P38919
Gene name |
EIF4A3 (DDX48, KIAA0111) |
Protein name |
Eukaryotic initiation factor 4A-III |
Names |
eIF-4A-III, eIF4A-III, ATP-dependent RNA helicase DDX48, ATP-dependent RNA helicase eIF4A-3, DEAD box protein 48, Eukaryotic initiation factor 4A-like NUK-34, Eukaryotic translation initiation factor 4A isoform 3, Nuclear matrix protein 265, NMP 265, hNMP 265 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:9775 |
EC number |
3.6.4.13: Acting on ATP; involved in cellular and subcellular movement |
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

21 structures for P38919
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
2HXY | X-ray | 330 A | A/B/C/D | 23-411 | PDB |
2HYI | X-ray | 230 A | C/I | 1-411 | PDB |
2J0Q | X-ray | 320 A | A/B | 2-411 | PDB |
2J0S | X-ray | 221 A | A | 2-411 | PDB |
2J0U | X-ray | 300 A | A/B | 38-411 | PDB |
2XB2 | X-ray | 340 A | A/X | 1-411 | PDB |
3EX7 | X-ray | 230 A | C/H | 1-411 | PDB |
4C9B | X-ray | 200 A | A | 1-411 | PDB |
5MQF | EM | 590 A | p | 1-411 | PDB |
5XJC | EM | 360 A | u | 1-411 | PDB |
5YZG | EM | 410 A | u | 1-411 | PDB |
6ICZ | EM | 300 A | u | 1-411 | PDB |
6QDV | EM | 330 A | 7 | 22-404 | PDB |
6YVH | X-ray | 319 A | H/J/K/L | 246-411 | PDB |
7A5P | EM | 500 A | y | 1-411 | PDB |
7W59 | EM | 360 A | u | 1-411 | PDB |
7W5A | EM | 360 A | u | 1-411 | PDB |
7W5B | EM | 430 A | u | 1-411 | PDB |
7ZNJ | EM | 240 A | A/F/K/a/f/k | 23-404 | PDB |
8C6J | EM | 280 A | 7 | 1-411 | PDB |
AF-P38919-F1 | Predicted | AlphaFoldDB |
134 variants for P38919
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
CA150727 VAR_071090 rs587777204 RCV000087740 |
270 | D>G | Richieri Costa-Pereira syndrome RCPS [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
CA294885798 rs1041900382 |
2 | A>E | No |
ClinGen TOPMed gnomAD |
|
CA8816285 rs11559243 |
4 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8816286 rs753725743 |
4 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8816281 rs759812869 |
6 | T>M | No |
ClinGen ExAC gnomAD |
|
rs537330257 CA8816283 |
6 | T>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA8816282 rs759812869 |
6 | T>R | No |
ClinGen ExAC gnomAD |
|
CA401346221 rs1425871135 |
7 | M>V | No |
ClinGen gnomAD |
|
rs771230686 CA8816279 |
8 | A>T | No |
ClinGen ExAC gnomAD |
|
CA8816278 rs749598271 |
8 | A>V | No |
ClinGen ExAC gnomAD |
|
rs1183927840 CA401346172 |
9 | T>A | No |
ClinGen TOPMed gnomAD |
|
CA8816276 rs199770425 |
9 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs199770425 CA401346159 |
9 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA8816272 rs758092979 |
10 | S>L | No |
ClinGen ExAC gnomAD |
|
CA401346126 rs1255525313 |
11 | G>R | No |
ClinGen gnomAD |
|
rs778474622 CA8816270 |
12 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750094584 CA8816271 |
12 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs374500712 CA8816269 |
13 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs371179642 CA8816268 |
16 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs752873377 CA8816265 |
18 | L>V | No |
ClinGen ExAC |
|
rs1398046847 CA401345946 |
19 | K>N | No |
ClinGen gnomAD |
|
rs1256304315 CA401345909 |
21 | E>K | No |
ClinGen TOPMed |
|
TCGA novel | 21 | E>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA401345850 rs146631753 CA8816263 |
23 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs767730035 CA8816264 |
23 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA401345818 rs1167145572 |
25 | K>R | No |
ClinGen gnomAD |
|
rs1413518243 CA401345719 |
29 | E>D | No |
ClinGen TOPMed gnomAD |
|
CA8816260 rs763285271 |
31 | S>N | No |
ClinGen ExAC gnomAD |
|
CA401345629 rs1236908125 |
