Descriptions

Calcium-dependent, calmodulin-stimulated protein phosphatase (PPP3CC) plays a role in the transduction of intracellular Ca2+-dependent signals in various cellular processes. This protein contains a novel autoinhibitory segment (AIS) in addition to the well-known autoinhibitory domain (AID). AIS and AID cooperatively inhibit enzyme activity.

Autoinhibitory domains (AIDs)

Target domain

93-293 (Calcineurin-like phosphoesterase domain)

Relief mechanism

Partner binding

Assay

Target domain

93-293 (Calcineurin-like phosphoesterase domain)

Relief mechanism

Partner binding

Assay

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

2 structures for P48454

Entry ID Method Resolution Chain Position Source
7U0T X-ray 245 A A 333-368 PDB
AF-P48454-F1 Predicted AlphaFoldDB

367 variants for P48454

Variant ID(s) Position Change Description Diseaes Association Provenance
RCV000678667
rs1563790727
CA370539328
400 M>T Keratoconus [ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
TCGA novel 1 M>? Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA370540278
rs1207967502
2 S>Y No ClinGen
TOPMed
gnomAD
CA4667639
CA370540281
rs767818391
COSM296855
3 G>R Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
NCI-TCGA
CA173894924
rs559908748
5 R>C No ClinGen
1000Genomes
gnomAD
CA4667640
rs373289771
5 R>H No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs1478627773
CA370540311
7 H>Q No ClinGen
TOPMed
gnomAD
rs760753352
CA4667641
8 L>F No ClinGen
ExAC
TOPMed
gnomAD
CA4667642
rs764089381
8 L>H No ClinGen
ExAC
gnomAD
CA173894970
rs868229086
9 S>Y No ClinGen
Ensembl
rs1360316239
CA370540327
10 T>I No ClinGen
gnomAD
rs1205875826
CA370540329
11 T>A No ClinGen
TOPMed
CA4667644
rs762468493
11 T>S No ClinGen
ExAC
TOPMed
gnomAD
rs750859445
CA4667646
12 D>N No ClinGen
ExAC
gnomAD
rs758721740
CA4667647
13 R>C No ClinGen
ExAC
gnomAD
rs758721740
CA370540341
13 R>G No ClinGen
ExAC
gnomAD
CA370540340
rs758721740
13 R>S No ClinGen
ExAC
gnomAD
rs1563656012
CA370540352
15 I>V No ClinGen
Ensembl
CA370540368
rs1344655771
17 A>P No ClinGen
gnomAD
rs146104346
CA4667663
19 P>A No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs776901296
CA370533810
19 P>H No ClinGen
ExAC
TOPMed
gnomAD
rs776901296
CA4667664
19 P>R No ClinGen
ExAC
TOPMed
gnomAD
COSM3735318
rs146104346
CA370533809
19 P>S skin [Cosmic] No ClinGen
cosmic curated
ESP
ExAC
TOPMed
gnomAD
rs1269517990
CA370533814
20 F>V No ClinGen
TOPMed
CA370533833
rs1177331745
23 T>A No ClinGen
gnomAD
rs1228506637
CA370533836
23 T>I No ClinGen
TOPMed
CA4667666
rs138834215
25 R>Q Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
CA4667665
rs371119915
25 R>W Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
rs1163074375
CA370533857
27 T>S No ClinGen
gnomAD
CA4667668
rs763316735
29 K>R No ClinGen
ExAC
gnomAD
CA370533881
rs1320131635
30 E>D No ClinGen
TOPMed
rs766657020
CA4667669
30 E>V No ClinGen
ExAC
TOPMed
gnomAD
TCGA novel 33 E>G Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1464974815
COSM1313924
CA370533898
33 E>Q Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
NCI-TCGA
gnomAD
CA370533923
rs1329219619
34 N>S No ClinGen
gnomAD
rs755776313
CA4667671
39 V>A No ClinGen
ExAC
gnomAD
rs530288872
CA4667672
40 D>E No ClinGen
1000Genomes
ExAC
gnomAD
rs756788817
CA4667674
41 V>A No ClinGen
ExAC
TOPMed
gnomAD
rs753384106
CA4667673
41 V>I No ClinGen
ExAC
gnomAD
CA4667675
rs146307937
RCV000913457
43 K>Q No ClinGen
ClinVar
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
CA370534072
rs1461004916
44 N>I No ClinGen
TOPMed
TCGA novel 44 N>K Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
TCGA novel 44 N>S Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
TCGA novel 44 N>T Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs745800385
CA370534087
45 H>P No ClinGen
ExAC
gnomAD
rs1365188184
CA370534091
45 H>Q No ClinGen
gnomAD
rs745800385
CA4667676
45 H>R No ClinGen
ExAC
gnomAD
CA370534115
rs1197222442
47 V>A No ClinGen
