P35221
Gene name |
CTNNA1 |
Protein name |
Catenin alpha-1 |
Names |
Alpha E-catenin, Cadherin-associated protein, Renal carcinoma antigen NY-REN-13 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:1495 |
EC number |
|
Protein Class |
ALPHA CATENIN (PTHR18914) |

Descriptions
Catenin alpha-1 (CTNNA1, αE-catenin) is an F-actin binding protein and a homolog of vinculin, which is autoinhibited through a head-tail interaction. It plays a crucial role in cell-cell adhesion by serving as a vital link between cadherin/β-catenin complexes and the underlying actin cytoskeleton. In contrast to vinculin, CTNNA1 did not show a similar head-tail interaction-mediated autoinhibited conformation. The linker region preceding the F-actin binding domain (FABD) forms an α-helix that restricts the flexibility of FABD in monomeric CTNNA1. The middle (M) region regulates the vinculin-binding site within the M region by its subdomains. The M domain salt bridge stabilizes the autoinhibited state of the vinculin-binding site in the absence of junctional tension. The rearrangement of MII and MIII subdomains releases the autoinhibited conformation of CTNNA1, and R551A and D503N mutations destabilize the autoinhibited αE-catenin by exposing vinculin-binding site.
Autoinhibitory domains (AIDs)
Target domain |
669-863 (F-actin binding domain) |
Relief mechanism |
Partner binding |
Assay |
Mutagenesis experiment, Structural analysis |
Target domain |
277-393 (Vinculin-binding domain) |
Relief mechanism |
|
Assay |
Mutagenesis experiment, Structural analysis |
Accessory elements
No accessory elements
References
- Yeon JH et al. (2016) "Systems-wide Identification of cis-Regulatory Elements in Proteins", Cell systems, 2, 89-100
- Rangarajan ES et al. (2023) "Distinct inter-domain interactions of dimeric versus monomeric α-catenin link cell junctions to filaments", Communications biology, 6, 276
- Barrick S et al. (2018) "Salt bridges gate α-catenin activation at intercellular junctions", Molecular biology of the cell, 29, 111-122
- Li J et al. (2015) "Structural Determinants of the Mechanical Stability of α-Catenin", The Journal of biological chemistry, 290, 18890-903
- Heier JA et al. (2021) "Distinct intramolecular interactions regulate autoinhibition of vinculin binding in αT-catenin and αE-catenin", The Journal of biological chemistry, 296, 100582
Autoinhibited structure

Activated structure

8 structures for P35221
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
1H6G | X-ray | 220 A | A/B | 377-632 | PDB |
4EHP | X-ray | 266 A | B | 277-382 | PDB |
4IGG | X-ray | 366 A | A/B | 82-906 | PDB |
6UPV | EM | 320 A | L/M | 1-906 | PDB |
6V2O | X-ray | 127 A | C | 850-859 | PDB |
6V2P | X-ray | 130 A | C | 850-859 | PDB |
7UTJ | EM | 277 A | G/H/I/K/L/Z | 22-906 | PDB |
AF-P35221-F1 | Predicted | AlphaFoldDB |
830 variants for P35221
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
RCV001011914 CA361477045 rs1580977954 RCV002551751 |
5 | H>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA3431329 RCV001012793 rs776783618 RCV001057956 |
6 | A>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000802612 rs1035752743 RCV002424857 CA128716439 |
9 | I>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV002327662 RCV001303666 rs988942117 |
15 | P>L | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV002339602 CA361477121 rs1276738001 RCV001224631 |
16 | K>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV001220886 RCV002348738 rs1755160879 |
18 | L>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV002357200 RCV001349150 rs1755161812 |
19 | E>D | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs1561520304 RCV001075593 RCV000823543 CA361477147 RCV002352472 |
20 | I>F | Hereditary cancer-predisposing syndrome Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV001039296 RCV002372765 rs1755163589 |
24 | A>E | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA361477304 RCV000812936 rs1580984043 RCV002381811 |
43 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA3431364 RCV001202348 rs751978245 RCV002379760 |
46 | G>W | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV002390663 CA361477339 rs1580984089 RCV000816893 |
48 | S>F | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV001215374 RCV002402644 rs1755328571 |
51 | K>N | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001324820 RCV002402908 rs1755328383 |
51 | K>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV000797284 RCV003166152 rs762712870 |
51 | K>missing | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV002393601 RCV001237097 rs1755328949 |
53 | G>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
VAR_076586 rs781520852 RCV001012405 RCV001043514 CA3431367 |
54 | R>C | Variant assessed as Somatic; 0.0 impact. Hereditary cancer-predisposing syndrome MDPT2; no effect on VCL-binding [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs781520852 CA128716555 RCV001040736 RCV002400241 |
54 | R>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002402428 RCV001059776 CA3431368 rs746153198 |
54 | R>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002402762 RCV001240575 rs1755330097 |
56 | K>E | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs780078260 RCV002397687 RCV000814724 CA3431370 |
58 | A>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA3431374 rs748087788 RCV000818821 RCV002406875 |
65 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs869312766 RCV000210185 |
66 | E>missing | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV002418806 rs369216126 RCV001234449 CA3431377 |
67 | Q>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
CA3431375 RCV000794542 rs772061558 RCV002422697 |
67 | Q>K | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002422814 RCV000814661 CA3431378 rs766078636 |
68 | A>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000799012 CA361477548 RCV002442649 rs1580984484 |
78 | K>E | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs1580984502 RCV001321246 RCV001015224 CA361477549 |