33 | E>K | No |
ClinGen gnomAD |
|
rs1197412554 CA401345556 |
37 | T>I | No |
ClinGen gnomAD |
|
rs770239554 CA8816258 |
38 | P>A | No |
ClinGen ExAC gnomAD |
|
rs991158193 CA294885674 |
39 | T>M | No |
ClinGen TOPMed |
|
CA401345480 rs1158658467 |
43 | M>V | No |
ClinGen TOPMed |
|
rs1286394558 CA401345428 |
44 | G>D | No |
ClinGen gnomAD |
|
CA294885672 rs867796526 |
46 | R>W | No |
ClinGen gnomAD |
|
rs771577924 CA401345338 |
49 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA401345321 rs745326354 |
50 | L>M | No |
ClinGen ExAC gnomAD |
|
rs1295427326 CA401345246 |
54 | Y>N | No |
ClinGen gnomAD |
|
TCGA novel | 57 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 61 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 62 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA8816226 rs770539912 |
64 | I>V | No |
ClinGen ExAC gnomAD |
|
rs1163812388 CA401343479 |
68 | A>V | No |
ClinGen gnomAD |
|
rs1195385120 CA401343472 |
69 | I>V | No |
ClinGen gnomAD |
|
CA8816197 rs750459539 |
88 | K>Q | No |
ClinGen ExAC gnomAD |
|
rs757442778 CA8816195 |
94 | I>V | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs777906183 CA8816173 |
105 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs777906183 CA401341321 |
105 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA294881100 rs756516726 |
105 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA8816172 rs756516726 |
105 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA401341085 rs1168579869 |
114 | P>S | No |
ClinGen TOPMed |
|
CA8816170 rs768135698 |
120 | V>M | No |
ClinGen ExAC gnomAD |
|
CA401340727 rs1464257374 |
124 | K>Q | No |
ClinGen TOPMed |
|
TCGA novel | 125 | G>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs760226009 CA8816144 |
125 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs767246848 CA8816142 |
130 | G>S | No |
ClinGen ExAC gnomAD |
|
rs774286251 CA8816140 |
133 | M>I | No |
ClinGen ExAC gnomAD |
|
CA401339654 rs1429810861 |
133 | M>V | No |
ClinGen gnomAD |
|
rs367636849 CA8816139 |
134 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA294879867 rs367636849 |
134 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs749434367 CA8816138 |
135 | V>I | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 138 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1022458708 CA294879845 |
141 | I>T | No |
ClinGen Ensembl |
|
CA8816137 rs190180277 |
145 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8816135 rs748340572 |
148 | E>K | No |
ClinGen ExAC gnomAD |
|
rs781432256 CA8816134 |
156 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 158 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA401339045 rs1295627768 |
159 | V>A | No |
ClinGen gnomAD |
|
rs755298107 CA8816133 |
159 | V>I | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 160 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1261899180 CA401339024 |
161 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA401339012 rs1198756729 |
161 | A>V | No |
ClinGen gnomAD |
|
rs372677327 CA8816129 |
163 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs777174636 CA8816128 |
164 | P>S | No |
ClinGen ExAC gnomAD |
|
rs746409423 CA8816107 |
170 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs200525685 CA8816106 |
172 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1247723909 CA401338684 |
172 | R>H | No |
ClinGen gnomAD |
|
rs755596816 CA8816105 |
173 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs377598321 CA294879395 |
182 | K>E | No |
ClinGen ESP |
|
CA401338217 rs1159245310 |
192 | M>T | No |
ClinGen TOPMed |
|
rs1598604598 CA401337806 |
203 | D>G | No |
ClinGen Ensembl |
|
rs1173648982 CA401337813 |
