P78357
Gene name |
CNTNAP1 (CASPR, NRXN4) |
Protein name |
Contactin-associated protein 1 |
Names |
Caspr, Caspr1, Neurexin IV, Neurexin-4, p190 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:8506 |
EC number |
|
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

1 structures for P78357
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
AF-P78357-F1 | Predicted | AlphaFoldDB |
1031 variants for P78357
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
rs1597802927 RCV000855460 CA399632041 |
23 | Y>* | Fetal akinesia deformation sequence 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
VAR_081766 | 50 | P>Q | CHN3 [UniProt] | Yes | UniProt |
RCV000722094 CA399634095 rs1567969825 VAR_081767 |
212 | L>P | Neuropathy, congenital hypomyelinating, 3 CHN3 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
rs768554986 RCV000722097 VAR_078818 CA8581660 |
323 | C>R | Neuropathy, congenital hypomyelinating, 3 LCCS7 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
VAR_078819 CA8581722 RCV002529770 rs779027563 RCV000722099 RCV000626014 |
388 | R>P | Lethal congenital contracture syndrome 7 Neuropathy, congenital hypomyelinating, 3 Inborn genetic diseases CHN3 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
RCV001008751 RCV000496980 rs1555642784 |
521 | L>missing | Lethal congenital contracture syndrome 7 [ClinVar] | Yes |
ClinVar dbSNP |
RCV000722100 rs756896276 CA399641001 |
559 | W>* | Neuropathy, congenital hypomyelinating, 3 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
VAR_081768 | 559 | W>del | CHN3 [UniProt] | Yes | UniProt |
VAR_081769 | 621 | R>del | CHN3 [UniProt] | Yes | UniProt |
RCV000722098 COSM79154 CA290794827 rs878853221 |
623 | W>* | ovary Variant assessed as Somatic; impact. Neuropathy, congenital hypomyelinating, 3 [Cosmic, NCI-TCGA, ClinVar] | Yes |
ClinGen cosmic curated ClinVar Ensembl NCI-TCGA dbSNP |
VAR_078820 | 623 | W>del | LCCS7 and CHN3 [UniProt] | Yes | UniProt |
rs1597807901 RCV000855461 CA399642944 |
636 | V>M | Fetal akinesia deformation sequence 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA399643353 RCV000722095 rs1567973088 |
671 | Q>* | Neuropathy, congenital hypomyelinating, 3 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
VAR_078821 | 671 | Q>del | CHN3 [UniProt] | Yes | UniProt |
CA399643369 RCV001030776 rs1567973091 RCV000679953 |
672 | W>* | Arthrogryposis, distal, type 1A Neuropathy, congenital hypomyelinating, 3 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
VAR_078822 | 672 | W>del | LCCS7 [UniProt] | Yes | UniProt |
VAR_081770 | 714 | R>P | CHN3 [UniProt] | Yes | UniProt |
rs761805324 VAR_078823 RCV001862113 RCV000722096 CA8582012 |
764 | R>C | Neuropathy, congenital hypomyelinating, 3 CHN3 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
VAR_081771 | 782 | R>del | CHN3 [UniProt] | Yes | UniProt |
rs746361190 CA8582053 RCV000256459 |
815 | T>N | Lethal congenital contracture syndrome 7 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA8582112 rs144659252 RCV000853286 |
890 | R>* | Lethal congenital contracture syndrome 7 Variant assessed as Somatic; 0.0 impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
VAR_081772 | 896 | W>del | CHN3 [UniProt] | Yes | UniProt |
rs369859767 CA8582131 RCV000959413 RCV002547269 |
916 | Y>C | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001813766 rs751050956 RCV000186508 RCV000492827 |
968 | C>missing | Lethal congenital contracture syndrome 7 Neuropathy, congenital hypomyelinating, 3 [ClinVar] | Yes |
ClinVar dbSNP |
rs758431189 RCV001333148 CA8582193 |
977 | R>H | Lethal congenital contracture syndrome 7 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs786204799 RCV000169694 |
1004 | E>* | Lethal congenital contracture syndrome 7 [ClinVar] | Yes |
ClinVar dbSNP |
RCV000624422 CA8582285 rs150167601 RCV001360041 |
1114 | D>G | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs2053168326 RCV001334155 |
1221 | L>missing | Lethal congenital contracture syndrome 7 [ClinVar] | Yes |
ClinVar dbSNP |
rs1160381531 CA399631837 |
3 | H>Q | No |
ClinGen TOPMed |
|
CA8581389 rs751792020 |
3 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs911583692 CA290789202 |
4 | L>F | No |
ClinGen TOPMed gnomAD |
|
CA8581390 rs757487161 |
5 | R>W | No |
ClinGen ExAC gnomAD |
|
CA8581391 rs144595361 |
6 | L>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1480650183 CA399631864 |
7 | F>L | No |
ClinGen gnomAD |
|
rs1176129288 CA399631874 |
7 | F>L | No |
ClinGen gnomAD |
|
CA399631912 rs1384344844 |
12 | A>S | No |
ClinGen gnomAD |
|
rs1435088226 CA399631919 |
13 | A>S | No |
ClinGen TOPMed |
|
rs1435088226 CA399631922 |
13 | A>T | No |
ClinGen TOPMed |
|
CA399631927 rs1265507214 |
13 | A>V | No |
ClinGen TOPMed |
|
CA290789223 rs900215315 |
14 | V>I | No |
ClinGen TOPMed |
|
rs537059106 CA290789234 |
17 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs768968366 CA8581396 |
17 | A>T | No |
ClinGen ExAC gnomAD |
|
rs537059106 CA8581397 |
17 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA290789253 rs747808560 |
18 | E>* | No |
ClinGen ExAC gnomAD |
|
CA8581399 rs771686167 |
18 | E>D | No |
ClinGen ExAC gnomAD |
|
COSM94086 rs747808560 CA8581398 |
18 | E>K | breast [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA399631993 rs1226995125 |
20 | W>C | No |
ClinGen gnomAD |
|
CA8581400 rs772813642 |
20 | W>G | No |
ClinGen ExAC gnomAD |
|
CA399632011 rs1203448010 |
22 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA399632006 rs1307728562 |
22 | Y>H | No |
ClinGen gnomAD |
|
rs746594808 CA8581421 |
24 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399632047 rs1346131068 |
25 | C>S | No |
ClinGen gnomAD |
|
CA399632055 rs1399802501 |
26 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA399632056 rs1399802501 |
26 | D>Y | No |
ClinGen gnomAD |
|
CA399632077 rs907646222 CA290789704 |
28 | E>D | No |
ClinGen TOPMed |
|
rs776187677 CA399632083 |
30 | V>L | No |
ClinGen ExAC gnomAD |
|
CA8581423 rs776187677 |
30 | V>M | No |
ClinGen ExAC gnomAD |
|
CA8581424 rs759439280 COSM1679839 |
31 | G>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA399632121 rs1342318096 |
36 | R>H | No |
ClinGen gnomAD |
|
CA399632132 rs1370685194 |
38 | L>P | No |
ClinGen TOPMed |
|
rs1297151855 CA399632152 |
41 | S>F | No |
ClinGen TOPMed |
|
rs190912496 CA8581425 |
42 | S>C | No |
ClinGen 1000Genomes ExAC |
|
CA290789751 rs190912496 |
42 | S>Y | No |
ClinGen 1000Genomes ExAC |
|
rs534684947 CA8581426 |
46 | L>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA399632188 rs1214184635 |
47 | L>F | No |
ClinGen gnomAD |
|
CA8581427 rs762862595 |
48 | T>S | No |
ClinGen ExAC gnomAD |
|
CA290789760 rs940413470 |
49 | A>E | No |
ClinGen TOPMed gnomAD |
|
rs1200500953 CA399632206 |
50 | P>R | No |
ClinGen gnomAD |
|
rs2271029 CA399632208 |
51 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA290789761 rs200318623 |
51 | R>I | No |
ClinGen gnomAD |
|
rs750743028 CA8581429 |
54 | R>G | No |
ClinGen ExAC gnomAD |
|
rs760965654 CA8581430 |
56 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 57 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs780917967 CA8581459 |
58 | I>V | No |
ClinGen ExAC gnomAD |
|
CA399632300 rs1258763618 |
61 | W>* | No |
ClinGen gnomAD |
|
CA8581461 rs745452887 |
62 | S>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
TCGA novel | 65 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA399632365 rs1245544734 |
68 | P>L | No |
ClinGen gnomAD |
|
CA399632360 rs1203824356 |
68 | P>S | No |
ClinGen TOPMed |
|
rs1424694327 CA399632422 |
73 | Q>H | No |
ClinGen gnomAD |
|
CA8581463 rs144497813 |
77 | M>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
CA399632503 rs1367145833 |
80 | H>Q | No |
ClinGen gnomAD |
|
TCGA novel | 80 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 81 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8581466 rs768684553 |
82 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581465 rs768684553 |
82 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA290789863 rs530020899 |
83 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA399632526 rs1398891828 |
83 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs771709079 CA8581468 |
85 | V>M | No |
ClinGen ExAC gnomAD |
|
rs1395176846 CA399632555 |
86 | A>V | No |
ClinGen gnomAD |
|
rs776920122 CA8581469 |
89 | G>D | No |
ClinGen ExAC gnomAD |
|
CA8581470 rs759670106 |
90 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581471 rs765414012 |
91 | F>C | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 92 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8581472 rs775520960 |
97 | V>F | No |
ClinGen ExAC gnomAD |
|
CA8581473 rs775520960 |
97 | V>L | No |
ClinGen ExAC gnomAD |
|
rs1265482613 CA399632664 |
99 | R>H | No |
ClinGen gnomAD |
|
CA399632672 rs1483858593 |
100 | Y>F | No |
ClinGen gnomAD |
|
rs1254471031 CA399632685 |
102 | L>V | No |
ClinGen gnomAD |
|
CA290789888 rs1019694046 |
104 | Y>C | No |
ClinGen Ensembl |
|
CA8581477 rs767706478 |
105 | G>C | No |
ClinGen ExAC gnomAD |
|
CA399632707 rs767706478 |
105 | G>S | No |
ClinGen ExAC gnomAD |
|
rs1597803258 CA399632740 |
108 | V>G | No |
ClinGen Ensembl |
|
rs1177981180 CA399632758 |
110 | S>C | No |
ClinGen gnomAD |
|
CA399632765 rs1297637562 |
110 | S>R | No |
ClinGen TOPMed |
|
CA8581480 rs779751302 |
113 | P>Q | No |
ClinGen ExAC gnomAD |
|
CA8581481 rs748839835 |
115 | Y>H | No |
ClinGen ExAC gnomAD |
|
CA399632837 rs1380320887 |
117 | R>Q | No |
ClinGen TOPMed |
|
rs754492275 CA8581482 |
118 | G>E | No |
ClinGen ExAC gnomAD |
|
rs779011841 CA8581483 |
119 | H>R | No |
ClinGen ExAC gnomAD |
|
rs375684503 CA290789906 |
121 | S>L | No |
ClinGen ESP TOPMed |
|
rs1188966406 CA399633464 |
124 | F>S | No |
ClinGen gnomAD |
|
rs1252123409 CA399633468 |
125 | G>S | No |
ClinGen gnomAD |
|
CA399633480 rs1440234545 COSM1683100 |
126 | N>K | kidney [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA399633484 rs1298303462 COSM3691582 |
127 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
CA399633496 rs777661253 |
129 | E>* | No |
ClinGen ExAC gnomAD |
|
rs35789615 CA290790200 |
129 | E>D | No |
ClinGen gnomAD |
|
CA8581504 rs777661253 COSM1201691 |
129 | E>K | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA399633497 rs777661253 |
129 | E>Q | No |
ClinGen ExAC gnomAD |
|
rs746807793 CA8581505 |
130 | S>* | No |
ClinGen ExAC |
|
rs780266386 CA8581507 |
131 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs562221422 CA8581506 |
131 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs780266386 CA399633510 |
