | No |
ClinGen TOPMed |
|
rs1475008060 CA340650091 |
371 | A>P | No |
ClinGen gnomAD |
|
rs1475008060 CA340650089 |
371 | A>T | No |
ClinGen gnomAD |
|
CA890211 rs765093788 |
372 | P>S | No |
ClinGen ExAC gnomAD |
|
CA340650162 rs1210516202 |
376 | T>I | No |
ClinGen TOPMed |
|
CA340650184 rs1471843345 |
379 | E>G | No |
ClinGen gnomAD |
|
CA340650182 rs1414634654 |
379 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
TCGA novel | 380 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA340650191 rs1158466979 |
380 | N>T | No |
ClinGen gnomAD |
|
rs1426525481 CA340650203 |
381 | F>L | No |
ClinGen gnomAD |
|
rs1414483184 CA340650207 |
382 | K>E | No |
ClinGen gnomAD |
|
TCGA novel | 387 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1557672057 CA340650296 |
388 | I>F | No |
ClinGen Ensembl |
|
rs928677318 CA23858412 |
389 | P>S | No |
ClinGen TOPMed gnomAD |
|
CA23858418 rs938683403 |
390 | A>T | No |
ClinGen Ensembl |
|
rs763495095 | 391 | C>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
rs1352060656 CA340650349 |
392 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs1195511155 CA340652862 |
393 | S>A | No |
ClinGen gnomAD |
|
CA340652993 rs1453213231 |
399 | K>* | No |
ClinGen gnomAD |
|
rs1319294388 CA340653036 |
401 | K>N | No |
ClinGen TOPMed |
|
CA23872464 rs1033617119 |
401 | K>R | No |
ClinGen TOPMed |
|
CA890229 rs769470817 |
402 | M>T | No |
ClinGen ExAC |
|
rs1188652134 CA340653042 |
402 | M>V | No |
ClinGen gnomAD |
|
CA890230 rs775410714 |
403 | E>Q | No |
ClinGen ExAC gnomAD |
|
rs762775669 CA890231 |
404 | I>V | No |
ClinGen ExAC gnomAD |
|
CA340653127 rs751575760 |
407 | I>L | No |
ClinGen ExAC gnomAD |
|
CA890233 rs751575760 |
407 | I>V | No |
ClinGen ExAC gnomAD |
|
CA890235 rs767151652 |
410 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890236 rs750033689 |
413 | A>T | No |
ClinGen ExAC gnomAD |
|
rs1226940050 CA340653288 |
416 | L>P | No |
ClinGen gnomAD |
|
CA890238 rs377433146 |
416 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
rs754278490 CA890239 |
418 | I>T | No |
ClinGen ExAC gnomAD |
|
CA23872554 rs552750946 |
418 | I>V | No |
ClinGen TOPMed gnomAD |
|
CA340653337 rs1212231082 |
419 | A>T | No |
ClinGen gnomAD |
|
rs755410455 CA890240 |
419 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1249335229 CA340653385 |
421 | L>P | No |
ClinGen gnomAD |
|
CA23872615 rs1049947936 |
422 | F>V | No |
ClinGen Ensembl |
|
CA340653450 rs1424304034 |
424 | F>S | No |
ClinGen TOPMed |
|
rs748666942 CA890243 |
425 | I>L | No |
ClinGen ExAC gnomAD |
|
rs1008329805 CA23872637 |
427 | V>A | No |
ClinGen Ensembl |
|
rs201506341 CA890245 |
427 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA890247 rs771229553 |
429 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890246 rs747183915 |
429 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA340653585 rs1187742063 |
430 | N>Y | No |
ClinGen TOPMed |
|
rs775112425 CA890248 |
432 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890249 rs371110337 |
435 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA890251 rs139114952 COSM426576 |
436 | S>L | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
CA23872706 rs866264701 |
437 | A>T | No |
ClinGen Ensembl |
|
rs887718218 CA23872714 |
438 | P>A | No |
ClinGen Ensembl |
|
rs186939505 CA890254 |
439 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
TCGA novel | 440 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1231769161 CA340653884 |
440 | Q>R | No |
ClinGen gnomAD |
|
rs150047255 CA890255 |
443 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs150047255 CA340653948 |
443 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs200262178 CA890256 |
445 | H>D | No |
ClinGen 1000Genomes ExAC |
|
rs753466455 CA890258 |
445 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890259 rs546813526 |
446 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA23872771 rs1055996290 |
447 | R>S | No |
ClinGen TOPMed |
|
rs753197736 CA890260 |
451 | V>I | No |
ClinGen ExAC gnomAD |
|
CA890262 rs777805288 |
452 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1041441197 CA23872789 |
455 | M>V | No |
ClinGen TOPMed gnomAD |
|
rs1472818505 CA340654260 |
459 | Y>C | No |
ClinGen TOPMed gnomAD |
|
CA890283 rs781140056 |
469 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA340641315 rs1349362602 |
470 | L>P | No |
ClinGen gnomAD |
|
rs1279093331 CA340641340 |
472 | A>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1231463046 CA340641338 |
472 | A>S | No |
ClinGen gnomAD |
|
rs1279093331 CA340641342 |
472 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA890284 COSM911500 rs143592714 |
474 | R>C | Variant assessed as Somatic; 0.0003702 impact. oesophagus endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
CA890285 rs151022507 |
474 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs949069788 CA23841079 |
476 | M>I | No |
ClinGen TOPMed gnomAD |
|
CA890286 rs778832196 |
476 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890287 rs747997709 |
478 | E>A | No |
ClinGen ExAC gnomAD |
|
CA340641451 rs1254849622 |
480 | G>A | No |
ClinGen gnomAD |
|
CA340641477 rs773155144 |
482 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890289 rs773155144 |