203 | D>N | No |
ClinGen gnomAD |
|
rs1598604584 CA401337701 |
207 | Y>S | No |
ClinGen Ensembl |
|
rs764301358 CA8816072 |
217 | I>V | No |
ClinGen ExAC gnomAD |
|
CA401337393 rs911756594 |
219 | A>P | No |
ClinGen Ensembl |
|
CA294878714 rs911756594 |
219 | A>T | No |
ClinGen Ensembl |
|
CA401337369 rs1598604560 |
220 | T>P | No |
ClinGen Ensembl |
|
TCGA novel | 225 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 232 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA401336945 rs1598604540 |
234 | T>P | No |
ClinGen Ensembl |
|
CA401336922 rs1279042039 |
235 | D>Y | No |
ClinGen gnomAD |
|
rs1295310328 CA401336845 |
237 | I>S | No |
ClinGen gnomAD |
|
CA8816065 rs201917263 |
237 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA8816063 rs200424645 |
238 | R>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs11559244 CA401336817 |
238 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA294878594 rs11559244 |
238 | R>L | No |
ClinGen TOPMed gnomAD |
|
rs113268177 CA294878593 |
242 | K>R | No |
ClinGen Ensembl |
|
CA8816042 rs771670148 |
250 | G>V | No |
ClinGen ExAC gnomAD |
|
CA401335534 rs1245804026 |
252 | K>E | No |
ClinGen gnomAD |
|
CA401335327 rs1567848723 |
262 | E>Q | No |
ClinGen Ensembl |
|
TCGA novel | 268 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA401335137 rs1410106098 |
272 | Y>C | No |
ClinGen gnomAD |
|
CA401335035 rs1490903985 |
279 | Q>H | No |
ClinGen gnomAD |
|
CA8816032 rs751807674 |
280 | A>E | No |
ClinGen ExAC gnomAD |
|
rs751807674 CA8816033 |
280 | A>V | No |
ClinGen ExAC gnomAD |
|
CA8816010 rs202076147 |
294 | T>A | No |
ClinGen ExAC gnomAD |
|
rs762099502 CA8816009 |
294 | T>K | No |
ClinGen ExAC gnomAD |
|
rs762099502 CA401334708 |
294 | T>M | No |
ClinGen ExAC gnomAD |
|
rs764496207 CA8816007 |
295 | E>G | No |
ClinGen ExAC gnomAD |
|
CA8816006 rs759156126 |
296 | K>E | No |
ClinGen ExAC |
|
CA8816004 rs1555605223 |
297 | M>K | No |
ClinGen Ensembl |
|
CA294876990 rs763058081 |
307 | M>T | No |
ClinGen Ensembl |
|
CA8816000 rs772956229 |
314 | K>Q | No |
ClinGen ExAC gnomAD |
|
rs2039580889 RCV001346346 |
316 | R>W | No |
ClinVar dbSNP |
|
CA8815996 rs768473409 |
324 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs768473409 CA8815997 |
324 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs747890720 CA8815998 |
324 | R>W | No |
ClinGen ExAC gnomAD |
|
rs779973276 CA8815994 |
325 | S>L | No |
ClinGen ExAC gnomAD |
|
rs757676343 CA8815990 |
327 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1423240018 CA401333630 |
333 | S>A | No |
ClinGen gnomAD |
|
rs753145766 CA401333550 |
336 | V>F | No |
ClinGen ExAC gnomAD |
|
CA8815966 rs753145766 |
336 | V>I | No |
ClinGen ExAC gnomAD |
|
CA8815965 rs768076226 |
337 | W>C | No |
ClinGen ExAC gnomAD |
|
CA294875849 rs749441707 |
352 | Y>C | No |
ClinGen Ensembl |
|
CA401332756 rs1290668885 |
372 | G>S | No |
ClinGen TOPMed |
|
rs150484871 CA8815936 |
377 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA294875698 rs892982579 |
383 | N>S | No |
ClinGen TOPMed |
|
CA401332423 rs1198325251 |
387 | R>C | No |
ClinGen TOPMed |
|
rs1344598019 CA401332296 |
392 | I>T | No |
ClinGen gnomAD |
|
rs891076923 CA294875650 |
398 | T>I | No |
ClinGen TOPMed gnomAD |
|
rs867120581 CA294875649 |
404 | P>S | No |
ClinGen Ensembl |
|
TCGA novel | 405 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA294875046 rs200104923 |
410 | L>P | No |
ClinGen 1000Genomes |
|
rs867413953 CA294875029 |
412 | I>L | No |
ClinGen Ensembl |
No associated diseases with P38919
7 regional properties for P38919
Type | Name | Position | InterPro Accession |
---|---|---|---|
repeat | Leucine-rich repeat | 48 - 69 | IPR001611 |
