Descriptions

ZAP-70, a Syk family cytoplasmic protein tyrosine kinase (PTK), is required to couple the activated T-cell antigen receptor (TCR) to downstream signaling pathways. It contains two tandem SH2 domains that bind to phosphorylated TCR subunits and a C-terminal catalytic domain. The region connecting the SH2 domains with the kinase domain (interdomain B) has previously been shown to have regulatory effects on ZAP-70 function by interacting with interdomain A.

Autoinhibitory domains (AIDs)

Target domain

338-600 (Protein kinase domain)

Relief mechanism

Partner binding, PTM

Assay

Mutagenesis experiment, Deletion assay, Structural analysis

Target domain

338-600 (Protein kinase domain)

Relief mechanism

Partner binding, PTM

Assay

Mutagenesis experiment, Deletion assay, Structural analysis

Accessory elements

478-504 (Activation loop from InterPro)

Target domain

338-600 (Protein kinase domain)

Relief mechanism

Assay

Autoinhibited structure

Activated structure

16 structures for P43403

Entry ID Method Resolution Chain Position Source
1FBV X-ray 290 A B 289-297 PDB
1M61 X-ray 250 A A 1-256 PDB
1U59 X-ray 230 A A 327-606 PDB
2CBL X-ray 210 A B 286-297 PDB
2OQ1 X-ray 190 A A 3-256 PDB
2OZO X-ray 260 A A 1-606 PDB
2Y1N X-ray 200 A B/D 286-297 PDB
3ZNI X-ray 221 A B/F/J/N 286-297 PDB
4A4B X-ray 279 A B 286-297 PDB
4A4C X-ray 270 A B 286-297 PDB
4K2R X-ray 300 A A 1-606 PDB
4XZ0 X-ray 200 A A 1-259 PDB
4XZ1 X-ray 280 A A 1-259 PDB
5O76 X-ray 247 A B/D 286-297 PDB
7SIY X-ray 148 A Z 292-296 PDB
AF-P43403-F1 Predicted AlphaFoldDB