482 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs746934511 CA890290 |
482 | C>W | No |
ClinGen ExAC gnomAD |
|
CA340641519 rs1569892663 |
483 | A>V | No |
ClinGen Ensembl |
|
rs1203427077 CA340641568 |
486 | K>E | No |
ClinGen TOPMed |
|
CA890291 rs770469053 |
487 | I>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 488 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1321770403 CA340641662 |
489 | K>E | No |
ClinGen TOPMed |
|
CA340641700 rs1042641340 |
490 | G>A | No |
ClinGen gnomAD |
|
rs1042641340 CA23841118 |
490 | G>D | No |
ClinGen gnomAD |
|
CA890292 rs776063163 |
491 | H>Q | No |
ClinGen ExAC gnomAD |
|
rs1294147440 CA340641732 |
492 | L>F | No |
ClinGen gnomAD |
|
rs1569892754 CA340641790 |
495 | P>L | No |
ClinGen Ensembl |
|
TCGA novel | 496 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs764905844 CA890294 |
497 | M>T | No |
ClinGen ExAC gnomAD |
|
rs759165636 CA890293 |
497 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA340641857 rs1302055660 |
498 | D>E | No |
ClinGen gnomAD |
|
rs1569892814 CA340641885 |
500 | A>T | No |
ClinGen Ensembl |
|
rs374889434 TCGA novel CA23841152 |
501 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen ESP ExAC TOPMed gnomAD |
CA340641937 rs1215942100 |
503 | V>F | No |
ClinGen gnomAD |
|
TCGA novel | 504 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs763251340 CA890296 |
504 | A>V | No |
ClinGen ExAC gnomAD |
|
rs764377619 CA890297 |
511 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890299 rs757773337 |
512 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890300 rs767626099 |
513 | N>K | No |
ClinGen ExAC gnomAD |
|
CA890301 rs201679982 |
514 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs541891855 CA890302 |
515 | Q>R | No |
ClinGen 1000Genomes ExAC |
|
CA890303 rs780383456 |
517 | W>C | No |
ClinGen ExAC gnomAD |
|
CA890305 rs7527017 |
518 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA890304 VAR_041782 rs7527017 |
518 | T>M | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs746949797 CA890307 |
519 | E>K | No |
ClinGen ExAC gnomAD |
|
CA340642224 rs1197518044 |
519 | E>V | No |
ClinGen gnomAD |
|
CA890308 rs770822206 |
524 | A>G | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 526 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA890310 rs41305848 |
529 | E>K | No |
ClinGen ExAC |
|
rs1384476859 CA340642383 |
530 | L>V | No |
ClinGen TOPMed |
|
TCGA novel | 532 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1461365096 CA340642420 |
533 | P>H | No |
ClinGen gnomAD |
|
rs769312466 CA890311 |
534 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 538 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs545865972 CA340642478 |
539 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA340642494 rs1557685640 |
541 | A>T | No |
ClinGen Ensembl |
|
COSM426578 CA890314 rs139362871 |
542 | V>I | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
CA340642530 rs1360860093 |
544 | Q>* | No |
ClinGen gnomAD |
|
rs1228611093 CA340642533 |
544 | Q>R | No |
ClinGen gnomAD |
|
CA890315 rs137874089 |
547 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs137874089 CA890316 |
547 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA23841239 rs144836526 |
550 | M>L | No |
ClinGen ESP TOPMed |
|
CA340642630 rs1232568707 |
552 | F>S | No |
ClinGen gnomAD |
|
TCGA novel | 555 | I>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA890318 rs750999419 |
558 | G>E | No |
ClinGen ExAC gnomAD |
|
rs1268723749 CA340642703 |
558 | G>R | No |
ClinGen gnomAD |
|
CA23841263 rs142012034 |
561 | H>R | No |
ClinGen ESP |
|
COSM32478 CA340642756 rs760789417 VAR_035713 |
562 | E>D | breast a breast cancer sample; somatic mutation [Cosmic, UniProt] | No |
ClinGen cosmic curated UniProt ExAC TOPMed dbSNP gnomAD |
rs755212044 CA890322 |
565 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs140939080 CA890321 |
565 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1306813734 CA340642795 |
566 | M>V | No |
ClinGen TOPMed |
|
VAR_041783 | 567 | R>I | a colorectal adenocarcinoma sample; somatic mutation [UniProt] | No | UniProt |
rs139252286 CA890323 |
567 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs376139385 CA23841331 |
568 | S>A | No |
ClinGen ESP TOPMed gnomAD |
|
rs1160505467 CA340642843 |
568 | S>C | No |
ClinGen gnomAD |
|
CA340642836 rs376139385 |
568 | S>P | No |
ClinGen ESP TOPMed gnomAD |
|
rs376139385 CA23841317 |
568 | S>T | No |
ClinGen ESP TOPMed gnomAD |
|
rs1026797956 CA23841343 |
574 | G>D | No |
ClinGen Ensembl |
|
TCGA novel | 576 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA890324 rs149994380 |
576 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA340642975 rs142231029 |
577 | S>C | No |
ClinGen ESP ExAC gnomAD |
|
CA890325 rs142231029 |
577 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
CA890326 rs781055151 |
578 | D>E | No |
ClinGen ExAC gnomAD |
|
rs1344164011 CA340643007 |
579 | E>* | No |
ClinGen gnomAD |
|
rs1298707775 CA340643028 |
580 | D>G | No |
ClinGen TOPMed |
|
CA340643021 rs1557685750 |
580 | D>N | No |
ClinGen Ensembl |
|
rs1263110143 CA340643061 |
583 | V>L | No |
ClinGen TOPMed gnomAD |
|
rs1263110143 CA340643060 |