repeat | WD40 repeat | 377 - 434 | IPR001680-1 |
repeat | WD40 repeat | 437 - 487 | IPR001680-2 |
repeat | WD40 repeat | 490 - 531 | IPR001680-3 |
repeat | WD40 repeat | 541 - 580 | IPR001680-4 |
conserved_site | WD40 repeat, conserved site | 517 - 531 | IPR019775 |
repeat | Leucine rich repeat 4 | 48 - 82 | IPR025875 |
Functions
Description | ||
---|---|---|
EC Number | 3.6.4.13 | Acting on ATP; involved in cellular and subcellular movement |
Subcellular Localization |
|
|
PANTHER Family | ||
PANTHER Subfamily | ||
PANTHER Protein Class | ||
PANTHER Pathway Category | No pathway information available |
14 GO annotations of cellular component
Name | Definition |
---|---|
catalytic step 2 spliceosome | A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs. |
cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
dendrite | A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body. |
exon-exon junction complex | A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay. |
glutamatergic synapse | A synapse that uses glutamate as a neurotransmitter. |
membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
neuronal cell body | The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites. |
nuclear speck | A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy. |
nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
postsynaptic cytosol | The region of the cytosol consisting of all cytosol that is part of the postsynapse. |
U2-type catalytic step 1 spliceosome | A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs. |
10 GO annotations of molecular function
Name | Definition |
---|---|
ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
poly(A) binding | Binding to a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA. |
ribonucleoprotein complex binding | Binding to a complex of RNA and protein. |
RNA binding | Binding to an RNA molecule or a portion thereof. |
RNA helicase activity | Unwinding of an RNA helix, driven by ATP hydrolysis. |
RNA stem-loop binding | Binding to a stem-loop in an RNA molecule. An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop. |
selenocysteine insertion sequence binding | Binding to a selenocysteine insertion sequence (SECIS), a regulatory sequence within mRNA which directs incorporation of a selenocysteine at a stop codon (UGA) during translation. |
translation regulator activity | Any molecular function involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome. |
17 GO annotations of biological process
Name | Definition |
---|---|
associative learning | Learning by associating a stimulus (the cause) with a particular outcome (the effect). |
cellular response to brain-derived neurotrophic factor stimulus | A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brain-derived neurotrophic factor stimulus. |
cellular response to selenite ion | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a selenite ion stimulus. |
embryonic cranial skeleton morphogenesis | The process in which the anatomical structures of the cranial skeleton are generated and organized during the embryonic phase. |
exploration behavior | The specific behavior of an organism in response to a novel environment or stimulus. |
mRNA export from nucleus | The directed movement of mRNA from the nucleus to the cytoplasm. |
mRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. |
negative regulation of excitatory postsynaptic potential | Any process that prevents the establishment or decreases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential. |
negative regulation of selenocysteine incorporation | Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine incorporation. |