gnomAD
CA4667678
COSM163693
rs771899958
51 R>* breast [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
CA370534173
rs1365012058
51 R>Q Variant assessed as Somatic; impact. [NCI-TCGA] No ClinGen
NCI-TCGA
TOPMed
CA4667679
rs560532505
52 L>V No ClinGen
1000Genomes
ExAC
gnomAD
rs201270011
CA370534189
53 E>K No ClinGen
1000Genomes
TOPMed
rs201270011
CA173870814
53 E>Q No ClinGen
1000Genomes
TOPMed
rs761936868
CA4667683
56 V>A No ClinGen
ExAC
TOPMed
gnomAD
CA4667682
rs777026325
56 V>I No ClinGen
ExAC
TOPMed
gnomAD
rs770006457
CA4667684
57 A>T No ClinGen
ExAC
gnomAD
TCGA novel 58 L>V Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA370534246
rs1332872876
60 I>V No ClinGen
TOPMed
gnomAD
rs201924888
CA173870874
64 G>A No ClinGen
Ensembl
CA173870876
rs894194265
65 A>S No ClinGen
Ensembl
TCGA novel 69 R>S Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs766751572
CA4667687
71 E>V No ClinGen
ExAC
gnomAD
rs774623986
CA4667688
72 K>N No ClinGen
ExAC
gnomAD
CA580951488
rs1217165830
73 T>* No ClinGen
gnomAD
CA4667689
rs200358456
74 M>V No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA4667690
rs763694932
77 V>I No ClinGen
ExAC
gnomAD
CA370534656
rs1200411153
78 D>H No ClinGen
gnomAD
rs753508772
CA4667691
79 A>P No ClinGen
ExAC
gnomAD
rs756693360
CA4667692
79 A>V No ClinGen
ExAC
gnomAD
rs1210980545
CA370534718
81 I>L No ClinGen
TOPMed
gnomAD
rs1210980545
CA370534720
81 I>V No ClinGen
TOPMed
gnomAD
rs142254973 83 V>= Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No NCI-TCGA
rs1478993420
CA370534896
84 C>F No ClinGen
gnomAD
CA370534984
rs1172618340
88 H>N No ClinGen
gnomAD
CA4667708
rs759842345
88 H>R No ClinGen
ExAC
gnomAD
CA4667709
rs767875233
89 G>R No ClinGen
ExAC
gnomAD
CA4667710
rs776263969
90 Q>L No ClinGen
ExAC
gnomAD
COSM1098102
rs558510846
CA4667712
91 F>L Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
1000Genomes
ExAC
NCI-TCGA
TOPMed
gnomAD
CA4667713
rs150347888
92 F>L No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA370535074
rs1586811611
92 F>Y No ClinGen
Ensembl
CA370535115
rs1322027924
93 D>E No ClinGen
gnomAD
CA173871242
rs1048128164
95 M>I No ClinGen
Ensembl
CA173871254
rs1023915044
96 K>R No ClinGen
TOPMed
gnomAD
rs757957809
CA4667714
98 F>L No ClinGen
ExAC
gnomAD
rs1208095509
CA370535311
103 S>T No ClinGen
gnomAD
rs1266363665
CA370535367
105 S>G No ClinGen
TOPMed
rs1563709966
CA370535403
106 N>Y No ClinGen
Ensembl
CA370535445
rs1330362107
107 T>A No ClinGen
TOPMed
rs201508276
CA4667717
108 R>C No ClinGen
ExAC
TOPMed
gnomAD
CA370535475
rs1265047172
108 R>L No ClinGen
gnomAD
rs1236964499
CA370535484
109 Y>C No ClinGen
gnomAD
CA4667719
rs781199265
109 Y>H No ClinGen
ExAC
gnomAD
CA370535496
rs1381878020
110 L>V No ClinGen
TOPMed
rs748367526
CA4667720
111 F>L No ClinGen
ExAC
gnomAD
CA4667721
rs201693564
111 F>S No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs149478416
CA173871304
113 G>A No ClinGen
ESP
TOPMed
rs1457119483
CA370535568
115 Y>C No ClinGen
gnomAD
rs1406391775
CA370535666
122 S>T No ClinGen
gnomAD
CA370539694
rs1297290684
125 C>Y Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
rs1220305880
CA370539734
128 Y>C No ClinGen
gnomAD
rs1338151709
CA370539727
128 Y>H No ClinGen
gnomAD
TCGA novel 129 L>V Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
TCGA novel 134 I>M Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs759515600
CA4667757
140 L>S No ClinGen
ExAC
gnomAD
rs767517685
CA4667758
141 F>L No ClinGen
ExAC
gnomAD
TCGA novel 144 R>L Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs763951398
CA4667761
144 R>Q No ClinGen
ExAC
gnomAD
COSM1221817
CA4667760
rs760326256
144 R>W Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
NCI-TCGA
gnomAD
CA370539984
rs1489474556
145 G>R No ClinGen
gnomAD
rs767126681
CA173889769
147 H>N No ClinGen
Ensembl
rs753995074
CA4667762
147 H>P No ClinGen
ExAC
gnomAD
CA173889785
rs867396857
149 C>F No ClinGen
Ensembl
rs1267231596
CA370540047
149 C>R No ClinGen
gnomAD