583 | V>M | No |
ClinGen TOPMed gnomAD |
|
rs200565723 CA23841404 |
585 | S>F | No |
ClinGen TOPMed |
|
CA340643101 rs1353284597 |
586 | S>I | No |
ClinGen TOPMed gnomAD |
|
rs1433573112 CA340643137 |
589 | H>P | No |
ClinGen TOPMed |
|
rs1283632499 CA340643155 |
590 | G>E | No |
ClinGen gnomAD |
|
CA890330 rs374512783 COSM273724 |
590 | G>R | ovary Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
rs768246511 CA890331 |
591 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 591 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA890332 rs774750393 |
596 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762044481 CA890333 |
597 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1485218468 CA340643295 |
598 | Q>E | No |
ClinGen TOPMed |
|
rs1485522234 CA340643335 |
601 | A>G | No |
ClinGen gnomAD |
|
TCGA novel | 604 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA340643386 rs1183372557 |
604 | E>V | No |
ClinGen gnomAD |
|
CA340643469 rs1235037457 |
609 | H>R | No |
ClinGen gnomAD |
|
rs772510314 CA340643500 |
610 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890335 rs773798754 |
611 | F>L | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 614 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 615 | D>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA890336 COSM1296639 rs761270555 |
619 | R>C | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA890338 rs754019666 |
620 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs759772996 CA890339 |
621 | I>T | No |
ClinGen ExAC gnomAD |
|
CA23841446 rs917654975 |
623 | I>M | No |
ClinGen gnomAD |
|
CA890341 rs752982447 |
623 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs55832740 VAR_041784 CA890342 |
624 | G>R | No |
ClinGen UniProt ExAC dbSNP gnomAD |
|
rs750353879 CA890344 |
625 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890343 rs780967337 |
625 | E>G | No |
ClinGen ExAC gnomAD |
|
rs1569893533 CA340643766 |
625 | E>Q | No |
ClinGen Ensembl |
|
rs917865228 CA23841482 |
628 | H>L | No |
ClinGen TOPMed gnomAD |
|
CA23841480 rs917865228 |
628 | H>R | No |
ClinGen TOPMed gnomAD |
|
CA890345 rs756104727 |
629 | V>I | No |
ClinGen ExAC gnomAD |
|
CA340643931 rs1206225008 |
634 | L>F | No |
ClinGen TOPMed gnomAD |
|
CA23841494 rs549316569 COSM194096 |
639 | E>K | large_intestine [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA340644031 rs1173792646 |
640 | I>M | No |
ClinGen TOPMed |
|
CA890347 COSM194097 rs748792506 |
643 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
VAR_041785 rs34109134 CA890349 |
646 | Y>C | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs754551829 CA890348 |
646 | Y>H | No |
ClinGen ExAC gnomAD |
|
CA340644143 rs1454286135 |
647 | R>G | No |
ClinGen gnomAD |
|
rs1569893678 CA340644159 |
648 | V>I | No |
ClinGen Ensembl |
|
CA23841522 rs924942922 |
649 | Q>K | No |
ClinGen TOPMed |
|
CA23841528 rs137965709 |
650 | S>G | No |
ClinGen ESP gnomAD |
|
rs34743018 CA340644283 |
654 | L>M | No |
ClinGen gnomAD |
|
rs1408030276 CA340644303 |
656 | I>V | No |
ClinGen gnomAD |
|
rs866734548 COSM3805759 CA23841541 |
657 | R>C | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
rs1328044467 CA340644331 |
657 | R>H | No |
ClinGen gnomAD |
|
rs747494785 CA890353 |
661 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890354 rs771604043 |
663 | A>T | No |
ClinGen ExAC gnomAD |
|
CA890355 rs777308172 |
664 | I>V | No |
ClinGen ExAC gnomAD |
|
rs147335786 CA890356 |
665 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 665 | M>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs150076103 CA340644465 |
665 | M>R | No |
ClinGen ESP TOPMed gnomAD |
|
CA23841560 rs150076103 |
665 | M>T | No |
ClinGen ESP TOPMed gnomAD |
|
CA340644460 rs1182989456 |
665 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA890357 COSM257913 rs765369536 |
669 | F>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA890358 rs550656659 |
672 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs779492358 CA340644528 |
674 | D>A | No |
ClinGen gnomAD |
|
CA23841589 rs779492358 |
674 | D>G | No |
ClinGen gnomAD |
|
rs1470214328 CA340644557 |
676 | W>L | No |
ClinGen gnomAD |
|
CA340644549 rs1225274668 |
676 | W>R | No |
ClinGen TOPMed |
|
rs750270347 CA890361 |
684 | E>D | No |
ClinGen ExAC |
|
CA890362 rs756018733 |
685 | I>F | No |
ClinGen ExAC gnomAD |
|
rs766267757 CA890363 |
686 | F>L | No |
ClinGen ExAC |
|
rs753836146 CA890364 |
687 | S>I | No |
ClinGen ExAC gnomAD |
|
CA890365 rs753836146 |
687 | S>N | No |
ClinGen ExAC gnomAD |
|
rs200464688 CA890366 |
688 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA890367 rs747753533 |
689 | G>* | No |
ClinGen ExAC |
|
rs758171417 CA890368 |
689 | G>A | No |
ClinGen ExAC gnomAD |
|
rs758171417 CA890369 |
689 | G>E | No |
ClinGen ExAC gnomAD |
|
rs758171417 CA890370 |
689 | G>V | No |
ClinGen ExAC gnomAD |
|
CA890373 rs77765573 |
690 | L>P | No |
ClinGen ExAC gnomAD |
|
rs1167112729 CA340644713 |
690 | L>V | No |
ClinGen gnomAD |
|
rs1323869137 CA340644728 |
691 | Q>H | No |
ClinGen gnomAD |
|
CA340644739 rs1393794291 |
693 | Y>H | No |
ClinGen gnomAD |
|
rs932155664 CA340644797 |
697 | S>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs932155664 CA23841671 |