78 | K>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA361477571 RCV000810814 RCV002424902 rs200135015 |
80 | A>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
CA3431381 RCV002453885 rs200135015 RCV000821131 |
80 | A>V | Variant assessed as Somatic; 0.0 impact. Hereditary cancer-predisposing syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV000792749 CA3431385 RCV001015683 rs750796277 |
83 | S>N | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001073498 rs768434342 RCV002440722 RCV000806689 |
87 | K>missing | Hereditary cancer-predisposing syndrome Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
rs756417618 RCV002427043 RCV000819643 CA361477632 |
87 | K>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs1755340811 RCV002438730 RCV001320644 |
91 | V>A | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA361477672 rs1483366405 RCV001219387 RCV003163687 |
93 | A>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
rs1755342159 RCV001218110 RCV002436837 |
94 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV002440747 RCV000810775 rs1580984812 CA361477688 |
95 | E>D | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV001313590 CA3431394 rs772151551 RCV002438702 |
96 | D>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA3431395 RCV001062438 RCV002436647 rs773235871 |
98 | R>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
COSM1433413 RCV001017615 RCV000791893 rs746832628 CA3431396 |
98 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine Hereditary cancer-predisposing syndrome [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs746920603 RCV001018946 CA3431418 RCV000818351 |
106 | A>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002322253 rs1758516450 RCV001325715 |
110 | E>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV003169010 rs762477632 RCV000820658 CA3431424 |
112 | A>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000799023 CA3431426 RCV002458448 RCV002275135 rs773771416 |
113 | D>E | Polyposis syndrome, hereditary mixed, 1 Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs768136600 CA3431425 RCV001069296 RCV002451302 |
113 | D>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP |
RCV001020425 RCV001067634 CA361122963 rs1455080825 |
116 | C>W | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
rs761084210 RCV002477810 RCV001020401 RCV000795830 CA3431427 |
116 | C>Y | Hereditary cancer-predisposing syndrome Patterned macular dystrophy 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002453816 rs766845544 RCV000807757 CA3431428 |
117 | S>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000795221 rs766845544 CA361122967 RCV001020484 |
117 | S>F | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001759954 rs1043413100 RCV001042239 |
121 | R>* | Patterned macular dystrophy 2 [ClinVar] | Yes |
ClinVar dbSNP |
CA3431430 RCV001020757 RCV001052007 rs749878552 |
121 | R>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001020938 rs765587517 CA3431431 RCV000793291 |
124 | M>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs371054484 RCV001320891 RCV003166855 CA361123100 |
126 | R>P | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000792921 RCV002360913 CA3431432 rs371054484 |
126 | R>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001044997 rs1758522652 RCV002355010 |
129 | R>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs777986786 CA3431434 RCV000819822 RCV002372335 |
135 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001021801 rs1581105774 RCV000791821 |
136 | T>missing | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV002320283 rs1758526073 RCV001051058 |
136 | T>N | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs922655280 RCV002325545 CA128219058 RCV000802156 |
136 | T>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV000472749 RCV002323717 rs374142395 CA3431438 |
137 | R>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000459742 RCV001021859 rs781124226 CA3431437 |
137 | R>W | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001212435 rs1295022308 RCV002327492 |
143 | D>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV002332642 RCV000805095 rs748930609 CA3431441 |
144 | M>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV003163695 rs1758530496 RCV001220254 |
145 | A>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA361123624 rs1015730449 RCV002327679 RCV001307807 |
149 | K>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV000792195 CA3431467 RCV002334467 rs533573408 |
159 | D>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
RCV003166169 CA361124899 RCV000798622 rs1415757253 |
160 | G>D | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV001049364 RCV002339250 rs1292294409 CA361124909 |
161 | I>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV002339674 RCV001243122 rs1758892317 |
165 | R>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs1758892567 RCV003160553 RCV001067111 |
166 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs139770883 RCV001023459 CA3431468 RCV000803473 |
168 | G>D | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV000812082 RCV002336671 rs778667305 CA3431469 |
169 | N>D | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA361125120 RCV001209435 rs1581119386 RCV001023493 |
169 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs761836161 CA361125237 RCV001360973 RCV001023733 |
174 | G>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA361125282 rs1581119469 RCV000806536 RCV002345817 |
176 | Q>* | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV001304798 CA361125312 RCV001023897 rs1581119483 |
177 | Y>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs1758897080 RCV002348436 RCV001059944 |
179 | A>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
VAR_022303 rs28363394 CA3431473 RCV001023984 RCV001821358 RCV000465647 |
179 | A>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001347744 CA361125365 rs750396607 RCV002350643 |
180 | L>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001024169 rs1581119562 RCV000819817 CA361125438 |