rs1178259768
CA370540144
159 K>R No ClinGen
gnomAD
CA4667784
rs750657661
COSM183176
163 R>* Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ExAC
NCI-TCGA
TOPMed
gnomAD
rs750657661
CA173899572
163 R>G No ClinGen
ExAC
TOPMed
gnomAD
rs61756434
CA4667785
COSM167175
163 R>Q large_intestine [Cosmic] No ClinGen
cosmic curated
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs549332380
CA173899595
167 S>L Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
rs376449000
CA4667788
168 E>K No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA4667789
rs376449000
168 E>Q No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs748505175
CA4667790
170 V>M No ClinGen
ExAC
gnomAD
rs1196783532
CA370542006
171 Y>C Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
rs1240129734
CA370542048
173 A>S No ClinGen
gnomAD
rs1470602375
CA370542063
174 C>R No ClinGen
gnomAD
COSM1623858
rs778647833
CA4667792
CA4667793
175 M>I liver [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
TCGA novel 176 E>K Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1411984211
CA370542134
177 T>A No ClinGen
gnomAD
CA4667794
rs771701961
180 C>S No ClinGen
ExAC
gnomAD
rs1460829300
CA370542270
183 L>P No ClinGen
TOPMed
rs1395072241
CA370542280
184 A>D No ClinGen
gnomAD
rs547496630
CA173899663
185 A>V No ClinGen
1000Genomes
CA173899676
rs998887073
190 Q>K No ClinGen
TOPMed
rs1328612960
CA370542425
194 V>L No ClinGen
gnomAD
rs1355772852
CA370542433
195 H>R No ClinGen
gnomAD
rs1442386624
CA370542441
196 G>A No ClinGen
gnomAD
rs746893360
CA4667797
198 M>V No ClinGen
ExAC
gnomAD
rs1376577299
CA370542458
199 S>P No ClinGen
gnomAD
rs768601864
CA4667798
200 P>A No ClinGen
ExAC
gnomAD
CA370542490
rs1462576003
204 S>P No ClinGen
gnomAD
TCGA novel 204 S>Y Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs569319692
CA173899723
207 D>G No ClinGen
Ensembl
CA173899736
rs758661293
208 I>V No ClinGen
TOPMed
gnomAD
rs908862200
CA173901305
212 D>N No ClinGen
TOPMed
gnomAD
TCGA novel 214 F>Y Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs748154020
CA4667821
215 T>M Variant assessed as Somatic; 0.0002781 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
TOPMed
gnomAD
rs763127542
CA4667824
217 P>L No ClinGen
ExAC
gnomAD
CA4667823
rs773037392
217 P>T No ClinGen
ExAC
TOPMed
gnomAD
COSM241237
rs201570071
CA4667826
219 A>T prostate [Cosmic] No ClinGen
cosmic curated
ESP
ExAC
TOPMed
gnomAD
rs370906756
CA4667827
220 F>V No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA4667828
rs767498113
222 P>S No ClinGen
ExAC
TOPMed
gnomAD
CA370542861
rs1346495084
223 V>A No ClinGen
TOPMed
CA370542875
rs1303380694
224 C>Y No ClinGen
TOPMed
CA4667830
rs761321350
226 L>M No ClinGen
ExAC
TOPMed
gnomAD
TCGA novel 227 L>R Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1285551091
CA370542911
227 L>V No ClinGen
gnomAD
rs1231290289
CA370542950
229 S>C No ClinGen
Ensembl
rs764524113
CA4667831
231 P>L No ClinGen
ExAC
gnomAD
CA370542993
rs1203116207
232 S>L No ClinGen
gnomAD
CA173901397
rs372425364
234 D>A No ClinGen
ESP
CA4667833
rs757719598
234 D>H No ClinGen
ExAC
gnomAD
rs1336470373
CA370543067
237 N>S No ClinGen
TOPMed
gnomAD
COSM223239
CA4667835
rs199697260
240 T>I skin [Cosmic] No ClinGen
cosmic curated
1000Genomes
ExAC
TOPMed
gnomAD
CA370543095
rs199697260
240 T>S No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA370543109
rs780627360
242 E>D No ClinGen
ExAC
TOPMed
gnomAD
rs1482939004
CA370543119
243 H>R No ClinGen
TOPMed
CA173901418
rs889170062
243 H>Y Variant assessed as Somatic; impact. [NCI-TCGA] No ClinGen
Ensembl
NCI-TCGA
CA4667838
rs748058050
245 T>I No ClinGen
ExAC
gnomAD
rs748058050
CA4667839
245 T>S No ClinGen
ExAC
gnomAD
rs1212770436
CA370543155
246 H>D No ClinGen
TOPMed
rs777715654
CA4667840
247 N>K No ClinGen
ExAC
TOPMed
gnomAD
rs573613943
CA4667841
248 T>A No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs1322127908
CA370543197
248 T>I No ClinGen
TOPMed
gnomAD
rs1322127908
CA370543195