131 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1597803731 CA399633516 |
132 | V>G | No |
ClinGen Ensembl |
|
rs1291842015 CA399633513 |
132 | V>M | No |
ClinGen gnomAD |
|
rs1597803743 CA399633522 |
133 | V>G | No |
ClinGen Ensembl |
|
CA290790234 rs533198017 |
134 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA399633524 rs1309204428 |
134 | R>H | Variant assessed as Somatic; 5.156e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA8581508 rs533198017 |
134 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1290075200 CA399633539 |
136 | D>A | No |
ClinGen gnomAD |
|
rs762423623 CA8581511 |
136 | D>E | No |
ClinGen ExAC gnomAD |
|
rs1290075200 CA399633537 |
136 | D>G | No |
ClinGen gnomAD |
|
CA8581510 rs774273492 |
136 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs774273492 CA399633536 |
136 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581512 rs772489018 |
137 | L>V | No |
ClinGen ExAC gnomAD |
|
rs1457860702 CA399633545 |
138 | H>N | No |
ClinGen gnomAD |
|
rs1597803781 CA399633550 |
138 | H>P | No |
ClinGen Ensembl |
|
CA8581514 rs760963094 |
138 | H>Q | No |
ClinGen ExAC gnomAD |
|
rs766786493 CA8581515 |
139 | F>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399633553 rs1236316996 |
139 | F>L | No |
ClinGen gnomAD |
|
CA290790257 rs766786493 |
139 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs766786493 CA399633555 |
139 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs897760189 CA399633564 |
140 | H>Q | No |
ClinGen gnomAD |
|
rs1412868280 CA399633561 |
140 | H>R | No |
ClinGen gnomAD |
|
rs753616521 CA8581516 |
140 | H>Y | No |
ClinGen ExAC gnomAD |
|
rs1162994444 CA399633571 |
141 | F>L | No |
ClinGen gnomAD |
|
TCGA novel | 141 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA290790268 rs147205771 |
143 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA399633579 rs1408964313 |
143 | A>T | No |
ClinGen TOPMed |
|
COSM1383418 CA8581517 rs147205771 |
143 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
rs1331190812 CA399633588 |
144 | R>L | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 147 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1285153375 CA399633611 |
148 | I>F | No |
ClinGen TOPMed gnomAD |
|
rs1285153375 CA399633612 |
148 | I>V | No |
ClinGen TOPMed gnomAD |
|
CA8581519 rs752115279 |
149 | V>L | No |
ClinGen ExAC gnomAD |
|
CA399633617 rs752115279 |
149 | V>M | No |
ClinGen ExAC gnomAD |
|
rs1015872910 CA290790274 |
150 | P>S | No |
ClinGen TOPMed |
|
CA8581520 rs757882183 |
151 | L>R | No |
ClinGen ExAC gnomAD |
|
CA399633631 rs1317948022 |
152 | A>T | No |
ClinGen gnomAD |
|
CA399633636 rs1197462882 |
152 | A>V | No |
ClinGen gnomAD |
|
rs745943872 CA290790276 |
153 | W>* | No |
ClinGen Ensembl |
|
CA8581521 rs777593216 |
155 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 156 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs938630556 CA399633670 |
158 | K>E | No |
ClinGen gnomAD |
|
CA399633675 rs1210813489 |
158 | K>N | No |
ClinGen gnomAD |
|
CA290790289 rs938630556 |
158 | K>Q | No |
ClinGen gnomAD |
|
CA290790292 rs757050594 |
163 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs757050594 CA8581523 |
163 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399633706 rs1224977819 |
164 | G>S | No |
ClinGen TOPMed |
|
CA399633729 rs1421664300 |
167 | G>D | No |
ClinGen gnomAD |
|
CA8581528 rs551276110 |
168 | C>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1358895876 CA399633743 |
169 | P>L | No |
ClinGen gnomAD |
|
CA290790306 rs972299600 |
169 | P>S | No |
ClinGen TOPMed |
|
CA8581530 rs760660292 |
171 | K>T | No |
ClinGen ExAC |
|
rs566767746 CA8581552 |
172 | A>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8581553 rs566767746 |
172 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs770136038 CA8581554 |
173 | D>E | No |
ClinGen ExAC gnomAD |
|
rs775008173 CA8581555 |
174 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 174 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA399633786 rs1181097352 |
174 | I>T | No |
ClinGen gnomAD |
|
rs948775492 CA290790407 |
175 | L>H | No |
ClinGen TOPMed |
|
rs762662790 CA8581556 |
175 | L>V | No |
ClinGen ExAC gnomAD |
|
CA290790440 COSM706286 rs1028565981 |
179 | G>S | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs1223577124 CA399633822 |
180 | D>N | No |
ClinGen TOPMed |
|
CA399633851 rs1328895115 |
184 | S>T | No |
ClinGen gnomAD |
|
rs1448878479 CA399633861 |
185 | Y>C | No |
ClinGen gnomAD |
|
TCGA novel | 186 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1281226815 CA399633868 |
186 | R>H | No |
ClinGen TOPMed |
|
CA8581560 rs767466032 |
188 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA399633888 rs1358716939 |
189 | R>L | No |
ClinGen TOPMed gnomAD |
|
CA399633886 rs1358716939 |
189 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA399633899 rs1597804040 |
191 | V>G | No |
ClinGen Ensembl |
|
CA8581563 rs766195304 |
191 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 193 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1388157342 CA399633912 |
193 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA399633941 rs1239325817 |
197 | D>E | No |
ClinGen gnomAD |
|
rs1177146653 CA399633946 |
198 | V>E | No |
ClinGen gnomAD |
|
CA399633945 rs1439410296 |
198 | V>L | No |
ClinGen gnomAD |
|
rs777750878 CA8581567 |
199 | F>I | No |
ClinGen ExAC gnomAD |
|
rs561659603 CA8581569 |
199 | F>L | No |
ClinGen ExAC gnomAD |
|
CA8581571 rs746309332 |
210 | G>S | No |
ClinGen ExAC gnomAD |
|
rs1052794932 CA290790550 |
211 | L>V | No |
ClinGen TOPMed |
|
CA8581574 COSM1248645 rs748941568 |
214 | H>N | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs768387220 CA8581576 |
214 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA290790563 rs892358714 |
215 | A>S | No |
ClinGen TOPMed gnomAD |
|
rs1283843197 COSM460327 CA399634121 |
216 | E>K | cervix Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs1332713267 CA399634160 |
219 | Q>H | No |
ClinGen gnomAD |
|
rs761328167 CA8581577 |
221 | D>N | No |
ClinGen ExAC gnomAD |
|
rs371406732 CA290790571 |
223 | V>L | No |
ClinGen ESP TOPMed gnomAD |
|
CA290790573 rs371406732 |
223 | V>M | No |
ClinGen ESP TOPMed gnomAD |
|
rs760650248 CA8581580 |
226 | E>A | No |
ClinGen ExAC gnomAD |
|
rs547038534 CA8581581 |
229 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
TCGA novel | 240 | S>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 241 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8581609 rs756098225 |
241 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399634647 rs1192417814 |
243 | I>V | No |
ClinGen gnomAD |
|
rs865820745 CA290790943 |
245 | P>S | No |
ClinGen gnomAD |
|
rs754233759 CA8581611 |
247 | P>T | No |
ClinGen ExAC gnomAD |
|
CA399634764 rs1420116161 |
248 | G>D | No |
ClinGen gnomAD |
|
rs755403805 CA8581612 |
250 | T>I | No |
ClinGen ExAC gnomAD |
|
CA399634801 rs755403805 |
250 | T>S | No |
ClinGen ExAC gnomAD |
|
CA399634858 rs1366920571 |
253 | S>C | No |
ClinGen TOPMed |
|
rs1318052346 CA399634871 |
253 | S>R | No |
ClinGen TOPMed |
|
CA290790963 rs1049892466 |
254 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA399634907 rs1177927699 |
255 | G>S | No |
ClinGen TOPMed |
|
CA8581616 rs545191038 |
258 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8581617 rs746547089 |
259 | N>D | No |
ClinGen ExAC gnomAD |
|
CA8581618 rs770286337 |
259 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581619 rs776632940 |
261 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA8581620 rs373476917 |
262 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs769767609 CA8581621 |
265 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA399635160 rs1265494349 |
266 | V>A | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 266 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA290790990 rs373203275 |
266 | V>M | No |
ClinGen gnomAD |
|
CA8581623 rs762165875 |
267 | R>W | No |
ClinGen ExAC gnomAD |
|
rs1188116244 CA399635205 |
269 | D>E | No |
ClinGen TOPMed |
|
TCGA novel | 270 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8581624 rs767875480 |
270 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA8581625 rs773250909 |
272 | G>S | No |
ClinGen ExAC gnomAD |
|
rs1461856215 CA399635250 |
273 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
TCGA novel | 275 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs760814838 CA8581626 |
275 | V>I | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 276 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA399635327 rs1442413701 |
277 | F>L | No |
ClinGen TOPMed |
|
rs1597804663 CA399635324 |
277 | F>S | No |
ClinGen Ensembl |
|
rs377261961 CA290791041 |
278 | T>I | No |
ClinGen Ensembl |
|
CA399635347 rs1567970220 |
279 | L>V | No |
ClinGen Ensembl |
|
rs922624124 CA290791045 |
280 | D>E | No |
ClinGen TOPMed gnomAD |
|
CA399635383 rs1340417620 |
281 | G>R | No |
ClinGen TOPMed |
|
rs1294987054 CA399635391 |
281 | G>V | No |
ClinGen TOPMed |
|
CA290791048 rs560060977 |
282 | Y>C | No |
ClinGen 1000Genomes TOPMed |
|
CA8581628 rs754429609 |
284 | Q>* | No |
ClinGen ExAC gnomAD |
|
CA8581629 rs527466366 |
284 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1448255142 CA399635483 |
285 | R>H | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA8581631 rs753095573 |
289 | N>S | No |
ClinGen ExAC gnomAD |
|
CA290791067 rs1051701748 |
290 | G>A | No |
ClinGen TOPMed gnomAD |
|
CA8581632 rs758709669 |
292 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399635656 rs1230939534 |
293 | E>Q | No |
ClinGen gnomAD |
|
rs1423800236 CA399635669 |
294 | R>W | No |
ClinGen gnomAD |
|
CA290791084 rs910448156 |
296 | N>K | No |
ClinGen TOPMed |
|
rs139692372 CA399635768 |
297 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs139692372 CA8581633 |
297 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8581634 rs74967402 |
299 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA399636955 rs765759640 |
303 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 303 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1315392585 CA399637002 |
306 | L>P | No |
ClinGen gnomAD |
|
CA8581651 rs758762996 |
307 | V>A | No |
ClinGen ExAC gnomAD |
|
rs751281750 CA8581653 |
310 | A>E | No |
ClinGen ExAC gnomAD |
|
CA8581654 rs751281750 |
310 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
COSM3819658 CA8581655 rs780793360 |
311 | R>W | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA399637081 rs1597805432 |
313 | N>T | No |
ClinGen Ensembl |
|
CA8581656 rs745401594 |
317 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1340550337 CA399637175 |