500 variants for P43403

Variant ID(s) Position Change Description Diseaes Association Provenance
CA52553094
RCV000647918
rs1009114725
3 D>H ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
TOPMed
dbSNP
gnomAD
RCV001139373
CA1790034
rs745420613
67 G>C Combined immunodeficiency due to ZAP70 deficiency [ClinVar] Yes ClinGen
ClinVar
ExAC
dbSNP
gnomAD
rs113994172
RCV001852638
CA343167
RCV000032162
80 P>Q Combined immunodeficiency due to ZAP70 deficiency ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
RCV001226679
rs200679671
87 Y>* ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinVar
dbSNP
RCV001027642
CA347790444
rs1573262398
95 P>S Combined immunodeficiency [ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
rs368446882
CA1790096
RCV001329566
147 P>L Autoimmune disease, multisystem, infantile-onset, 2 [ClinVar] Yes ClinGen
ClinVar
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs145955907
RCV000647922
CA1790098
155 T>M ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs1266171275
RCV001141988
156 T>R Combined immunodeficiency due to ZAP70 deficiency [ClinVar] Yes ClinVar
dbSNP
VAR_077137
rs199840952
RCV001853323
RCV000227350
RCV001559120
RCV000208562
CA070999
192 R>W Autoimmune disease, multisystem, infantile-onset, 2 Combined immunodeficiency ADMIO2; decreases interaction with phosphorylated CD247; decreases ZAP70 phosphorylation; no effect on subcellular localization of CD69 at the cell surface Combined immunodeficiency due to ZAP70 deficiency ZAP70-Related Severe Combined Immunodeficiency [ClinVar, UniProt] Yes ClinGen
ClinVar
UniProt
ExAC
dbSNP
gnomAD
RCV000706557
CA1790156
RCV000658874
rs141564129
207 T>M ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
ESP
ExAC
TOPMed
dbSNP
gnomAD
RCV001143801
rs200295650
CA1790164
219 G>S Combined immunodeficiency due to ZAP70 deficiency [ClinVar] Yes ClinGen
ClinVar
ExAC
dbSNP
gnomAD
COSM1179161
RCV001335607
rs141613906
RCV001760438
CA1790170
231 T>M Autoimmune disease, multisystem, infantile-onset, 2 prostate [ClinVar, Cosmic] Yes ClinGen
cosmic curated
ClinVar
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs199502727
RCV000685456
CA1790244
276 T>M ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
1000Genomes
ExAC
TOPMed
dbSNP
gnomAD
rs762428344
RCV000693510
CA1790319
305 P>L ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
COSM1291553
RCV001856754
rs201386206
RCV001137244
CA1790323
307 P>L haematopoietic_and_lymphoid_tissue Combined immunodeficiency due to ZAP70 deficiency ZAP70-Related Severe Combined Immunodeficiency [Cosmic, ClinVar] Yes ClinGen
cosmic curated
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
RCV000822297
RCV000788289
CA1790330
rs200679935
314 V>M ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
RCV000707711
rs201605654
CA1790336
327 D>E ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
ESP
ExAC
TOPMed
dbSNP
gnomAD
CA347800584
rs1254428002
VAR_065623
337 L>R IMD48 [UniProt] Yes ClinGen
UniProt
TOPMed
dbSNP
gnomAD
RCV000596304
rs142702703
CA1790343
RCV000405371
RCV000548850
342 I>T Combined immunodeficiency due to ZAP70 deficiency ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
VAR_077138
rs869025224
RCV001559121
CA352138
RCV000233631
RCV000208547
360 R>P Autoimmune disease, multisystem, infantile-onset, 2 ADMIO2; no effect on interaction with phosphorylated CD247; increases TCR-induced Y-319 and Y-493 phosphorylation of ZAP70 and phosphorylation of LAT and LCP2; increases subcellular localization of CD69 at the cell surface; weakly decreases autoinhibition conformation Combined immunodeficiency Combined immunodeficiency due to ZAP70 deficiency [ClinVar, UniProt] Yes ClinGen
ClinVar
UniProt
TOPMed
dbSNP
RCV000687243
rs1559328006
416 M>missing ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinVar
dbSNP
RCV000032160
CA343162
VAR_065624
rs113994174
465 R>C IMD48 Combined immunodeficiency due to ZAP70 deficiency [UniProt, ClinVar] Yes ClinGen
ClinVar
UniProt
ExAC
TOPMed
dbSNP
gnomAD
RCV000033214
CA261254
VAR_015538
COSM1024104
rs137853201
465 R>H large_intestine endometrium IMD48 Combined immunodeficiency due to ZAP70 deficiency [Cosmic, UniProt, ClinVar] Yes ClinGen
cosmic curated
ClinVar
UniProt
ExAC
dbSNP
gnomAD
RCV000647919
rs758807149
CA1790453
472 R>Q ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
rs1559329401
CA347803656
RCV000694595
477 I>V ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
rs149765220
CA1790487
RCV000699346
497 S>L ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
RCV000014164
rs730880319
504 K>missing Combined immunodeficiency due to ZAP70 deficiency [ClinVar] Yes ClinVar
dbSNP
VAR_006351
RCV000033208
CA261252
rs104893674
518 S>R IMD48 Combined immunodeficiency due to ZAP70 deficiency [UniProt, ClinVar] Yes ClinGen
ClinVar
UniProt
Ensembl
dbSNP
CA347804498
RCV000687834
rs1559329735
531 E>K ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
RCV000297141
rs150950017
CA1790529
549 M>V Combined immunodeficiency due to ZAP70 deficiency [ClinVar] Yes ClinGen
ClinVar
ESP
ExAC
TOPMed
dbSNP
gnomAD
CA343164
RCV000032161
rs113994175
572 M>L Combined immunodeficiency due to ZAP70 deficiency [ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
CA347806303
rs1559330813
RCV000689774
586 F>S ZAP70-Related Severe Combined Immunodeficiency [ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
CA1790585
RCV000330929
rs371359430
611 T>I Combined immunodeficiency due to ZAP70 deficiency [ClinVar] Yes ClinGen
ClinVar
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs1559319752
RCV000722857
1 M>I No ClinVar
dbSNP
rs201017088
CA52553081
2 P>A No ClinGen
TOPMed
gnomAD
rs201017088
CA347786598
2 P>S No ClinGen
TOPMed
gnomAD
rs747992447
CA1790009
4 P>H No ClinGen
ExAC
gnomAD
rs1463285003
CA347786658
4 P>S No ClinGen
TOPMed
rs1458452246
CA347786700
5 A>V No ClinGen
gnomAD
rs765386540
CA52553113
6 A>E No ClinGen
ExAC
TOPMed
gnomAD
CA1790010
rs765386540
6 A>V No ClinGen
ExAC
TOPMed
gnomAD
rs1573261600
CA347786814
7 H>P No ClinGen
Ensembl
rs202216858
CA1790011
7 H>Q No ClinGen
ExAC
TOPMed
gnomAD
CA1790012
rs746909186
9 P>A No ClinGen
ExAC
TOPMed
gnomAD
CA52553143
rs867147272
12 Y>* No ClinGen
Ensembl
rs1340607126
CA347787061
13 G>R No ClinGen
gnomAD
rs1559319806
CA347787104
14 S>N No ClinGen
Ensembl
rs1342560587
CA347787234
16 S>L No ClinGen
TOPMed
CA347787268
rs1225966715
17 R>C No ClinGen
TOPMed
CA347787277
rs1246320051
17 R>H No ClinGen
TOPMed
gnomAD
rs1246320051
CA347787287
17 R>L No ClinGen
TOPMed
gnomAD
rs770495620
CA1790014
20 A>V No ClinGen
ExAC
gnomAD
CA347787407
rs1275740537
21 E>* No ClinGen