248 T>S No ClinGen
TOPMed
gnomAD
rs1397382342
CA370543207
249 V>A No ClinGen
gnomAD
CA173901432
rs771564562
250 R>* No ClinGen
Ensembl
rs142268010
COSM1456098
CA4667842
250 R>Q Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
ESP
ExAC
NCI-TCGA
TOPMed
gnomAD
CA4667843
rs774565998
251 G>V No ClinGen
ExAC
gnomAD
rs772177597
CA4667845
256 Y>C No ClinGen
ExAC
gnomAD
rs1463178084
CA370535324
259 P>S No ClinGen
TOPMed
gnomAD
CA370535317
rs1463178084
259 P>T No ClinGen
TOPMed
gnomAD
CA370535350
rs1186195766
260 A>E No ClinGen
gnomAD
CA370535339
rs1165960402
260 A>T No ClinGen
TOPMed
gnomAD
CA4667862
rs772146715
262 C>G No ClinGen
ExAC
TOPMed
gnomAD
CA4667863
rs375938980
262 C>Y No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA370535430
rs1170587333
263 E>D No ClinGen
gnomAD
CA173847550
rs867311787
266 Q>H No ClinGen
gnomAD
CA4667864
rs892898169
266 Q>K No ClinGen
gnomAD
rs747028980
CA4667866
267 N>K No ClinGen
ExAC
TOPMed
gnomAD
rs768862245
CA4667867
268 N>S No ClinGen
ExAC
gnomAD
CA370535532
rs1290484802
269 N>D No ClinGen
gnomAD
CA370535565
rs1586860886
271 L>P No ClinGen
Ensembl
rs1362560168
CA370535573
272 S>P No ClinGen
TOPMed
gnomAD
rs1020359373
CA370535584
273 I>F No ClinGen
TOPMed
gnomAD
rs1020359373
CA173847596
273 I>V No ClinGen
TOPMed
gnomAD
rs762288064
CA4667869
274 I>M No ClinGen
ExAC
gnomAD
CA4667868
rs777277595
274 I>V No ClinGen
ExAC
gnomAD
rs971122400
CA173847601
275 R>G No ClinGen
Ensembl
rs200592618
CA173847607
275 R>T No ClinGen
Ensembl
CA4667870
rs765615628
276 A>T No ClinGen
ExAC
TOPMed
gnomAD
CA173847620
rs946725941
276 A>V No ClinGen
TOPMed
CA4667871
rs773492466
277 H>R No ClinGen
ExAC
gnomAD
CA370535698
rs1563775981
282 A>T No ClinGen
Ensembl
rs1259361791
COSM183178
CA370535774
285 R>* large_intestine skin [Cosmic] No ClinGen
cosmic curated
TOPMed
gnomAD
CA370535772
rs1259361791
285 R>G No ClinGen
TOPMed
gnomAD
rs760377688
CA4667892
285 R>Q No ClinGen
ExAC
TOPMed
gnomAD
CA4667893
rs77847127
291 Q>K No ClinGen
ExAC
gnomAD
CA4667894
rs753327372
292 A>D No ClinGen
ExAC
gnomAD
CA173847808
rs912550463
293 T>I No ClinGen
Ensembl
CA370535894
rs1195618473
295 F>C No ClinGen
gnomAD
rs761410513
CA4667895
297 S>L No ClinGen
ExAC
gnomAD
rs1216572710
CA370535914
299 I>L No ClinGen
TOPMed
gnomAD
CA370535918
rs1439339609
299 I>T No ClinGen
gnomAD
rs765027970
CA4667896
301 I>V No ClinGen
ExAC
TOPMed
gnomAD
CA370535946
rs1290521748
303 S>F No ClinGen
TOPMed
TCGA novel 303 S>F Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1343219946
CA370535942
303 S>P No ClinGen
gnomAD
CA370535947
rs1455214447
304 A>T No ClinGen
gnomAD
rs750379620
CA4667897
305 P>R No ClinGen
ExAC
gnomAD
rs758124603
CA4667898
306 N>S No ClinGen
ExAC
gnomAD
rs1563776363
CA370535982
309 D>V No ClinGen
Ensembl
CA4667899
rs780057706
312 N>S No ClinGen
ExAC
gnomAD
rs1371217828
CA370536046
313 N>T No ClinGen
gnomAD
rs1410101413
CA370536727
315 A>V No ClinGen
gnomAD
CA370536764
rs1586866818
318 L>W No ClinGen
Ensembl
rs1373280514
CA370536792
320 Y>N No ClinGen
gnomAD
rs769168438
CA4667932
323 N>D No ClinGen
ExAC
gnomAD
CA4667933
rs772823111
323 N>S No ClinGen
ExAC
TOPMed
gnomAD
rs139704293
CA4667934
325 M>I No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs766372929
CA4667935
327 I>V No ClinGen
ExAC
TOPMed
gnomAD
CA370537051
rs1233742011
328 R>S No ClinGen
gnomAD
rs1301480215
CA370537065
330 F>C No ClinGen
gnomAD
CA370537079
rs1350356330
332 C>Y No ClinGen
gnomAD
CA173851969
rs926267034
335 H>Y No ClinGen
gnomAD
CA173851985
rs369427673
337 Y>C No ClinGen
TOPMed
gnomAD
CA370537127
rs1446299374
339 L>V No ClinGen
gnomAD
rs1179504402
CA370537131
340 P>T No ClinGen
TOPMed
rs1225165453
CA370537138
341 N>D No ClinGen
TOPMed
gnomAD
CA4667937
rs201865784
342 F>Y No ClinGen
1000Genomes
ExAC
gnomAD
CA4667938
rs767409383
343 M>T No ClinGen
ExAC
gnomAD
rs1251955049
CA370537196
345 V>I No ClinGen
TOPMed
rs1192518186
CA370537230
347 T>A No ClinGen
TOPMed
gnomAD
rs1192518186
CA370537228
347 T>P No ClinGen