697 | S>N | No |
ClinGen gnomAD |
|
rs1557686024 CA340644854 |
702 | I>T | No |
ClinGen Ensembl |
|
TCGA novel | 703 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1324911869 CA340644875 |
704 | M>V | No |
ClinGen gnomAD |
|
rs886575810 CA23841672 |
705 | V>M | No |
ClinGen TOPMed gnomAD |
|
rs763066966 CA890376 |
708 | R>P | No |
ClinGen ExAC gnomAD |
|
CA23841673 rs746369763 |
708 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA340644935 rs1569894068 |
710 | L>V | No |
ClinGen Ensembl |
|
rs1569894080 CA340645689 |
713 | C>R | No |
ClinGen Ensembl |
|
CA890378 rs774590418 |
713 | C>S | No |
ClinGen ExAC gnomAD |
|
rs774590418 CA340645691 |
713 | C>Y | No |
ClinGen ExAC gnomAD |
|
rs1557686064 CA340645739 |
715 | E>G | No |
ClinGen Ensembl |
|
CA340645725 rs1169313694 |
715 | E>K | No |
ClinGen TOPMed |
|
rs368470925 CA890379 |
716 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA340645785 rs1372046125 |
717 | C>Y | No |
ClinGen TOPMed |
|
CA890380 rs766175435 |
719 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA340645833 rs1444918893 |
719 | P>H | No |
ClinGen TOPMed gnomAD |
|
rs1444918893 CA340645840 |
719 | P>L | No |
ClinGen TOPMed gnomAD |
|
CA890381 rs766175435 |
719 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1241838841 CA340645850 |
720 | R>K | No |
ClinGen TOPMed |
|
rs1183310745 CA340645875 |
721 | M>I | No |
ClinGen TOPMed |
|
rs1484670633 CA340645881 |
722 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA890382 rs371601159 |
723 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA340645928 rs1252879372 |
724 | L>F | No |
ClinGen TOPMed |
|
CA340645996 rs1476090584 |
726 | T>R | No |
ClinGen gnomAD |
|
CA340646156 rs1417092760 |
733 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA340646194 rs1454313375 |
735 | R>S | No |
ClinGen gnomAD |
|
CA23841745 rs1016444871 |
737 | P>R | No |
ClinGen TOPMed gnomAD |
|
rs777518583 CA340646215 |
737 | P>S | No |
ClinGen ExAC gnomAD |
|
CA890386 rs777518583 |
737 | P>T | No |
ClinGen ExAC gnomAD |
|
rs1004894735 CA23841756 |
738 | R>G | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 738 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 739 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1313760185 CA340646239 |
739 | F>L | No |
ClinGen gnomAD |
|
rs751270560 CA890387 |
740 | K>R | No |
ClinGen ExAC gnomAD |
|
rs1312856035 CA340646269 |
741 | D>H | No |
ClinGen TOPMed |
|
rs757625475 CA890388 |
742 | I>T | No |
ClinGen ExAC gnomAD |
|
CA890391 rs770384961 |
744 | V>D | No |
ClinGen ExAC gnomAD |
|
CA890390 rs150607362 |
744 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs1215407083 CA340646347 |
745 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA340646346 rs1347989871 |
745 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA890392 rs779969182 |
747 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1026892288 CA23841793 |
747 | R>L | No |
ClinGen TOPMed gnomAD |
|
CA340646360 COSM681507 rs1026892288 |
747 | R>Q | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
CA890393 rs779969182 |
747 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890394 rs768750350 |
754 | S>N | No |
ClinGen ExAC gnomAD |
|
rs1419583877 CA340646497 |
754 | S>R | No |
ClinGen gnomAD |
|
CA23841842 rs769720341 |
756 | T>A | No |
ClinGen Ensembl |
|
CA340646556 rs1161258603 |
757 | S>G | No |
ClinGen gnomAD |
|
TCGA novel CA340646587 rs1362103243 |
757 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen TOPMed gnomAD |
rs1557686200 CA340646633 |
759 | T>A | No |
ClinGen Ensembl |
|
CA340646684 rs1174442254 |
760 | T>I | No |
ClinGen gnomAD |
|
TCGA novel | 761 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 761 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA890397 rs762027398 |
763 | G>R | No |
ClinGen ExAC gnomAD |
|
CA890396 rs762027398 |
763 | G>W | No |
ClinGen ExAC gnomAD |
|
CA890398 rs776549301 |
764 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA23841877 rs959492533 |
765 | N>H | No |
ClinGen TOPMed gnomAD |
|
rs959492533 CA340646788 |
765 | N>Y | No |
ClinGen TOPMed gnomAD |
|
CA340646853 rs1393625140 |
768 | T>A | No |
ClinGen gnomAD |
|
rs879156927 CA23841887 |
769 | Q>K | No |
ClinGen Ensembl |
|
CA340646910 rs1305550222 |
770 | T>K | No |
ClinGen gnomAD |
|
CA890400 rs759359203 |
771 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs765179740 CA890401 |
771 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
VAR_041786 | 776 | S>N | a colorectal adenocarcinoma sample; somatic mutation [UniProt] | No | UniProt |
rs1208349445 CA340647049 |
779 | S>G | No |
ClinGen gnomAD |
|
CA340647068 rs1255168971 |
780 | N>D | No |
ClinGen gnomAD |
|
CA890404 rs763697690 |
784 | P>H | No |
ClinGen ExAC gnomAD |
|
rs1179915465 CA340647141 |
784 | P>T | No |
ClinGen TOPMed |
|
CA340647154 rs1178838118 |
785 | R>G | No |
ClinGen gnomAD |
|
CA890405 rs369710390 |
787 | P>A | No |
ClinGen ESP ExAC gnomAD |
|
CA890406 rs369710390 |
787 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
rs1439100275 CA340647250 |
789 | Y>C | No |
ClinGen gnomAD |
|
CA340647273 COSM95203 rs1397040951 |
790 | M>I | breast [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs1013869913 CA23841940 |