gnomAD
rs1315183954
CA347787643
26 L>V No ClinGen
TOPMed
rs373708142
CA1790016
27 A>E No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs201125862
CA1790015
27 A>T No ClinGen
ExAC
gnomAD
CA347787749
rs1424537060
29 M>T No ClinGen
gnomAD
rs201941891
CA52553161
30 A>E No ClinGen
Ensembl
CA52553163
rs201941891
30 A>V No ClinGen
Ensembl
rs1371279634
CA347787890
32 G>R No ClinGen
gnomAD
CA347787942
rs1475005133
33 L>F No ClinGen
gnomAD
CA347788050
rs1372126744
35 L>R No ClinGen
gnomAD
rs56077145
CA52553172
36 L>V No ClinGen
Ensembl
rs1573261820
CA347788105
37 R>G No ClinGen
Ensembl
rs1311937867
CA347788126
37 R>H No ClinGen
gnomAD
CA1790020
rs762308963
38 Q>H No ClinGen
ExAC
gnomAD
RCV000578778
CA347788238
rs897972295
39 C>* No ClinGen
ClinVar
TOPMed
dbSNP
gnomAD
rs767957548
CA1790021
41 R>H No ClinGen
ExAC
gnomAD
rs767957548
CA347788307
41 R>L No ClinGen
ExAC
gnomAD
CA52553189
rs200207787
43 L>Q No ClinGen
Ensembl
CA347788427
rs1232545576
44 G>D No ClinGen
gnomAD
rs1483668148
CA347788440
45 G>R No ClinGen
TOPMed
gnomAD
CA347788436
rs1483668148
45 G>S No ClinGen
TOPMed
gnomAD
CA1790024
rs766487707
46 Y>C No ClinGen
ExAC
gnomAD
CA347788525
rs1371503399
48 L>V No ClinGen
TOPMed
CA52553199
rs201525133
49 S>L No ClinGen
Ensembl
CA1790025
rs753930352
51 V>A No ClinGen
ExAC
gnomAD
CA347788621
rs1464403880
51 V>L No ClinGen
gnomAD
CA347788655
rs1391918526
52 H>P No ClinGen
gnomAD
rs138447206
CA347788663
52 H>Q No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA52553210
rs377195771
52 H>Y No ClinGen
Ensembl
rs1377860088
CA347788690
54 V>M No ClinGen
gnomAD
CA347788727
rs752880934
55 R>C No ClinGen
ExAC
gnomAD
CA1790029
rs758219921
55 R>H No ClinGen
ExAC
gnomAD
CA1790028
rs752880934
55 R>S No ClinGen
ExAC
gnomAD
CA347788970
rs1422665524
61 I>N No ClinGen
TOPMed
rs1253501517
CA347789007
62 E>G No ClinGen
TOPMed
CA347788995
rs1439174498
62 E>K No ClinGen
gnomAD
CA347789001
rs1439174498
62 E>Q No ClinGen
gnomAD
CA347789021
rs1300937876
63 R>C No ClinGen
gnomAD
rs1313032320
CA347789032
COSM95554
63 R>H lung [Cosmic] No ClinGen
cosmic curated
gnomAD
rs770705407
CA1790032
64 Q>H No ClinGen
ExAC
TOPMed
gnomAD
CA52553241
rs770705407
RCV000498370
64 Q>H No ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
rs1235629943
CA347789073
64 Q>R No ClinGen
gnomAD
rs781177968
CA347789140
66 N>K No ClinGen
ExAC
TOPMed
gnomAD
CA52553243
rs200701137
66 N>S No ClinGen
TOPMed
gnomAD
rs749246243
CA52553242
66 N>Y No ClinGen
Ensembl
rs745420613
CA347789185
67 G>S No ClinGen
ExAC
gnomAD
rs1467042851
CA347789249
68 T>I No ClinGen
TOPMed
gnomAD
CA1790035
rs138628302
68 T>S No ClinGen
1000Genomes
ESP
ExAC
gnomAD
CA347789233
rs1467042851
68 T>S No ClinGen
TOPMed
gnomAD
CA1790036
rs201924061
70 A>T No ClinGen
ExAC
TOPMed
gnomAD
rs982662914
CA52553256
73 G>C No ClinGen
TOPMed
rs982662914
CA347789438
73 G>R No ClinGen
TOPMed
rs982662914
CA347789435
73 G>S No ClinGen
TOPMed
rs1002450853
CA52553279
74 G>C No ClinGen
TOPMed
rs1410760446
CA347789619
77 H>R No ClinGen
gnomAD
rs767405698
CA52553291
78 C>R No ClinGen
gnomAD
CA347789711
rs1428158220
79 G>V No ClinGen
TOPMed
CA347789720
rs1391474757
80 P>S No ClinGen
gnomAD
CA52553321
rs937789882
81 A>G No ClinGen
gnomAD
rs867541716
CA347789741
81 A>S No ClinGen
TOPMed
gnomAD
CA52553312
rs867541716
81 A>T No ClinGen
TOPMed
gnomAD
CA347789802
rs937789882
81 A>V No ClinGen
gnomAD
CA347789812
rs1388859022
82 E>K No ClinGen
gnomAD
rs1388859022
CA347789821
82 E>Q No ClinGen
gnomAD
rs201106827
CA52553327
84 C>R No ClinGen
Ensembl
CA347790007
rs1305217788
85 E>K No ClinGen
gnomAD
CA347790005
rs1305217788
85 E>Q No ClinGen
gnomAD
rs1229106707
CA347790139
87 Y>H No ClinGen
gnomAD
rs1054793684
CA52553337
88 S>L No ClinGen
TOPMed
rs1332610325
CA347790273
89 R>H No ClinGen
TOPMed
gnomAD
CA347790288
rs1332610325
89 R>L No ClinGen
TOPMed
gnomAD
rs759571835
CA1790043
91 P>L No ClinGen
ExAC
gnomAD
rs1265925158
CA347790350
91 P>T No ClinGen
gnomAD
CA52553374
rs930274911
92 D>Y No ClinGen
Ensembl
CA52553379
rs1047650227
93 G>E No ClinGen
Ensembl
rs765316566
CA1790044
95 P>H No ClinGen
ExAC
TOPMed
gnomAD
CA1790046
rs758557607
99 R>C No ClinGen
ExAC
gnomAD
rs1183754253
CA347790548
99 R>H No ClinGen
gnomAD
rs1183754253
CA347790549
99 R>P No ClinGen
gnomAD
rs1573262435
CA347790599
101 P>Q No ClinGen
Ensembl
CA347790605
rs1414958584
102 C>S No ClinGen
gnomAD
rs56264206
CA52553393
103 N>I No ClinGen
ExAC
gnomAD
CA52553399
rs55845489
103 N>K No ClinGen
Ensembl
CA1790047
rs56264206
103 N>T No ClinGen
ExAC
gnomAD
rs55679020
CA52553402
104 R>P No ClinGen
Ensembl
rs781033785
CA1790050
106 S>L No ClinGen
ExAC
TOPMed
gnomAD
CA347790765
rs745778680
107 G>C No ClinGen
ExAC
gnomAD
CA1790051
rs745778680
107 G>S No ClinGen
ExAC
gnomAD
CA347790825
rs1355877484
109 E>G No ClinGen
TOPMed
rs559342309
CA52553411
109 E>K No ClinGen
1000Genomes
TOPMed
rs1263938808
CA347790872
110 P>L No ClinGen
TOPMed
CA347790860
rs1353682044
110 P>T No ClinGen
gnomAD
CA347790900
rs1313419932
112 P>L No ClinGen
gnomAD
CA52553436
rs111771234
115 F>I No ClinGen
Ensembl
rs1266626102
CA347791077
117 C>R No ClinGen
Ensembl
rs1472217674
CA347791184
121 A>P No ClinGen
gnomAD
rs1228028458
CA347791196
121 A>V No ClinGen
gnomAD
CA347791256
rs1181926950
123 V>A No ClinGen
gnomAD
rs774131317
CA1790056
124 R>G No ClinGen
ExAC
TOPMed
gnomAD
rs747379748
CA1790057
124 R>H No ClinGen
ExAC
gnomAD
CA347791297
rs1370381457
125 D>N No ClinGen
gnomAD
CA1790058
rs200514384
126 Y>S No ClinGen
ExAC
gnomAD
rs1310156774
CA347791416
127 V>A No ClinGen
gnomAD
CA347791509
rs1447408552
130 T>M No ClinGen
gnomAD
rs1357628018
CA347791493
130 T>S No ClinGen
gnomAD
CA347791609
rs1381290076
134 E>Q No ClinGen
gnomAD
CA1790091
rs778513394
137 A>D No ClinGen
ExAC
gnomAD
CA1790090
rs754563357
137 A>T No ClinGen
ExAC
gnomAD
CA1790092
rs752305377
COSM273479
138 L>P large_intestine [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
rs1402343539
CA347792121
142 I>V No ClinGen
TOPMed
gnomAD
rs201206711
CA52553885
143 I>F No ClinGen
Ensembl
CA52553888
rs202119308
144 S>G No ClinGen
Ensembl
CA347792266
rs1311654602
146 A>T No ClinGen
TOPMed
CA347792281
rs1363566836
146 A>V No ClinGen
TOPMed
gnomAD
rs746301498
CA1790095
147 P>S No ClinGen
ExAC
gnomAD
CA347792507
rs1470870960
152 L>V No ClinGen
gnomAD
CA347792645
rs1266171275
156 T>M No ClinGen
gnomAD
CA1790102
rs56404668
158 H>Q No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs56404668
CA347792708
158 H>Q No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA347792757
rs1263533157
159 E>* No ClinGen
TOPMed
gnomAD
CA347792724
rs1263533157
159 E>K No ClinGen
TOPMed
gnomAD
rs1197780352
