P51957
Gene name |
NEK4 (STK2) |
Protein name |
Serine/threonine-protein kinase Nek4 |
Names |
Never in mitosis A-related kinase 4, NimA-related protein kinase 4, Serine/threonine-protein kinase 2, Serine/threonine-protein kinase NRK2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:6787 |
EC number |
2.7.11.1: Protein-serine/threonine kinases |
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
148-171 (Activation loop from InterPro)
Target domain |
6-261 (Protein kinase domain) |
Relief mechanism |
|
Assay |
|
Autoinhibited structure

Activated structure

1 structures for P51957
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
AF-P51957-F1 | Predicted | AlphaFoldDB |
679 variants for P51957
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
rs770418305 RCV000256411 |
673 | I>missing | Ciliopathy [ClinVar] | Yes |
ClinVar dbSNP |
rs866548949 CA74805650 |
2 | P>S | No |
ClinGen TOPMed gnomAD |
|
rs866548949 CA353177971 |
2 | P>T | No |
ClinGen TOPMed gnomAD |
|
rs1483005585 CA353177933 |
4 | A>V | No |
ClinGen TOPMed |
|
rs1450796029 CA353177917 |
5 | A>V | No |
ClinGen gnomAD |
|
CA2446785 rs774411586 |
6 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs761660228 CA2446786 |
6 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353177852 rs1366282943 |
8 | Y>* | No |
ClinGen TOPMed |
|
rs533922432 CA2446784 |
9 | L>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA74805617 rs965468861 |
9 | L>V | No |
ClinGen Ensembl |
|
CA74805609 rs866261741 |
10 | R>L | No |
ClinGen TOPMed gnomAD |
|
CA74805613 rs866261741 |
10 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA353177825 rs1221524995 |
11 | V>I | No |
ClinGen gnomAD |
|
rs1578718228 CA353177807 |
12 | V>L | No |
ClinGen Ensembl |
|
rs749128065 CA2446783 |
16 | S>N | No |
ClinGen ExAC gnomAD |
|
CA353177699 rs1301909055 CA353177702 |
16 | S>R | No |
ClinGen TOPMed gnomAD |
|
CA74805603 rs867478237 |
19 | E>* | No |
ClinGen gnomAD |
|
CA2446782 rs775089099 |
19 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353177652 rs867478237 |
19 | E>Q | No |
ClinGen gnomAD |
|
CA2446781 rs571241761 |
20 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1011704502 CA74805596 |
21 | T>M | No |
ClinGen TOPMed |
|
rs1486966539 CA353177586 |
22 | L>F | No |
ClinGen gnomAD |
|
rs1410497552 CA353177517 |
25 | H>N | No |
ClinGen gnomAD |
|
rs780576006 CA2446779 |
25 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 26 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA2446778 rs756861186 |
26 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs748592123 CA2446777 |
28 | D>E | No |
ClinGen ExAC gnomAD |
|
rs1310313508 CA353177442 |
28 | D>G | No |
ClinGen TOPMed |
|
rs1490499440 CA353177445 |
28 | D>Y | No |
ClinGen TOPMed gnomAD |
|
CA74805576 rs779524634 |
29 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446776 rs779524634 |
29 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446774 rs754287482 |
30 | K>E | No |
ClinGen ExAC gnomAD |
|
rs866902962 CA74805549 |
30 | K>N | No |
ClinGen Ensembl |
|
rs754287482 CA353177404 |
30 | K>Q | No |
ClinGen ExAC gnomAD |
|
CA74805548 rs953507943 |
31 | Q>R | No |
ClinGen TOPMed |
|
rs1490005633 CA353176581 |
34 | I>T | No |
ClinGen TOPMed |
|
CA2446759 rs565352473 |
34 | I>V | No |
ClinGen ExAC gnomAD |
|
rs745519786 CA2446758 |
37 | L>R | No |
ClinGen ExAC gnomAD |
|
rs1578714100 CA353176466 |
38 | N>T | No |
ClinGen Ensembl |
|
rs776407088 CA2446757 |
39 | L>F | No |
ClinGen ExAC gnomAD |
|
rs560443902 CA2446756 |
40 | R>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA353176432 rs1338917509 |
40 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs1179458722 CA353176357 |
43 | S>C | No |
ClinGen gnomAD |
|
rs199730489 CA2446755 |
45 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446754 rs779250361 |
45 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs755565214 CA2446753 |
46 | E>G | No |
ClinGen ExAC gnomAD |
|
CA353176291 rs1237485089 |
46 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA2446750 rs753439121 COSM1753312 |
47 | R>Q | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA2446751 rs780569606 |
47 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750596148 CA2446749 COSM1047143 |
48 | R>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA74804256 rs764961340 |
48 | R>Q | No |
ClinGen Ensembl |
|
CA353176211 rs1203899001 |
50 | A>T | No |
ClinGen gnomAD |
|
CA353176112 rs1209727669 |
52 | Q>E | No |
ClinGen TOPMed gnomAD |
|
CA543059686 rs1480067148 |
52 | Q>P* | No |
ClinGen gnomAD |
|
CA353176100 rs1578713835 |
52 | Q>R | No |
ClinGen Ensembl |
|
rs751689087 CA2446746 |
53 | E>A | No |
ClinGen ExAC gnomAD |
|
CA2446747 rs757250522 |
53 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs757250522 CA74804245 |
53 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446745 rs763884940 |
56 | L>P | No |
ClinGen ExAC gnomAD |
|
rs1245397572 CA353175894 |
59 | Q>R | No |
ClinGen gnomAD |
|
CA2446744 rs144937048 |
60 | L>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA74804206 rs11543008 |
64 | N>D | No |
ClinGen TOPMed |
|
rs1314524583 CA353175639 |
64 | N>T | No |
ClinGen TOPMed |
|
CA353175661 rs11543008 |
64 | N>Y | No |
ClinGen TOPMed |
|
CA353175529 rs1395969348 |
67 | T>A | No |
ClinGen gnomAD |
|
CA353175430 rs1248851875 |
69 | K>R | No |
ClinGen TOPMed |
|
CA2446737 rs772792374 |
70 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353175323 rs1386559959 |
72 | W>R | No |
ClinGen gnomAD |
|
rs1578713563 CA353175174 |
75 | G>R | No |
ClinGen Ensembl |
|
CA353175151 rs1559453699 |
75 | G>V | No |
ClinGen Ensembl |
|
rs1578713531 CA353175132 |
76 | D>G | No |
ClinGen Ensembl |
|
rs769218178 CA2446736 |
77 | G>D | No |
ClinGen ExAC gnomAD |
|
rs770259048 CA2446733 |
80 | Y>C | No |
ClinGen ExAC gnomAD |
|
rs1480481874 CA353174909 |
82 | V>A | No |
ClinGen TOPMed |
|
rs1559453657 CA353174887 |
83 | M>V | No |
ClinGen Ensembl |
|
rs200146700 CA74804104 |
89 | G>S | No |
ClinGen 1000Genomes |
|
CA74804095 rs915193103 |
91 | L>F | No |
ClinGen Ensembl |
|
CA353174631 rs1294059279 |
92 | Y>* | No |
ClinGen gnomAD |
|
CA2446730 rs757519207 |
93 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs375390104 CA2446729 |
93 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 97 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA2446728 rs777829988 |
98 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446727 rs758535124 |
99 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1372467949 CA353174408 |
101 | Q>R | No |
ClinGen TOPMed |
|
CA74804066 rs372401024 |
103 | L>R | No |
ClinGen Ensembl |
|
rs1406680974 CA353174372 |
104 | P>L | No |
ClinGen gnomAD |