320 | F>S | No |
ClinGen gnomAD |
|
COSM1521504 CA8581658 rs780146066 |
321 | R>H | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA399637194 rs780146066 |
321 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399637203 rs1219808261 |
322 | G>D | No |
ClinGen gnomAD |
|
CA399637200 rs1029584700 |
322 | G>R | No |
ClinGen gnomAD |
|
rs1029584700 CA290792659 |
322 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs1351769649 CA399637216 |
323 | C>Y | No |
ClinGen TOPMed |
|
rs773997395 CA399637222 |
324 | I>L | No |
ClinGen ExAC gnomAD |
|
CA8581662 rs747297931 |
324 | I>T | No |
ClinGen ExAC gnomAD |
|
rs773997395 CA8581661 |
324 | I>V | No |
ClinGen ExAC gnomAD |
|
rs771093781 CA399637230 |
325 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581663 rs771093781 |
325 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1192548186 CA399637245 |
327 | V>E | No |
ClinGen gnomAD |
|
CA290792671 rs955448292 |
331 | R>G | No |
ClinGen Ensembl |
|
CA8581665 rs759621490 |
331 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399637282 rs1192331111 |
332 | V>F | No |
ClinGen TOPMed gnomAD |
|
rs1192331111 CA399637280 |
332 | V>L | No |
ClinGen TOPMed gnomAD |
|
rs769795430 CA8581666 |
333 | N>S | No |
ClinGen ExAC gnomAD |
|
rs776040139 CA8581667 |
335 | A>T | No |
ClinGen ExAC |
|
rs866425883 CA290792685 |
338 | A>V | No |
ClinGen Ensembl |
|
rs763434256 CA8581668 |
339 | V>M | No |
ClinGen ExAC gnomAD |
|
rs1399812566 CA399637358 |
340 | R>P | No |
ClinGen gnomAD |
|
CA290792702 rs962698963 |
340 | R>W | Variant assessed as Somatic; 4.623e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs764567288 CA8581669 |
341 | R>C | No |
ClinGen ExAC gnomAD |
|
rs762196959 CA8581671 |
343 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs566950806 CA8581673 |
344 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs755752393 CA8581674 |
346 | T>I | No |
ClinGen ExAC gnomAD |
|
CA290792710 TCGA novel rs779699947 |
347 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen ExAC gnomAD |
CA399637545 rs1209086841 |
351 | V>A | No |
ClinGen TOPMed |
|
CA399637579 COSM1383421 rs1342471394 |
354 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
rs758354832 CA290793005 |
356 | L>V | No |
ClinGen TOPMed gnomAD |
|
rs1332830712 CA399637609 |
357 | D>A | No |
ClinGen TOPMed gnomAD |
|
rs1597805971 CA399637637 |
359 | V>G | No |
ClinGen Ensembl |
|
TCGA novel | 359 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs748674756 CA8581707 |
360 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581706 rs748674756 |
360 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs145754857 CA8581708 |
361 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs367731422 CA8581709 |
362 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs2053035860 RCV001090848 |
363 | I>V | No |
ClinVar dbSNP |
|
rs1314567822 CA399637702 |
365 | F>L | No |
ClinGen TOPMed |
|
rs371717693 CA8581711 |
368 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8581712 rs758968614 |
369 | H>Y | No |
ClinGen ExAC gnomAD |
|
CA8581713 rs764803147 |
370 | N>D | No |
ClinGen ExAC gnomAD |
|
rs1025289657 CA290793037 |
371 | F>L | No |
ClinGen Ensembl |
|
rs879724262 CA290793039 |
372 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
rs886762756 CA290793045 |
373 | Q>R | No |
ClinGen Ensembl |
|
rs975592102 CA290793051 |
378 | P>T | No |
ClinGen TOPMed |
|
rs375309204 CA8581715 |
379 | R>H | Variant assessed as Somatic; 0.0005544 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA399637825 rs1193724286 |
379 | R>S | No |
ClinGen gnomAD |
|
COSM94087 CA8581716 rs763919892 |
380 | R>H | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA8581719 rs780268591 |
385 | V>L | No |
ClinGen ExAC gnomAD |
|
rs755070825 CA290793075 |
388 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs755070825 CA8581721 |
388 | R>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
TCGA novel | 390 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1239713897 CA399637989 |
393 | D>G | No |
ClinGen TOPMed |
|
CA399637985 rs1209653208 |
393 | D>Y | No |
ClinGen gnomAD |
|
rs1597806044 CA399637999 |
394 | L>F | No |
ClinGen Ensembl |
|
rs1205189131 CA399638026 |
396 | G>A | No |
ClinGen gnomAD |
|
CA399638038 rs1426630572 |
398 | L>F | No |
ClinGen TOPMed gnomAD |
|
CA399638039 rs1426630572 COSM94088 |
398 | L>V | breast [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
CA290793086 rs866867433 |
401 | S>T | No |
ClinGen Ensembl |
|
CA399638081 COSM319548 rs372495374 |
402 | R>C | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
rs372495374 CA8581729 |
402 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA399638086 rs1453580235 |
402 | R>L | No |
ClinGen gnomAD |
|
CA399638087 rs1213475000 |
403 | L>V | No |
ClinGen TOPMed |
|
rs1373856191 CA399638101 |
404 | G>A | No |
ClinGen gnomAD |
|
rs958251710 CA290793096 |
405 | D>E | No |
ClinGen Ensembl |
|
CA399638118 rs1295028420 CA399638116 |
406 | G>R | No |
ClinGen TOPMed |
|
rs1384415458 CA399638133 |
408 | G>R | No |
ClinGen gnomAD |
|
rs775036363 COSM1383422 CA8581732 |
410 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA8581734 rs762411932 |
414 | L>I | No |
ClinGen ExAC gnomAD |
|
CA399638258 rs1241364565 |
416 | E>D | No |
ClinGen TOPMed gnomAD |
|
CA290793125 rs988372472 |
416 | E>K | No |
ClinGen TOPMed |
|
rs757050651 CA8581737 |
418 | Q>* | No |
ClinGen ExAC gnomAD |
|
CA399638328 rs1355399251 |
421 | V>M | No |
ClinGen gnomAD |
|
rs767286162 CA8581738 |
422 | S>F | No |
ClinGen ExAC gnomAD |
|
CA399638381 rs1259605373 |
423 | I>T | No |
ClinGen gnomAD |
|
TCGA novel | 424 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA290793144 rs754056108 |
427 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581739 rs754056108 |
427 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581740 rs754056108 |
427 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA16607242 RCV000428036 rs778961637 |
428 | R>* | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs868749538 COSM979581 CA290793154 |
428 | R>Q | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
CA399638514 rs1253563877 |
432 | Q>K | No |
ClinGen gnomAD |
|
CA8581742 rs748280197 |
432 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA290793164 rs370338317 |
434 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
CA399638602 rs1421087465 |
436 | G>R | No |
ClinGen gnomAD |
|
CA399638716 rs1397460793 |
437 | Y>C | No |
ClinGen gnomAD |
|
CA399638714 rs1370721322 |
437 | Y>D | No |
ClinGen gnomAD |
|
COSM1383423 rs781513422 CA8581766 |
438 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA399638723 rs746268826 |
438 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581767 rs746268826 |
438 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1476117309 CA399638728 |
439 | L>M | No |
ClinGen TOPMed |
|
CA399638794 rs1243893038 |
442 | G>S | No |
ClinGen Ensembl |
|
TCGA novel | 443 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1203537396 COSM1750055 CA399638850 |
446 | E>K | urinary_tract [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA399638872 rs1597806451 |
447 | V>G | No |
ClinGen Ensembl |
|
rs1017635206 CA290793389 |
448 | N>H | No |
ClinGen Ensembl |
|
CA399638889 rs1249467076 |
449 | F>C | No |
ClinGen gnomAD |
|
rs200047984 CA290793393 |
451 | A>E | No |
ClinGen Ensembl |
|
CA399638923 rs1217173581 |
452 | Q>* | No |
ClinGen gnomAD |
|
CA399638931 rs1479761540 |
452 | Q>H | No |
ClinGen gnomAD |
|
CA399638934 rs1190390855 |
453 | E>K | No |
ClinGen gnomAD |
|
rs769642792 CA290793395 |
454 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs769642792 CA8581770 |
454 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399638963 rs1438676184 |
455 | H>N | No |
ClinGen TOPMed |
|
rs1474938542 CA399638974 |
456 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA8581771 rs768204081 |
457 | V>I | No |
ClinGen ExAC gnomAD |
|
CA8581772 rs773818742 |
458 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 459 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8581773 rs761271132 |
462 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581776 rs772962703 |
468 | V>I | No |
ClinGen ExAC gnomAD |
|
CA399639083 rs1293134049 |
469 | R>T | No |
ClinGen TOPMed |
|
rs760521187 CA8581777 |
471 | S>L | No |
ClinGen ExAC gnomAD |
|
rs146616808 CA8581778 |
473 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8581780 rs763174357 |
473 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs146616808 CA8581779 |
473 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8581781 rs764313512 |
477 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs141390466 CA290793410 COSM979582 |
477 | R>W | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP NCI-TCGA TOPMed |
rs751722877 CA8581782 |
479 | G>V | No |
ClinGen ExAC gnomAD |
|
rs757238217 CA8581783 |
480 | T>A | No |
ClinGen ExAC gnomAD |
|
COSM243764 CA399639206 rs1213239725 |
481 | S>P | prostate [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA399639240 rs1281313776 |
483 | F>L | No |
ClinGen gnomAD |
|
CA399639250 rs1392191065 |
484 | F>S | No |
ClinGen TOPMed |
|
TCGA novel | 486 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1159964348 CA399639616 |
488 | P>L | No |
ClinGen gnomAD |
|
CA399639638 rs1597806684 |
490 | P>L | No |
ClinGen Ensembl |
|
rs994762482 CA290793629 |
493 | R>* | No |
ClinGen TOPMed gnomAD |
|
CA8581807 rs145175049 |
493 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8581806 rs145175049 |
493 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs755276777 CA8581808 |
495 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs970939396 CA290793647 |
497 | H>Y | No |
ClinGen TOPMed gnomAD |
|
CA8581809 rs200093295 |
500 | Q>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs148181656 CA290793661 |
501 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
CA8581811 rs373250430 |
503 | F>L | No |
ClinGen ESP ExAC gnomAD |
|
CA8581812 rs777121666 |
505 | G>S | No |
ClinGen ExAC gnomAD |
|
CA399639837 CA399639841 rs1337550919 |
507 | M>I | No |
ClinGen TOPMed gnomAD |
|
rs926724591 CA290793671 |
510 | L>F | No |
ClinGen TOPMed gnomAD |
|
rs926724591 CA399639868 |
510 | L>V | No |
ClinGen TOPMed gnomAD |
|
rs1567972134 CA399639882 |
511 | K>E | No |
ClinGen Ensembl |
|
CA399639967 rs1183452114 |
515 | Q>E | No |
ClinGen gnomAD |
|
CA399639987 rs141155776 |
515 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8581816 rs745674741 |
517 | V>A | No |
ClinGen ExAC gnomAD |
|
rs1419451378 CA399640053 |
519 | L>V | No |
ClinGen gnomAD |
|
CA290793704 rs536861096 |
521 | L>P | No |