790 | M>V | No |
ClinGen TOPMed gnomAD |
|
rs781386495 CA890407 |
791 | F>I | No |
ClinGen ExAC gnomAD |
|
CA890408 rs372821612 |
792 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs780566089 CA890410 |
795 | G>S | No |
ClinGen ExAC gnomAD |
|
CA340647426 rs1396433010 |
797 | T>I | No |
ClinGen gnomAD |
|
CA340647428 rs1396433010 |
797 | T>K | No |
ClinGen gnomAD |
|
CA340647474 rs377219658 |
799 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA340647475 rs199711517 |
800 | G>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA890415 rs748358446 |
800 | G>D | No |
ClinGen ExAC gnomAD |
|
rs199711517 CA890414 |
800 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA890413 rs199711517 |
800 | G>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs370118295 CA890416 |
802 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 804 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA23841993 rs867710042 |
804 | G>V | No |
ClinGen Ensembl |
|
CA890417 rs773335329 |
806 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1249479231 CA340647604 |
807 | G>A | No |
ClinGen gnomAD |
|
CA890418 rs551069295 |
808 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs139700294 CA340647657 |
810 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA890421 rs139700294 |
810 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs201257776 CA890422 |
815 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA890423 rs201257776 |
815 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA340647788 rs957716422 |
817 | I>F | No |
ClinGen TOPMed gnomAD |
|
rs761528173 CA890424 |
817 | I>M | No |
ClinGen ExAC gnomAD |
|
rs1430610195 CA340647793 |
817 | I>T | No |
ClinGen gnomAD |
|
CA23842013 rs957716422 |
817 | I>V | No |
ClinGen TOPMed gnomAD |
|
rs1423421156 CA340647809 |
818 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs767160165 CA890425 |
819 | I>V | No |
ClinGen ExAC gnomAD |
|
rs750067125 CA890426 |
822 | Y>H | No |
ClinGen ExAC gnomAD |
|
CA340647876 rs1292523058 |
823 | P>Q | No |
ClinGen gnomAD |
|
rs756443215 CA890427 |
824 | I>V | No |
ClinGen ExAC gnomAD |
|
CA340647895 rs1569894881 |
825 | P>T | No |
ClinGen Ensembl |
|
rs1569894912 CA340647937 |
828 | Y>* | No |
ClinGen Ensembl |
|
rs766661253 CA890428 |
829 | A>E | No |
ClinGen ExAC gnomAD |
|
CA890429 rs754343153 |
830 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs145004562 CA890431 |
833 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA890432 rs748182987 |
835 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 836 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs758427579 CA890433 |
838 | P>T | No |
ClinGen ExAC gnomAD |
|
rs1237808214 CA340648043 |
839 | T>A | No |
ClinGen gnomAD |
|
CA890434 rs777991189 |
840 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA340648051 rs1262878818 |
840 | G>V | No |
ClinGen gnomAD |
|
rs1475755069 CA340648063 |
842 | P>L | No |
ClinGen gnomAD |
|
CA890435 rs747196179 |
843 | R>K | No |
ClinGen ExAC gnomAD |
|
CA890436 rs149052330 |
844 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA890438 rs749214430 |
845 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890439 rs768752046 |
847 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA23842103 rs933094559 |
848 | C>R | No |
ClinGen TOPMed |
|
CA340648127 rs1286276716 |
852 | K>N | No |
ClinGen TOPMed |
|
rs1339556266 CA340648140 |
854 | R>P | No |
ClinGen TOPMed gnomAD |
|
rs1339556266 CA340648139 |
854 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA340648155 rs1332600221 |
857 | S>G | No |
ClinGen gnomAD |
|
rs1227741084 CA340648157 |
857 | S>N | No |
ClinGen gnomAD |
|
rs989718734 CA23842130 |
858 | S>C | No |
ClinGen TOPMed gnomAD |
|
rs1318852351 CA340648178 |
860 | S>N | No |
ClinGen gnomAD |
|
COSM911506 rs1213854684 CA340648192 |
862 | S>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs1466024955 CA340648207 |
864 | S>R | No |
ClinGen gnomAD |
|
CA890443 rs772855622 |
865 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs760315857 CA890444 |
870 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890445 rs766719846 |
871 | L>W | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM911507 CA890448 rs765681847 |
876 | S>F | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs1156409220 CA340648315 |
878 | Q>R | No |
ClinGen gnomAD |
|
CA340648382 rs1468493053 |
882 | I>T | No |
ClinGen TOPMed |
|
rs987622684 CA23842159 |
883 | P>L | No |
ClinGen gnomAD |
|
rs1569895305 CA340648491 |
890 | I>T | No |
ClinGen Ensembl |
|
CA890449 rs371018580 |
890 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA23842187 rs911967062 |
895 | G>D | No |
ClinGen TOPMed gnomAD |
|
CA340648569 rs1243738044 |
896 | G>E | No |
ClinGen TOPMed |
|
CA23842191 rs868806124 |
896 | G>R | No |
ClinGen Ensembl |
|
rs777777494 CA890451 |
898 | G>C | No |
ClinGen ExAC gnomAD |
|
rs747240620 CA890452 |
898 | G>D | No |
ClinGen ExAC gnomAD |
|
rs747240620 CA890453 |
898 | G>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 900 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA23842215 rs866094291 |
900 | T>I | No |
ClinGen Ensembl |
|
CA890456 rs749054305 |