|
CA353174351 rs1162083539 |
105 | E>A | No |
ClinGen gnomAD |
|
CA2446723 rs180821211 |
107 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA353174271 rs1452390905 |
109 | V>I | No |
ClinGen gnomAD |
|
CA353174217 rs1336126490 |
110 | E>A | No |
ClinGen TOPMed |
|
CA74804039 rs969082885 |
111 | W>* | No |
ClinGen Ensembl |
|
rs1361753739 CA353174164 |
113 | V>I | No |
ClinGen gnomAD |
|
rs1252996831 CA353174094 |
116 | A>T | No |
ClinGen gnomAD |
|
rs572514993 CA2446721 |
116 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs145975959 CA2446720 |
119 | L>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA353174015 rs1271637046 |
120 | Q>L | No |
ClinGen gnomAD |
|
CA2446703 rs766191472 |
121 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA353173212 rs1226608666 |
122 | L>F | No |
ClinGen gnomAD |
|
CA2446702 rs755919954 |
122 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1319742387 CA353173195 |
123 | H>L | No |
ClinGen gnomAD |
|
rs750076497 CA2446701 |
123 | H>Q | No |
ClinGen ExAC gnomAD |
|
CA353173205 rs1324558890 |
123 | H>Y | No |
ClinGen gnomAD |
|
rs761364427 CA353173134 |
126 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446699 rs761364427 |
126 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1271476570 CA353173121 |
126 | H>Q | No |
ClinGen Ensembl |
|
rs1468625663 CA353173126 |
126 | H>R | No |
ClinGen gnomAD |
|
CA2446698 rs774018771 |
128 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1475385541 CA353173070 |
129 | H>L | No |
ClinGen gnomAD |
|
CA2446697 rs141525620 |
129 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA74802888 rs1016628410 |
130 | R>* | No |
ClinGen TOPMed gnomAD |
|
CA353173052 rs1195464703 |
130 | R>Q | No |
ClinGen gnomAD |
|
rs760089918 CA2446696 |
131 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
CA353173021 rs1376425619 |
132 | L>V | No |
ClinGen TOPMed |
|
rs773322989 CA2446695 |
133 | K>E | No |
ClinGen ExAC gnomAD |
|
CA353172945 rs1437168372 |
135 | Q>R | No |
ClinGen TOPMed |
|
CA2446694 rs771309069 |
136 | N>D | No |
ClinGen ExAC gnomAD |
|
rs1407930915 CA353172907 |
138 | F>V | No |
ClinGen Ensembl |
|
rs1299722705 CA353172897 |
139 | L>R | No |
ClinGen gnomAD |
|
CA74802880 rs896504421 COSM162872 |
140 | T>A | breast [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA74802877 rs1055110439 |
142 | T>I | No |
ClinGen Ensembl |
|
rs747375884 CA2446693 |
143 | N>S | No |
ClinGen ExAC gnomAD |
|
CA353172861 rs1559451959 |
144 | I>L | No |
ClinGen Ensembl |
|
CA74802870 rs373761384 |
145 | I>V | No |
ClinGen ESP TOPMed gnomAD |
|
rs1228569475 CA353172800 |
148 | G>E | No |
ClinGen gnomAD |
|
rs748170330 CA2446690 |
153 | A>S | No |
ClinGen ExAC gnomAD |
|
rs748170330 CA2446689 |
153 | A>T | No |
ClinGen ExAC gnomAD |
|
CA353172751 rs1318238571 |
153 | A>V | No |
ClinGen gnomAD |
|
CA2446687 rs370377370 |
154 | R>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs370377370 CA2446688 |
154 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs755904931 CA2446685 |
154 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs755904931 CA2446684 |
154 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353172723 rs2230535 |
156 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs767227136 CA2446682 |
158 | N>S | No |
ClinGen ExAC gnomAD |
|
CA2446681 rs756981933 |
159 | H>Y | No |
ClinGen ExAC gnomAD |
|
CA353172660 rs1403093283 |
162 | M>V | No |
ClinGen TOPMed gnomAD |
|
CA353172644 rs1450241529 |
163 | A>P | No |
ClinGen gnomAD |
|
rs147067004 CA2446679 |
164 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA2446678 rs762422817 |
164 | S>N | No |
ClinGen ExAC gnomAD |
|
CA353172616 rs762422817 |
164 | S>T | No |
ClinGen ExAC gnomAD |
|
rs777169522 CA2446677 |
165 | T>A | No |
ClinGen ExAC |
|
CA74802842 rs919054678 |
167 | I>T | No |
ClinGen TOPMed gnomAD |
|
CA74802839 rs976008612 |
170 | P>L | No |
ClinGen Ensembl |
|
CA2446675 rs760980667 |
171 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs965927095 CA74802835 |
171 | Y>C | No |
ClinGen Ensembl |
|
rs1435847671 CA353172435 |
172 | Y>C | No |
ClinGen gnomAD |
|
rs773581679 CA2446673 |
173 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446672 rs772215659 |
174 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1017512733 CA74802824 |
179 | S>A | No |
ClinGen Ensembl |
|
rs528293777 CA2446671 |
179 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs774612882 CA2446670 |
180 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1559451709 CA353172066 |
182 | P>A | No |
ClinGen Ensembl |
|
CA2446667 rs749365739 |
183 | Y>* | No |
ClinGen ExAC gnomAD |
|
CA2446668 rs768759100 |
183 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446665 rs779295565 |
185 | Y>* | No |
ClinGen ExAC gnomAD |
|
rs200500262 CA2446666 |
185 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1310167833 CA353171906 |
186 | K>E | No |
ClinGen gnomAD |
|
CA353171867 rs1578708094 |
186 | K>N | No |
ClinGen Ensembl |
|
CA2446655 rs774378130 |
188 | D>V | No |
ClinGen ExAC gnomAD |
|
CA353171560 rs1559451499 |
190 | W>C | No |
ClinGen Ensembl |
|
CA353171527 rs1559451494 |
191 | A>V | No |
ClinGen Ensembl |
|
rs1559451476 CA353171506 |
192 | L>P | No |
ClinGen Ensembl |
|
CA353171400 rs1578707657 |
195 | C>F | No |
ClinGen Ensembl |
|
rs1317651910 CA353171408 |
195 | C>S | No |
ClinGen gnomAD |
|
rs1414408785 CA353171215 |
201 | T>S | No |
ClinGen gnomAD |
|
rs767856624 CA2446652 |
202 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 206 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA2446651 rs762213830 |
207 | N>D | No |
ClinGen ExAC gnomAD |
|
CA2446650 rs202108231 |
207 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446649 rs140931278 |
209 | K>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs763039392 CA2446648 |
210 | D>N | No |
ClinGen ExAC gnomAD |
|
rs763039392 CA353171024 COSM1047139 |
210 | D>Y | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs896765821 CA74802704 |
211 | M>I | No |
ClinGen TOPMed gnomAD |
|
CA2446646 rs769785712 |
211 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446647 rs769785712 |
211 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353170985 rs769785712 |
211 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353170988 rs1466000683 |
211 | M>V | No |
ClinGen gnomAD |
|
rs1323260547 CA353170874 |
213 | S>F | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 213 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1323260547 CA353170895 |
213 | S>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA353170855 rs1282009631 |
214 | L>S | No |
ClinGen gnomAD |
|
CA2446645 rs745791470 |
216 | Y>F | No |