ClinGen 1000Genomes gnomAD |
|
CA8581817 rs376238535 |
521 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
VAR_050267 CA8581818 rs35437096 |
522 | V>L | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs761928090 CA8581819 |
523 | E>A | No |
ClinGen ExAC gnomAD |
|
rs1567972168 CA399640127 |
523 | E>K | No |
ClinGen Ensembl |
|
CA399640159 rs370604328 |
525 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8581821 rs773195711 |
525 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs370604328 CA8581820 |
525 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
RCV000898472 CA8581823 rs137982413 |
526 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA399640170 rs760759398 |
526 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399640230 rs1234396329 |
530 | Y>C | No |
ClinGen gnomAD |
|
rs1273116283 CA399640300 |
534 | L>I | No |
ClinGen gnomAD |
|
rs754273796 CA8581824 |
537 | T>I | No |
ClinGen ExAC gnomAD |
|
CA290793715 rs765569295 |
539 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM979583 rs755399682 CA8581825 |
539 | G>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA8581826 rs765569295 |
539 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399640598 rs1397106232 |
544 | C>* | No |
ClinGen gnomAD |
|
rs1223521520 CA399640725 |
548 | M>R | No |
ClinGen TOPMed gnomAD |
|
rs1262146130 | 548 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8581844 rs143557763 |
548 | M>V | No |
ClinGen ESP ExAC TOPMed |
|
rs1232601213 CA399640833 |
552 | D>G | No |
ClinGen TOPMed |
|
rs377444768 CA8581846 |
554 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs377444768 CA399640868 |
554 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA399640872 rs1400184247 |
554 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA8581847 rs763669672 |
555 | C>R | No |
ClinGen ExAC gnomAD |
|
rs1298329848 CA399640935 |
556 | Y>* | No |
ClinGen TOPMed |
|
TCGA novel | 556 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs751161142 CA8581848 |
558 | S>C | No |
ClinGen ExAC gnomAD |
|
rs756896276 CA8581849 |
559 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs780839001 CA8581851 |
563 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs780839001 CA8581850 |
563 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs779992820 CA399641156 |
567 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs779992820 CA8581853 |
567 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749050042 CA8581854 |
568 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399641194 rs749050042 |
568 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581855 rs200736746 |
569 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8581857 rs747215649 |
570 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1597807062 CA399641257 |
571 | Y>* | No |
ClinGen Ensembl |
|
rs1463535667 CA399641281 |
572 | K>N | No |
ClinGen gnomAD |
|
CA399641307 rs1422663613 |
573 | G>E | No |
ClinGen TOPMed |
|
CA399641340 rs1195262755 COSM979584 |
574 | E>D | endometrium Variant assessed as Somatic; 4.625e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
CA8581859 rs776656858 |
575 | T>I | No |
ClinGen ExAC gnomAD |
|
CA8581858 rs771044194 |
575 | T>P | No |
ClinGen ExAC gnomAD |
|
CA8581860 rs759576346 |
576 | C>W | No |
ClinGen ExAC gnomAD |
|
rs770312444 CA399641431 |
579 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581861 rs770312444 |
579 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399641670 rs1252893119 |
580 | L>W | No |
ClinGen gnomAD |
|
CA8581881 rs768951645 |
585 | C>Y | No |
ClinGen ExAC gnomAD |
|
CA399641909 rs1341773315 |
587 | A>V | No |
ClinGen gnomAD |
|
CA8581884 rs147189145 |
589 | R>Q | No |
ClinGen ESP ExAC gnomAD |
|
CA8581882 rs115595331 |
589 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA399642007 rs760327746 |
591 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs765899422 CA8581887 |
594 | T>A | No |
ClinGen ExAC gnomAD |
|
rs984893952 CA290794455 |
597 | N>S | No |
ClinGen Ensembl |
|
CA399642178 rs1356694509 |
598 | F>L | No |
ClinGen gnomAD |
|
CA8581890 rs765042177 |
602 | P>T | No |
ClinGen ExAC gnomAD |
|
CA399642397 rs1416075211 |
605 | S>N | No |
ClinGen gnomAD |
|
rs908019467 CA290794469 |
607 | P>S | No |
ClinGen Ensembl |
|
rs752514887 CA8581891 |
609 | K>E | No |
ClinGen ExAC gnomAD |
|
rs758134032 CA8581892 |
614 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399642530 rs758134032 |
614 | Y>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs375307262 CA8581894 |
618 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs138846121 CA8581895 |
619 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs758918681 CA8581909 |
620 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs201009923 CA290794802 |
621 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs201009923 CA8581911 |
621 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA399642781 rs762805981 |
622 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581912 rs762805981 |
622 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581913 rs564211340 |
625 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8581914 rs147433219 |
627 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA290794830 rs1028647207 |
627 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
rs1372942259 CA399642869 |
629 | D>N | No |
ClinGen gnomAD |
|
rs1034847479 CA290794839 |
635 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs780100870 CA8581916 |
635 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs780100870 CA8581917 |
635 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs754944509 CA8581918 |
637 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA290794844 rs1005967012 |
638 | G>V | No |
ClinGen Ensembl |
|
rs1366914876 CA399642977 |
639 | S>F | No |
ClinGen TOPMed |
|
CA8581919 rs148491713 |
640 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA399642991 rs1567973025 |
640 | S>R | No |
ClinGen Ensembl |
|
CA8581920 rs748651876 |
641 | M>T | No |
ClinGen ExAC gnomAD |
|
rs200460212 CA399643007 |
642 | E>K | No |
ClinGen 1000Genomes TOPMed |
|
CA290794871 rs200460212 |
642 | E>Q | No |
ClinGen 1000Genomes TOPMed |
|
CA8581922 rs202120747 |
643 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs772613961 CA8581921 |
643 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 645 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA290794878 rs968142464 |
646 | L>Q | No |
ClinGen TOPMed gnomAD |
|
rs924224785 CA290794899 |
648 | A>G | No |
ClinGen TOPMed |
|
CA399643066 rs1489280394 |
648 | A>T | No |
ClinGen TOPMed |
|
rs769294024 CA8581927 |
652 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399643161 rs1237947373 |
655 | S>F | No |
ClinGen TOPMed |
|
CA8581928 rs775467602 |
659 | V>D | No |
ClinGen ExAC gnomAD |
|
rs762856453 CA8581929 |
660 | S>N | No |
ClinGen ExAC gnomAD |
|
CA8581930 rs763917751 |
663 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs751402794 CA290794920 |
664 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs751402794 CA8581931 |
664 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581933 rs766626800 |
668 | H>N | No |
ClinGen ExAC gnomAD |
|
rs779112242 CA8581936 |
673 | I>L | No |
ClinGen ExAC |
|
CA290794951 rs753292452 |
673 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs947366339 CA290794954 |
674 | E>K | No |
ClinGen gnomAD |
|
rs759001465 CA8581938 |
679 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1362544917 CA399645184 |
679 | N>S | No |
ClinGen TOPMed |
|
CA399645221 rs1449492957 |
681 | R>W | No |
ClinGen TOPMed gnomAD |
|
rs780967120 CA8581942 |
684 | N>K | No |
ClinGen ExAC gnomAD |
|
CA290794966 rs935173141 |
685 | T>I | No |
ClinGen TOPMed |
|
rs942124398 CA290795080 |
688 | G>D | No |
ClinGen TOPMed |
|
rs1597808144 CA399645596 |
690 | P>R | No |
ClinGen Ensembl |
|
rs1467544178 CA399645691 |
694 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs748812082 CA8581964 |
694 | W>R | No |
ClinGen ExAC gnomAD |
|
CA290795098 rs1036815066 |
695 | I>T | No |
ClinGen TOPMed gnomAD |
|
CA399645733 rs1433318265 |
697 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs139297967 CA8581966 |
700 | E>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8581967 rs774403067 |
701 | Q>P | No |
ClinGen ExAC gnomAD |
|
rs748013360 CA8581968 |
702 | H>Q | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 705 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1474839908 CA399645899 |
705 | W>C | No |
ClinGen TOPMed |
|
CA399645907 rs1345112906 |
706 | G>* | No |
ClinGen gnomAD |
|
TCGA novel | 707 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1253979681 CA399645972 |
710 | P>L | No |
ClinGen gnomAD |
|
CA8581969 rs771942502 |
711 | G>E | No |
ClinGen ExAC gnomAD |
|
CA399646011 rs1238108293 |
712 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs772908052 CA8581970 |
712 | I>T | No |
ClinGen ExAC gnomAD |
|
CA8581971 rs760493388 |
714 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs775785857 CA8581973 |
714 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs775785857 CA399646040 |
714 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581972 rs760493388 |
714 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs764070743 CA8581975 |
716 | A>V | No |
ClinGen ExAC gnomAD |
|
rs199522414 CA8581977 |
721 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8581978 rs768029287 |
721 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs199522414 CA8581976 |
721 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399646127 rs1171468770 |
722 | S>R | No |
ClinGen gnomAD |
|
rs1597808199 CA399646164 |
724 | V>A | No |
ClinGen Ensembl |
|
rs373280448 CA8581979 |
725 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs896391672 CA290795181 |
729 | Y>H | No |
ClinGen TOPMed |
|
CA8581982 rs575801693 |
731 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA399646296 rs1337262162 |
733 | D>N | No |
ClinGen gnomAD |
|
rs778254570 CA8581984 |
734 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs146598205 CA8581985 |
737 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs539966924 CA8582005 |
742 | D>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8582007 rs770900986 |
750 | D>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs931779390 CA290795302 COSM3402912 |
756 | Q>K | Variant assessed as Somatic; impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
rs781106916 CA8582008 |
759 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582009 rs373128299 |
760 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs768782416 CA8582010 |
761 | D>E | No |