183 | E>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV002345795 rs1448027258 CA361125457 RCV000803124 |
184 | V>A | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
rs1758900291 RCV002348415 RCV001055673 |
186 | K>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001024351 RCV001218313 CA3431478 rs754728195 |
188 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV001322948 RCV002350596 rs1758902518 |
190 | M>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001024769 RCV000810618 rs900896772 CA128228909 |
200 | D>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV001059975 rs1760440516 RCV002355061 |
203 | H>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA16611784 RCV000470939 RCV001024869 rs1060502218 |
203 | H>Y | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV002356988 CA3431509 RCV001229985 rs748407995 |
204 | R>C | Variant assessed as Somatic; 0.0 impact. Hereditary cancer-predisposing syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
RCV002352382 rs1025792545 RCV000806114 CA128228922 |
204 | R>H | Variant assessed as Somatic; 0.0 impact. Hereditary cancer-predisposing syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
RCV002352419 rs1250763367 RCV000813232 CA361129446 |
205 | D>N | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
rs150893072 RCV000226477 RCV001024985 CA3431512 |
206 | Q>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
CA3431514 RCV002501094 RCV001025197 rs201391408 RCV000808831 |
213 | I>V | Patterned macular dystrophy 2 Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs1397480575 RCV000820656 RCV003169009 |
216 | K>missing | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV000800627 RCV002352357 rs1213476232 CA361129579 |
217 | N>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs752549253 CA3431517 RCV001358861 RCV001025375 |
218 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV000807424 rs752549253 CA361129596 RCV001025377 |
218 | V>L | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV002360975 rs369265386 RCV000806225 CA3431519 |
219 | P>L | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
VAR_022304 RCV001025410 RCV000863897 rs28363406 CA3431518 |
219 | P>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs1760448767 RCV001235911 RCV002375248 |
220 | I>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA3431524 COSM3661435 RCV002365708 RCV001055032 rs755524897 |
222 | Y>C | liver Hereditary cancer-predisposing syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
RCV001204944 RCV001025523 CA361129647 rs1251595713 |
223 | T>A | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA361129656 rs1166971890 RCV001042468 RCV002363583 |
224 | A>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
CA3431531 rs570687363 RCV002365972 RCV001215897 |
234 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
RCV000806397 CA361129781 RCV002360978 rs548392885 |
235 | A>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA3431533 rs548392885 RCV000818654 RCV002372324 |
235 | A>T | Variant assessed as Somatic; 0.0 impact. Hereditary cancer-predisposing syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
CA361129783 RCV002363091 RCV000810446 RCV001075557 rs1461611114 |
235 | A>V | Hereditary cancer-predisposing syndrome Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA3431536 rs751967797 RCV002363080 RCV000808143 |
237 | Y>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001203935 CA3431537 rs774201046 RCV002365917 |
238 | K>E | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002365699 CA3431538 rs761564837 RCV001052618 |
238 | K>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV001217792 RCV001026140 rs749980248 CA361129835 |
240 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs1760458725 RCV002375409 RCV001317738 |
241 | R>K | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs371337206 CA3431545 RCV001026252 RCV000819994 |
244 | I>L | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV002381859 RCV000820052 CA361129889 rs1581167854 |
245 | Y>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV000809856 RCV001026297 rs757481572 CA3431547 |
245 | Y>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002381784 RCV000807603 CA3431548 rs781342935 |
246 | K>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA361129900 rs1442390605 RCV000823151 RCV003169049 |
246 | K>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
CA361129941 rs1581167912 RCV000803596 RCV003166232 |
252 | V>A | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA3431555 rs78627784 RCV000809488 RCV001026742 |
257 | N>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001026739 CA3431554 RCV000863626 rs78627784 |
257 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV000803282 CA361129973 RCV002397625 rs1581167987 |
258 | A>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV001206587 RCV002411759 CA128229141 rs1043277546 |
260 | Q>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV002422736 RCV001026995 RCV001065973 RCV000800230 CA3431559 CA361130060 rs148239804 |
265 | D>E | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV002497426 RCV001056396 rs1760467219 |
265 | D>Y | Patterned macular dystrophy 2 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001062562 RCV002418527 rs911099877 CA128229150 |
266 | D>N | Hereditary cancer-predisposing syndrome Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
CA3431561 RCV000817114 RCV001027156 rs199867969 |
270 | H>Y | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001223676 CA361130146 rs1241420353 RCV002418772 |
272 | G>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV000819742 rs758909445 RCV001027349 |
276 | G>missing | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001223578 CA361130256 RCV002436868 rs1427235870 |
280 | Y>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs890236162 RCV000810401 RCV002440745 CA128229183 |
280 | Y>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV001045811 RCV002445246 CA361130293 rs1355879925 |