ClinGen ExAC gnomAD |
|
CA74802698 rs779390122 |
217 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA2446643 rs200701452 |
217 | R>W | Variant assessed as Somatic; 4.621e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs770822899 CA2446642 |
219 | I>V | No |
ClinGen ExAC gnomAD |
|
rs1456517188 CA353170635 |
222 | K>E | No |
ClinGen TOPMed |
|
rs776674608 CA2446625 |
224 | P>A | No |
ClinGen ExAC gnomAD |
|
rs1029871 CA2446624 VAR_040915 |
225 | P>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1029871 CA353169568 |
225 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1029871 CA353169569 |
225 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA353169547 rs1442425229 |
226 | M>V | No |
ClinGen TOPMed gnomAD |
|
CA2446622 rs772889417 |
227 | P>R | No |
ClinGen ExAC gnomAD |
|
rs1559449396 CA353169500 |
228 | R>T | No |
ClinGen Ensembl |
|
rs771971349 CA2446620 |
229 | D>G | No |
ClinGen ExAC gnomAD |
|
rs754453537 CA353169188 |
238 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1275468155 CA353169193 |
238 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA353169196 rs1344864502 |
238 | I>V | No |
ClinGen gnomAD |
|
CA2446615 rs35778416 VAR_040916 |
239 | R>G | No |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs1251859077 CA353169152 |
239 | R>I | No |
ClinGen TOPMed |
|
rs777334017 CA2446614 |
240 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA74801429 rs201283699 |
243 | S>G | No |
ClinGen 1000Genomes |
|
CA2446610 rs764357487 |
249 | R>S | No |
ClinGen ExAC gnomAD |
|
VAR_040917 rs56408749 CA2446609 |
250 | P>L | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA353168829 rs56408749 |
250 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA74801403 rs112088437 |
251 | S>F | No |
ClinGen Ensembl |
|
rs1026943141 CA74801398 |
253 | R>S | No |
ClinGen TOPMed gnomAD |
|
rs1422187314 CA353168732 |
254 | S>N | No |
ClinGen gnomAD |
|
CA2446606 rs565173568 |
256 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1418077493 CA353168634 |
257 | R>G | No |
ClinGen gnomAD |
|
CA2446605 rs776868546 |
257 | R>K | No |
ClinGen ExAC gnomAD |
|
CA353168590 rs1388102148 |
258 | Q>R | No |
ClinGen TOPMed |
|
CA2446602 rs773261136 |
263 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs760526340 COSM1186323 CA2446603 |
263 | R>W | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA2446600 rs545019249 |
266 | S>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA2446601 rs545019249 |
266 | S>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1301605274 CA353168253 |
266 | S>P | No |
ClinGen TOPMed |
|
rs752524765 CA74801359 |
267 | F>S | No |
ClinGen Ensembl |
|
CA74801358 rs748487681 |
268 | F>S | No |
ClinGen gnomAD |
|
CA353168122 rs1340521223 |
269 | L>S | No |
ClinGen TOPMed |
|
TCGA novel | 269 | L>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA74801350 rs961040506 |
270 | E>K | No |
ClinGen Ensembl |
|
CA353167946 rs1245805119 |
272 | T>A | No |
ClinGen gnomAD |
|
rs149674873 CA2446597 |
274 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs149674873 CA2446596 |
274 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA74799164 rs868091702 |
276 | T>A | No |
ClinGen TOPMed |
|
CA353166433 rs1386061171 |
276 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA353166432 rs1386061171 |
276 | T>N | No |
ClinGen TOPMed gnomAD |
|
CA2446576 rs768230593 |
277 | S>C | No |
ClinGen ExAC gnomAD |
|
rs1389851215 CA353166374 |
279 | N>S | No |
ClinGen gnomAD |
|
rs1176091407 CA353166360 |
280 | N>D | No |
ClinGen gnomAD |
|
rs762586566 CA2446575 |
281 | I>F | No |
ClinGen ExAC gnomAD |
|
CA2446574 rs775176848 |
281 | I>M | No |
ClinGen ExAC gnomAD |
|
rs762586566 CA353166319 |
281 | I>V | No |
ClinGen ExAC gnomAD |
|
CA74799142 rs890570023 |
282 | K>* | No |
ClinGen TOPMed |
|
CA353166279 rs1427977406 |
283 | N>S | No |
ClinGen gnomAD |
|
CA353166282 rs1199727291 |
283 | N>Y | No |
ClinGen gnomAD |
|
rs769162317 CA2446573 |
284 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446572 rs745421103 |
287 | Q>* | No |
ClinGen ExAC gnomAD |
|
CA2446571 rs772572206 |
288 | S>A | No |
ClinGen ExAC gnomAD |
|
rs772649466 CA2446570 |
290 | P>S | No |
ClinGen ExAC |
|
rs1471654410 CA353165915 |
295 | V>F | No |
ClinGen TOPMed gnomAD |
|
CA353165854 COSM1579327 rs1256493217 |
296 | S>C | NS [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA2446567 rs755451946 |
297 | G>R | No |
ClinGen ExAC gnomAD |
|
rs746455096 CA353165816 |
298 | E>D | No |
ClinGen gnomAD |
|
rs1559447247 CA353165766 |
301 | S>P | No |
ClinGen Ensembl |
|
CA2446565 rs780365839 |
302 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353165560 rs1333961597 |
306 | I>V | No |
ClinGen TOPMed gnomAD |
|
rs756106216 CA2446564 |
307 | H>P | No |
ClinGen ExAC gnomAD |
|
rs750536100 CA2446563 |
308 | P>R | No |
ClinGen ExAC gnomAD |
|
rs139449613 CA2446561 |
309 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA2446559 rs751561403 |
310 | P>R | No |
ClinGen ExAC gnomAD |
|
rs1037636522 CA74799098 |
310 | P>S | No |
ClinGen TOPMed |
|
CA2446556 rs35580792 |
314 | E>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs763858832 CA2446557 |
314 | E>Q | No |
ClinGen ExAC gnomAD |
|
rs1185204055 CA353165231 |
315 | G>D | No |
ClinGen gnomAD |
|
CA353165241 rs1452649397 |
315 | G>S | No |
ClinGen TOPMed |
|
rs1204464437 CA353165226 |
316 | S>A | No |
ClinGen TOPMed |
|
rs757407528 CA74799092 |
319 | Y>C | No |
ClinGen Ensembl |
|
rs1384285813 CA353165094 |
320 | I>M | No |
ClinGen TOPMed |
|
CA2446554 rs769511464 |
320 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446539 rs751473373 |
322 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353162961 rs1356545832 |
323 | E>D | No |
ClinGen gnomAD |
|
rs1285187416 CA353162946 |
324 | G>S | No |
ClinGen TOPMed gnomAD |
|
CA2446536 rs752504984 |
326 | C>R | No |
ClinGen ExAC gnomAD |
|
CA74792793 rs981249735 |
326 | C>Y | No |
ClinGen Ensembl |
|
CA2446535 rs764732912 |
329 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1455796410 CA353162696 |
329 | Q>R | No |
ClinGen TOPMed gnomAD |
|
CA2446533 rs759226181 |
330 | E>* | No |
ClinGen ExAC gnomAD |
|
CA353162571 rs1578679698 |
331 | K>N | No |
ClinGen Ensembl |
|
CA353162535 rs1179706542 |
332 | P>L | No |
ClinGen TOPMed |
|
rs776208902 CA2446532 |
334 | A>V | No |
ClinGen ExAC gnomAD |
|
CA353162456 rs1158276144 |
335 | S>P | No |
ClinGen gnomAD |
|
CA353162329 rs1477610677 |
340 | S>L | No |
ClinGen gnomAD |
|
rs774959821 CA2446528 |
340 | S>P | No |
ClinGen ExAC gnomAD |
|
rs778837018 CA2446526 |
343 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353162193 rs1451639696 |
344 | L>P | No |
ClinGen gnomAD |