ClinGen ExAC gnomAD |
|
CA399646949 rs1378367385 |
761 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs565230756 CA8582011 COSM1383425 |
762 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA399647024 rs1457064945 |
764 | R>H | No |
ClinGen TOPMed gnomAD |
|
rs752362508 CA8582014 |
765 | S>C | No |
ClinGen ExAC gnomAD |
|
CA399647065 rs1409891804 |
766 | T>I | No |
ClinGen TOPMed gnomAD |
|
rs761138202 CA8582015 |
768 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1320893924 CA399647276 |
777 | R>C | No |
ClinGen gnomAD |
|
rs550459405 CA8582016 |
777 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA290795340 rs897472320 |
779 | Y>* | No |
ClinGen TOPMed |
|
CA399647314 rs1263886169 |
779 | Y>H | No |
ClinGen gnomAD |
|
CA8582019 rs764798398 |
781 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM187118 CA8582020 rs764798398 |
781 | D>N | large_intestine Variant assessed as Somatic; 4.63e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs757901877 RCV001008672 CA8582021 |
782 | R>* | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA399647478 rs1567973617 |
782 | R>Q | No |
ClinGen Ensembl |
|
rs1380659269 CA399647486 |
783 | N>D | No |
ClinGen TOPMed |
|
TCGA novel | 784 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8582040 rs763803925 |
789 | S>F | No |
ClinGen ExAC gnomAD |
|
CA399647553 rs763803925 |
789 | S>Y | No |
ClinGen ExAC gnomAD |
|
CA399647556 rs1449655631 |
790 | F>V | No |
ClinGen gnomAD |
|
rs756769687 CA8582042 |
793 | G>R | No |
ClinGen ExAC gnomAD |
|
CA8582043 rs767568354 |
794 | A>G | No |
ClinGen ExAC gnomAD |
|
rs1333103106 CA399647605 |
795 | A>T | No |
ClinGen TOPMed |
|
rs1176238352 CA399647616 |
795 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA8582044 rs750371440 |
797 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582045 rs557243665 |
797 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA399647640 rs557243665 |
797 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1365702633 CA399647669 |
799 | P>L | No |
ClinGen gnomAD |
|
rs1365702633 CA399647667 |
799 | P>R | No |
ClinGen gnomAD |
|
rs143861583 CA8582046 |
800 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA399647678 rs1297158657 |
800 | P>Q | No |
ClinGen TOPMed gnomAD |
|
CA8582047 rs143861583 |
800 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA399647672 rs143861583 |
800 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA399647687 rs758640560 |
801 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs758640560 CA8582048 |
801 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs777914248 CA8582049 |
802 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582050 rs747092658 |
802 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
TCGA novel | 811 | F>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA399647873 rs1333070883 |
812 | Y>C | No |
ClinGen gnomAD |
|
CA399647905 rs1224177505 |
814 | R>K | No |
ClinGen gnomAD |
|
CA399647975 rs1188388459 |
817 | A>S | No |
ClinGen gnomAD |
|
TCGA novel | 819 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs777210503 CA8582055 |
819 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs777210503 CA399648016 |
819 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582057 rs763851770 |
821 | V>I | No |
ClinGen ExAC gnomAD |
|
CA399648096 rs1161291806 |
823 | L>R | No |
ClinGen gnomAD |
|
rs761482950 CA8582059 |
825 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA290795614 rs892253613 |
826 | M>I | No |
ClinGen TOPMed |
|
CA8582060 rs767124812 |
827 | G>A | No |
ClinGen ExAC gnomAD |
|
rs1318376547 CA399648185 |
828 | G>A | No |
ClinGen TOPMed gnomAD |
|
CA399648187 rs1318376547 |
828 | G>V | No |
ClinGen TOPMed gnomAD |
|
CA399648197 rs1343627034 |
829 | P>R | No |
ClinGen gnomAD |
|
rs1438940310 CA399648213 |
830 | Y>* | No |
ClinGen gnomAD |
|
CA399648221 rs1208451263 |
831 | C>Y | No |
ClinGen gnomAD |
|
rs1366998857 CA399648238 |
832 | Q>R | No |
ClinGen gnomAD |
|
CA8582062 rs756105722 |
834 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
RCV000761956 CA8582063 rs142029931 |
834 | R>H | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs753677285 CA8582064 COSM1243164 |
835 | R>* | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs145894379 CA8582065 |
835 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs376464742 CA8582067 |
837 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8582069 rs781303588 |
839 | R>Q | No |
ClinGen ExAC gnomAD |
|
COSM3421581 CA8582068 rs757375034 |
839 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA8582071 rs770356660 |
840 | V>M | No |
ClinGen ExAC gnomAD |
|
CA8582073 rs368588909 |
844 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8582085 rs751817547 |
844 | T>R | No |
ClinGen ExAC |
|
rs757503886 CA399648441 |
845 | S>C | No |
ClinGen ExAC gnomAD |
|
rs757503886 CA8582086 |
845 | S>F | No |
ClinGen ExAC gnomAD |
|
rs1371275867 CA399648444 |
846 | R>Q | No |
ClinGen gnomAD |
|
rs781224353 CA8582087 |
846 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs199782327 CA8582090 |
851 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1338435664 CA399648506 |
851 | A>V | No |
ClinGen gnomAD |
|
rs1356799815 CA399648540 |
854 | V>L | No |
ClinGen gnomAD |
|
CA8582093 rs779448510 |
859 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399648604 rs1274680895 COSM1710317 |
859 | E>K | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs1193628928 CA399648634 |
861 | L>V | No |
ClinGen gnomAD |
|
rs922782151 CA290795931 |
865 | S>L | No |
ClinGen Ensembl |
|
rs748471928 CA8582094 |
866 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA290795934 rs748471928 |
866 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1241063012 CA399648719 |
867 | D>E | No |
ClinGen gnomAD |
|
rs1567974035 COSM280005 CA399648715 |
867 | D>G | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
CA8582095 rs761376045 |
867 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs772669073 CA8582096 |
868 | F>S | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 869 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs760298762 CA8582097 |
871 | N>D | No |
ClinGen ExAC gnomAD |
|
CA8582098 rs770333514 |
871 | N>S | No |
ClinGen ExAC gnomAD |
|
CA399648801 rs1166295273 |
873 | D>E | No |
ClinGen TOPMed gnomAD |
|
CA399648788 rs1225918247 |
873 | D>H | No |
ClinGen TOPMed |
|
CA8582100 rs759437296 |
874 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762678938 CA8582103 |
879 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs374737961 CA8582102 |
879 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA8582105 rs750610399 |
884 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750610399 CA8582106 |
884 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs766349836 CA8582107 |
886 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399649061 rs1257297280 |
887 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs754439008 CA8582108 |
887 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs368166689 CA399649120 |
888 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs372141725 CA8582110 COSM3755557 |
888 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
CA8582109 rs368166689 |
888 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8582113 rs144659252 |
890 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1248877516 CA399649194 |
890 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA8582114 rs746619506 |
891 | V>L | No |
ClinGen ExAC gnomAD |
|
rs529982247 CA399649340 |
894 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs529982247 CA8582117 |
894 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582116 rs148513528 |
894 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs749955095 CA290796044 |
895 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
CA8582118 rs769738213 |
895 | P>S | No |
ClinGen ExAC gnomAD |
|
CA290796045 rs1033069370 |
896 | W>C | No |
ClinGen TOPMed |
|
CA399649475 rs1404605816 |
898 | L>V | No |
ClinGen gnomAD |
|
rs144243880 CA8582120 |
899 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA8582119 rs775340803 |
899 | R>W | No |
ClinGen ExAC gnomAD |
|
CA8582122 rs773535831 |
900 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582125 rs146094809 |
901 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8582124 rs201054294 |
901 | M>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA399649558 rs1232368721 |
902 | P>S | No |
ClinGen gnomAD |
|
rs1432863250 CA399649750 |
907 | I>M | No |
ClinGen TOPMed |
|
CA8582127 rs765906970 |
909 | M>T | No |
ClinGen ExAC gnomAD |
|
rs753242935 CA8582128 |
910 | E>* | No |
ClinGen ExAC gnomAD |
|
CA8582129 rs758845692 |
911 | Y>S | No |
ClinGen ExAC gnomAD |
|
CA399649937 rs777967716 |
912 | D>A | No |
ClinGen ExAC gnomAD |
|
CA8582130 rs777967716 |
912 | D>G | No |
ClinGen ExAC gnomAD |
|
CA399650047 rs1203647391 |
914 | P>L | No |
ClinGen gnomAD |
|
rs1452236012 CA399650079 |
915 | L>F | No |
ClinGen gnomAD |
|
rs1236673460 CA399651726 |
918 | G>A | No |
ClinGen TOPMed |
|
CA399651789 rs1597809661 |
921 | E>V | No |
ClinGen Ensembl |
|
CA8582150 rs780890039 |
922 | L>F | No |
ClinGen ExAC gnomAD |
|
CA8582151 rs567180800 |
924 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
COSM187121 CA8582152 rs755673095 |
925 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA8582153 rs779511124 |
925 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs992186406 CA290796491 |
927 | F>S | No |
ClinGen Ensembl |
|
CA8582155 rs768488018 |
931 | L>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1482650138 CA399652004 |
931 | L>F | No |
ClinGen gnomAD |
|
rs778841639 CA8582156 |
932 | R>K | No |
ClinGen ExAC gnomAD |
|
CA8582157 rs200666570 |
933 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs200666570 CA8582158 |
933 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8582159 rs777042333 |
933 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs917913687 CA290796578 |
934 | M>I | No |
ClinGen Ensembl |
|
CA399652060 rs1443905150 |
934 | M>R | No |
ClinGen Ensembl |
|
rs759800860 CA290796588 |
935 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582161 rs140099235 |
935 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs759800860 CA8582160 |
935 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763033339 CA8582163 |
938 | G>E | No |
ClinGen ExAC gnomAD |
|
rs905697967 CA290796589 |
938 | G>R | No |
ClinGen gnomAD |
|
CA8582164 rs764514996 |
940 | T>S | No |
ClinGen ExAC gnomAD |
|
rs1352665989 CA399652152 |
941 | L>R | No |
ClinGen gnomAD |
|