283 | N>D | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV001042303 RCV001018590 CA3431590 rs765248090 |
300 | R>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs369518072 CA3431591 RCV000795728 RCV002370083 |
300 | R>H | Variant assessed as Somatic; 0.0 impact. Hereditary cancer-predisposing syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs1760848495 RCV003135953 RCV001309183 |
307 | E>missing | Hereditary diffuse gastric adenocarcinoma [ClinVar] | Yes |
ClinVar dbSNP |
CA358865 rs869320697 VAR_076587 RCV000210750 |
307 | E>K | Patterned macular dystrophy 2 MDPT2; no effect on VCL-binding [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV001019038 CA3431592 RCV000862020 rs202131041 |
308 | R>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV000801004 rs376445678 RCV002370116 CA3431593 COSM50770 |
308 | R>H | large_intestine Hereditary cancer-predisposing syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000210752 VAR_076588 rs869320696 CA358867 |
318 | L>S | Patterned macular dystrophy 2 MDPT2; no effect on VCL-binding [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
RCV001213598 RCV003163628 rs1760851474 |
321 | D>N | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
COSM482013 CA361131003 RCV002383975 RCV000801850 rs1554085478 RCV001197574 RCV000504773 |
322 | S>L | kidney Patterned macular dystrophy 2 Hereditary cancer-predisposing syndrome Variant assessed as Somatic; impact. Retinal dystrophy [Cosmic, ClinVar, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar Ensembl NCI-TCGA dbSNP |
rs1581178471 RCV002377411 RCV001324182 |
325 | T>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV000816733 CA361131062 RCV002372309 rs1581178503 |
328 | D>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA361131076 RCV002381779 RCV000806539 rs1337385989 |
329 | R>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA3431600 rs373717420 RCV000815342 RCV002381827 |
329 | R>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV002386396 CA3431601 RCV000795858 rs376523339 |
330 | R>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV002381886 CA361131102 rs1215333067 RCV000824398 |
332 | R>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs1581178626 RCV002442704 CA361131203 RCV000808109 |
341 | R>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs1760858446 RCV002395706 RCV001322013 |
345 | Q>* | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA3431607 rs201056930 RCV002400272 RCV001048424 |
349 | S>L | Variant assessed as Somatic; 0.0 impact. Hereditary cancer-predisposing syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV001051862 CA3431610 RCV002400297 rs777714654 |
354 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV001017186 rs758561244 RCV001047715 COSM3409765 CA3431858 |
357 | R>C | Variant assessed as Somatic; 0.0 impact. Hereditary cancer-predisposing syndrome central_nervous_system [NCI-TCGA, ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV001017199 RCV000803768 rs192686066 CA3431859 |
357 | R>H | Variant assessed as Somatic; 0.0 impact. Hereditary cancer-predisposing syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
CA128237365 rs990885234 RCV001234935 RCV002430005 |
361 | S>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV002429648 rs1294061925 CA361132519 RCV001052167 |
362 | D>E | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV001216841 rs1354521948 CA361132554 RCV002429923 |
368 | I>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV000815093 RCV002433978 rs1581474221 CA361132566 |
369 | D>E | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV002547523 RCV001351290 CA361132634 rs773022966 |
379 | R>G | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs760356703 RCV002325517 RCV000796264 COSM1061460 CA3431863 |
379 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine Hereditary cancer-predisposing syndrome endometrium [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV001017467 rs779064875 CA128238099 RCV001320380 |
383 | R>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
CA3431875 RCV002451201 rs780380304 RCV001049312 COSM172964 |
383 | R>H | large_intestine Hereditary cancer-predisposing syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
RCV001222288 CA361132920 rs1163870840 RCV002348742 |
385 | A>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
CA3431878 RCV000824037 rs774427164 RCV001010115 |
390 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs1754339244 TCGA novel RCV002339574 RCV001218550 |
393 | S>Y | Hereditary cancer-predisposing syndrome Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinVar NCI-TCGA dbSNP |
rs773003463 RCV000801367 RCV002336608 CA3431880 |
398 | N>D | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs773003463 CA361133040 RCV002336614 RCV000802192 |
398 | N>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs200549409 CA3431881 RCV000814518 RCV001010169 |
398 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs766086208 RCV002339279 RCV001055846 CA3431882 |
399 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV002348467 rs1754343104 RCV001067131 |
402 | L>W | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV000819178 CA3431883 RCV001010307 rs760179421 |
403 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs1257372712 RCV000824521 CA361133080 RCV002352475 |
404 | L>F | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV001348319 RCV002357196 CA361133087 rs1194900939 |
405 | I>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV001240502 RCV001074828 CA128238192 RCV002355106 rs992713245 |
407 | A>V | Hereditary cancer-predisposing syndrome Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV001212159 rs1754354782 RCV002411782 |
420 | A>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA3431889 RCV000794653 rs531171999 RCV002442625 |
424 | R>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
RCV000797396 rs1424890664 RCV001010659 CA361133219 |
424 | R>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs1754361470 RCV001073862 |