|
rs1208589070 CA353162157 |
346 | A>S | No |
ClinGen TOPMed gnomAD |
|
CA353162151 rs1208589070 |
346 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs1358320918 CA353162130 |
347 | H>R | No |
ClinGen TOPMed |
|
rs770577123 CA2446524 |
349 | C>G | No |
ClinGen ExAC gnomAD |
|
CA2446523 rs746086484 |
349 | C>Y | No |
ClinGen ExAC gnomAD |
|
rs374806162 CA353162054 |
351 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs374806162 CA2446522 |
351 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1301296416 CA353162050 |
351 | Q>P | No |
ClinGen TOPMed |
|
CA353162034 rs1415474762 |
352 | D>G | No |
ClinGen TOPMed |
|
rs111406927 CA74792749 |
354 | S>G | No |
ClinGen Ensembl |
|
CA2446520 rs747119472 |
354 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1578679431 CA353161975 |
356 | T>I | No |
ClinGen Ensembl |
|
CA353161980 rs1578679446 |
356 | T>P | No |
ClinGen Ensembl |
|
rs1438913095 CA353161973 |
357 | T>A | No |
ClinGen gnomAD |
|
VAR_040918 rs2230537 CA2446519 |
357 | T>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
TCGA novel | 358 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1319984623 CA353161902 |
361 | T>P | No |
ClinGen gnomAD |
|
rs758338516 CA2446518 |
362 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA74792731 rs758338516 |
362 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353161876 rs1455510068 |
362 | I>V | No |
ClinGen gnomAD |
|
CA2446517 rs752648674 |
364 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353161803 rs752648674 |
364 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446515 rs754779685 |
365 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1192487561 CA353161715 |
367 | I>V | No |
ClinGen TOPMed |
|
rs574702003 CA74792718 |
368 | D>N | No |
ClinGen Ensembl |
|
rs866321024 CA74792713 |
369 | I>N | No |
ClinGen Ensembl |
|
CA2446514 rs367778423 |
369 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA353161566 rs373596899 |
371 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
rs373596899 CA2446512 |
371 | P>T | No |
ClinGen ESP ExAC gnomAD |
|
CA353161533 rs1194259610 |
372 | A>T | No |
ClinGen TOPMed |
|
CA353161515 rs1424438814 |
373 | K>* | No |
ClinGen TOPMed |
|
rs763549025 CA2446510 |
374 | G>A | No |
ClinGen ExAC gnomAD |
|
CA2446509 rs763549025 |
374 | G>E | No |
ClinGen ExAC gnomAD |
|
CA2446511 rs772859657 |
374 | G>R | No |
ClinGen ExAC gnomAD |
|
CA2446506 COSM283199 rs770168568 |
379 | S>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA353161256 rs1255363770 |
380 | D>A | No |
ClinGen TOPMed gnomAD |
|
rs201270296 CA2446503 |
384 | Q>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs747027271 CA2446502 |
385 | E>* | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 385 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs777828147 CA2446501 |
386 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1321098578 CA353160863 |
388 | P>L | No |
ClinGen TOPMed gnomAD |
|
CA353160808 rs1357157582 |
390 | Y>N | No |
ClinGen gnomAD |
|
CA2446497 rs754764185 |
393 | A>G | No |
ClinGen ExAC gnomAD |
|
rs1207742319 CA353160670 |
393 | A>T | No |
ClinGen gnomAD |
|
rs753599638 CA2446496 |
398 | G>E | No |
ClinGen ExAC gnomAD |
|
rs267599895 CA74792667 |
398 | G>R | No |
ClinGen Ensembl |
|
rs779794006 CA2446495 |
399 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1484667297 CA353160357 |
400 | I>V | No |
ClinGen gnomAD |
|
rs1248139319 CA353160304 |
401 | C>F | No |
ClinGen gnomAD |
|
CA2446494 rs755831854 |
401 | C>R | No |
ClinGen ExAC gnomAD |
|
rs1187562586 CA353160254 |
402 | S>N | No |
ClinGen gnomAD |
|
CA353160270 rs1187562586 |
402 | S>T | No |
ClinGen gnomAD |
|
CA353160098 rs1367589380 |
404 | S>F | No |
ClinGen TOPMed |
|
rs1236018574 CA353159998 |
408 | E>K | No |
ClinGen TOPMed gnomAD |
|
CA74792662 rs1000369428 |
409 | E>V | No |
ClinGen Ensembl |
|
rs1281085352 CA353159897 |
410 | M>V | No |
ClinGen TOPMed |
|
rs761274201 CA2446491 |
412 | Q>* | No |
ClinGen ExAC gnomAD |
|
rs761274201 CA2446492 |
412 | Q>E | No |
ClinGen ExAC gnomAD |
|
CA74792649 rs113557128 |
414 | N>D | No |
ClinGen Ensembl |
|
CA353159663 rs1226508884 |
415 | T>I | No |
ClinGen gnomAD |
|
rs1344349123 CA353159587 |
417 | S>F | No |
ClinGen gnomAD |
|
CA2446489 rs765691634 |
418 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs369060197 CA2446487 |
418 | S>I | No |
ClinGen ExAC gnomAD |
|
rs369060197 CA2446488 |
418 | S>T | No |
ClinGen ExAC gnomAD |
|
rs760878294 CA2446485 |
420 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs138123331 CA2446484 |
421 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
COSM162873 CA2446483 rs140578743 |
422 | E>K | breast [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
CA353159328 rs1320259522 |
424 | L>P | No |
ClinGen gnomAD |
|
rs370946592 CA74792625 |
425 | I>M | No |
ClinGen ESP |
|
rs748209627 CA2446482 |
427 | M>T | No |
ClinGen ExAC gnomAD |
|
rs146877089 CA74792616 |
428 | W>* | No |
ClinGen ESP gnomAD |
|
CA74792619 rs575698152 |
428 | W>* | No |
ClinGen 1000Genomes |
|
CA2446480 rs376650906 |
430 | S>F | No |
ClinGen ESP ExAC gnomAD |
|
rs1192867950 CA353159024 |
431 | D>A | No |
ClinGen TOPMed |
|
CA353158939 rs1438882076 |
433 | V>L | No |
ClinGen TOPMed |
|
CA2446478 rs779988639 |
435 | G>V | No |
ClinGen ExAC gnomAD |
|
rs750078366 CA2446476 |
436 | E>K | No |
ClinGen ExAC gnomAD |
|
CA353158728 rs1358915870 |
437 | K>E | No |
ClinGen TOPMed |
|
CA353158622 rs1244143711 |
439 | E>D | No |
ClinGen gnomAD |
|
TCGA novel | 439 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA353158594 rs1320049350 |
440 | P>L | No |
ClinGen gnomAD |
|
CA74792601 rs939394955 |
441 | V>M | No |
ClinGen Ensembl |
|
rs953093777 CA74792599 |
443 | P>R | No |
ClinGen TOPMed |
|
rs751051307 CA2446472 |
445 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs756748397 CA2446473 |
445 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs765715530 CA2446471 |
446 | P>L | No |
ClinGen ExAC gnomAD |
|
CA353158331 rs1411202402 |
447 | L>Q | No |
ClinGen gnomAD |
|
rs1370779293 CA353158318 |
448 | I>V | No |
ClinGen gnomAD |
|
rs1045044328 CA74792587 |
452 | K>N | No |
ClinGen Ensembl |
|
CA353158143 rs1393115584 |
452 | K>R | No |
ClinGen gnomAD |
|
CA353158119 rs930731896 |
453 | P>A | No |
ClinGen gnomAD |
|
CA74792584 rs930731896 |
453 | P>S | No |
ClinGen gnomAD |
|
CA353158059 rs1167473925 |
454 | K>E | No |
ClinGen gnomAD |
|
CA74792583 rs997131627 |
455 | D>G | No |
ClinGen TOPMed |
|
rs56019351 CA2446470 VAR_040919 |
456 | Q>E | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA74791290 rs548775369 |
461 | S>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
rs528531638 CA74791275 |