TCGA novel | 944 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA399652180 rs1402724304 |
944 | E>Q | No |
ClinGen gnomAD |
|
rs755797621 CA8582169 |
945 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs151308193 CA8582168 |
945 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs771176491 CA8582170 |
946 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs753288783 CA8582171 |
946 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582172 rs754503459 |
947 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs778769699 CA8582173 |
948 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582174 rs748092457 |
950 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA399652236 rs1165464595 |
950 | S>T | No |
ClinGen TOPMed |
|
rs772032908 CA8582175 |
951 | E>K | No |
ClinGen ExAC gnomAD |
|
rs777741549 CA399652292 |
952 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582176 rs777741549 |
952 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399652312 rs1412856934 |
953 | T>A | No |
ClinGen TOPMed |
|
rs140596928 CA8582178 |
953 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA399652309 rs1412856934 |
953 | T>P | No |
ClinGen TOPMed |
|
CA8582180 rs763011893 |
954 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399652385 rs150066200 |
955 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8582181 rs150066200 |
955 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs990773936 CA290796639 |
955 | P>S | No |
ClinGen TOPMed gnomAD |
|
CA399652417 rs1176718699 |
957 | C>R | No |
ClinGen TOPMed gnomAD |
|
rs1405336706 CA399652424 |
957 | C>Y | No |
ClinGen gnomAD |
|
rs367718366 CA8582182 |
959 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA399652548 rs1391078489 |
963 | H>D | No |
ClinGen gnomAD |
|
rs767975139 CA8582184 |
964 | P>R | No |
ClinGen ExAC gnomAD |
|
CA8582186 rs760960237 |
965 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1225869065 CA399652628 |
967 | P>R | No |
ClinGen TOPMed |
|
CA399652618 rs1284472986 |
967 | P>S | No |
ClinGen gnomAD |
|
TCGA novel | 972 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs574007745 CA290796661 |
973 | R>C | No |
ClinGen TOPMed |
|
rs777181833 CA8582189 |
973 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs764772808 CA8582191 |
975 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA8582192 rs752214879 |
977 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399652928 rs1161043887 |
978 | Y>F | No |
ClinGen gnomAD |
|
CA8582195 rs746806222 |
979 | S>T | No |
ClinGen ExAC gnomAD |
|
rs757116427 CA8582196 |
982 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs1343715972 CA399652997 |
983 | C>R | No |
ClinGen gnomAD |
|
TCGA novel | 984 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8582198 rs749504437 |
986 | D>H | No |
ClinGen ExAC gnomAD |
|
CA399653091 rs1303881636 |
988 | T>M | No |
ClinGen gnomAD |
|
CA399653139 rs1409403883 |
991 | D>H | No |
ClinGen TOPMed |
|
CA399653146 rs1290522222 |
991 | D>V | No |
ClinGen gnomAD |
|
CA8582202 rs144879356 |
993 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1323184496 CA399653196 |
994 | Y>H | No |
ClinGen TOPMed gnomAD |
|
rs761083082 | 997 | H>= | Variant assessed as Somatic; 9.245e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
CA8582205 COSM1248644 rs766739363 |
998 | D>N | Variant assessed as Somatic; 0.0 impact. oesophagus [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs777075814 CA8582223 |
999 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582224 rs759759471 |
999 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs963718283 CA290767265 |
1004 | E>* | No |
ClinGen Ensembl |
|
rs530019096 CA8582225 |
1005 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs530019096 CA399623316 |
1005 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1473858130 CA399623310 |
1005 | P>S | No |
ClinGen gnomAD |
|
rs1352287987 CA399623329 |
1006 | G>A | No |
ClinGen TOPMed |
|
CA399623344 rs1326693012 |
1007 | T>S | No |
ClinGen TOPMed |
|
COSM260191 CA290767270 rs926257786 |
1010 | R>C | large_intestine Variant assessed as Somatic; impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
CA8582228 rs763675321 |
1010 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs926257786 CA399623401 |
1010 | R>S | No |
ClinGen gnomAD |
|
CA8582230 rs761845652 |
1016 | A>P | No |
ClinGen ExAC gnomAD |
|
rs145807393 CA8582231 RCV000519213 |
1016 | A>V | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA399623511 rs1380211897 |
1017 | L>M | No |
ClinGen gnomAD |
|
rs906671083 CA290767279 |
1018 | R>C | No |
ClinGen TOPMed gnomAD |
|
rs1366528827 CA399623568 |
1019 | S>F | No |
ClinGen gnomAD |
|
rs752891286 CA8582236 |
1022 | R>G | No |
ClinGen ExAC gnomAD |
|
CA8582237 rs372754665 |
1022 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8582238 rs747010251 |
1026 | H>R | No |
ClinGen ExAC gnomAD |
|
CA399623673 rs1461590726 |
1026 | H>Y | No |
ClinGen gnomAD |
|
rs771482699 CA8582239 |
1027 | M>R | No |
ClinGen ExAC gnomAD |
|
rs1195355207 CA399623737 |
1029 | S>I | No |
ClinGen gnomAD |
|
rs138718781 CA8582241 |
1030 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs532151522 CA8582240 |
1030 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8582243 rs775334145 |
1033 | P>A | No |
ClinGen ExAC gnomAD |
|
CA290767296 rs547368425 |
1035 | Y>* | No |
ClinGen 1000Genomes gnomAD |
|
rs867551940 CA290767298 |
1036 | E>G | No |
ClinGen Ensembl |
|
rs1284722457 CA399623784 |
1036 | E>K | No |
ClinGen TOPMed gnomAD |
|
CA290767300 rs868321614 |
1038 | G>V | No |
ClinGen Ensembl |
|
rs1336534511 CA399623805 |
1039 | Y>S | No |
ClinGen gnomAD |
|
CA290767302 rs765066448 |
1041 | P>L | No |
ClinGen gnomAD |
|
CA399623828 rs765066448 |
1041 | P>R | No |
ClinGen gnomAD |
|
CA399623846 rs1325358153 |
1043 | Y>C | No |
ClinGen gnomAD |
|
rs768384591 CA8582245 |
1046 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1441382343 CA399623888 |
1047 | G>D | No |
ClinGen TOPMed |
|
CA399623907 rs1222650619 |
1049 | V>M | No |
ClinGen gnomAD |
|
CA399623939 rs1197872888 |
1052 | Y>S | No |
ClinGen gnomAD |
|
rs761172021 CA8582247 |
1054 | G>R | No |
ClinGen ExAC gnomAD |
|
rs767499309 CA399623977 |
1055 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582248 rs767499309 |
1055 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1460118327 CA399623973 |
1055 | P>S | No |
ClinGen gnomAD |
|
rs760564070 CA8582250 |
1056 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1597811174 CA399623992 |
1057 | Y>S | No |
ClinGen Ensembl |
|
CA399624007 rs1271647997 |
1058 | R>C | No |
ClinGen gnomAD |
|
rs766128262 CA8582251 |
1058 | R>H | Variant assessed as Somatic; 4.622e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA399624001 rs1271647997 |
1058 | R>S | No |
ClinGen gnomAD |
|
CA399624055 rs1427639759 |
1061 | D>N | No |
ClinGen gnomAD |
|
CA8582254 rs565799517 |
1062 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA399624095 rs1379993768 |
1063 | P>T | No |
ClinGen gnomAD |
|
TCGA novel | 1064 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA290767321 rs201210876 |
1064 | R>Q | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
rs143542325 CA8582256 |
1064 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
rs781752633 CA8582257 |
1065 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA290767326 rs746339446 |
1067 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1252004903 CA399624159 |
1067 | R>Q | No |
ClinGen TOPMed |
|
CA8582258 rs746339446 |
1067 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582259 rs770324433 |
1069 | V>M | No |
ClinGen ExAC gnomAD |
|
CA8582260 rs780598071 |
1070 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs377221811 CA290767335 |
1071 | G>R | No |
ClinGen ESP TOPMed gnomAD |
|
rs377221811 CA399624223 |
1071 | G>S | No |
ClinGen ESP TOPMed gnomAD |
|
CA8582262 rs768439624 |
1073 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773813371 CA8582263 |
1073 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1267447097 CA399624308 |
1076 | V>A | No |
ClinGen gnomAD |
|
rs752722105 CA8582266 |
1079 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs372272058 CA8582267 |
1080 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1451203493 CA399624359 |
1080 | T>P | No |
ClinGen gnomAD |
|
CA399624370 rs1567975720 |
1081 | G>R | No |
ClinGen Ensembl |
|
rs1301205378 CA399624409 |
1082 | E>D | No |
ClinGen gnomAD |
|
CA399624400 rs1423866065 |
1082 | E>Q | No |
ClinGen gnomAD |
|
CA399624415 rs1352335907 |
1083 | E>K | No |
ClinGen gnomAD |
|
CA399624457 rs1597811336 |
1084 | V>G | No |
ClinGen Ensembl |
|
CA399624532 rs1317749788 |
1087 | S>R | No |
ClinGen TOPMed |
|
rs1306087846 CA399624526 |
1087 | S>T | No |
ClinGen gnomAD |
|
rs759257760 CA8582271 |
1088 | F>V | No |
ClinGen ExAC gnomAD |
|
rs1293964051 CA399624605 |
1091 | S>G | No |
ClinGen gnomAD |
|
rs148038198 CA290767346 |
1091 | S>R | No |
ClinGen ESP ExAC gnomAD |
|
TCGA novel | 1092 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA399624649 rs1304594342 |
1093 | A>D | No |
ClinGen gnomAD |
|
CA399624640 rs1290176252 |
1093 | A>S | No |
ClinGen gnomAD |
|
rs1290176252 CA399624645 |
1093 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs536852782 CA290767350 |
1094 | P>S | No |
ClinGen 1000Genomes |
|
CA399624695 rs1345526425 |
1096 | V>A | No |
ClinGen TOPMed gnomAD |
|
rs199565455 CA8582278 |
1099 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA290767355 rs965213043 |
1100 | V>I | No |
ClinGen TOPMed gnomAD |
|
CA399624787 rs1341446041 |
1101 | S>G | No |
ClinGen gnomAD |
|
TCGA novel | 1102 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1105 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs749677753 CA8582279 |
1105 | R>H | No |
ClinGen ExAC gnomAD |
|
CA8582280 rs1555644047 |
1106 | D>Y | No |
ClinGen Ensembl |
|
CA290767359 rs906470963 |
1109 | A>S | No |
ClinGen gnomAD |
|
rs906470963 CA399624957 |
1109 | A>T | No |
ClinGen gnomAD |
|
CA8582282 rs141771781 |
1110 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA399625003 rs1356187265 |
1111 | L>P | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 1112 | I>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs921009671 CA290767362 |
1112 | I>T | No |
ClinGen TOPMed |
|
CA399625026 rs1462456430 |
1113 | K>T | No |
ClinGen gnomAD |
|
rs372857776 CA8582284 |
1114 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs746463588 CA8582287 |
1116 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399625167 rs1597811639 |
1117 | T>A | No |
ClinGen Ensembl |
|
rs1597811639 CA399625164 |
1117 | T>P | No |
ClinGen Ensembl |
|