CA347792809
160 R>L No ClinGen
TOPMed
gnomAD
rs1197780352
CA347792811
COSM199054
160 R>Q large_intestine [Cosmic] No ClinGen
cosmic curated
TOPMed
gnomAD
rs773287941
CA1790103
160 R>W No ClinGen
ExAC
gnomAD
CA52553957
rs921816880
162 P>H No ClinGen
gnomAD
rs1573264701
CA347793005
164 Y>D No ClinGen
Ensembl
rs563362950
CA1790104
166 S>R No ClinGen
1000Genomes
ExAC
gnomAD
rs1177542120
CA347793057
166 S>T No ClinGen
gnomAD
CA52553978
rs201480172
168 L>Q No ClinGen
Ensembl
rs1387121068
CA347793126
169 T>M No ClinGen
gnomAD
rs1321776015
CA347793134
170 R>C No ClinGen
TOPMed
gnomAD
CA1790106
rs199631517
171 E>G No ClinGen
1000Genomes
ExAC
gnomAD
CA1790108
rs764657700
174 E>K No ClinGen
ExAC
TOPMed
gnomAD
CA1790110
rs752318274
175 R>C No ClinGen
ExAC
gnomAD
rs752318274
CA1790109
175 R>G No ClinGen
ExAC
gnomAD
rs55964305
CA347793217
175 R>H No ClinGen
gnomAD
CA52554004
rs55964305
VAR_041846
175 R>L No ClinGen
UniProt
dbSNP
gnomAD
rs752318274
CA52553994
175 R>S No ClinGen
ExAC
gnomAD
rs777528648
CA1790111
176 K>R No ClinGen
ExAC
gnomAD
rs756495134
CA1790113
179 S>A No ClinGen
ExAC
gnomAD
rs749801885
CA1790115
181 A>G No ClinGen
ExAC
TOPMed
gnomAD
CA347793375
rs1481187788
185 G>S No ClinGen
TOPMed
gnomAD
rs1573278256
CA347796516
190 R>G No ClinGen
Ensembl
rs745705250
CA1790140
190 R>K No ClinGen
ExAC
TOPMed
gnomAD
COSM722805
CA1790142
rs56403250
VAR_041847
191 P>L lung [Cosmic] No ClinGen
cosmic curated
UniProt
ExAC
TOPMed
dbSNP
gnomAD
CA347796590
rs56403250
191 P>R No ClinGen
ExAC
TOPMed
gnomAD
CA347796581
rs1352577409
191 P>S No ClinGen
TOPMed
rs200950204
CA1790144
192 R>Q No ClinGen
ExAC
gnomAD
CA1790146
rs767210412
194 E>G No ClinGen
ExAC
gnomAD
rs1085307460
CA347796778
RCV000488997
197 T>I No ClinGen
ClinVar
Ensembl
dbSNP
CA347796784
rs1573278361
198 Y>N No ClinGen
Ensembl
CA347796823
rs1172768882
199 A>S No ClinGen
gnomAD
rs372504093
CA1790150
200 L>V No ClinGen
ExAC
TOPMed
gnomAD
rs758760631
CA1790151
202 L>F No ClinGen
ExAC
rs751747318
CA1790153
203 I>N No ClinGen
ExAC
gnomAD
rs757387976
CA1790154
204 Y>C No ClinGen
ExAC
gnomAD
CA52558400
rs775411958
207 T>A No ClinGen
gnomAD
CA347797092
rs1276040105
208 V>A No ClinGen
gnomAD
rs972240380
CA52558407
210 H>P No ClinGen
Ensembl
rs1573278519
CA347797153
211 Y>S No ClinGen
Ensembl
CA1790160
rs768536920
213 I>L No ClinGen
ExAC
gnomAD
CA347797293
rs539122081
214 S>I No ClinGen
1000Genomes
ExAC
gnomAD
CA1790161
rs539122081
214 S>N No ClinGen
1000Genomes
ExAC
gnomAD
CA52558474
rs201082521
215 Q>E No ClinGen
TOPMed
gnomAD
rs1488118538
CA347797346
215 Q>R No ClinGen
TOPMed
rs761356923
CA1790162
216 D>E No ClinGen
ExAC
gnomAD
CA347797452
rs76059124
218 A>E No ClinGen
1000Genomes
ExAC
gnomAD
CA1790163
rs76059124
218 A>V No ClinGen
1000Genomes
ExAC
gnomAD
CA1790166
rs201752492
224 P>L No ClinGen
ExAC
gnomAD
CA347797700
rs760183161
224 P>S No ClinGen
ExAC
gnomAD
rs760183161
CA1790165
224 P>T No ClinGen
ExAC
gnomAD
rs144692859
COSM1233089
CA52558516
225 E>K large_intestine [Cosmic] No ClinGen
cosmic curated
ESP
TOPMed
gnomAD
CA347797763
rs1331433365
226 G>D No ClinGen
TOPMed
rs1366382162
CA347797825
228 K>R No ClinGen
gnomAD
rs141613906
CA1790169
231 T>K No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA52558567
rs201643850
232 L>F No ClinGen
ExAC
rs201643850
CA1790173
232 L>I No ClinGen
ExAC
CA347798083
rs1326428934
234 Q>H No ClinGen
gnomAD
CA1790193
rs754055723
243 A>V No ClinGen
ExAC
TOPMed
gnomAD
rs199874724
CA1790196
245 G>R No ClinGen
ExAC
TOPMed
gnomAD
CA347798488
rs1425056615
248 Y>C No ClinGen
gnomAD
CA52558716
rs986312759
248 Y>H No ClinGen
Ensembl
CA347798578
rs1389260580
252 E>K No ClinGen
TOPMed
rs770442214
CA1790200
254 C>Y No ClinGen
ExAC
gnomAD
rs982668677
CA52558752
255 P>S No ClinGen
TOPMed
gnomAD
rs1573279210
CA347798714
257 S>N No ClinGen
Ensembl
rs769148384
CA347798766
260 S>I No ClinGen
ExAC
TOPMed
gnomAD
rs769148384
CA1790204
260 S>T No ClinGen
ExAC
TOPMed
gnomAD
CA1790205
rs200035151
261 N>K No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs1359245245
CA347798788
261 N>S No ClinGen
TOPMed
gnomAD
rs1359245245
CA347798786
261 N>T No ClinGen
TOPMed
gnomAD
rs768188594
CA1790207
262 A>S No ClinGen
ExAC
gnomAD
CA347798859
rs1324339707
264 G>A No ClinGen
gnomAD
CA1790208
rs572701573
264 G>R No ClinGen
1000Genomes
ExAC
gnomAD
rs779887992
CA347798864
265 A>P No ClinGen
ExAC
gnomAD
rs779887992
CA1790240
265 A>T No ClinGen
ExAC
gnomAD
rs1485459282
CA347798870
265 A>V No ClinGen
gnomAD
CA347798883
rs1205433722
267 A>T No ClinGen
gnomAD
CA347798894
rs1263424588
268 P>S No ClinGen
gnomAD
rs1573279835
CA347798912
269 T>P No ClinGen
Ensembl
rs1429425867
CA347798929
270 L>P No ClinGen
gnomAD
rs1179297779
CA347798945
272 A>T No ClinGen
gnomAD
CA347798961
rs1573279890
273 H>P No ClinGen
Ensembl
CA347798959
rs1410316068
273 H>Y No ClinGen
gnomAD
rs955067565
CA52559049
275 S>P No ClinGen
Ensembl
CA347799034
rs1244767669
278 T>I No ClinGen
gnomAD
CA347799045
rs759650270
279 H>Q No ClinGen
ExAC
TOPMed
gnomAD
CA1790247
rs759650270
279 H>Q No ClinGen
ExAC
TOPMed
gnomAD
rs201776628
CA1790246
279 H>Y No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs760626189
CA1790277
280 P>A No ClinGen
ExAC
TOPMed
gnomAD
rs760626189
CA1790278
280 P>T No ClinGen
ExAC
TOPMed
gnomAD
rs753453013
CA1790279
281 Q>R No ClinGen
ExAC
gnomAD
rs754420169
CA1790280
283 R>* No ClinGen
ExAC
gnomAD
CA347799256
rs764977425
283 R>L No ClinGen
ExAC
gnomAD
CA1790281
rs764977425
283 R>Q No ClinGen
ExAC
gnomAD
CA1790284
rs781477800
COSM1233086
285 D>N large_intestine [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
CA52559320
rs200126170
RCV000788288
289 S>* No ClinGen
ClinVar
Ensembl
dbSNP
CA52559327
rs909677452
293 T>S No ClinGen
Ensembl
CA347799539
rs1573280624
294 P>A No ClinGen
Ensembl
CA1790287
rs780517718
295 E>K No ClinGen
ExAC
gnomAD
CA52559339
rs201225206
296 P>S No ClinGen
Ensembl
CA52560310
rs200214533
298 R>C No ClinGen
Ensembl
rs201560822
CA52560311
298 R>H No ClinGen
Ensembl
CA347800260
rs1317877867
299 I>M No ClinGen
gnomAD
rs769350009
CA1790316
300 T>M No ClinGen
ExAC
gnomAD
rs1573282556
CA347800267
301 S>P No ClinGen
Ensembl
CA347800273
rs1559327026
302 P>A No ClinGen
Ensembl
rs574174678
CA1790318
302 P>L No ClinGen
1000Genomes
ExAC
gnomAD
CA347800284
rs1200167356
303 D>E No ClinGen
gnomAD
rs1490208855
COSM73325
CA347800281
303 D>G ovary [Cosmic] No ClinGen
cosmic curated
gnomAD
CA347800291
rs1573282601
304 K>N No ClinGen
Ensembl
rs762428344
CA1790320
305 P>R No ClinGen
ExAC
TOPMed
gnomAD
CA347800294
rs1453010410
305 P>S No ClinGen
TOPMed
CA347800299
rs1157897539
306 R>P No ClinGen
gnomAD
CA1790321
rs200510184