901 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA890458 rs768596459 |
902 | F>L | No |
ClinGen ExAC gnomAD |
|
rs748040274 CA23842260 |
903 | G>D | No |
ClinGen ExAC gnomAD |
|
rs748040274 CA890459 |
903 | G>V | No |
ClinGen ExAC gnomAD |
|
rs771611543 CA890460 |
905 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA23842289 rs148190213 |
907 | Q>R | No |
ClinGen ESP TOPMed gnomAD |
|
rs1213361445 CA340648734 |
908 | K>I | No |
ClinGen gnomAD |
|
rs772658859 CA890461 |
909 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA340648744 rs772658859 |
909 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA890462 rs760355948 |
910 | Y>H | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 911 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1557686616 CA340648798 |
912 | I>T | No |
ClinGen Ensembl |
|
rs535561270 CA890463 |
913 | D>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA340648834 rs1470848991 |
916 | Q>H | No |
ClinGen TOPMed gnomAD |
|
CA890464 rs776286055 |
917 | A>T | No |
ClinGen ExAC gnomAD |
|
CA23842298 rs1036379468 |
918 | S>P | No |
ClinGen Ensembl |
|
CA890465 rs759833994 |
920 | L>I | No |
ClinGen ExAC gnomAD |
|
rs765587751 CA890466 |
920 | L>P | No |
ClinGen ExAC gnomAD |
|
CA23842317 rs899194498 |
921 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
CA890469 rs75566046 |
922 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA890467 rs772431647 |
922 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs202134610 CA890471 |
923 | A>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs751628611 CA890470 |
923 | A>T | No |
ClinGen ExAC gnomAD |
|
rs201401761 CA23842351 |
924 | N>S | No |
ClinGen Ensembl |
|
CA23842353 rs895769636 |
927 | G>A | No |
ClinGen TOPMed |
|
CA340648971 rs1557686683 |
928 | H>P | No |
ClinGen Ensembl |
|
CA890474 rs754753916 |
929 | T>S | No |
ClinGen ExAC |
|
rs1024769042 CA23842368 |
929 | T>S | No |
ClinGen TOPMed gnomAD |
|
CA890475 rs778919689 |
930 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA890476 rs748108402 |
930 | E>V | No |
ClinGen ExAC gnomAD |
|
CA340649006 rs771956421 |
931 | S>F | No |
ClinGen ExAC gnomAD |
|
CA890477 rs771956421 |
931 | S>Y | No |
ClinGen ExAC gnomAD |
|
rs1275647041 CA340649019 |
932 | M>I | No |
ClinGen gnomAD |
|
CA340649010 rs1396949011 |
932 | M>V | No |
ClinGen Ensembl |
|
rs906310411 CA23842393 |
935 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA890478 rs374252401 |
935 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
1 associated diseases with Q01973
[MIM: 617654]: Deafness, autosomal recessive, 108 (DFNB108)
A form of non-syndromic sensorineural hearing loss. Sensorineural deafness results from damage to the neural receptors of the inner ear, the nerve pathways to the brain, or the area of the brain that receives sound information. {ECO:0000269|PubMed:27162350}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A form of non-syndromic sensorineural hearing loss. Sensorineural deafness results from damage to the neural receptors of the inner ear, the nerve pathways to the brain, or the area of the brain that receives sound information. {ECO:0000269|PubMed:27162350}. Note=The disease is caused by variants affecting the gene represented in this entry.
10 regional properties for Q01973
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | Kringle | 310 - 393 | IPR000001 |
domain | Protein kinase domain | 473 - 746 | IPR000719 |
domain | Serine-threonine/tyrosine-protein kinase, catalytic domain | 474 - 746 | IPR001245 |
domain | Immunoglobulin subtype 2 | 70 - 138 | IPR003598 |
domain | Immunoglobulin subtype | 64 - 149 | IPR003599 |
domain | Immunoglobulin-like domain | 42 - 147 | IPR007110 |
active_site | Tyrosine-protein kinase, active site | 611 - 623 | IPR008266 |
domain | Immunoglobulin I-set | 61 - 143 | IPR013098 |
conserved_site | Kringle, conserved site | 361 - 374 | IPR018056 |
domain | Frizzled domain | 165 - 299 | IPR020067 |
7 GO annotations of cellular component
Name | Definition |
---|---|
axon terminus | Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters. The axon terminus is considered to be the whole region of thickening and the terminal button is a specialized region of it. |
cell surface | The external part of the cell wall and/or plasma membrane. |
cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
receptor complex | Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
stress fiber | A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber. |
5 GO annotations of molecular function
Name | Definition |
---|---|
ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
coreceptor activity involved in Wnt signaling pathway, planar cell polarity pathway | Any coreceptor activity that is involved in Wnt signaling pathway, planar cell polarity pathway. |
transmembrane receptor protein tyrosine kinase activity | Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate. |
Wnt receptor activity | Combining with a Wnt protein and transmitting the signal across the plasma membrane to initiate a change in cell activity. |
Wnt-protein binding | Binding to a Wnt-protein, a secreted growth factor involved in signaling. |
9 GO annotations of biological process
Name | Definition |
---|---|