TOPMed
gnomAD
rs1455330060
CA370537329
353 V>A No ClinGen
gnomAD
rs373349687
CA173852013
353 V>I No ClinGen
ESP
TOPMed
gnomAD
CA370537341
rs1384713539
354 G>E No ClinGen
gnomAD
TCGA novel 355 E>K Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs1230328740
CA370537553
359 E>D No ClinGen
TOPMed
rs1266407886
CA370537546
359 E>K No ClinGen
TOPMed
rs750908882
CA4667965
360 M>L No ClinGen
ExAC
gnomAD
CA370537582
rs1184347581
362 V>I No ClinGen
gnomAD
rs779217504
CA4667966
364 V>* No ClinGen
ExAC
gnomAD
CA4667967
rs758988316
365 L>P No ClinGen
ExAC
gnomAD
TCGA novel 366 N>K Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA370537646
rs1374435794
366 N>S No ClinGen
gnomAD
rs780461537
CA4667968
367 I>V No ClinGen
ExAC
gnomAD
CA4667969
rs151088445
368 C>R No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs755314392
CA4667970
368 C>S No ClinGen
ExAC
gnomAD
CA370537681
rs1563785535
368 C>W No ClinGen
Ensembl
CA370537690
rs1394552944
369 S>C No ClinGen
gnomAD
rs777498246
CA4667971
370 D>N No ClinGen
ExAC
gnomAD
rs1330570515
CA370537708
370 D>V No ClinGen
gnomAD
rs545910337
CA4667973
371 D>E No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA4667972
rs749013514
371 D>G No ClinGen
ExAC
gnomAD
rs139802616
CA4667974
372 E>K No ClinGen
ESP
ExAC
gnomAD
rs772006030
CA4667976
374 I>F No ClinGen
ExAC
gnomAD
CA370537810
rs1336983511
377 D>E No ClinGen
gnomAD
CA370537796
rs1250277145
377 D>H No ClinGen
gnomAD
CA4667980
rs768404099
380 E>D No ClinGen
ExAC
gnomAD
CA4667997
rs745331553
383 T>S No ClinGen
ExAC
gnomAD
rs1586872140
CA370539095
384 T>A No ClinGen
Ensembl
CA4667998
rs142649874
385 V>I No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA4667999
rs780038020
386 R>C No ClinGen
ExAC
TOPMed
gnomAD
rs746979307
CA4668000
386 R>H Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
TOPMed
gnomAD
CA370539141
rs746979307
386 R>P No ClinGen
ExAC
TOPMed
gnomAD
rs1563790639
CA370539149
387 K>E No ClinGen
Ensembl
rs1438162902
CA370539194
388 E>D No ClinGen
gnomAD
CA370539217
rs1294888334
389 I>S No ClinGen
gnomAD
CA4668002
rs776450965
391 R>G No ClinGen
ExAC
TOPMed
gnomAD
CA4668003
rs761630899
392 N>Y No ClinGen
ExAC
gnomAD
CA4668004
rs769958673
396 A>T No ClinGen
ExAC
TOPMed
gnomAD
rs1319180393
CA370539308
397 I>T No ClinGen
gnomAD
TCGA novel 398 G>R Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA370539331
rs1229538371
400 M>I No ClinGen
gnomAD
rs773438529
CA4668006
402 R>G No ClinGen
ExAC
TOPMed
gnomAD
rs766431729
CA4668007
402 R>Q No ClinGen
ExAC
gnomAD
rs773438529
CA4668005
402 R>W No ClinGen
ExAC
TOPMed
gnomAD
TCGA novel 406 I>R Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
CA4668008
rs752089192
406 I>V No ClinGen
ExAC
TOPMed
gnomAD
rs267601853
CA173855603
408 R>Q Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
NCI-TCGA
gnomAD
rs147883306
CA4668009
COSM3395237
408 R>W lung pancreas [Cosmic] No ClinGen
cosmic curated
ESP
ExAC
TOPMed
gnomAD
rs776153935
CA4668028
411 S>G No ClinGen
ExAC
gnomAD
rs761053712
CA4668029
412 E>D No ClinGen
ExAC
gnomAD
CA4668030
rs141498030
414 V>M No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1273955345
CA370539432
415 L>M No ClinGen
TOPMed
rs758028713
CA4668032
417 L>V No ClinGen
ExAC
gnomAD
CA370539453
rs1434592828
418 K>T No ClinGen
TOPMed
CA173856145
rs767032990
419 G>V No ClinGen
gnomAD
CA4668033
rs766088656
423 T>I No ClinGen
ExAC
gnomAD
rs1586872877
CA370539490
425 T>A No ClinGen
Ensembl
rs750987648
CA4668034
425 T>I No ClinGen
ExAC
gnomAD
rs1205555981
CA370539513
429 G>C No ClinGen
gnomAD
rs777474578
CA4668039
430 V>I Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
TOPMed
gnomAD
rs371775394
CA4668041
433 G>E No ClinGen
ESP
ExAC
gnomAD
CA370539535
CA4668040
rs749492151
433 G>R No ClinGen
ExAC
gnomAD
rs1476388803
CA370539543
434 G>A No ClinGen
gnomAD
CA4668042
rs774654172
437 T>P No ClinGen
ExAC
gnomAD
CA173856188
rs774834878
438 I>V No ClinGen
gnomAD
CA4668045
rs375281540