306 R>W No ClinGen
1000Genomes
ExAC
gnomAD
COSM1270671
rs903840321
CA52560389
312 T>M oesophagus [Cosmic] No ClinGen
cosmic curated
TOPMed
gnomAD
CA347800347
rs1333449768
313 S>I No ClinGen
gnomAD
rs145218891
CA1790328
313 S>R No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA1790327
rs145218891
313 S>R No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs770861777
CA1790331
316 E>Q No ClinGen
ExAC
gnomAD
CA347800382
rs1573282754
318 P>L No ClinGen
Ensembl
CA347800385
rs1559327119
319 Y>H No ClinGen
Ensembl
CA52560435
rs199993140
321 D>H No ClinGen
TOPMed
CA347800400
rs199993140
321 D>N No ClinGen
TOPMed
rs200511463
CA1790335
325 L>F No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs1294092617
CA347800435
326 K>E No ClinGen
gnomAD
CA347800437
rs1437082261
326 K>R No ClinGen
TOPMed
rs1376561896
CA347800443
327 D>N No ClinGen
TOPMed
rs1233378293
CA347800483
329 K>R No ClinGen
gnomAD
CA1790337
rs371574765
330 L>F No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs200119693
CA52560480
334 R>H No ClinGen
gnomAD
rs1186682126
CA347800538
334 R>S No ClinGen
TOPMed
rs1424948927
CA347800556
335 D>E No ClinGen
gnomAD
rs767197242
CA1790340
336 N>D No ClinGen
ExAC
gnomAD
rs1573282936
CA347800563
336 N>T No ClinGen
Ensembl
rs754217622
CA1790341
337 L>I No ClinGen
ExAC
TOPMed
gnomAD
CA1790342
rs201221859
338 L>F No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA347800595
rs1328780961
339 I>T No ClinGen
gnomAD
rs1559327232
CA347800597
340 A>T No ClinGen
Ensembl
CA52560519
rs199863426
343 E>* No ClinGen
Ensembl
rs948337308
CA52560533
346 C>R No ClinGen
TOPMed
CA347800684
COSM2152996
rs1337608513
347 G>S central_nervous_system [Cosmic] No ClinGen
cosmic curated
gnomAD
CA347800696
rs1195234572
348 N>D No ClinGen
gnomAD
CA347800756
rs1273641941
353 R>S No ClinGen
gnomAD
rs113310375
CA52560579
356 V>A No ClinGen
Ensembl
rs1242353145
CA347800821
356 V>M No ClinGen
gnomAD
CA347800844
rs1573283113
357 Y>S No ClinGen
Ensembl
rs202131881
CA1790347
358 R>C No ClinGen
ExAC
TOPMed
gnomAD
CA1790348
rs757486529
359 M>L No ClinGen
ExAC
gnomAD
CA1790349
rs781463009
360 R>C No ClinGen
ExAC
TOPMed
gnomAD
rs1235187213
CA347801209
362 K>N No ClinGen
gnomAD
rs1205411655
CA347801283
365 D>E No ClinGen
gnomAD
CA347801278
rs1208694003
365 D>G No ClinGen
TOPMed
rs1349649637
CA347801270
365 D>H No ClinGen
gnomAD
CA347801290
rs1264869571
366 V>M No ClinGen
gnomAD
CA347801335
rs1353718347
368 I>V No ClinGen
TOPMed
rs1573284622
CA347801419
372 K>T No ClinGen
Ensembl
CA1790379
rs746618369
373 Q>H No ClinGen
ExAC
gnomAD
rs770061572
CA1790380
374 G>D No ClinGen
ExAC
gnomAD
rs1178844697
CA347801449
374 G>S No ClinGen
TOPMed
gnomAD
COSM477791
rs776066014
CA1790381
375 T>M kidney large_intestine [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
CA347801473
rs776066014
375 T>R No ClinGen
ExAC
gnomAD
CA1790383
rs764746969
376 E>K No ClinGen
ExAC
gnomAD
CA347801516
rs921796161
378 A>G No ClinGen
TOPMed
gnomAD
CA1790384
rs774959464
378 A>T No ClinGen
ExAC
gnomAD
CA52561479
rs921796161
378 A>V No ClinGen
TOPMed
gnomAD
CA347801545
rs1573284696
380 T>M No ClinGen
Ensembl
CA1790387
rs199944085
385 R>C No ClinGen
ExAC
TOPMed
gnomAD
rs1559327875
CA347801619
385 R>H No ClinGen
Ensembl
rs199944085
CA1790388
385 R>S No ClinGen
ExAC
TOPMed
gnomAD
CA347801631
rs1335015444
386 E>* No ClinGen
TOPMed
gnomAD
CA347801628
rs1335015444
386 E>Q No ClinGen
TOPMed
gnomAD
CA52561551
rs1000673530
387 A>V No ClinGen
Ensembl
rs146721343
CA52561566
392 Q>H No ClinGen
ESP
rs201949417
CA52561556
392 Q>K No ClinGen
Ensembl
rs754732382
CA1790391
395 N>S No ClinGen
ExAC
gnomAD
CA1790392
rs200097002
397 Y>C No ClinGen
ExAC
TOPMed
gnomAD
rs752635149
CA1790393
398 I>F No ClinGen
ExAC
TOPMed
gnomAD
rs752635149
CA1790394
398 I>V No ClinGen
ExAC
TOPMed
gnomAD
rs777273862
CA1790395
399 V>L No ClinGen
ExAC
TOPMed
gnomAD
CA347801789
rs1177191144
400 R>Q No ClinGen
TOPMed
CA1790396
rs746499029
401 L>F No ClinGen
ExAC
rs770766093
CA1790397
402 I>V No ClinGen
ExAC
gnomAD
rs1382435617
CA347801831
403 G>D No ClinGen
gnomAD
rs150323148
CA52561620
409 A>S No ClinGen
ESP
gnomAD
CA1790398
rs780970275
409 A>V No ClinGen
ExAC
TOPMed
gnomAD
rs201100932
CA1790401
410 L>F No ClinGen
1000Genomes
ExAC
gnomAD
rs201100932
CA1790400
410 L>V No ClinGen
1000Genomes
ExAC
gnomAD
COSM1024102
rs201293673
CA1790402
413 V>I endometrium [Cosmic] No ClinGen
cosmic curated
1000Genomes
ExAC
gnomAD
rs1032106214
CA52561670
416 M>V No ClinGen
Ensembl
CA347802108
rs1296384937
417 A>V No ClinGen
gnomAD
rs772452475
CA1790403
418 G>W No ClinGen
ExAC
gnomAD
rs1380264429
CA347802135
419 G>D No ClinGen
gnomAD
CA347802132
rs1197809501
419 G>S No ClinGen
TOPMed
rs760646899
CA1790405
420 G>R No ClinGen
ExAC
gnomAD
rs766625540
CA1790406
COSM3783452
421 P>L prostate [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
rs759353566
CA1790408
423 H>Y No ClinGen
ExAC
TOPMed
gnomAD
rs764958623
CA1790409
425 F>C No ClinGen
ExAC
TOPMed
gnomAD
rs764958623
RCV001328422
CA1790410
425 F>Y No ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
RCV000482821
rs1064793340
427 V>missing No ClinVar
dbSNP
rs1443145518
CA347802229
427 V>D No ClinGen
TOPMed
gnomAD
CA52561710
rs149448335
428 G>C No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA52561702
rs149448335
428 G>R No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA1790413
rs149448335
428 G>S No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs781013132
CA1790415
430 R>W No ClinGen
ExAC
gnomAD
rs1214000974
CA347803229
432 E>D No ClinGen
TOPMed
gnomAD
rs747461254
CA1790440
436 S>N No ClinGen
ExAC
TOPMed
gnomAD
rs747461254
CA347803252
436 S>T No ClinGen
ExAC
TOPMed
gnomAD
rs201906752
CA1790442
440 E>K No ClinGen
ESP
ExAC
gnomAD
CA52564024
rs199775081
441 L>M No ClinGen
Ensembl
CA1790444
rs770105318
442 L>P No ClinGen
ExAC
gnomAD
CA52564033
rs373787406
445 V>M No ClinGen
Ensembl
rs775546124
CA1790445
447 M>V No ClinGen
ExAC
TOPMed
gnomAD
CA347803406
rs1300700279
456 N>S No ClinGen
gnomAD
rs1344287196
CA347803419
457 F>S No ClinGen
gnomAD
CA347803452
rs1436454526
460 R>C No ClinGen
TOPMed
gnomAD
rs1275947613
CA347803454
460 R>H No ClinGen
gnomAD
CA1790448
rs774434467
463 A>E No ClinGen
ExAC
gnomAD
CA347803487
rs774434467
COSM1532891
463 A>V lung [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
rs1219039007
CA347803498
464 A>G No ClinGen
gnomAD
CA1790451
rs766082644
467 V>I No ClinGen
ExAC
gnomAD
RCV000454753
rs1060499918
CA16609720
470 V>G No ClinGen
ClinVar
Ensembl
dbSNP
rs1176359520
CA347803572
471 N>S No ClinGen
gnomAD
rs201266526
COSM3739993
CA1790452
472 R>W liver [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