427 | A>V | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
RCV001051705 rs1396302901 RCV002379550 CA361133247 |
428 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs1311867806 RCV001212622 CA361133254 RCV002379804 |
429 | K>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV002379811 rs1754363697 RCV001214346 |
431 | I>missing | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
VAR_076589 RCV002381724 rs755215402 CA357855 RCV000210749 |
431 | I>M | Hereditary cancer-predisposing syndrome Patterned macular dystrophy 2 MDPT2; no effect on VCL-binding [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
rs754174029 CA3431892 RCV001305006 RCV001010794 |
431 | I>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV002379865 rs1758706957 RCV001226359 |
434 | A>P | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001069892 CA3431913 rs752913534 RCV002379619 |
435 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV000867733 CA3431914 rs138782455 RCV001010896 |
437 | A>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV002381774 rs769696803 CA361135926 RCV000806127 |
443 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002379846 rs1758714737 RCV001223782 |
445 | E>missing | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV000821413 rs762698589 CA3431922 RCV002381866 |
447 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV002381837 COSM274692 CA128250555 RCV000816829 rs201498915 |
451 | R>* | large_intestine Hereditary cancer-predisposing syndrome Variant assessed as Somatic; impact. endometrium [Cosmic, ClinVar, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA TOPMed dbSNP |
CA3431924 RCV002386429 rs773756164 RCV000802068 |
451 | R>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV002381825 COSM3720275 CA3431926 rs776209866 RCV000815165 CA361135984 |
452 | M>I | Hereditary cancer-predisposing syndrome haematopoietic_and_lymphoid_tissue [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ExAC gnomAD ClinVar dbSNP |
rs372832887 RCV003169649 RCV001343501 |
452 | M>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV002386407 rs777109167 RCV000797784 CA3431927 |
454 | A>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002379779 rs1338186632 RCV001205523 CA361136034 |
460 | L>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
rs1758725828 RCV001313931 RCV002384392 |
461 | C>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV002388520 CA128250562 rs977288078 RCV000806478 |
462 | P>L | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
CA361137022 rs1580799102 RCV000813606 RCV002390645 |
464 | V>F | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV002391121 CA3431950 RCV001041404 rs775868066 |
465 | I>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV000815387 rs764267687 CA3431952 RCV002390652 |
466 | N>D | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
CA361137066 RCV000803138 rs1580799224 RCV003166224 |
468 | A>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA361137213 RCV001042012 RCV002391123 rs1465950903 |
484 | M>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV000815137 rs780099178 CA3431958 RCV001011726 |
490 | Q>L | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001346666 RCV002275358 rs1762114658 |
493 | K>missing | Polyposis syndrome, hereditary mixed, 1 [ClinVar] | Yes |
ClinVar dbSNP |
RCV000816832 rs1356240181 CA361137287 RCV001011803 |
494 | Q>K | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV000818642 rs754789006 RCV002390678 CA3431960 |
496 | R>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs1060502219 RCV001325305 RCV002393128 CA16611821 |
502 | V>L | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV002395686 rs1762132582 RCV001318622 |
508 | I>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001293821 rs1762133912 |
509 | D>* | Colorectal cancer [ClinVar] | Yes |
ClinVar dbSNP |
RCV002402624 rs1762137635 RCV001210574 |
514 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001012365 rs759542721 RCV001063989 CA3431996 |
533 | K>N | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs1353833789 CA361131833 RCV000800931 RCV002397616 |
539 | D>E | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV002397589 CA361131829 rs547329141 RCV000795799 |
539 | D>Y | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP |
rs1580854940 RCV002397599 RCV000798703 |
540 | R>missing | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs1203968888 COSM1433433 RCV000819369 RCV002397712 CA361131837 |
540 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine Hereditary cancer-predisposing syndrome [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA dbSNP gnomAD |
RCV000806498 CA3431999 rs139655691 COSM3237698 RCV002478866 RCV002388521 |
540 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine Patterned macular dystrophy 2 Hereditary cancer-predisposing syndrome [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
RCV002400267 RCV001046542 rs139655691 |
540 | R>P | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV002402847 RCV001303888 rs1763609491 |
545 | I>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA16611880 rs1060502220 RCV001350499 RCV003168809 |
545 | I>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV001224173 rs1763609978 RCV002402698 |
546 | R>* | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs1348963276 CA361131872 RCV000809730 RCV002390627 |
546 | R>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV002400316 CA3432001 RCV001055260 rs143060269 |
548 | R>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
RCV001300933 rs146151753 RCV003166692 |
554 | H>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001061949 CA3432002 RCV002402438 rs756832179 |
554 | H>Y | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA3432004 RCV002397600 rs201877485 RCV000799122 |
555 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
CA361131937 rs1580855501 RCV001012660 RCV000791541 |
557 | T>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs1383466662 RCV002397592 CA361131946 RCV000796181 |
