Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

1 structures for P47930

Entry ID Method Resolution Chain Position Source
AF-P47930-F1 Predicted AlphaFoldDB

22 variants for P47930

Variant ID(s) Position Change Description Diseaes Association Provenance
rs3388735360 20 P>R No EVA
rs3388759487 53 A>T No EVA
rs3388726506 72 M>I No EVA
rs3388749314 78 R>C No EVA
rs3388749349 83 S>I No EVA
rs3388749402 91 V>I No EVA
rs3388749729 102 V>M No EVA
rs3388752728 109 T>S No EVA
rs3388753029 113 R>G No EVA
rs3388759519 119 L>P No EVA
rs3395340343 122 E>K No EVA
rs3388749749 149 T>S No EVA
rs3388735363 166 L>V No EVA
rs3388738637 205 G>W No EVA
rs3388753036 276 G>S No EVA
rs3388752738 277 T>N No EVA
rs3388755621 279 N>I No EVA
rs3388753526 289 E>K No EVA
rs3395340304 294 S>* No EVA
rs13465639 294 S>A No EVA
rs3388752760 298 E>D No EVA
rs3394768659 302 K>RTLG* No EVA

No associated diseases with P47930

3 regional properties for P47930

Type Name Position InterPro Accession
domain W2 domain 720 - 904 IPR003307
domain MIF4G-like, type 3 78 - 308 IPR003890
domain Initiation factor eIF-4 gamma, MA3 543 - 666 IPR003891

Functions

Description
EC Number
Subcellular Localization
  • Nucleus
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

3 GO annotations of cellular component

Name Definition
nucleoplasm That part of the nuclear content other than the chromosomes or the nucleolus.
nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
RNA polymerase II transcription regulator complex A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase II.

10 GO annotations of molecular function

Name Definition
chromatin binding Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
DNA-binding transcription activator activity, RNA polymerase II-specific A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets transcribed by RNA polymerase II.
DNA-binding transcription factor activity A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
DNA-binding transcription factor activity, RNA polymerase II-specific A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II.
double-stranded DNA binding Binding to double-stranded DNA.
RNA polymerase II cis-regulatory region sequence-specific DNA binding Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II.
RNA polymerase II transcription regulatory region sequence-specific DNA binding Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
sequence-specific DNA binding Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
transcription cis-regulatory region binding Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.

8 GO annotations of biological process

Name Definition
keratinocyte development The process whose specific outcome is the progression of a keratinocyte over time, from its formation to the mature structure.
positive regulation of DNA-templated transcription Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
positive regulation of fibroblast proliferation Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells.
positive regulation of transcription by RNA polymerase II Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
regulation of transcription by RNA polymerase II Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
response to estradiol Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen.
response to hypoxia Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
transcription by RNA polymerase II The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).

8 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
O93602 ATF2 Cyclic AMP-dependent transcription factor ATF-2 Gallus gallus (Chicken) SS
P15336 ATF2 Cyclic AMP-dependent transcription factor ATF-2 Homo sapiens (Human) EV
Q02930 CREB5 Cyclic AMP-responsive element-binding protein 5 Homo sapiens (Human) SS
P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 Homo sapiens (Human) PR
P15408 FOSL2 Fos-related antigen 2 Homo sapiens (Human) PR
Q8R0S1 Atf7 Cyclic AMP-dependent transcription factor ATF-7 Mus musculus (Mouse) PR
P16951 Atf2 Cyclic AMP-dependent transcription factor ATF-2 Mus musculus (Mouse) SS
Q00969 Atf2 Cyclic AMP-dependent transcription factor ATF-2 Rattus norvegicus (Rat) SS
10 20 30 40 50 60
MYQDYPGNFD TSSRGSSGSP AHAESYSSGG GGQQKFRVDM PGSGSAFIPT INAITTSQDL
70 80 90 100 110 120
QWMVQPTVIT SMSNPYPRSH PYSPLPGLAS VPGHMALPRP GVIKTIGTTV GRRRRDEQLS
130 140 150 160 170 180
PEEEEKRRIR RERNKLAAAK CRNRRRELTE KLQAETEELE EEKSGLQKEI AELQKEKEKL
190 200 210 220 230 240
EFMLVAHGPV CKISPEERRS PPTSGLQSLR GTGSAVGPVV VKQEPPEEDS PSSSAGMDKT
250 260 270 280 290 300
QRSVIKPISI AGGGFYGEEP LHTPIVVTST PAITPGTSNL VFTYPNVLEQ ESPSSPSESC
310 320
SKAHRRSSSS GDQSSDSLNS PTLLAL