CA347803591
rs1364472395
473 H>P No ClinGen
gnomAD
rs199994054
CA1790455
475 A>S No ClinGen
ExAC
TOPMed
gnomAD
rs199994054
CA52564165
475 A>T No ClinGen
ExAC
TOPMed
gnomAD
rs201117726
CA1790457
478 S>G No ClinGen
ExAC
TOPMed
gnomAD
rs1559329419
CA347803750
482 L>F No ClinGen
Ensembl
rs775805179
CA1790460
485 A>V No ClinGen
ExAC
gnomAD
CA347803824
rs1291960553
487 G>D No ClinGen
gnomAD
rs200914614
CA1790462
489 D>G No ClinGen
ExAC
TOPMed
gnomAD
CA347803841
rs1238614221
489 D>N No ClinGen
TOPMed
gnomAD
CA1790464
rs56059280
490 D>N No ClinGen
ExAC
TOPMed
gnomAD
rs1164453696
CA347803942
494 T>I No ClinGen
gnomAD
rs770902102
CA1790485
496 R>C No ClinGen
ExAC
gnomAD
rs150631046
COSM2153520
CA1790486
496 R>H central_nervous_system [Cosmic] No ClinGen
cosmic curated
ESP
ExAC
TOPMed
gnomAD
rs150631046
CA347803989
496 R>L No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA52564438
rs867742833
502 P>S No ClinGen
Ensembl
CA1790491
rs767813141
505 W>* No ClinGen
ExAC
gnomAD
CA347804106
rs1231599043
505 W>* No ClinGen
TOPMed
rs767813141
CA52564508
505 W>C No ClinGen
ExAC
gnomAD
CA347804123
rs1573289714
506 Y>D No ClinGen
Ensembl
rs1490601314
COSM3695679
CA347804141
507 A>T large_intestine [Cosmic] No ClinGen
cosmic curated
TOPMed
CA347804175
rs1413652168
509 E>G No ClinGen
TOPMed
gnomAD
rs550812644
CA1790493
COSM1024106
509 E>K endometrium [Cosmic] No ClinGen
cosmic curated
1000Genomes
ExAC
gnomAD
COSM199058
rs1264564157
CA347804254
514 R>C large_intestine [Cosmic] No ClinGen
cosmic curated
gnomAD
CA347804256
rs1479110292
COSM1233087
514 R>H large_intestine [Cosmic] No ClinGen
cosmic curated
TOPMed
gnomAD
rs1479110292
CA347804260
514 R>L No ClinGen
TOPMed
gnomAD
rs780586765
CA1790495
517 S>P No ClinGen
ExAC
gnomAD
rs959265564
CA52564591
519 R>C No ClinGen
TOPMed
gnomAD
rs201003454
CA1790497
519 R>H No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
COSM1024110
rs748318780
CA1790499
521 D>N endometrium [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
VAR_041849
rs56189815
CA52564605
523 W>L No ClinGen
UniProt
Ensembl
dbSNP
rs771994200
CA1790500
523 W>R No ClinGen
ExAC
gnomAD
rs777782165
CA1790501
526 G>A No ClinGen
ExAC
gnomAD
rs1559329712
CA347804424
526 G>R No ClinGen
Ensembl
CA52564615
rs56146954
527 V>G No ClinGen
Ensembl
rs1301038594
CA347804434
527 V>I No ClinGen
TOPMed
CA1790502
rs746810754
530 W>* No ClinGen
ExAC
gnomAD
rs776602738
CA52564617
536 G>R No ClinGen
ExAC
TOPMed
gnomAD
rs776602738
CA1790504
536 G>S No ClinGen
ExAC
TOPMed
gnomAD
rs1418519863
CA347804803
541 K>M No ClinGen
TOPMed
rs1483690367
CA347805028
543 M>L No ClinGen
gnomAD
CA347805129
rs1369094426
COSM1410139
546 P>L large_intestine [Cosmic] No ClinGen
cosmic curated
gnomAD
CA347805177
RCV000722512
rs1559329905
548 V>G No ClinGen
ClinVar
Ensembl
dbSNP
CA1790530
rs760966849
550 A>D No ClinGen
ExAC
gnomAD
rs766706397
CA1790531
552 I>V No ClinGen
ExAC
gnomAD
COSM1024111
CA1790533
rs760184455
553 E>K endometrium [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
rs1322986133
CA347805344
556 K>E No ClinGen
gnomAD
CA347805361
rs1220417043
556 K>N No ClinGen
TOPMed
rs201606579
CA52564836
COSM443415
557 R>Q breast [Cosmic] No ClinGen
cosmic curated
gnomAD
rs200513049
COSM1483396
CA1790535
557 R>W breast [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
rs1412860749
CA347805381
558 M>L No ClinGen
gnomAD
rs1573290488
CA347805403
559 E>G No ClinGen
Ensembl
rs1573290512
CA347805414
560 C>G No ClinGen
Ensembl
rs1064793298
CA16617775
RCV000482430
560 C>Y No ClinGen
ClinVar
Ensembl
dbSNP
rs1199615137
CA347805435
561 P>S No ClinGen
gnomAD
CA347805466
rs1482419899
562 P>L No ClinGen
gnomAD
rs989274981
CA52564842
562 P>S No ClinGen
TOPMed
gnomAD
CA1790536
rs369718198
563 E>K No ClinGen
ESP
ExAC
gnomAD
rs1360120006
CA347805506
564 C>G No ClinGen
TOPMed
CA1790538
rs757015607
567 E>K No ClinGen
ExAC
TOPMed
gnomAD
rs780975280
CA1790540
568 L>M No ClinGen
ExAC
TOPMed
gnomAD
rs780975280
CA1790539
568 L>V No ClinGen
ExAC
TOPMed
gnomAD
CA1790542
COSM199059
rs572839729
570 A>T large_intestine [Cosmic] No ClinGen
cosmic curated
1000Genomes
ExAC
gnomAD
rs1174846807
CA347805559
570 A>V No ClinGen
TOPMed
rs748826759
CA1790543
573 S>C No ClinGen
ExAC
gnomAD
rs1357191899
CA347805578
573 S>N No ClinGen
gnomAD
CA1790545
rs773884983
577 I>F No ClinGen
ExAC
gnomAD
CA347805620
rs747766986
578 Y>* No ClinGen
ExAC
TOPMed
gnomAD
CA347806231
rs1248786675
580 W>* No ClinGen
gnomAD
CA52566050
rs985765925
583 R>C No ClinGen
Ensembl
CA16617776
RCV000484238
rs1017182331
583 R>H No ClinGen
ClinVar
Ensembl
dbSNP
rs201469439
CA1790567
584 P>L No ClinGen
ExAC
TOPMed
gnomAD
rs746270455
CA1790566
584 P>S No ClinGen
ExAC
gnomAD
rs200648080
CA52566102
585 D>H No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA1790570
rs200648080
585 D>N No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs924497317
CA52566181
588 T>N No ClinGen
Ensembl
CA347806325
rs1573292818
588 T>P No ClinGen
Ensembl
CA1790574
rs149605945
589 V>M No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs753242822
CA1790575
592 R>C No ClinGen
ExAC
gnomAD
COSM140993
CA52566200
rs200586622
592 R>H upper_aerodigestive_tract [Cosmic] No ClinGen
cosmic curated
Ensembl
rs55724897
COSM1024112
CA52566212
594 R>* endometrium [Cosmic] No ClinGen
cosmic curated
gnomAD
rs55724897
CA347806405
594 R>G No ClinGen
gnomAD
rs55803111
CA1790576
594 R>Q No ClinGen
ExAC
gnomAD
rs56326640
CA52566235
595 A>S No ClinGen
gnomAD
CA347806415
rs56326640
595 A>T No ClinGen
gnomAD
CA1790577
rs753623803
596 C>F No ClinGen
ExAC
TOPMed
gnomAD
rs754998342
CA1790578
599 S>G No ClinGen
ExAC
gnomAD
rs1195627009
CA347806483
599 S>I No ClinGen
TOPMed
rs148332283
CA1790579
599 S>R No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1222194883
CA347806508
601 A>G No ClinGen
gnomAD
rs1451010493
CA347806501
601 A>T No ClinGen
gnomAD
rs1222194883
CA347806510
601 A>V No ClinGen
gnomAD
CA347806543
rs1573292982
604 V>G No ClinGen
Ensembl
rs918014655
CA52566281
607 P>L No ClinGen
gnomAD
CA1790582
rs777594416
607 P>S No ClinGen
ExAC
gnomAD
rs56250717
CA52566285
609 G>D No ClinGen
Ensembl
CA1790583
rs746603586
609 G>S No ClinGen
ExAC
TOPMed
gnomAD
rs770287572
CA1790584
610 S>N No ClinGen
ExAC
gnomAD
rs749604693
CA1790586
612 Q>H No ClinGen
ExAC
gnomAD
rs1160907260
CA347806630
612 Q>R No ClinGen
gnomAD
rs769243855
CA1790587
613 K>* No ClinGen
ExAC
TOPMed
gnomAD
rs1166106157
CA347806650
615 E>A No ClinGen
gnomAD
rs1200171477
CA347806658
616 A>P No ClinGen
TOPMed
rs1200171477
CA347806656
616 A>T No ClinGen
TOPMed
rs1444955242
CA347806689
618 C>F No ClinGen
gnomAD