CA8582306 rs142756549 |
1121 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1481386569 CA399625233 |
1121 | R>P | No |
ClinGen TOPMed gnomAD |
|
rs1481386569 CA399625232 |
1121 | R>Q | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 1124 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1428377384 CA399625329 |
1127 | S>G | No |
ClinGen gnomAD |
|
rs192340009 CA290767406 |
1130 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs192340009 CA8582309 COSM979591 |
1130 | V>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
rs762752914 CA8582310 |
1135 | T>I | No |
ClinGen ExAC gnomAD |
|
rs1288422848 CA399625498 |
1136 | R>* | No |
ClinGen gnomAD |
|
rs1339014732 CA399625501 RCV000996556 |
1136 | R>Q | No |
ClinGen ClinVar dbSNP gnomAD |
|
CA399625535 rs1407299243 |
1138 | V>L | No |
ClinGen gnomAD |
|
rs34251597 CA8582312 |
1140 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA399625679 rs1463360237 |
1144 | H>Y | No |
ClinGen Ensembl |
|
rs1285913802 CA399625734 |
1146 | I>V | No |
ClinGen gnomAD |
|
rs140065370 CA8582315 |
1147 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs140065370 CA8582314 |
1147 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8582316 rs202209610 |
1147 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8582317 rs765715419 |
1149 | T>A | No |
ClinGen ExAC gnomAD |
|
CA8582318 rs753006645 |
1149 | T>N | No |
ClinGen ExAC gnomAD |
|
rs377605075 CA8582320 |
1150 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
rs751189554 CA8582321 |
1150 | R>H | No |
ClinGen ExAC gnomAD |
|
CA290767421 rs866035774 |
1152 | Y>C | No |
ClinGen Ensembl |
|
CA399625847 rs1410422291 |
1152 | Y>D | No |
ClinGen gnomAD |
|
CA290767423 rs940735813 |
1153 | R>Q | No |
ClinGen TOPMed gnomAD |
|
rs1401516302 CA399625878 |
1153 | R>W | No |
ClinGen gnomAD |
|
CA8582324 rs374577901 |
1157 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
rs1597812397 CA399627687 |
1159 | V>G | No |
ClinGen Ensembl |
|
CA8582359 rs763547533 |
1163 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1407769615 CA399627873 |
1167 | Q>H | No |
ClinGen gnomAD |
|
rs1396162520 CA399627890 |
1168 | K>R | No |
ClinGen TOPMed |
|
CA8582363 rs762101272 |
1170 | S>L | No |
ClinGen ExAC gnomAD |
|
rs1456904699 CA399628050 |
1173 | V>M | No |
ClinGen TOPMed |
|
rs776396855 CA8582365 |
1174 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1270660547 CA399628152 |
1176 | Q>H | No |
ClinGen gnomAD |
|
rs1379420211 CA399628190 |
1177 | L>F | No |
ClinGen TOPMed |
|
CA399628162 rs570146382 |
1177 | L>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1417151952 CA399628186 |
1177 | L>S | No |
ClinGen TOPMed |
|
CA8582367 rs765885546 |
1180 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1171179818 CA399628270 |
1181 | K>E | No |
ClinGen Ensembl |
|
CA399628290 rs1351444841 |
1181 | K>R | No |
ClinGen gnomAD |
|
rs144769876 CA290767690 |
1183 | L>M | No |
ClinGen ESP |
|
CA8582368 rs753233684 |
1186 | G>R | No |
ClinGen ExAC gnomAD |
|
rs754975579 CA8582369 |
1187 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582370 rs374717974 |
1187 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8582371 rs748020292 |
1189 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582401 rs772531609 |
1191 | T>I | No |
ClinGen ExAC gnomAD |
|
CA399628737 rs1329494392 |
1192 | G>R | No |
ClinGen gnomAD |
|
rs200797891 CA8582404 |
1194 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582403 rs760878813 |
1194 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582405 rs776132687 |
1195 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs4419104 CA8582406 |
1196 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA290767739 rs4419104 |
1196 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1365201970 CA399628901 |
1197 | E>Q | No |
ClinGen TOPMed gnomAD |
|
CA399628985 rs1470176517 |
1199 | Q>E | No |
ClinGen TOPMed gnomAD |
|
CA8582409 rs151113401 |
1200 | R>C | No |
ClinGen ESP ExAC gnomAD |
|
rs763880701 CA8582410 |
1200 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs151113401 CA290767744 |
1200 | R>S | No |
ClinGen ESP ExAC gnomAD |
|
rs141066536 CA399629096 |
1203 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA399629093 rs141066536 |
1203 | T>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8582411 rs141066536 |
1203 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs199932716 CA290767748 |
1205 | G>A | No |
ClinGen TOPMed gnomAD |
|
CA399629219 rs1437273463 |
1209 | C>F | No |
ClinGen gnomAD |
|
CA8582416 rs778999936 |
1213 | V>I | No |
ClinGen ExAC gnomAD |
|
rs748180882 CA8582417 |
1214 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs144176225 CA8582418 |
1214 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
rs1000472563 CA290767756 |
1216 | N>D | No |
ClinGen TOPMed |
|
rs778135782 CA8582419 |
1216 | N>K | No |
ClinGen ExAC gnomAD |
|
CA8582422 rs771175667 |
1219 | A>G | No |
ClinGen ExAC gnomAD |
|
CA8582421 rs771175667 |
1219 | A>V | No |
ClinGen ExAC gnomAD |
|
CA8582424 rs769522374 |
1223 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1368358679 CA399629600 |
1225 | F>Y | No |
ClinGen TOPMed |
|
rs775153843 CA8582425 |
1226 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA399629620 rs1481806507 |
1226 | R>L | No |
ClinGen gnomAD |
|
CA399629616 rs1481806507 COSM1383428 |
1226 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs762486604 CA8582426 |
1227 | T>N | No |
ClinGen ExAC gnomAD |
|
rs764160554 CA8582427 |
1228 | P>S | No |
ClinGen ExAC gnomAD |
|
rs774144532 CA8582428 |
1229 | R>* | No |
ClinGen ExAC gnomAD |
|
rs201223272 CA8582429 |
1229 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399629726 rs1385348153 |
1231 | M>I | No |
ClinGen gnomAD |
|
CA8582430 rs767189221 |
1232 | T>I | No |
ClinGen ExAC gnomAD |
|
CA8582431 rs750182361 |
1233 | A>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 1237 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA399629873 rs1462298549 |
1238 | A>D | No |
ClinGen gnomAD |
|
CA290767770 rs575163095 |
1240 | R>Q | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
TCGA novel | 1241 | V>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8582432 rs755219641 |
1242 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs1224602428 CA399629957 |
1242 | Q>R | No |
ClinGen gnomAD |
|
rs765372689 CA8582433 |
1243 | G>R | No |
ClinGen ExAC gnomAD |
|
CA290767774 rs1036319936 |
1244 | E>K | No |
ClinGen Ensembl |
|
rs747441144 CA8582437 |
1247 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs749675222 CA290767781 |
1251 | G>R | No |
ClinGen Ensembl |
|
CA8582440 rs746176257 |
1251 | G>V | No |
ClinGen ExAC gnomAD |
|
CA290767786 rs202174111 |
1255 | R>C | No |
ClinGen gnomAD |
|
CA8582442 rs371692918 |
1255 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs748893707 CA8582443 |
1256 | L>F | No |
ClinGen ExAC gnomAD |
|
CA8582460 rs779890513 |
1274 | P>A | No |
ClinGen ExAC gnomAD |
|
rs1199956387 CA399630602 |
1274 | P>L | No |
ClinGen gnomAD |
|
rs1432826772 CA399630630 |
1276 | Y>H | No |
ClinGen gnomAD |
|
CA399630707 rs1420435184 |
1280 | G>R | No |
ClinGen gnomAD |
|
CA8582464 rs150329319 |
1281 | W>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8582465 rs772060073 |
1282 | V>I | No |
ClinGen ExAC gnomAD |
|
CA8582466 rs773133272 |
1283 | A>S | No |
ClinGen ExAC gnomAD |
|
rs760506538 CA8582467 |
1285 | L>F | No |
ClinGen ExAC gnomAD |
|
CA8582468 rs760506538 |
1285 | L>V | No |
ClinGen ExAC gnomAD |
|
CA290768009 rs913638999 |
1289 | L>F | No |
ClinGen TOPMed |
|
rs35100530 CA8582492 |
1290 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 1290 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs774627571 CA8582493 |
1291 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1395924301 CA399631015 |
1291 | A>T | No |
ClinGen TOPMed |
|
CA8582495 rs137947865 |
1298 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs761292846 CA8582497 |
1302 | V>A | No |
ClinGen ExAC gnomAD |
|
rs750479086 CA8582496 |
1302 | V>M | No |
ClinGen ExAC gnomAD |
|
rs201933670 CA290768015 |
1304 | F>S | No |
ClinGen Ensembl |
|
rs1173006756 CA399631279 |
1306 | L>P | No |
ClinGen gnomAD |
|
CA290768017 rs916065681 |
1306 | L>V | No |
ClinGen gnomAD |
|
rs948880576 CA290768019 |
1310 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs766922644 CA8582498 |
1310 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs755370304 CA8582500 |
1311 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1448171133 CA399631353 |
1312 | K>N | No |
ClinGen gnomAD |
|
rs1567977360 CA399631349 |
1312 | K>R | No |
ClinGen Ensembl |
|
CA399631367 rs1597813808 |
1314 | S>P | No |
ClinGen Ensembl |
|
rs1354232796 CA399631409 |
1317 | T>S | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 1318 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs752375520 CA8582502 |
1319 | E>K | No |
ClinGen ExAC gnomAD |
|
rs1256447488 CA399631464 |
1322 | A>T | No |
ClinGen TOPMed gnomAD |
|
COSM1383429 CA8582504 rs777298772 |
1322 | A>V | Variant assessed as Somatic; 4.644e-05 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA290768027 rs1053084351 |
1323 | A>D | No |
ClinGen Ensembl |
|
CA399631504 rs1472099111 |
1325 | E>D | No |
ClinGen gnomAD |
|
CA8582505 rs746451353 |
1325 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs1356135828 CA399631510 |
1326 | Y>H | No |
ClinGen TOPMed |
|
CA399631516 rs1597813860 |
1326 | Y>S | No |
ClinGen Ensembl |
|
CA399631534 rs1446216140 |
1327 | H>Q | No |
ClinGen TOPMed |
|
CA399631546 rs1567977422 |
1329 | G>S | No |
ClinGen Ensembl |
|
rs1597813881 CA399631566 |
1331 | K>N | No |
ClinGen Ensembl |
|
rs200871551 CA8582510 |
1332 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8582509 rs769599374 |
1332 | P>T | No |
ClinGen ExAC gnomAD |
|
CA8582511 rs748402395 |
1333 | P>L | No |
ClinGen ExAC gnomAD |
|
rs888963438 CA399631584 |
1335 | P>L | No |
ClinGen TOPMed |
|
rs888963438 CA290768038 |
1335 | P>R | No |
ClinGen TOPMed |
|
rs576868740 CA8582512 |
1335 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399631586 rs1597813908 |
1336 | T>P | No |
ClinGen Ensembl |
|
RCV000627296 CA399631617 rs143154224 |
1341 | Q>* | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA8582514 rs143154224 |
1341 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs570981828 CA8582515 |
1342 | V>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1266368038 CA399631623 |
1342 | V>I | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 1344 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8582518 rs765660313 |