astrocyte development | The process aimed at the progression of an astrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function. |
inner ear development | The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure. |
positive regulation of I-kappaB kinase/NF-kappaB signaling | Any process that activates or increases the frequency, rate or extent of I-kappaB kinase/NF-kappaB signaling. |
positive regulation of kinase activity | Any process that activates or increases the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
positive regulation of neuron projection development | Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). |
positive regulation of NF-kappaB transcription factor activity | Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB. |
positive regulation of phosphatidylinositol 3-kinase signaling | Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphatidylinositol 3-kinase cascade. |
sensory perception of sound | The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound. |
transmembrane receptor protein tyrosine kinase signaling pathway | The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription. |
79 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q91044 | NTRK3 | NT-3 growth factor receptor | Gallus gallus (Chicken) | SS |
Q91987 | NTRK2 | BDNF/NT-3 growth factors receptor | Gallus gallus (Chicken) | SS |
Q91009 | NTRK1 | High affinity nerve growth factor receptor | Gallus gallus (Chicken) | SS |
Q8AXY6 | MUSK | Muscle, skeletal receptor tyrosine protein kinase | Gallus gallus (Chicken) | SS |
Q5IS37 | NTRK3 | NT-3 growth factor receptor | Pan troglodytes (Chimpanzee) | SS |
Q9V6K3 | Nrk | Tyrosine-protein kinase transmembrane receptor Ror2 | Drosophila melanogaster (Fruit fly) | SS |
Q24488 | Ror | Tyrosine-protein kinase transmembrane receptor Ror | Drosophila melanogaster (Fruit fly) | SS |
P07949 | RET | Proto-oncogene tyrosine-protein kinase receptor Ret | Homo sapiens (Human) | EV |
O15146 | MUSK | Muscle, skeletal receptor tyrosine-protein kinase | Homo sapiens (Human) | EV |
Q01974 | ROR2 | Tyrosine-protein kinase transmembrane receptor ROR2 | Homo sapiens (Human) | EV |
Q16832 | DDR2 | Discoidin domain-containing receptor 2 | Homo sapiens (Human) | SS |
Q08345 | DDR1 | Epithelial discoidin domain-containing receptor 1 | Homo sapiens (Human) | EV |
Q16620 | NTRK2 | BDNF/NT-3 growth factors receptor | Homo sapiens (Human) | EV |
P04629 | NTRK1 | High affinity nerve growth factor receptor | Homo sapiens (Human) | EV |
Q16288 | NTRK3 | NT-3 growth factor receptor | Homo sapiens (Human) | SS |
P35916 | FLT4 | Vascular endothelial growth factor receptor 3 | Homo sapiens (Human) | SS |
P17948 | FLT1 | Vascular endothelial growth factor receptor 1 | Homo sapiens (Human) | SS |
P35968 | KDR | Vascular endothelial growth factor receptor 2 | Homo sapiens (Human) | EV |
P29317 | EPHA2 | Ephrin type-A receptor 2 | Homo sapiens (Human) | SS |
P21709 | EPHA1 | Ephrin type-A receptor 1 | Homo sapiens (Human) | SS |
P54760 | EPHB4 | Ephrin type-B receptor 4 | Homo sapiens (Human) | SS |
P29376 | LTK | Leukocyte tyrosine kinase receptor | Homo sapiens (Human) | SS |
Q9UM73 | ALK | ALK tyrosine kinase receptor | Homo sapiens (Human) | EV |
P08922 | ROS1 | Proto-oncogene tyrosine-protein kinase ROS | Homo sapiens (Human) | SS |
P14616 | INSRR | Insulin receptor-related protein | Homo sapiens (Human) | SS |
P08069 | IGF1R | Insulin-like growth factor 1 receptor | Homo sapiens (Human) | EV |
P06213 | INSR | Insulin receptor | Homo sapiens (Human) | EV |
P11362 | FGFR1 | Fibroblast growth factor receptor 1 | Homo sapiens (Human) | EV |
P21802 | FGFR2 | Fibroblast growth factor receptor 2 | Homo sapiens (Human) | EV |
P22455 | FGFR4 | Fibroblast growth factor receptor 4 | Homo sapiens (Human) | SS |
P22607 | FGFR3 | Fibroblast growth factor receptor 3 | Homo sapiens (Human) | EV |
Q12866 | MERTK | Tyrosine-protein kinase Mer | Homo sapiens (Human) | EV |
Q04912 | MST1R | Macrophage-stimulating protein receptor | Homo sapiens (Human) | EV |
P30530 | AXL | Tyrosine-protein kinase receptor UFO | Homo sapiens (Human) | PR |
Q06418 | TYRO3 | Tyrosine-protein kinase receptor TYRO3 | Homo sapiens (Human) | SS |
P08581 | MET | Hepatocyte growth factor receptor | Homo sapiens (Human) | EV |
P04626 | ERBB2 | Receptor tyrosine-protein kinase erbB-2 | Homo sapiens (Human) | SS |
Q15303 | ERBB4 | Receptor tyrosine-protein kinase erbB-4 | Homo sapiens (Human) | SS |
P21860 | ERBB3 | Receptor tyrosine-protein kinase erbB-3 | Homo sapiens (Human) | SS |
P00533 | EGFR | Epidermal growth factor receptor | Homo sapiens (Human) | EV |
P34925 | RYK | Tyrosine-protein kinase RYK | Homo sapiens (Human) | PR |
Q02763 | TEK | Angiopoietin-1 receptor | Homo sapiens (Human) | SS |
P35590 | TIE1 | Tyrosine-protein kinase receptor Tie-1 | Homo sapiens (Human) | PR |
P10721 | KIT | Mast/stem cell growth factor receptor Kit | Homo sapiens (Human) | EV |
P09619 | PDGFRB | Platelet-derived growth factor receptor beta | Homo sapiens (Human) | EV |
P07333 | CSF1R | Macrophage colony-stimulating factor 1 receptor | Homo sapiens (Human) | SS |
P16234 | PDGFRA | Platelet-derived growth factor receptor alpha | Homo sapiens (Human) | EV |