559 | E>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV000797906 rs769235447 CA3432005 RCV002397597 |
560 | M>L | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP |
RCV002402778 RCV001244343 rs1763622007 |
561 | D>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA3432007 rs748595002 RCV002409393 RCV001041137 |
562 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002402270 RCV000469822 CA3432008 rs772560994 |
563 | Y>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV001343598 rs1335939570 CA361131991 RCV001012773 |
565 | P>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV002402881 CA3432010 rs747249507 RCV001315877 |
571 | K>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV001535745 rs1580855958 RCV002408976 CA361132061 RCV000820479 |
576 | T>A | Hereditary cancer-predisposing syndrome Patterned macular dystrophy 2 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA3432012 rs139134468 RCV000804945 RCV002397635 |
581 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV001068693 rs1296205201 CA361132137 RCV002411603 |
586 | R>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV001215654 rs1325651636 RCV002411796 CA361132140 |
586 | R>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV001220704 rs1763769197 RCV002402666 |
588 | T>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs1274677659 RCV001205156 CA361132174 RCV002402590 |
591 | V>A | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
rs540697892 CA3432032 RCV003166240 RCV000804773 |
591 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
rs1211833493 CA361132193 COSM204812 RCV003169650 RCV001343502 |
594 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine Hereditary cancer-predisposing syndrome [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA dbSNP gnomAD |
CA128217504 RCV001205800 RCV002411757 rs757780458 |
595 | V>M | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV001041201 RCV002400244 rs1763774286 |
597 | A>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA3432037 RCV002408977 rs761567176 RCV000820674 |
600 | S>L | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002412082 CA128217514 RCV001344869 rs191687307 |
600 | S>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes TOPMed dbSNP gnomAD |
RCV001203149 RCV002411742 CA3432039 rs543603775 |
602 | P>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs1042043013 RCV000804451 RCV002406790 CA128217564 |
604 | Q>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV001051922 CA3432040 rs755724779 RCV002409433 |
604 | Q>K | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs1580861711 CA361132255 RCV002406721 RCV000791612 |
605 | P>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs1763786362 RCV002411869 RCV001234567 |
613 | D>E | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001303444 rs781540605 RCV002411964 CA3432047 |
616 | R>H | Variant assessed as Somatic; 0.0 impact. Hereditary cancer-predisposing syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
RCV003160344 rs1207363850 CA361132344 RCV001045889 |
618 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV001202938 rs1207363850 RCV002411739 |
618 | V>L | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV003169753 rs1192687150 CA361132415 RCV001352522 |
628 | A>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
rs1764793973 RCV002411880 RCV001238355 |
636 | E>K | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001013795 rs139529481 CA3432074 RCV000821462 |
648 | F>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs1003481327 RCV001235364 RCV002418809 COSM1202581 CA128220934 |
654 | T>M | large_intestine Hereditary cancer-predisposing syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar TOPMed dbSNP |
RCV001059291 rs564390551 RCV001013890 CA3432077 |
656 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
rs1764805365 RCV002419008 RCV001342202 |
657 | Q>* | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001352297 RCV002420766 rs1764809610 |
665 | A>missing | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs1580896544 CA361132913 RCV001013960 |
665 | A>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA361133319 rs1580907792 RCV002422690 RCV000793962 RCV003141775 RCV001074413 |
675 | Q>* | Hereditary diffuse gastric adenocarcinoma Hereditary cancer-predisposing syndrome Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV003160466 CA361133652 RCV001057911 rs1263470557 |
721 | M>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV002509555 RCV002427020 rs1401839892 RCV000816771 CA361133730 |
731 | R>* | Variant assessed as Somatic; 0.0 impact. Hereditary cancer-predisposing syndrome CTNNA1-associated FEVR [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
RCV000464946 RCV001014759 rs1022043882 CA16611789 |
735 | P>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV001350866 CA361133851 rs1254765947 RCV003169739 |
748 | K>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
CA3432174 RCV002442671 rs760684787 RCV000802971 |
782 | R>C | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002447133 rs1215571495 RCV001226016 CA361134489 |
799 | E>K | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
RCV000821242 RCV001323547 COSM1061471 CA361134531 RCV002453888 rs1297469358 |
805 | G>R | Hereditary cancer-predisposing syndrome Variant assessed as Somatic; impact. endometrium [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA TOPMed dbSNP |
CA361134569 RCV001066447 rs1373407335 RCV002451287 |
811 | G>R | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
RCV002429920 RCV001216029 rs1765968933 |
816 | M>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV001015698 RCV000796840 rs781450977 CA3432252 |
831 | Q>H | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA3432254 rs377477287 RCV000822146 RCV002453893 |
835 | A>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
RCV000804014 CA128225466 rs1054245968 RCV001015738 |
838 | V>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
RCV000805169 RCV002424871 CA3432261 rs771672517 |