462 | P>H | No |
ClinGen 1000Genomes |
|
CA353156632 rs1210554518 |
463 | K>M | No |
ClinGen TOPMed gnomAD |
|
rs1210554518 CA353156628 |
463 | K>R | No |
ClinGen TOPMed gnomAD |
|
rs1256912272 CA353156613 |
464 | L>P | No |
ClinGen TOPMed |
|
CA353156409 rs1484948394 |
469 | T>I | No |
ClinGen TOPMed |
|
CA2446460 rs780189300 |
470 | I>V | No |
ClinGen ExAC gnomAD |
|
CA353156345 rs1230535175 |
471 | L>* | No |
ClinGen gnomAD |
|
CA353156344 rs1230535175 |
471 | L>S | No |
ClinGen gnomAD |
|
rs1016562606 CA74791239 |
473 | H>Q | No |
ClinGen TOPMed gnomAD |
|
rs898388233 CA74791245 |
473 | H>Y | No |
ClinGen TOPMed gnomAD |
|
CA353156188 rs1578673920 |
474 | S>C | No |
ClinGen Ensembl |
|
CA353156156 rs1578673909 |
475 | N>T | No |
ClinGen Ensembl |
|
rs1363819003 CA353156118 |
476 | L>F | No |
ClinGen gnomAD |
|
CA74791229 rs559819855 |
477 | R>C | No |
ClinGen 1000Genomes gnomAD |
|
CA353156074 rs1319083244 |
477 | R>H | No |
ClinGen TOPMed gnomAD |
|
rs1430008958 CA353156059 |
478 | L>F | No |
ClinGen TOPMed |
|
CA353156042 rs1384443874 |
479 | L>P | No |
ClinGen gnomAD |
|
rs1384443874 CA353156032 |
479 | L>Q | No |
ClinGen gnomAD |
|
CA353156034 rs1384443874 |
479 | L>R | No |
ClinGen gnomAD |
|
CA353156006 rs1373117764 |
480 | G>D | No |
ClinGen TOPMed |
|
CA353155871 rs1464914780 |
483 | D>G | No |
ClinGen gnomAD |
|
CA74791208 rs1039505206 |
485 | P>L | No |
ClinGen TOPMed gnomAD |
|
rs1448904259 CA353155783 |
486 | A>V | No |
ClinGen gnomAD |
|
rs1246292078 CA353155767 |
487 | S>L | No |
ClinGen gnomAD |
|
rs1334800715 CA353155718 |
490 | R>* | No |
ClinGen TOPMed |
|
CA2446459 rs189287859 |
490 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA74791178 rs983218302 |
494 | I>N | No |
ClinGen TOPMed gnomAD |
|
CA353155585 rs983218302 |
494 | I>T | No |
ClinGen TOPMed gnomAD |
|
rs1255471979 CA353155544 |
495 | T>I | No |
ClinGen TOPMed gnomAD |
|
rs1280560367 CA353155494 |
497 | V>A | No |
ClinGen gnomAD |
|
rs532405462 CA353155503 |
497 | V>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
rs532405462 CA74791168 |
497 | V>M | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
CA353155482 rs1379086471 |
498 | C>* | No |
ClinGen TOPMed gnomAD |
|
rs1202679875 CA353155488 |
498 | C>R | No |
ClinGen TOPMed |
|
rs770001642 CA74791159 |
500 | H>Q | No |
ClinGen TOPMed |
|
rs1039175460 CA74791151 |
501 | A>P | No |
ClinGen TOPMed gnomAD |
|
rs1039175460 CA353155419 |
501 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs1578667794 CA353154347 |
504 | Q>E | No |
ClinGen Ensembl |
|
CA74788909 rs1027254487 |
504 | Q>R | No |
ClinGen Ensembl |
|
CA74788892 rs947499784 |
506 | A>P | No |
ClinGen TOPMed gnomAD |
|
rs372629459 CA2446447 |
508 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs750800772 CA2446445 |
509 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750800772 CA2446446 |
509 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1243835206 CA353154232 |
509 | C>S | No |
ClinGen TOPMed |
|
CA2446443 rs761934347 |
511 | I>T | No |
ClinGen ExAC gnomAD |
|
rs532796080 CA2446444 |
511 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1475687231 CA353154151 |
512 | E>G | No |
ClinGen TOPMed |
|
rs1468576250 CA353154113 |
514 | Q>* | No |
ClinGen gnomAD |
|
rs1561313198 CA353154086 |
515 | G>S | No |
ClinGen Ensembl |
|
CA2446441 rs145192979 |
517 | I>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs545339058 CA353153990 |
518 | H>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs545339058 CA2446440 |
518 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs745597302 CA2446437 |
524 | H>Q | No |
ClinGen ExAC gnomAD |
|
rs776292752 CA2446436 |
525 | N>S | No |
ClinGen ExAC gnomAD |
|
CA353153823 rs1403541232 |
526 | S>P | No |
ClinGen TOPMed gnomAD |
|
CA353153796 rs1400260532 |
527 | G>V | No |
ClinGen TOPMed |
|
CA353153754 rs1561313088 |
530 | P>L | No |
ClinGen Ensembl |
|
rs201029132 CA2446433 COSM1692830 |
534 | R>* | skin [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
rs747680044 CA2446431 |
534 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs747680044 CA2446432 |
534 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1432835958 CA353153683 |
535 | Q>H | No |
ClinGen TOPMed gnomAD |
|
CA2446430 rs780482907 |
536 | R>* | No |
ClinGen ExAC gnomAD |
|
rs1049984213 CA74788820 |
536 | R>P | No |
ClinGen TOPMed |
|
rs1049984213 CA353153677 |
536 | R>Q | No |
ClinGen TOPMed |
|
rs750998173 COSM1424571 CA2446428 |
537 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA2446429 rs377177784 |
537 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446426 rs149958844 |
538 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1187367558 | 541 | R>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
rs1285710438 CA353153603 |
541 | R>K | No |
ClinGen TOPMed |
|
rs1447543749 CA353153556 |
542 | E>G | No |
ClinGen TOPMed |
|
rs199859350 CA2446424 |
544 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA353153423 rs1485180318 |
546 | H>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA2446422 rs763074614 |
546 | H>Y | No |
ClinGen ExAC gnomAD |
|
CA74788785 rs758211058 |
547 | R>G | No |
ClinGen gnomAD |
|
CA74788780 rs745835438 |
547 | R>I | No |
ClinGen TOPMed gnomAD |
|
CA2446421 rs147428920 |
547 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA353153141 rs1578667172 |
552 | Q>* | No |
ClinGen Ensembl |
|
CA2446419 rs759535945 |
552 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs776682747 CA2446418 |
553 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770605263 CA2446417 |
554 | R>C | No |
ClinGen ExAC gnomAD |
|
CA2446416 rs142826971 |
554 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA353152984 rs1387173062 |
556 | D>V | No |
ClinGen TOPMed |
|
rs1420856802 CA353152963 |
557 | L>P | No |
ClinGen TOPMed |
|
rs1226367418 CA353152907 |
559 | A>V | No |
ClinGen gnomAD |
|
CA74788355 rs548176402 |
563 | S>L | No |
ClinGen TOPMed |
|
CA74788336 rs373012760 |
565 | P>L | No |
ClinGen ESP |
|
rs781502891 CA2446387 |
565 | P>S | No |
ClinGen ExAC gnomAD |
|
rs771482582 CA2446386 COSM3596211 |
566 | R>* | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs747269522 CA2446385 |
566 | R>Q | No |
ClinGen ExAC gnomAD |
|
VAR_040920 CA2446384 rs34986855 |
567 | F>L | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
TCGA novel | 570 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA2446382 rs752938431 |
570 | S>Y | No |
ClinGen ExAC gnomAD |
|
rs531858460 CA2446381 |
571 | H>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1175735944 CA353151668 |
573 | I>V | No |
ClinGen gnomAD |
|
rs766166059 CA2446376 |