negative regulation of selenocysteine insertion sequence binding | Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine insertion sequence binding. |
negative regulation of translation | Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. |
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins. |
positive regulation of translation | Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. |
regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. |
regulation of translation at postsynapse, modulating synaptic transmission | Any process that modulates synaptic transmission by regulating translation occurring at the postsynapse. |
response to organic cyclic compound | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic compound stimulus. |
rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
22 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q12099 | FAL1 | ATP-dependent RNA helicase FAL1 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
Q2NL22 | EIF4A3 | Eukaryotic initiation factor 4A-III | Bos taurus (Bovine) | PR |
Q5ZM36 | EIF4A3 | Eukaryotic initiation factor 4A-III | Gallus gallus (Chicken) | PR |
Q9VHS8 | CG7483 | Eukaryotic initiation factor 4A-III | Drosophila melanogaster (Fruit fly) | PR |
Q9NQI0 | DDX4 | Probable ATP-dependent RNA helicase DDX4 | Homo sapiens (Human) | SS |
O15523 | DDX3Y | ATP-dependent RNA helicase DDX3Y | Homo sapiens (Human) | SS |
O00571 | DDX3X | ATP-dependent RNA helicase DDX3X | Homo sapiens (Human) | EV |
Q9UHL0 | DDX25 | ATP-dependent RNA helicase DDX25 | Homo sapiens (Human) | PR |
Q9UMR2 | DDX19B | ATP-dependent RNA helicase DDX19B | Homo sapiens (Human) | PR |
Q9NUU7 | DDX19A | ATP-dependent RNA helicase DDX19A | Homo sapiens (Human) | PR |
P17844 | DDX5 | Probable ATP-dependent RNA helicase DDX5 | Homo sapiens (Human) | PR |
O00148 | DDX39A | ATP-dependent RNA helicase DDX39A | Homo sapiens (Human) | PR |
Q13838 | DDX39B | Spliceosome RNA helicase DDX39B | Homo sapiens (Human) | PR |
Q9UJV9 | DDX41 | Probable ATP-dependent RNA helicase DDX41 | Homo sapiens (Human) | PR |
Q91VC3 | Eif4a3 | Eukaryotic initiation factor 4A-III | Mus musculus (Mouse) | PR |
A6M931 | EIF4A3 | Eukaryotic initiation factor 4A-III | Sus scrofa (Pig) | PR |
Q3B8Q2 | Eif4a3 | Eukaryotic initiation factor 4A-III | Rattus norvegicus (Rat) | PR |
Q10I26 | EIF4A3B | Eukaryotic initiation factor 4A-III homolog B | Oryza sativa subsp japonica (Rice) | PR |
Q5VNM3 | EIF4A3A | Eukaryotic initiation factor 4A-III homolog A | Oryza sativa subsp japonica (Rice) | PR |
Q94A52 | EIF4A3 | Eukaryotic initiation factor 4A-III homolog | Arabidopsis thaliana (Mouse-ear cress) | PR |
B7ZTW1 | eif4a3 | Eukaryotic initiation factor 4A-III | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
Q7ZVA6 | eif4a3 | Eukaryotic initiation factor 4A-III | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
10 | 20 | 30 | 40 | 50 | 60 |
MATTATMATS | GSARKRLLKE | EDMTKVEFET | SEEVDVTPTF | DTMGLREDLL | RGIYAYGFEK |
70 | 80 | 90 | 100 | 110 | 120 |
PSAIQQRAIK | QIIKGRDVIA | QSQSGTGKTA | TFSISVLQCL | DIQVRETQAL | ILAPTRELAV |
130 | 140 | 150 | 160 | 170 | 180 |
QIQKGLLALG | DYMNVQCHAC | IGGTNVGEDI | RKLDYGQHVV | AGTPGRVFDM | IRRRSLRTRA |
190 | 200 | 210 | 220 | 230 | 240 |
IKMLVLDEAD | EMLNKGFKEQ | IYDVYRYLPP | ATQVVLISAT | LPHEILEMTN | KFMTDPIRIL |
250 | 260 | 270 | 280 | 290 | 300 |
VKRDELTLEG | IKQFFVAVER | EEWKFDTLCD | LYDTLTITQA | VIFCNTKRKV | DWLTEKMREA |
310 | 320 | 330 | 340 | 350 | 360 |
NFTVSSMHGD | MPQKERESIM | KEFRSGASRV | LISTDVWARG | LDVPQVSLII | NYDLPNNREL |
370 | 380 | 390 | 400 | 410 | |
YIHRIGRSGR | YGRKGVAINF | VKNDDIRILR | DIEQYYSTQI | DEMPMNVADL | I |