841 | T>N | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV000822067 rs1580945247 RCV002434017 CA361135462 |
852 | L>F | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV000815250 RCV002427011 rs199994641 CA3432267 |
853 | N>I | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
CA3432268 RCV001015956 RCV000476042 rs199994641 |
853 | N>S | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002424877 CA361135604 RCV000806825 rs1580946063 |
872 | R>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
rs376239375 CA3432275 RCV002456504 RCV001346932 COSM3428946 |
873 | E>D | Variant assessed as Somatic; 0.0 impact. large_intestine Hereditary cancer-predisposing syndrome [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA dbSNP |
RCV002424873 RCV000805835 rs1580946285 |
874 | K>missing | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
RCV002430098 RCV001299800 rs1766006139 |
877 | E>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs1290775003 RCV002451454 RCV001210106 |
884 | R>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs1766015674 RCV001048453 RCV003160375 |
889 | K>Q | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
CA3432279 COSM122408 RCV001016274 RCV000798882 rs771903880 |
891 | V>M | upper_aerodigestive_tract liver Hereditary cancer-predisposing syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
RCV002424824 CA3432283 RCV000796221 rs776317664 |
898 | S>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV000809334 RCV002424890 rs762163053 CA3432287 |
902 | A>V | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV002436874 rs1766027504 RCV001224678 |
903 | M>T | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinVar dbSNP |
rs750741242 CA3432289 RCV002433981 RCV000815220 |
905 | S>G | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
rs756360361 RCV001016384 RCV000473731 CA3432290 RCV002496828 |
905 | S>N | Patterned macular dystrophy 2 Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
RCV001223194 rs1561785552 CA563498250 RCV002429947 |
907 | I>L | Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
CA361477025 rs1248704890 |
2 | T>A | No |
ClinGen TOPMed |
|
rs1410904142 CA361477033 |
3 | A>G | No |
ClinGen gnomAD |
|
CA361477036 rs1307799059 |
4 | V>L | No |
ClinGen gnomAD |
|
RCV001042158 rs1755157382 |
5 | H>Y | No |
ClinVar dbSNP |
|
TCGA novel | 6 | A>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV001326720 rs1755158341 |
7 | G>D | No |
ClinVar dbSNP |
|
rs1580978002 CA361477064 RCV000812215 |
8 | N>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1292323689 RCV001301575 CA361477070 |
9 | I>T | No |
ClinGen ClinVar TOPMed dbSNP |
|
rs1580978035 CA361477094 |
12 | K>R | No |
ClinGen Ensembl |
|
CA128716440 RCV000808291 rs955840317 |
13 | W>L | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001059959 rs988942117 CA128716441 |
15 | P>R | No |
ClinGen ClinVar TOPMed dbSNP |
|
rs1755160090 RCV001048248 |
15 | P>S | No |
ClinVar dbSNP |
|
CA3431330 rs759641978 |
16 | K>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
TCGA novel | 17 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA3431331 rs769832131 |
18 | L>R | No |
ClinGen ExAC gnomAD |
|
RCV001043751 rs1755161249 |
19 | E>* | No |
ClinVar dbSNP |
|
CA361477142 rs1580978110 RCV000817808 |
19 | E>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001320550 rs1755162650 |
22 | T>S | No |
ClinVar dbSNP |
|
CA3431333 rs762931250 |
23 | L>Q | No |
ClinGen ExAC gnomAD |
|
rs1472535447 CA361477170 |
24 | A>T | No |
ClinGen gnomAD |
|
RCV001055005 rs1755163761 |
25 | V>A | No |
ClinVar dbSNP |
|
CA3431335 RCV000792870 rs763858194 |
30 | E>A | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001248702 rs1755165264 |
30 | E>D | No |
ClinVar dbSNP |
|
rs1755165546 RCV001071044 |
31 | P>S | No |
ClinVar dbSNP |
|
rs1755166497 RCV001297036 |
34 | T>missing | No |
ClinVar dbSNP |
|
rs1580978232 CA361477244 RCV000794677 COSM1433409 |
35 | Q>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
CA3431362 rs754397589 |
38 | T>N | No |
ClinGen ExAC gnomAD |
|
rs967449848 CA128716553 RCV001055995 |
39 | L>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1755320989 RCV001228680 |
40 | V>L | No |
ClinVar dbSNP |
|
rs1755321895 RCV001238688 |
41 | N>H | No |
ClinVar dbSNP |
|
rs1755322192 RCV001068773 |
41 | N>S | No |
ClinVar dbSNP |
|
TCGA novel | 41 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs764691345 CA3431363 |
42 | T>S | No |
ClinGen ExAC gnomAD |
|
rs1162644114 CA361477300 |
43 | N>D | No |
ClinGen gnomAD |
|
RCV001034953 rs1755324870 |
44 | S>G | No |
ClinVar dbSNP |
|
RCV001051719 rs1755325154 |
44 | S>R | No |
ClinVar dbSNP |
|
TCGA novel | 46 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA3431365 rs757666042 |
47 | P>L | No |
ClinGen ExAC gnomAD |
|
rs1755326643 RCV001243265 |
48 | S>P | No |
ClinVar dbSNP |
|
rs1755327366 RCV001324654 |
49 | N>D | No |
ClinVar dbSNP |
|
CA361477345 COSM1433412 rs1308395731 |
49 | N>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
RCV001314752 rs1755328184 |
50 | K>R | No |
ClinVar dbSNP |
|
TCGA novel | 52 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1755328766 RCV001351706 |
52 | R>T | No |
ClinVar dbSNP |
|
RCV001308360 rs1755329623 |
55 | S>A | No |
ClinVar dbSNP |
|
RCV001052043 rs756329640 CA3431369 |
55 | S>C | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA361477384 rs756329640 |
55 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA361477390 rs1245581999 |
56 | K>M | No |
ClinGen gnomAD |
|
rs780078260 RCV001317125 |
58 | A>G | No |
ClinVar dbSNP |
|
CA361477401 rs1291738773 |
58 | A>S | No |
ClinGen gnomAD |
|
CA3431371 rs375006246 |
59 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1252911927 RCV001344631 CA361477429 |
62 | A>S | No |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001204249 rs1755332073 |
62 | A>V | No |
ClinVar dbSNP |
|
CA361477434 rs1175071018 |
63 | A>P | No |
ClinGen gnomAD |
|
rs867244371 CA128716556 |
64 | S>A | No |
ClinGen Ensembl |
|
CA3431373 rs774398928 |