439 E>K No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1393645611
CA370539579
440 T>A No ClinGen
gnomAD
rs112400329
CA173860901
441 A>D No ClinGen
Ensembl
rs181246968
CA4668064
445 A>V Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
1000Genomes
ExAC
NCI-TCGA
TOPMed
gnomAD
rs777212433
CA4668067
449 R>G No ClinGen
ExAC
TOPMed
gnomAD
rs757246804
CA4668068
449 R>Q No ClinGen
ExAC
TOPMed
gnomAD
rs777212433
CA4668066
449 R>W No ClinGen
ExAC
TOPMed
gnomAD
rs1270286713
CA370540456
451 A>V No ClinGen
TOPMed
rs1406188368
CA370540457
452 I>L No ClinGen
gnomAD
rs750644493
CA4668078
452 I>T No ClinGen
ExAC
CA370540458
rs1406188368
452 I>V No ClinGen
gnomAD
rs550192301
CA370540463
453 R>G No ClinGen
1000Genomes
TOPMed
gnomAD
rs994085569
CA173861805
455 F>L No ClinGen
Ensembl
rs568702309
COSM1098107
CA4668079
456 S>L Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
1000Genomes
ExAC
NCI-TCGA
gnomAD
rs1232108797
CA370540528
459 H>Q No ClinGen
gnomAD
CA370540524
rs1448632305
459 H>R No ClinGen
gnomAD
rs1351055651
CA370540518
459 H>Y No ClinGen
gnomAD
CA370540534
rs1263171282
460 K>E No ClinGen
gnomAD
rs748750606
CA4668084
460 K>N No ClinGen
ExAC
gnomAD
rs117993834
CA4668083
460 K>R No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA4668086
rs773602093
462 R>P No ClinGen
ExAC
TOPMed
gnomAD
CA4668087
rs773602093
462 R>Q No ClinGen
ExAC
TOPMed
gnomAD
rs547966380
CA4668085
462 R>W No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA4668089
rs148902526
463 S>G No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA4668090
rs267601854
463 S>N No ClinGen
ExAC
TOPMed
gnomAD
CA4668092
rs373005127
467 A>V No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA4668093
rs143566497
468 R>Q No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1563801119
CA370540652
469 G>R No ClinGen
Ensembl
rs1439514928
CA370540661
470 L>V No ClinGen
TOPMed
rs765296718
CA4668094
472 R>Q Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] No ClinGen
ExAC
NCI-TCGA
TOPMed
gnomAD
CA370540745
rs1200851914
476 R>Q No ClinGen
TOPMed
TCGA novel 477 M>I Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA
rs758283531
CA4668097
480 R>* No ClinGen
ExAC
TOPMed
CA370540814
rs1371017260
481 K>R No ClinGen
gnomAD
CA4668099
rs539933461
484 I>L No ClinGen
1000Genomes
ExAC
gnomAD
CA370540875
rs1342230435
484 I>T No ClinGen
TOPMed
CA370540889
rs1257726142
485 H>Y No ClinGen
TOPMed
rs558233561
CA370540912
486 A>S No ClinGen
1000Genomes
ExAC
gnomAD
COSM1569112
rs558233561
CA4668101
486 A>T Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] No ClinGen
cosmic curated
1000Genomes
ExAC
NCI-TCGA
gnomAD
CA173861942
rs760538011
487 G>S No ClinGen
gnomAD
CA370540938
rs1163020062
487 G>V No ClinGen
gnomAD
rs569926835
CA4668102
488 G>V No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA4668103
rs371144311
489 P>R No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs148030191
CA4668105
490 M>L No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1402909050
CA370540951
490 M>T No ClinGen
gnomAD
rs148030191
CA4668106
490 M>V No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1017999814
CA173861953
492 S>Y Variant assessed as Somatic; impact. [NCI-TCGA] No ClinGen
Ensembl
NCI-TCGA
CA4668108
rs746732880
493 V>I No ClinGen
ExAC
gnomAD
CA370540979
rs1443052955
494 T>I No ClinGen
gnomAD
rs1388508532
CA370541004
498 S>* No ClinGen
gnomAD
CA4668110
rs776167089
499 H>N No ClinGen
ExAC
gnomAD
rs761251789
CA4668111
500 A>V No ClinGen
ExAC
gnomAD
VAR_061758
rs28764007
CA4668112
501 A>V No ClinGen
UniProt
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
CA4668114
rs762840722
502 H>D No ClinGen
ExAC
gnomAD
rs1404299710
CA370541040
504 S>N No ClinGen
gnomAD
CA173862058
rs956938101
505 D>E No ClinGen
TOPMed
CA4668116
rs751714017
505 D>N No ClinGen
ExAC
gnomAD
CA4668117
rs755264247
507 G>R No ClinGen
ExAC
gnomAD
rs1180970556
CA370541083
510 A>D No ClinGen
TOPMed
TCGA novel 512 S>L Variant assessed as Somatic; impact. [NCI-TCGA] No NCI-TCGA