577 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs563056783 CA2446377 |
577 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA353151430 rs563056783 |
577 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs748387811 CA74788310 |
579 | V>A | No |
ClinGen Ensembl |
|
rs1233651270 CA353151364 |
579 | V>I | No |
ClinGen gnomAD |
|
CA353151316 rs1349691121 |
580 | T>R | No |
ClinGen gnomAD |
|
CA2446373 rs767275745 |
583 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750388223 CA2446374 |
583 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353151133 rs1490324543 |
585 | E>A | No |
ClinGen TOPMed |
|
rs1292435464 CA353151103 |
586 | A>S | No |
ClinGen gnomAD |
|
CA2446370 rs768314790 |
589 | Q>H | No |
ClinGen ExAC |
|
CA2446371 rs773949439 |
589 | Q>K | No |
ClinGen ExAC gnomAD |
|
rs1167789362 CA353151019 |
589 | Q>R | No |
ClinGen gnomAD |
|
CA2446369 rs778767903 |
590 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs140752930 CA2446367 |
590 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs140752930 CA2446368 |
590 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs754472410 CA74788271 |
591 | R>G | No |
ClinGen Ensembl |
|
rs1179851533 CA353150953 |
591 | R>K | No |
ClinGen TOPMed gnomAD |
|
CA353150840 rs1176208894 |
594 | T>S | No |
ClinGen TOPMed |
|
CA2446365 rs150957144 |
596 | S>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs748545769 CA2446363 |
598 | S>R | No |
ClinGen ExAC |
|
TCGA novel | 600 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs755237491 CA2446361 |
601 | R>S | No |
ClinGen ExAC gnomAD |
|
CA353150659 rs1251302446 |
602 | S>N | No |
ClinGen TOPMed |
|
CA353150652 rs1254781931 |
602 | S>R | No |
ClinGen gnomAD |
|
CA2446360 rs749543490 |
603 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA74788249 rs141109721 |
603 | S>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs141109721 CA2446359 |
603 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA2446358 rs756200197 |
605 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353150569 rs1258750360 |
605 | M>L | No |
ClinGen gnomAD |
|
rs1300228180 CA353150487 |
607 | S>* | No |
ClinGen gnomAD |
|
CA2446332 rs183334039 |
610 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA2446331 rs764821008 COSM1719645 |
611 | R>* | NS [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA353149433 rs764821008 |
611 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446330 rs201793694 |
611 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
rs1255238589 CA353149408 |
612 | P>T | No |
ClinGen gnomAD |
|
rs776285364 CA2446329 |
613 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 618 | R>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs766058846 CA2446328 |
618 | R>K | No |
ClinGen ExAC gnomAD |
|
COSM3408804 rs775049834 CA2446326 |
620 | R>* | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA74787262 rs769037062 |
620 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446325 rs769037062 |
620 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA353149088 rs763256547 |
623 | Q>* | No |
ClinGen ExAC gnomAD |
|
CA2446324 rs763256547 |
623 | Q>K | No |
ClinGen ExAC gnomAD |
|
rs1377485883 CA353149037 |
624 | S>* | No |
ClinGen gnomAD |
|
CA353149022 rs775729740 |
625 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446323 rs775729740 |
625 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446321 rs745877601 |
628 | M>I | No |
ClinGen ExAC gnomAD |
|
CA2446322 rs769917822 |
628 | M>R | No |
ClinGen ExAC gnomAD |
|
CA353148815 rs1462441719 |
629 | S>F | No |
ClinGen TOPMed gnomAD |
|
CA353148859 rs571094373 |
629 | S>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA2446320 rs571094373 |
629 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1185514639 CA353148805 |
630 | S>P | No |
ClinGen gnomAD |
|
CA353148735 rs1476093963 |
631 | S>* | No |
ClinGen gnomAD |
|
CA2446298 rs771909270 |
633 | P>S | No |
ClinGen ExAC gnomAD |
|
rs1475953732 CA353148290 |
636 | R>K | No |
ClinGen TOPMed |
|
CA74786910 rs528461698 |
637 | K>N | No |
ClinGen 1000Genomes gnomAD |
|
rs559285627 CA2446295 |
638 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA2446293 rs779886352 |
640 | L>V | No |
ClinGen ExAC gnomAD |
|
rs1398794089 CA353148076 |
641 | S>N | No |
ClinGen TOPMed gnomAD |
|
CA2446291 rs755633588 |
641 | S>R | No |
ClinGen ExAC gnomAD |
|
rs1398794089 CA353148072 |
641 | S>T | No |
ClinGen TOPMed gnomAD |
|
rs1395282784 CA353148039 |
642 | V>I | No |
ClinGen TOPMed |
|
CA353147987 rs1310807592 |
643 | A>E | No |
ClinGen TOPMed |
|
CA353147977 rs1353824082 |
644 | G>R | No |
ClinGen TOPMed |
|
CA353147842 rs1416782075 |
647 | K>E | No |
ClinGen TOPMed |
|
CA353147775 rs1294130964 |
649 | Q>* | No |
ClinGen TOPMed |
|
rs1307049231 CA353147758 |
649 | Q>R | No |
ClinGen TOPMed |
|
rs749912464 CA2446290 |
651 | E>D | No |
ClinGen ExAC gnomAD |
|
rs764590175 CA2446289 |
652 | D>E | No |
ClinGen ExAC TOPMed |
|
rs1409750830 CA353147638 |
652 | D>G | No |
ClinGen gnomAD |
|
CA353147669 rs1169698033 |
652 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA2446287 rs763361832 |
653 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353147569 rs1247866279 |
654 | P>R | No |
ClinGen gnomAD |
|
rs1215496582 CA353147523 |
655 | L>F | No |
ClinGen gnomAD |
|
rs753303701 CA2446286 |
656 | P>R | No |
ClinGen ExAC gnomAD |
|
CA353147396 rs1286562315 |
657 | A>S | No |
ClinGen gnomAD |
|
rs765561559 CA2446285 |
658 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446284 rs759932343 |
658 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs200698397 CA2446283 |
659 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs200143654 CA2446281 |
659 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA2446282 rs200698397 |
659 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA2446280 rs773161176 |
661 | S>P | No |
ClinGen ExAC gnomAD |
|
CA2446279 rs772255532 |
662 | S>F | No |
ClinGen ExAC gnomAD |
|
CA2446277 rs774389028 |
666 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1433722232 CA353146962 |
667 | T>N | No |
ClinGen gnomAD |
|
rs1255630397 CA353146049 |
672 | Q>* | No |
ClinGen gnomAD |
|
rs567534614 CA2446265 |
672 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA353145960 rs1483590166 |
674 | H>Y | No |
ClinGen TOPMed gnomAD |
|
CA353145898 rs1250837206 |
675 | C>R | No |
ClinGen gnomAD |
|
rs754208361 CA2446263 |
675 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446261 rs576529016 |
677 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773536027 CA2446259 |
681 | L>V | No |
ClinGen ExAC |
|
CA2446258 rs767467595 |
682 | S>T | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 684 | S>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA353145569 rs1294697123 |