P36888 | FLT3 | Receptor-type tyrosine-protein kinase FLT3 | Homo sapiens (Human) | EV |
P15209 | Ntrk2 | BDNF/NT-3 growth factors receptor | Mus musculus (Mouse) | SS |
Q3UFB7 | Ntrk1 | High affinity nerve growth factor receptor | Mus musculus (Mouse) | SS |
Q61006 | Musk | Muscle, skeletal receptor tyrosine-protein kinase | Mus musculus (Mouse) | SS |
Q6VNS1 | Ntrk3 | NT-3 growth factor receptor | Mus musculus (Mouse) | SS |
Q9Z138 | Ror2 | Tyrosine-protein kinase transmembrane receptor ROR2 | Mus musculus (Mouse) | SS |
Q9Z139 | Ror1 | Inactive tyrosine-protein kinase transmembrane receptor ROR1 | Mus musculus (Mouse) | PR |
P24786 | NTRK3 | NT-3 growth factor receptor | Sus scrofa (Pig) | SS |
Q62838 | Musk | Muscle, skeletal receptor tyrosine protein kinase | Rattus norvegicus (Rat) | SS |
P35739 | Ntrk1 | High affinity nerve growth factor receptor | Rattus norvegicus (Rat) | SS |
Q03351 | Ntrk3 | NT-3 growth factor receptor | Rattus norvegicus (Rat) | SS |
Q63604 | Ntrk2 | BDNF/NT-3 growth factors receptor | Rattus norvegicus (Rat) | SS |
G5EGK5 | cam-1 | Tyrosine-protein kinase receptor cam-1 | Caenorhabditis elegans | SS |
O64770 | At1g61490 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61490 | Arabidopsis thaliana (Mouse-ear cress) | SS |
O64783 | At1g61370 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 | Arabidopsis thaliana (Mouse-ear cress) | SS |
O81833 | SD11 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
Q9FNE1 | CRK42 | Cysteine-rich receptor-like protein kinase 42 | Arabidopsis thaliana (Mouse-ear cress) | PR |
Q9LPZ9 | SD113 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 | Arabidopsis thaliana (Mouse-ear cress) | SS |
Q9SXB5 | At1g11303 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11303 | Arabidopsis thaliana (Mouse-ear cress) | PR |
Q9SYA0 | At1g61500 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61500 | Arabidopsis thaliana (Mouse-ear cress) | SS |
Q9SXB4 | At1g11300 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 | Arabidopsis thaliana (Mouse-ear cress) | PR |
O64778 | At1g61420 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420 | Arabidopsis thaliana (Mouse-ear cress) | SS |
O64776 | At1g61440 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61440 | Arabidopsis thaliana (Mouse-ear cress) | SS |
O64780 | At1g61400 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61400 | Arabidopsis thaliana (Mouse-ear cress) | SS |
Q9SY95 | At1g61550 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550 | Arabidopsis thaliana (Mouse-ear cress) | SS |
O64782 | SD129 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 | Arabidopsis thaliana (Mouse-ear cress) | SS |
O64774 | At1g61460 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61460 | Arabidopsis thaliana (Mouse-ear cress) | PR |
O64477 | At2g19130 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 | Arabidopsis thaliana (Mouse-ear cress) | SS |
O64793 | At1g67520 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 | Arabidopsis thaliana (Mouse-ear cress) | PR |
Q9SXB8 | At1g11330 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 | Arabidopsis thaliana (Mouse-ear cress) | PR |
O64784 | At1g61360 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 | Arabidopsis thaliana (Mouse-ear cress) | SS |
Q39203 | SD22 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 | Arabidopsis thaliana (Mouse-ear cress) | SS |
10 | 20 | 30 | 40 | 50 | 60 |
MHRPRRRGTR | PPLLALLAAL | LLAARGAAAQ | ETELSVSAEL | VPTSSWNISS | ELNKDSYLTL |
70 | 80 | 90 | 100 | 110 | 120 |
DEPMNNITTS | LGQTAELHCK | VSGNPPPTIR | WFKNDAPVVQ | EPRRLSFRST | IYGSRLRIRN |
130 | 140 | 150 | 160 | 170 | 180 |
LDTTDTGYFQ | CVATNGKEVV | SSTGVLFVKF | GPPPTASPGY | SDEYEEDGFC | QPYRGIACAR |
190 | 200 | 210 | 220 | 230 | 240 |
FIGNRTVYME | SLHMQGEIEN | QITAAFTMIG | TSSHLSDKCS | QFAIPSLCHY | AFPYCDETSS |
250 | 260 | 270 | 280 | 290 | 300 |
VPKPRDLCRD | ECEILENVLC | QTEYIFARSN | PMILMRLKLP | NCEDLPQPES | PEAANCIRIG |
310 | 320 | 330 | 340 | 350 | 360 |
IPMADPINKN | HKCYNSTGVD | YRGTVSVTKS | GRQCQPWNSQ | YPHTHTFTAL | RFPELNGGHS |
370 | 380 | 390 | 400 | 410 | 420 |
YCRNPGNQKE | APWCFTLDEN | FKSDLCDIPA | CDSKDSKEKN | KMEILYILVP | SVAIPLAIAL |
430 | 440 | 450 | 460 | 470 | 480 |
LFFFICVCRN | NQKSSSAPVQ | RQPKHVRGQN | VEMSMLNAYK | PKSKAKELPL | SAVRFMEELG |
490 | 500 | 510 | 520 | 530 | 540 |
ECAFGKIYKG | HLYLPGMDHA | QLVAIKTLKD | YNNPQQWTEF | QQEASLMAEL | HHPNIVCLLG |
550 | 560 | 570 | 580 | 590 | 600 |
AVTQEQPVCM | LFEYINQGDL | HEFLIMRSPH | SDVGCSSDED | GTVKSSLDHG | DFLHIAIQIA |
610 | 620 | 630 | 640 | 650 | 660 |
AGMEYLSSHF | FVHKDLAARN | ILIGEQLHVK | ISDLGLSREI | YSADYYRVQS | KSLLPIRWMP |
670 | 680 | 690 | 700 | 710 | 720 |
PEAIMYGKFS | SDSDIWSFGV | VLWEIFSFGL | QPYYGFSNQE | VIEMVRKRQL | LPCSEDCPPR |
730 | 740 | 750 | 760 | 770 | 780 |
MYSLMTECWN | EIPSRRPRFK | DIHVRLRSWE | GLSSHTSSTT | PSGGNATTQT | TSLSASPVSN |
790 | 800 | 810 | 820 | 830 | 840 |
LSNPRYPNYM | FPSQGITPQG | QIAGFIGPPI | PQNQRFIPIN | GYPIPPGYAA | FPAAHYQPTG |
850 | 860 | 870 | 880 | 890 | 900 |
PPRVIQHCPP | PKSRSPSSAS | GSTSTGHVTS | LPSSGSNQEA | NIPLLPHMSI | PNHPGGMGIT |
910 | 920 | 930 | |||
VFGNKSQKPY | KIDSKQASLL | GDANIHGHTE | SMISAEL |