No associated diseases with P48454

8 regional properties for P48454

Type Name Position InterPro Accession
domain Protein kinase domain 500 - 785 IPR000719
domain S-locus glycoprotein domain 215 - 322 IPR000858
domain Serine-threonine/tyrosine-protein kinase, catalytic domain 502 - 764 IPR001245
domain Bulb-type lectin domain 33 - 183 IPR001480
domain PAN/Apple domain 343 - 425 IPR003609
active_site Serine/threonine-protein kinase, active site 621 - 633 IPR008271
binding_site Protein kinase, ATP binding site 506 - 528 IPR017441
domain S-locus receptor kinase, C-terminal 772 - 814 IPR021820

Functions

Description
EC Number 3.1.3.16 Phosphoric monoester hydrolases
Subcellular Localization
  • Mitochondrion
  • Localizes in the mitochondria in a SPATA33-dependent manner
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

7 GO annotations of cellular component

Name Definition
calcineurin complex A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin.
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
cytosol The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
glutamatergic synapse A synapse that uses glutamate as a neurotransmitter.
mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
presynapse The part of a synapse that is part of the presynaptic cell.
protein serine/threonine phosphatase complex A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein.

5 GO annotations of molecular function

Name Definition
calcium-dependent protein serine/threonine phosphatase activity Catalysis of the reactions: protein serine phosphate + H2O = protein serine + phosphate; and protein threonine phosphate + H2O = protein threonine + phosphate. These reactions require the presence of calcium ions.
calmodulin binding Binding to calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
calmodulin-dependent protein phosphatase activity Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate, dependent on the presence of calcium-bound calmodulin.
metal ion binding Binding to a metal ion.
myosin phosphatase activity Catalysis of the reaction: phosphomyosin + H2O = myosin + phosphate.

