P55168
Gene name |
CCNC |
Protein name |
Cyclin-C |
Names |
|
Species |
Gallus gallus (Chicken) |
KEGG Pathway |
gga:421791 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P55168
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P55168-F1 | Predicted | AlphaFoldDB |
No variants for P55168
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for P55168 | |||||
No associated diseases with P55168
4 regional properties for P55168
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Ubiquitin-conjugating enzyme E2 | 4 - 154 | IPR000608 |
| domain | Ubiquitin-associated domain | 160 - 200 | IPR015940 |
| active_site | Ubiquitin-conjugating enzyme, active site | 80 - 96 | IPR023313 |
| domain | Vertebrate ubiquitin-conjugating enzyme E2 K, UBA domain | 163 - 200 | IPR042599 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| mediator complex | A protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The mediator complex is required for activation of transcription of most protein-coding genes, but can also act as a transcriptional corepressor. The Saccharomyces complex contains several identifiable subcomplexes: a head domain comprising Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p; and a regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| cyclin-dependent protein serine/threonine kinase regulator activity | Modulates the activity of a cyclin-dependent protein serine/threonine kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. |
| regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P47821 | SSN8 | RNA polymerase II holoenzyme cyclin-like subunit | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q3ZCK5 | CCNC | Cyclin-C | Bos taurus (Bovine) | PR |
| P25008 | CycC | Cyclin-C | Drosophila melanogaster (Fruit fly) | PR |
| P24863 | CCNC | Cyclin-C | Homo sapiens (Human) | PR |
| Q62447 | Ccnc | Cyclin-C | Mus musculus (Mouse) | PR |
| P39947 | Ccnc | Cyclin-C | Rattus norvegicus (Rat) | PR |
| Q28F72 | ccnc | Cyclin-C | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAGNFWQSSH | YLQWILDKQD | LLKERQKDLK | FLSEEEYWKL | QIFFTNVIQA | LGEHLKLRQQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VIATATVYFK | RFYARYSLKS | IDPVLMAPTC | VFLASKVEEF | GVVSNTRLIS | AATSVLKTRF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SYAFPKEFPY | RMNHILECEF | YLLELMDCCL | IVYHPYRPLL | QYVQDMGQED | MLLPLAWRIV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| NDTYRTDLCL | LYPPFMIALA | CLHVACVVQQ | KDARQWFAEL | SVDMEKILEI | IRVILKLYEQ |
| 250 | 260 | 270 | 280 | ||
| WKNFDERKEM | ATILSKMPKP | KPPPNSEGEQ | GPNGSQNSSY | SQS |