P46837
Gene name |
yhgF (b3407, JW3370) |
Protein name |
Protein YhgF |
Names |
|
Species |
Escherichia coli (strain K12) |
KEGG Pathway |
eco:b3407 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P46837
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P46837-F1 | Predicted | AlphaFoldDB |
No variants for P46837
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for P46837 | |||||
No associated diseases with P46837
7 regional properties for P46837
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | S1 domain | 649 - 720 | IPR003029 |
| domain | YqgF/RNase H-like domain | 327 - 424 | IPR006641 |
| domain | Tex-like protein, N-terminal | 10 - 193 | IPR018974 |
| domain | RNA-binding domain, S1 | 649 - 720 | IPR022967 |
| domain | Tex protein, YqgF-like domain | 328 - 451 | IPR032639 |
| domain | HHH domain 9 | 561 - 630 | IPR041692 |
| domain | Tex, S1 domain | 651 - 718 | IPR044146 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. |
| response to ionizing radiation | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays. |
| translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MMNDSFCRII | AGEIQARPEQ | VDAAVRLLDE | GNTVPFIARY | RKEITGGLDD | TQLRNLETRL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SYLRELEERR | QAILKSISEQ | GKLTDDLAKA | INATLSKTEL | EDLYLPYKPK | RRTRGQIAIE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| AGLEPLADLL | WSDPSHTPEV | AAAQYVYADK | GVADTKAALD | GARYILMERF | AEDAALLAKV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RDYLWKNAHL | VSTVVSGKEE | EGAKFRDYFD | HHEPLSTVPS | HRALAMFRGR | NEGVLQLSLN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| ADPQFDEPPK | ESYCEQIIMD | HLGLRLNNAP | ADSWRKGVVS | WTWRIKVLMH | LETELMGTVR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ERAEDEAINV | FARNLHDLLM | AAPAGLRATM | GLDPGLRTGV | KVAVVDATGK | LVATDTIYPH |
| 370 | 380 | 390 | 400 | 410 | 420 |
| TGQAAKAAMT | VAALCEKHNV | ELVAIGNGTA | SRETERFYLD | VQKQFPKVTA | QKVIVSEAGA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| SVYSASELAA | QEFPDLDVSL | RGAVSIARRL | QDPLAELVKI | DPKSIGVGQY | QHDVSQTQLA |
| 490 | 500 | 510 | 520 | 530 | 540 |
| RKLDAVVEDC | VNAVGVDLNT | ASVPLLTRVA | GLTRMMAQNI | VAWRDENGQF | QNRQQLLKVS |
| 550 | 560 | 570 | 580 | 590 | 600 |
| RLGPKAFEQC | AGFLRINHGD | NPLDASTVHP | EAYPVVERIL | AATQQALKDL | MGNSSELRNL |
| 610 | 620 | 630 | 640 | 650 | 660 |
| KASDFTDEKF | GVPTVTDIIK | ELEKPGRDPR | PEFKTAQFAD | GVETMNDLQP | GMILEGAVTN |
| 670 | 680 | 690 | 700 | 710 | 720 |
| VTNFGAFVDI | GVHQDGLVHI | SSLSNKFVED | PHTVVKAGDI | VKVKVLEVDL | QRKRIALTMR |
| 730 | 740 | 750 | 760 | 770 | |
| LDEQPGETNA | RRGGGNERPQ | NNRPAAKPRG | REAQPAGNSA | MMDALAAAMG | KKR |