10 GO annotations of biological process

Name Definition
brain development The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
calcineurin-mediated signaling Any intracellular signal transduction in which the signal is passed on within the cell by activation of a transcription factor as a consequence of dephosphorylation by Ca(2+)-activated calcineurin. The process begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin is a calcium- and calmodulin-dependent serine/threonine protein phosphatase with a conserved function in eukaryotic species from yeast to humans. In yeast and fungi, calcineurin regulates stress signaling and cell cycle, and sporulation and virulence in pathogenic fungi. In metazoans, calcineurin is involved in cell commitment, organogenesis and organ development and immune function of T-lymphocytes. By a conserved mechanism, calcineurin phosphatase activates fungal Crz1 and mammalian NFATc by dephosphorylation and translocation of these transcription factors to the nucleus to regulate gene expression.
calcineurin-NFAT signaling cascade Any intracellular signal transduction in which the signal is passed on within the cell by activation of a member of the NFAT protein family as a consequence of NFAT dephosphorylation by Ca(2+)-activated calcineurin. The cascade begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin dephosphorylates multiple phosphoserine residues on NFAT, resulting in the translocation of NFAT to the nucleus. The cascade ends with regulation of transcription by NFAT. The calcineurin-NFAT cascade lies downstream of many cell surface receptors, including G protein-coupled receptors (GPCRs) and receptor tyrosine kinases (RTKs) that signal to mobilize calcium ions (Ca2+).
negative regulation of calcium ion import across plasma membrane Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion import across plasma membrane.
negative regulation of voltage-gated calcium channel activity Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated calcium channel activity.
positive regulation of calcineurin-NFAT signaling cascade Any process that activates or increases the frequency, rate or extent of signaling via the calcineurin-NFAT signaling cascade.
positive regulation of calcium ion import across plasma membrane Any process that activates or increases the frequency, rate or extent of calcium ion import across plasma membrane.
positive regulation of synaptic vesicle endocytosis Any process that activates or increases the frequency, rate or extent of synaptic vesicle endocytosis.
positive regulation of voltage-gated calcium channel activity Any process that activates or increases the frequency, rate or extent of voltage-gated calcium channel activity.
protein dephosphorylation The process of removing one or more phosphoric residues from a protein.

13 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
P23287 CNA1 Serine/threonine-protein phosphatase 2B catalytic subunit A1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) PR
P48452 PPP3CA Protein phosphatase 3 catalytic subunit alpha Bos taurus (Bovine) SS
Q27889 Pp2B-14D Serine/threonine-protein phosphatase 2B catalytic subunit 2 Drosophila melanogaster (Fruit fly) SS
P48456 CanA1 Serine/threonine-protein phosphatase 2B catalytic subunit 1 Drosophila melanogaster (Fruit fly) SS
Q9VXF1 CanA-14F Serine/threonine-protein phosphatase 2B catalytic subunit 3 Drosophila melanogaster (Fruit fly) SS
P16298 PPP3CB Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform Homo sapiens (Human) EV
Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform Homo sapiens (Human) EV
P48453 Ppp3cb Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform Mus musculus (Mouse) SS
P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform Mus musculus (Mouse) EV
P48455 Ppp3cc Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform Mus musculus (Mouse) PR
P20651 Ppp3cb Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform Rattus norvegicus (Rat) SS
P63329 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform Rattus norvegicus (Rat) SS
Q0G819 tax-6 Serine/threonine-protein phosphatase 2B catalytic subunit Caenorhabditis elegans SS
10 20 30 40 50 60
MSGRRFHLST TDRVIKAVPF PPTQRLTFKE VFENGKPKVD VLKNHLVKEG RLEEEVALKI
70 80 90 100 110 120
INDGAAILRQ EKTMIEVDAP ITVCGDIHGQ FFDLMKLFEV GGSPSNTRYL FLGDYVDRGY
130 140 150 160 170 180
FSIECVLYLW SLKINHPKTL FLLRGNHECR HLTDYFTFKQ ECRIKYSEQV YDACMETFDC
190 200 210 220 230 240
LPLAALLNQQ FLCVHGGMSP EITSLDDIRK LDRFTEPPAF GPVCDLLWSD PSEDYGNEKT
250 260 270 280 290 300
LEHYTHNTVR GCSYFYSYPA VCEFLQNNNL LSIIRAHEAQ DAGYRMYRKS QATGFPSLIT
310 320 330 340 350 360
IFSAPNYLDV YNNKAAVLKY ENNVMNIRQF NCSPHPYWLP NFMDVFTWSL PFVGEKVTEM
370 380 390 400 410 420
LVNVLNICSD DELISDDEAE GSTTVRKEII RNKIRAIGKM ARVFSILRQE SESVLTLKGL
430 440 450 460 470 480
TPTGTLPLGV LSGGKQTIET ATVEAVEARE AIRGFSLQHK IRSFEEARGL DRINERMPPR
490 500 510
KDSIHAGGPM KSVTSAHSHA AHRSDQGKKA HS