1 associated diseases with P43403

[MIM: 601626]: Leukemia, acute myelogenous (AML)

A subtype of acute leukemia, a cancer of the white blood cells. AML is a malignant disease of bone marrow characterized by maturational arrest of hematopoietic precursors at an early stage of development. Clonal expansion of myeloid blasts occurs in bone marrow, blood, and other tissue. Myelogenous leukemias develop from changes in cells that normally produce neutrophils, basophils, eosinophils and monocytes. {ECO:0000269|PubMed:11090077, ECO:0000269|PubMed:11290608, ECO:0000269|PubMed:11442493, ECO:0000269|PubMed:14504097, ECO:0000269|PubMed:16266983, ECO:0000269|PubMed:18305215, ECO:0000269|PubMed:8946930, ECO:0000269|PubMed:9737679}. Note=The gene represented in this entry may be involved in disease pathogenesis. Somatic mutations that lead to constitutive activation of FLT3 are frequent in AML patients. These mutations fall into two classes, the most common being in-frame internal tandem duplications of variable length in the juxtamembrane region that disrupt the normal regulation of the kinase activity. Likewise, point mutations in the activation loop of the kinase domain can result in a constitutively activated kinase.

Without disease ID
  • A subtype of acute leukemia, a cancer of the white blood cells. AML is a malignant disease of bone marrow characterized by maturational arrest of hematopoietic precursors at an early stage of development. Clonal expansion of myeloid blasts occurs in bone marrow, blood, and other tissue. Myelogenous leukemias develop from changes in cells that normally produce neutrophils, basophils, eosinophils and monocytes. {ECO:0000269|PubMed:11090077, ECO:0000269|PubMed:11290608, ECO:0000269|PubMed:11442493, ECO:0000269|PubMed:14504097, ECO:0000269|PubMed:16266983, ECO:0000269|PubMed:18305215, ECO:0000269|PubMed:8946930, ECO:0000269|PubMed:9737679}. Note=The gene represented in this entry may be involved in disease pathogenesis. Somatic mutations that lead to constitutive activation of FLT3 are frequent in AML patients. These mutations fall into two classes, the most common being in-frame internal tandem duplications of variable length in the juxtamembrane region that disrupt the normal regulation of the kinase activity. Likewise, point mutations in the activation loop of the kinase domain can result in a constitutively activated kinase.

8 regional properties for P43403

Type Name Position InterPro Accession
domain Protein kinase domain 610 - 943 IPR000719
domain Serine-threonine/tyrosine-protein kinase, catalytic domain 610 - 943 IPR001245
conserved_site Tyrosine-protein kinase, receptor class III, conserved site 669 - 682 IPR001824
domain Immunoglobulin-like domain 253 - 343 IPR007110
active_site Tyrosine-protein kinase, active site 807 - 819 IPR008266
domain Immunoglobulin 257 - 344 IPR013151
binding_site Protein kinase, ATP binding site 616 - 644 IPR017441
domain Tyrosine-protein kinase, catalytic domain 610 - 943 IPR020635

Functions

Description
EC Number 2.7.10.2 Protein-tyrosine kinases
Subcellular Localization
  • Cytoplasm
  • Cell membrane ; Peripheral membrane protein
  • In quiescent T-lymphocytes, it is cytoplasmic
  • Upon TCR activation, it is recruited at the plasma membrane by interacting with CD247/CD3Z
  • Colocalizes together with RHOH in the immunological synapse
  • RHOH is required for its proper localization to the cell membrane and cytoskeleton fractions in the thymocytes (By similarity)
PANTHER Family PTHR24418 TYROSINE-PROTEIN KINASE
PANTHER Subfamily PTHR24418:SF369 TYROSINE-PROTEIN KINASE ZAP-70
PANTHER Protein Class non-receptor tyrosine protein kinase
PANTHER Pathway Category T cell activation
ZAP-70

7 GO annotations of cellular component

Name Definition
cell-cell junction A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects.
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
cytosol The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
extrinsic component of cytoplasmic side of plasma membrane The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its cytoplasmic surface, but not integrated into the hydrophobic region.
immunological synapse An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction.
plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
T cell receptor complex A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains.