685 | T>A | No |
ClinGen TOPMed gnomAD |
|
rs761986836 CA2446257 |
685 | T>I | No |
ClinGen ExAC |
|
CA353145552 rs1578656821 |
686 | S>G | No |
ClinGen Ensembl |
|
CA2446255 rs774385294 |
686 | S>T | No |
ClinGen ExAC gnomAD |
|
CA353145343 rs1212023925 COSM313187 |
691 | S>L | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA2446253 rs749021904 |
693 | G>E | No |
ClinGen ExAC gnomAD |
|
CA2446252 rs775416176 |
694 | D>G | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 695 | Y>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs769765502 CA2446251 |
696 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446250 rs745485354 |
698 | G>E | No |
ClinGen ExAC gnomAD |
|
rs1217524475 CA353144263 |
699 | K>E | No |
ClinGen gnomAD |
|
CA74784610 rs1056187560 |
699 | K>R | No |
ClinGen Ensembl |
|
rs939324588 CA74784591 |
703 | N>S | No |
ClinGen TOPMed |
|
CA74784589 rs1021455990 |
705 | I>V | No |
ClinGen TOPMed |
|
CA353144025 rs1327472720 |
708 | L>F | No |
ClinGen TOPMed |
|
rs905103828 CA74784585 |
709 | V>I | No |
ClinGen TOPMed gnomAD |
|
rs375206563 CA74784574 |
710 | Q>H | No |
ClinGen TOPMed |
|
TCGA novel | 712 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs765124227 CA2446225 |
712 | M>V | No |
ClinGen ExAC gnomAD |
|
CA353143876 rs1304103385 |
714 | Q>H | No |
ClinGen gnomAD |
|
CA74784552 rs555240005 |
714 | Q>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
CA74784555 rs555240005 |
714 | Q>P | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
rs780574844 CA2446224 |
717 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1029055806 CA74784540 |
719 | D>Y | No |
ClinGen TOPMed gnomAD |
|
CA353143636 rs1287275608 |
723 | S>T | No |
ClinGen gnomAD |
|
CA74784536 rs997538234 |
726 | D>E | No |
ClinGen TOPMed |
|
CA353143556 rs1340866904 |
726 | D>G | No |
ClinGen TOPMed |
|
rs756388208 CA2446223 |
727 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446222 rs143988179 |
728 | P>A | No |
ClinGen ESP ExAC gnomAD |
|
CA2446221 rs144511046 |
728 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA353143458 rs1396774408 |
730 | A>S | No |
ClinGen gnomAD |
|
TCGA novel | 732 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA353143408 rs1427650718 |
733 | V>A | No |
ClinGen TOPMed gnomAD |
|
rs1323896136 CA353143357 |
735 | E>A | No |
ClinGen gnomAD |
|
rs1262125184 CA353143322 |
736 | F>S | No |
ClinGen TOPMed gnomAD |
|
CA2446218 rs764243996 |
737 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs368976533 CA2446217 |
739 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
COSM1047129 CA2446215 rs765240952 |
740 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs752642184 CA2446216 |
740 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA2446211 rs760299908 COSM191346 |
743 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs770689317 COSM1047127 CA2446212 |
743 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA2446210 rs772895170 |
744 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs771533062 CA2446209 |
749 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs747683504 CA2446208 |
750 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs761492968 CA74784438 |
751 | K>Q | No |
ClinGen Ensembl |
|
CA353143052 rs1339441586 |
751 | K>R | No |
ClinGen TOPMed |
|
CA353142980 rs1199852192 |
754 | E>G | No |
ClinGen TOPMed |
|
rs780371568 CA2446207 |
757 | E>D | No |
ClinGen ExAC gnomAD |
|
CA74784434 rs141982103 |
757 | E>K | No |
ClinGen ESP TOPMed |
|
rs529984671 CA74784424 |
759 | I>M | No |
ClinGen gnomAD |
|
CA2446206 rs770335878 |
760 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446205 rs746425255 |
763 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446203 rs146157054 |
763 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs372005398 CA2446204 |
763 | E>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA74784411 rs938351710 |
765 | P>R | No |
ClinGen TOPMed |
|
CA353142540 rs1185380331 |
765 | P>S | No |
ClinGen gnomAD |
|
rs1185380331 CA353142546 |
765 | P>T | No |
ClinGen gnomAD |
|
TCGA novel | 766 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
COSM1538446 rs747398738 CA2446177 |
768 | I>T | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs758697945 CA2446175 |
769 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446174 rs748377374 |
770 | P>A | No |
ClinGen ExAC gnomAD |
|
CA353141386 rs1406923279 |
772 | S>Y | No |
ClinGen gnomAD |
|
CA2446173 rs143790506 |
774 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1157662255 CA353141295 |
775 | I>T | No |
ClinGen gnomAD |
|
VAR_040921 | 777 | R>K | a colorectal adenocarcinoma sample; somatic mutation [UniProt] | No | UniProt |
TCGA novel | 779 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA353141215 rs1313785351 |
779 | V>I | No |
ClinGen TOPMed |
|
rs1180980069 CA353141125 |
781 | V>I | No |
ClinGen gnomAD |
|
rs907947419 CA74783256 |
784 | T>A | No |
ClinGen TOPMed |
|
rs766251863 CA2446170 |
788 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
CA2446168 rs138000848 |
788 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA2446169 rs138000848 |
788 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1290802641 CA353140741 |
793 | Q>E | No |
ClinGen gnomAD |
|
rs761438028 CA2446166 |
794 | L>F | No |
ClinGen ExAC gnomAD |
|
rs773921891 CA2446165 |
797 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs763625346 CA2446164 CA353140493 |
798 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA74783190 rs938022483 |
800 | D>G | No |
ClinGen TOPMed |
|
CA353140369 rs1241040170 |
801 | L>V | No |
ClinGen gnomAD |
|
rs777145290 CA2446162 |
803 | E>A | No |
ClinGen ExAC gnomAD |
|
CA353140258 rs777145290 |
803 | E>G | No |
ClinGen ExAC gnomAD |
|
CA353140234 rs1350273977 |
805 | E>D | No |
ClinGen gnomAD |
|
rs771579155 CA2446161 |
806 | D>G | No |
ClinGen ExAC gnomAD |
|
rs1471829055 CA353140141 |
808 | F>V | No |
ClinGen TOPMed |
|
CA2446159 rs747310804 |
809 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353140092 rs1362136069 |
809 | D>H | No |
ClinGen gnomAD |
|
CA353140088 rs747310804 |
809 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA353140046 rs1465554281 |
810 | R>T | No |
ClinGen TOPMed |
|
CA2446157 rs752678988 |
811 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1399302929 CA353175822 |
812 | V>A | No |
ClinGen TOPMed |
|
rs187332751 CA2446120 |
813 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA353175808 rs187332751 |
813 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs182485847 CA2446118 |
813 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA353175729 rs141150064 |