1344 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 1345 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 1346 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8582520 rs758052419 |
1346 | T>I | No |
ClinGen ExAC gnomAD |
|
CA290768045 rs1026022504 |
1346 | T>S | No |
ClinGen Ensembl |
|
CA399631666 rs1278045754 |
1349 | P>L | No |
ClinGen gnomAD |
|
rs763680724 CA8582521 |
1350 | N>S | No |
ClinGen ExAC gnomAD |
|
rs547056058 CA8582522 |
1352 | A>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
TCGA novel | 1353 | P>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1260923021 CA399631698 |
1354 | A>V | No |
ClinGen TOPMed gnomAD |
|
rs1378944630 CA399631702 |
1355 | S>L | No |
ClinGen gnomAD |
|
CA8582529 rs781030048 |
1357 | P>S | No |
ClinGen ExAC gnomAD |
|
CA290768055 rs929477066 |
1358 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA8582530 rs745794725 |
1358 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA399631722 rs1399459969 |
1359 | P>A | No |
ClinGen gnomAD |
|
rs568590941 CA8582535 |
1361 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs536045727 CA290768063 |
1362 | T>A | No |
ClinGen 1000Genomes |
|
CA399631742 rs1359001796 |
1362 | T>I | No |
ClinGen TOPMed |
|
rs1333011065 CA399631749 |
1364 | A>S | No |
ClinGen gnomAD |
|
rs1234269938 CA399631764 |
1366 | A>D | No |
ClinGen TOPMed gnomAD |
|
rs1022684402 CA290768067 |
1367 | P>R | No |
ClinGen Ensembl |
|
CA290768065 rs895895811 |
1367 | P>S | No |
ClinGen TOPMed gnomAD |
|
rs772432810 CA8582537 |
1369 | P>S | No |
ClinGen ExAC gnomAD |
|
rs773551154 CA290768069 |
1370 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582540 rs567668572 |
1370 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582539 rs567668572 |
1370 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8582538 rs773551154 |
1370 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 1371 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA290768073 rs926116811 |
1374 | L>P | No |
ClinGen gnomAD |
|
rs1375611934 CA399631839 |
1375 | P>H | No |
ClinGen gnomAD |
|
rs765598952 CA8582543 |
1375 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1158743327 CA399631852 |
1376 | Q>* | No |
ClinGen gnomAD |
|
CA399631959 rs1279444614 |
1381 | S>F | No |
ClinGen TOPMed |
|
rs751181300 CA8582548 |
1382 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763803424 CA8582547 |
1382 | R>T | No |
ClinGen ExAC gnomAD |
|
rs1449013320 CA399631994 |
1384 | E>Q | No |
ClinGen gnomAD |
1 associated diseases with P78357
[MIM: 224690]: Meier-Gorlin syndrome 1 (MGORS1)
A syndrome characterized by bilateral microtia, aplasia/hypoplasia of the patellae, and severe intrauterine and postnatal growth retardation with short stature and poor weight gain. Additional clinical findings include anomalies of cranial sutures, microcephaly, apparently low-set and simple ears, microstomia, full lips, highly arched or cleft palate, micrognathia, genitourinary tract anomalies, and various skeletal anomalies. While almost all cases have primordial dwarfism with substantial prenatal and postnatal growth retardation, not all cases have microcephaly, and microtia and absent/hypoplastic patella are absent in some. Despite the presence of microcephaly, intellect is usually normal. {ECO:0000269|PubMed:21358631, ECO:0000269|PubMed:21358632, ECO:0000269|PubMed:21358633}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A syndrome characterized by bilateral microtia, aplasia/hypoplasia of the patellae, and severe intrauterine and postnatal growth retardation with short stature and poor weight gain. Additional clinical findings include anomalies of cranial sutures, microcephaly, apparently low-set and simple ears, microstomia, full lips, highly arched or cleft palate, micrognathia, genitourinary tract anomalies, and various skeletal anomalies. While almost all cases have primordial dwarfism with substantial prenatal and postnatal growth retardation, not all cases have microcephaly, and microtia and absent/hypoplastic patella are absent in some. Despite the presence of microcephaly, intellect is usually normal. {ECO:0000269|PubMed:21358631, ECO:0000269|PubMed:21358632, ECO:0000269|PubMed:21358633}. Note=The disease is caused by variants affecting the gene represented in this entry.
1 regional properties for P78357
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | Small GTP-binding protein domain | 5 - 159 | IPR005225 |
5 GO annotations of cellular component
Name | Definition |
---|---|
integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
paranodal junction | A highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. It flanks the node of Ranvier in myelinated nerve and electrically isolates the myelinated from unmyelinated nerve segments and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath. |
paranode region of axon | An axon part that is located adjacent to the nodes of Ranvier and surrounded by lateral loop portions of myelin sheath. |
presynaptic active zone membrane | The membrane portion of the presynaptic active zone; it is the site where docking and fusion of synaptic vesicles occurs for the release of neurotransmitters. |
2 GO annotations of molecular function
Name | Definition |
---|---|
SH3 domain binding | Binding to a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins. |
signaling receptor activity | Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response. |
17 GO annotations of biological process
Name | Definition |
---|---|
axonogenesis | De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells. |
cell adhesion | The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
central nervous system myelination | The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier. |
cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures. |
mitochondrion organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components. |
myelination in peripheral nervous system | The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier. |
neuromuscular junction development, skeletal muscle fiber | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction that targets a skeletal muscle fiber. |
neuromuscular process controlling balance | Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors. |
neuromuscular process controlling posture | Any process in which an organism voluntarily modulates its posture, the alignment of its anatomical parts. |
neuron projection morphogenesis | The process in which the anatomical structures of a neuron projection are generated and organized. A neuron projection is any process extending from a neural cell, such as axons or dendrites. |
neuronal action potential propagation | The propagation of an action potential along an axon, away from the soma. |
paranodal junction assembly | Formation of the junction between an axon and the glial cell that forms the myelin sheath. Paranodal junctions form at each paranode, i.e. at the ends of the unmyelinated nodes of Ranvier. |
paranodal junction maintenance | The maintenance of a paranodal junction, a highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. A paranodal junction flanks the node of Ranvier in myelinated nerve, electrically isolates the myelinated from unmyelinated nerve segments, and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath. |
postsynaptic density organization | A process that results in the assembly, arrangement of constituent parts, or disassembly of a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. |
protein localization to juxtaparanode region of axon | Any process in which a protein is transported to, or maintained at, the juxtaparanode region of an axon. |
protein localization to paranode region of axon | A cellular protein localization process in which a protein is transported to, or maintained at, the paranode region of an axon. |
signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
10 | 20 | 30 | 40 | 50 | 60 |
MMHLRLFCIL | LAAVSGAEGW | GYYGCDEELV | GPLYARSLGA | SSYYSLLTAP | RFARLHGISG |
70 | 80 | 90 | 100 | 110 | 120 |
WSPRIGDPNP | WLQIDLMKKH | RIRAVATQGS | FNSWDWVTRY | MLLYGDRVDS | WTPFYQRGHN |
130 | 140 | 150 | 160 | 170 | 180 |
STFFGNVNES | AVVRHDLHFH | FTARYIRIVP | LAWNPRGKIG | LRLGLYGCPY | KADILYFDGD |
190 | 200 | 210 | 220 | 230 | 240 |
DAISYRFPRG | VSRSLWDVFA | FSFKTEEKDG | LLLHAEGAQG | DYVTLELEGA | HLLLHMSLGS |
250 | 260 | 270 | 280 | 290 | 300 |
SPIQPRPGHT | TVSAGGVLND | QHWHYVRVDR | FGRDVNFTLD | GYVQRFILNG | DFERLNLDTE |
310 | 320 | 330 | 340 | 350 | 360 |
MFIGGLVGAA | RKNLAYRHNF | RGCIENVIFN | RVNIADLAVR | RHSRITFEGK | VAFRCLDPVP |
370 | 380 | 390 | 400 | 410 | 420 |
HPINFGGPHN | FVQVPGFPRR | GRLAVSFRFR | TWDLTGLLLF | SRLGDGLGHV | ELTLSEGQVN |
430 | 440 | 450 | 460 | 470 | 480 |
VSIAQSGRKK | LQFAAGYRLN | DGFWHEVNFV | AQENHAVISI | DDVEGAEVRV | SYPLLIRTGT |
490 | 500 | 510 | 520 | 530 | 540 |
SYFFGGCPKP | ASRWDCHSNQ | TAFHGCMELL | KVDGQLVNLT | LVEGRRLGFY | AEVLFDTCGI |
550 | 560 | 570 | 580 | 590 | 600 |
TDRCSPNMCE | HDGRCYQSWD | DFICYCELTG | YKGETCHTPL | YKESCEAYRL | SGKTSGNFTI |
610 | 620 | 630 | 640 | 650 | 660 |
DPDGSGPLKP | FVVYCDIREN | RAWTVVRHDR | LWTTRVTGSS | MERPFLGAIQ | YWNASWEEVS |
670 | 680 | 690 | 700 | 710 | 720 |
ALANASQHCE | QWIEFSCYNS | RLLNTAGGYP | YSFWIGRNEE | QHFYWGGSQP | GIQRCACGLD |
730 | 740 | 750 | 760 | 770 | 780 |
RSCVDPALYC | NCDADQPQWR | TDKGLLTFVD | HLPVTQVVIG | DTNRSTSEAQ | FFLRPLRCYG |
790 | 800 | 810 | 820 | 830 | 840 |
DRNSWNTISF | HTGAALRFPP | IRANHSLDVS | FYFRTSAPSG | VFLENMGGPY | CQWRRPYVRV |
850 | 860 | 870 | 880 | 890 | 900 |
ELNTSRDVVF | AFDVGNGDEN | LTVHSDDFEF | NDDEWHLVRA | EINVKQARLR | VDHRPWVLRP |
910 | 920 | 930 | 940 | 950 | 960 |
MPLQTYIWME | YDQPLYVGSA | ELKRRPFVGC | LRAMRLNGVT | LNLEGRANAS | EGTSPNCTGH |
970 | 980 | 990 | 1000 | 1010 | 1020 |
CAHPRLPCFH | GGRCVERYSY | YTCDCDLTAF | DGPYCNHDIG | GFFEPGTWMR | YNLQSALRSA |
1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
AREFSHMLSR | PVPGYEPGYI | PGYDTPGYVP | GYHGPGYRLP | DYPRPGRPVP | GYRGPVYNVT |
1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
GEEVSFSFST | SSAPAVLLYV | SSFVRDYMAV | LIKDDGTLQL | RYQLGTSPYV | YQLTTRPVTD |
1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
GQPHSINITR | VYRNLFIQVD | YFPLTEQKFS | LLVDSQLDSP | KALYLGRVME | TGVIDPEIQR |
1210 | 1220 | 1230 | 1240 | 1250 | 1260 |
YNTPGFSGCL | SGVRFNNVAP | LKTHFRTPRP | MTAELAEALR | VQGELSESNC | GAMPRLVSEV |
1270 | 1280 | 1290 | 1300 | 1310 | 1320 |
PPELDPWYLP | PDFPYYHDEG | WVAILLGFLV | AFLLLGLVGM | LVLFYLQNHR | YKGSYHTNEP |
1330 | 1340 | 1350 | 1360 | 1370 | 1380 |
KAAHEYHPGS | KPPLPTSGPA | QVPTPTAAPN | QAPASAPAPA | PTPAPAPGPR | DQNLPQILEE |
SRSE |