6 GO annotations of molecular function

Name Definition
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
non-membrane spanning protein tyrosine kinase activity Catalysis of the reaction: ATP + protein L-tyrosine = ADP + protein L-tyrosine phosphate by a non-membrane spanning protein.
phosphotyrosine residue binding Binding to a phosphorylated tyrosine residue within a protein.
protein serine/threonine/tyrosine kinase activity Catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; ATP + a protein threonine = ADP + protein threonine phosphate; and ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
signaling receptor binding Binding to one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.

22 GO annotations of biological process

Name Definition
adaptive immune response An immune response mediated by cells expressing specific receptors for antigen produced through a somatic diversification process, and allowing for an enhanced secondary response to subsequent exposures to the same antigen (immunological memory).
B cell activation The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
beta selection The process in which successful recombination of a T cell receptor beta chain into a translatable protein coding sequence leads to rescue from apoptosis and subsequent proliferation of an immature T cell.
cell differentiation The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.
immune response Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.
innate immune response Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.
negative thymic T cell selection The process of elimination of immature T cells in the thymus which react strongly with self-antigens.
peptidyl-tyrosine phosphorylation The phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine.
positive regulation of alpha-beta T cell differentiation Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation.
positive regulation of alpha-beta T cell proliferation Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation.
positive regulation of calcium-mediated signaling Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling.
positive regulation of T cell differentiation Any process that activates or increases the frequency, rate or extent of T cell differentiation.
positive thymic T cell selection The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death.
protein autophosphorylation The phosphorylation by a protein of one or more of its own amino acid residues (cis-autophosphorylation), or residues on an identical protein (trans-autophosphorylation).
protein phosphorylation The process of introducing a phosphate group on to a protein.
T cell activation The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
T cell aggregation The adhesion of one T cell to one or more other T cells via adhesion molecules.
T cell differentiation The process in which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex.
T cell migration The movement of a T cell within or between different tissues and organs of the body.
T cell receptor signaling pathway The series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell.
transmembrane receptor protein tyrosine kinase signaling pathway The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.

36 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
F1N9Y5 SYK Tyrosine-protein kinase SYK Gallus gallus (Chicken) SS
P43405 SYK Tyrosine-protein kinase SYK Homo sapiens (Human) EV
Q13882 PTK6 Protein-tyrosine kinase 6 Homo sapiens (Human) EV
P09769 FGR Tyrosine-protein kinase Fgr Homo sapiens (Human) SS
P07948 LYN Tyrosine-protein kinase Lyn Homo sapiens (Human) SS
P06241 FYN Tyrosine-protein kinase Fyn Homo sapiens (Human) SS
P12931 SRC Proto-oncogene tyrosine-protein kinase Src Homo sapiens (Human) EV
P06239 LCK Tyrosine-protein kinase Lck Homo sapiens (Human) EV
P51451 BLK Tyrosine-protein kinase Blk Homo sapiens (Human) SS
P08631 HCK Tyrosine-protein kinase HCK Homo sapiens (Human) EV
P07947 YES1 Tyrosine-protein kinase Yes Homo sapiens (Human) SS
P42685 FRK Tyrosine-protein kinase FRK Homo sapiens (Human) EV
Q08881 ITK Tyrosine-protein kinase ITK/TSK Homo sapiens (Human) EV
Q06187 BTK Tyrosine-protein kinase BTK Homo sapiens (Human) EV
P51813 BMX Cytoplasmic tyrosine-protein kinase BMX Homo sapiens (Human) SS
P42680 TEC Tyrosine-protein kinase Tec Homo sapiens (Human) SS
P42679 MATK Megakaryocyte-associated tyrosine-protein kinase Homo sapiens (Human) SS
P41240 CSK Tyrosine-protein kinase CSK Homo sapiens (Human) SS
Q14289 PTK2B Protein-tyrosine kinase 2-beta Homo sapiens (Human) PR
Q05397 PTK2 Focal adhesion kinase 1 Homo sapiens (Human) EV
Q13470 TNK1 Non-receptor tyrosine-protein kinase TNK1 Homo sapiens (Human) PR
Q07912 TNK2 Activated CDC42 kinase 1 Homo sapiens (Human) EV
P16591 FER Tyrosine-protein kinase Fer Homo sapiens (Human) PR
Q6J9G0 STYK1 Tyrosine-protein kinase STYK1 Homo sapiens (Human) PR
P42684 ABL2 Tyrosine-protein kinase ABL2 Homo sapiens (Human) SS
P00519 ABL1 Tyrosine-protein kinase ABL1 Homo sapiens (Human) EV
P48025 Syk Tyrosine-protein kinase SYK Mus musculus (Mouse) SS
P43404 Zap70 Tyrosine-protein kinase ZAP-70 Mus musculus (Mouse) SS
Q00655 SYK Tyrosine-protein kinase SYK Sus scrofa (Pig) SS
Q64725 Syk Tyrosine-protein kinase SYK Rattus norvegicus (Rat) SS
Q9SYA0 At1g61500 G-type lectin S-receptor-like serine/threonine-protein kinase At1g61500 Arabidopsis thaliana (Mouse-ear cress) SS
Q9FG33 LECRKS5 Probable L-type lectin-domain containing receptor kinase S.5 Arabidopsis thaliana (Mouse-ear cress) PR
F4JTP5 STY46 Serine/threonine-protein kinase STY46 Arabidopsis thaliana (Mouse-ear cress) PR
O22558 STY8 Serine/threonine-protein kinase STY8 Arabidopsis thaliana (Mouse-ear cress) PR
Q2MHE4 HT1 Serine/threonine/tyrosine-protein kinase HT1 Arabidopsis thaliana (Mouse-ear cress) PR
Q8RWL6 STY17 Serine/threonine-protein kinase STY17 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MPDPAAHLPF FYGSISRAEA EEHLKLAGMA DGLFLLRQCL RSLGGYVLSL VHDVRFHHFP
70 80 90 100 110 120
IERQLNGTYA IAGGKAHCGP AELCEFYSRD PDGLPCNLRK PCNRPSGLEP QPGVFDCLRD
130 140 150 160 170 180
AMVRDYVRQT WKLEGEALEQ AIISQAPQVE KLIATTAHER MPWYHSSLTR EEAERKLYSG
190 200 210 220 230 240
AQTDGKFLLR PRKEQGTYAL SLIYGKTVYH YLISQDKAGK YCIPEGTKFD TLWQLVEYLK
250 260 270 280 290 300
LKADGLIYCL KEACPNSSAS NASGAAAPTL PAHPSTLTHP QRRIDTLNSD GYTPEPARIT
310 320 330 340 350 360
SPDKPRPMPM DTSVYESPYS DPEELKDKKL FLKRDNLLIA DIELGCGNFG SVRQGVYRMR
370 380 390 400 410 420
KKQIDVAIKV LKQGTEKADT EEMMREAQIM HQLDNPYIVR LIGVCQAEAL MLVMEMAGGG
430 440 450 460 470 480
PLHKFLVGKR EEIPVSNVAE LLHQVSMGMK YLEEKNFVHR DLAARNVLLV NRHYAKISDF
490 500 510 520 530 540
GLSKALGADD SYYTARSAGK WPLKWYAPEC INFRKFSSRS DVWSYGVTMW EALSYGQKPY
550 560 570 580 590 600
KKMKGPEVMA FIEQGKRMEC PPECPPELYA LMSDCWIYKW EDRPDFLTVE QRMRACYYSL
610
ASKVEGPPGS TQKAEAACA