815 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs141150064 CA2446116 COSM1424567 |
815 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
CA2446117 rs534275346 |
815 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1380694752 CA353175636 |
818 | M>V | No |
ClinGen gnomAD |
|
rs750912632 CA2446114 |
822 | Y>C | No |
ClinGen ExAC gnomAD |
|
rs768155503 CA2446113 |
824 | T>N | No |
ClinGen ExAC gnomAD |
|
TCGA novel CA908130768 rs1206639612 |
825 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen TOPMed NCI-TCGA |
rs1228358452 CA353175231 |
826 | S>I | No |
ClinGen TOPMed gnomAD |
|
rs1228358452 CA353175233 |
826 | S>T | No |
ClinGen TOPMed gnomAD |
|
CA353175215 rs1298045184 |
827 | V>M | No |
ClinGen gnomAD |
|
COSM1424566 rs56168225 CA2446112 |
830 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
rs56168225 CA74797881 |
830 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs769126890 COSM731045 CA2446110 |
830 | R>H | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs769126890 CA2446111 |
830 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA74797876 rs763564376 COSM3824352 |
832 | L>F | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
TCGA novel | 834 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 836 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1553913836 CA353174260 |
838 | N>D | No |
ClinGen Ensembl |
|
CA2446108 rs775725277 |
838 | N>T | No |
ClinGen ExAC gnomAD |
|
COSM1047125 rs1578608281 CA353174194 |
839 | M>I | endometrium [Cosmic] | No |
ClinGen cosmic curated Ensembl |
rs142633896 CA353174221 |
839 | M>K | No |
ClinGen ESP gnomAD |
|
CA74797874 rs917607676 |
839 | M>L | No |
ClinGen Ensembl |
|
rs142633896 CA74797869 |
839 | M>T | No |
ClinGen ESP gnomAD |
|
CA2446107 rs769822247 |
840 | N>T | No |
ClinGen ExAC gnomAD |
|
CA2446106 rs745966590 |
841 | F>C | No |
ClinGen ExAC gnomAD |
|
CA2446104 rs770777005 |
842 | F>C | No |
ClinGen ExAC gnomAD |
|
CA2446105 rs781049128 |
842 | F>G | No |
ClinGen ExAC gnomAD |
No associated diseases with P51957
Functions
Description | ||
---|---|---|
EC Number | 2.7.11.1 | Protein-serine/threonine kinases |
Subcellular Localization |
|
|
PANTHER Family | ||
PANTHER Subfamily | ||
PANTHER Protein Class | ||
PANTHER Pathway Category | No pathway information available |
3 GO annotations of cellular component
Name | Definition |
---|---|
cilium | A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body. |
cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
4 GO annotations of molecular function
Name | Definition |
---|---|
ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
manganese ion binding | Binding to a manganese ion (Mn). |
protein serine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate. |
protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. |
7 GO annotations of biological process
Name | Definition |
---|---|
cell division | The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. |
cellular response to DNA damage stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. |
mitotic cell cycle | Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent. |
positive regulation of DNA-templated transcription | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
protein phosphorylation | The process of introducing a phosphate group on to a protein. |
regulation of cellular senescence | Any process that modulates the frequency, rate or extent of cellular senescence. |
regulation of response to DNA damage stimulus | Any process that modulates the frequency, rate or extent of response to DNA damage stimulus. |
15 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q6P3R8 | NEK5 | Serine/threonine-protein kinase Nek5 | Homo sapiens (Human) | PR |
Q8NE28 | STKLD1 | Serine/threonine kinase-like domain-containing protein STKLD1 | Homo sapiens (Human) | PR |
Q9Y3S1 | WNK2 | Serine/threonine-protein kinase WNK2 | Homo sapiens (Human) | SS |
Q9UHY1 | NRBP1 | Nuclear receptor-binding protein | Homo sapiens (Human) | PR |
Q9H4A3 | WNK1 | Serine/threonine-protein kinase WNK1 | Homo sapiens (Human) | SS |
Q9BYP7 | WNK3 | Serine/threonine-protein kinase WNK3 | Homo sapiens (Human) | SS |
Q9Y2U5 | MAP3K2 | Mitogen-activated protein kinase kinase kinase 2 | Homo sapiens (Human) | PR |
Q99759 | MAP3K3 | Mitogen-activated protein kinase kinase kinase 3 | Homo sapiens (Human) | PR |
Q8K1R7 | Nek9 | Serine/threonine-protein kinase Nek9 | Mus musculus (Mouse) | SS |
Q7TSC3 | Nek5 | Serine/threonine-protein kinase Nek5 | Mus musculus (Mouse) | PR |
Q10GB1 | NEK1 | Serine/threonine-protein kinase Nek1 | Oryza sativa subsp japonica (Rice) | PR |
Q6ZEZ5 | NEK3 | Serine/threonine-protein kinase Nek3 | Oryza sativa subsp japonica (Rice) | PR |
Q8RXT4 | NEK4 | Serine/threonine-protein kinase Nek4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
Q9LT35 | NEK6 | Serine/threonine-protein kinase Nek6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
Q9SLI2 | NEK1 | Serine/threonine-protein kinase Nek1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
10 | 20 | 30 | 40 | 50 | 60 |
MPLAAYCYLR | VVGKGSYGEV | TLVKHRRDGK | QYVIKKLNLR | NASSRERRAA | EQEAQLLSQL |
70 | 80 | 90 | 100 | 110 | 120 |
KHPNIVTYKE | SWEGGDGLLY | IVMGFCEGGD | LYRKLKEQKG | QLLPENQVVE | WFVQIAMALQ |
130 | 140 | 150 | 160 | 170 | 180 |
YLHEKHILHR | DLKTQNVFLT | RTNIIKVGDL | GIARVLENHC | DMASTLIGTP | YYMSPELFSN |
190 | 200 | 210 | 220 | 230 | 240 |
KPYNYKSDVW | ALGCCVYEMA | TLKHAFNAKD | MNSLVYRIIE | GKLPPMPRDY | SPELAELIRT |
250 | 260 | 270 | 280 | 290 | 300 |
MLSKRPEERP | SVRSILRQPY | IKRQISFFLE | ATKIKTSKNN | IKNGDSQSKP | FATVVSGEAE |
310 | 320 | 330 | 340 | 350 | 360 |
SNHEVIHPQP | LSSEGSQTYI | MGEGKCLSQE | KPRASGLLKS | PASLKAHTCK | QDLSNTTELA |
370 | 380 | 390 | 400 | 410 | 420 |
TISSVNIDIL | PAKGRDSVSD | GFVQENQPRY | LDASNELGGI | CSISQVEEEM | LQDNTKSSAQ |
430 | 440 | 450 | 460 | 470 | 480 |
PENLIPMWSS | DIVTGEKNEP | VKPLQPLIKE | QKPKDQSLAL | SPKLECSGTI | LAHSNLRLLG |
490 | 500 | 510 | 520 | 530 | 540 |
SSDSPASASR | VAGITGVCHH | AQDQVAGECI | IEKQGRIHPD | LQPHNSGSEP | SLSRQRRQKR |
550 | 560 | 570 | 580 | 590 | 600 |
REQTEHRGEK | RQVRRDLFAF | QESPPRFLPS | HPIVGKVDVT | STQKEAENQR | RVVTGSVSSS |
610 | 620 | 630 | 640 | 650 | 660 |
RSSEMSSSKD | RPLSARERRR | LKQSQEEMSS | SGPSVRKASL | SVAGPGKPQE | EDQPLPARRL |
670 | 680 | 690 | 700 | 710 | 720 |
SSDCSVTQER | KQIHCLSEDE | LSSSTSSTDK | SDGDYGEGKG | QTNEINALVQ | LMTQTLKLDS |
730 | 740 | 750 | 760 | 770 | 780 |
KESCEDVPVA | NPVSEFKLHR | KYRDTLILHG | KVAEEAEEIH | FKELPSAIMP | GSEKIRRLVE |
790 | 800 | 810 | 820 | 830 | 840 |
VLRTDVIRGL | GVQLLEQVYD | LLEEEDEFDR | EVRLREHMGE | KYTTYSVKAR | QLKFFEENMN |
F |