64 | S>F | No |
ClinGen ExAC gnomAD |
|
CA3431376 rs772061558 |
67 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1755335758 RCV001058072 |
71 | N>T | No |
ClinVar dbSNP |
|
rs1755335972 RCV001226128 |
72 | F>C | No |
ClinVar dbSNP |
|
CA128716557 rs752038382 |
74 | E>D | No |
ClinGen Ensembl |
|
rs1580984414 RCV000818508 |
75 | K>missing | No |
ClinVar dbSNP |
|
rs1580984443 CA361477525 RCV000797467 |
75 | K>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1755336735 RCV001043739 |
76 | G>* | No |
ClinVar dbSNP |
|
rs1755336735 RCV001325616 |
77 | D>missing | No |
ClinVar dbSNP |
|
RCV000800151 CA361477542 rs1580984472 |
77 | D>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs200135015 CA3431382 |
80 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs759125508 CA3431380 |
80 | A>P | No |
ClinGen ExAC gnomAD |
|
rs148781132 CA361477592 |
82 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
RCV000808444 CA361477615 rs1580984616 |
84 | Q>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA361477625 rs1472421692 |
85 | F>L | No |
ClinGen TOPMed |
|
rs756417618 CA3431388 |
87 | K>E | No |
ClinGen ExAC gnomAD |
|
rs1755340199 RCV001303860 |
88 | E>Q | No |
ClinVar dbSNP |
|
CA3431389 RCV001312772 rs780367865 |
89 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
CA3431390 rs749453442 |
90 | L>F | No |
ClinGen ExAC gnomAD |
|
CA3431392 rs778857532 |
92 | A>V | No |
ClinGen ExAC gnomAD |
|
rs748173593 CA3431393 |
93 | A>G | No |
ClinGen ExAC gnomAD |
|
rs1240655761 CA361477679 RCV001202811 |
94 | V>A | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs1755342562 RCV001342200 |
95 | E>G | No |
ClinVar dbSNP |
|
RCV000802931 CA361477690 rs1451287719 |
96 | D>H | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs1755344564 RCV001300800 |
100 | Q>H | No |
ClinVar dbSNP |
|
CA3431397 rs770599506 |
100 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs1361174293 CA361477723 |
101 | G>S | No |
ClinGen gnomAD |
|
CA3431417 rs777896797 |
102 | D>G | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 103 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1193479198 CA361122796 |
104 | M>T | No |
ClinGen gnomAD |
|
CA361122789 rs1238309688 |
104 | M>V | No |
ClinGen TOPMed |
|
CA3431419 rs746920603 |
106 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1758515080 RCV001241639 |
107 | A>T | No |
ClinVar dbSNP |
|
RCV001050465 rs1758515751 |
108 | A>V | No |
ClinVar dbSNP |
|
rs769342340 RCV000820646 CA3431422 |
111 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
rs762477632 CA361122913 |
112 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 119 | V>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA361123006 rs749878552 RCV000791793 |
121 | R>P | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000813501 rs1581105631 CA361123038 |
123 | N>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA128219041 rs35788568 |
124 | M>I | No |
ClinGen Ensembl |
|
rs765587517 RCV001050567 |
124 | M>L | No |
ClinVar dbSNP |
|
RCV000798328 rs1581105656 CA361123093 |
126 | R>W | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA3431433 RCV001053991 rs758599826 COSM462073 |
129 | R>* | cervix Variant assessed as Somatic; 0.0 impact. breast [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
rs758599826 CA361123152 |
129 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1758522927 RCV001235863 |
130 | A>T | No |
ClinVar dbSNP |
|
RCV001035128 rs1758523143 |
130 | A>V | No |
ClinVar dbSNP |
|
rs1581105705 RCV000810697 |
131 | L>missing | No |
ClinVar dbSNP |
|
CA361123218 rs1407298626 |
132 | L>F | No |
ClinGen gnomAD |
|
RCV001343135 rs1758523708 |
132 | L>P | No |
ClinVar dbSNP |
|
rs1399488912 CA361123245 |
133 | S>F | No |
ClinGen gnomAD |
|
rs1758526073 RCV001305988 |
136 | T>S | No |
ClinVar dbSNP |
|
RCV001214368 rs1758527722 |
140 | I>M | No |
ClinVar dbSNP |
|
rs377601723 CA3431439 |
141 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
rs779734367 CA3431440 |
142 | A>T | No |
ClinGen ExAC gnomAD |
|
CA361123422 rs1370606389 |
142 | A>V | No |
ClinGen gnomAD |
|
rs1295022308 CA361123445 |
143 | D>V | No |
ClinGen TOPMed |
|
RCV001218568 rs1008397016 CA128219124 |
144 | M>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1290591351 CA361123475 |
144 | M>R | No |
ClinGen gnomAD |
|
RCV001338237 rs1290591351 |
144 | M>T | No |
ClinVar dbSNP |
|
RCV001294699 rs1758530800 |
147 | V>I | No |
ClinVar dbSNP |
|
CA128219140 rs1015730449 |
149 | K>R | No |
ClinGen TOPMed gnomAD |
|
CA361123655 rs1581105912 RCV000808581 |
150 | L>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
TCGA novel | 150 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA361123725 rs1219993763 |
153 | Q>E | No |
ClinGen TOPMed gnomAD |
|
rs961630194 CA128219177 |
153 | Q>H | No |
ClinGen Ensembl |
|
RCV000823485 CA361123721 rs1219993763 |
153 | Q>K | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA3431443 RCV000792798 rs773859235 |
155 | K>E | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001051746 rs533573408 |
159 | D>V | No |
ClinVar dbSNP |
|
CA361124902 RCV001048621 rs1415757253 |
160 | G>V | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs150912388 CA128220905 |
162 | L>S | No |
ClinGen ESP |
|
rs1336854183 CA361124965 |
163 | K>E | No |
ClinGen gnomAD |
|
RCV001349472 rs1404658974 |
164 | L>F | No |
ClinVar dbSNP |
|
CA128220912 rs778667305 |
169 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV001321255 rs774590663 |
171 | Q>* | No |
ClinVar dbSNP |
|
CA3431471 rs774590663 |
171 | Q>E | No |
ClinGen ExAC gnomAD |
|
CA361125163 RCV001052877 rs774590663 |
171 | Q>K | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1268137141 CA361125174 |
171 | Q>R | No |
ClinGen gnomAD |
|
RCV001298636 rs1758895003 |
172 | D>N | No |
ClinVar dbSNP |
|
rs761836161 CA3431472 COSM1061436 |
174 | G>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs1581119445 CA361125243 RCV000816416 |
174 | G>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA361125268 rs1581119454 RCV000816459 |
175 | I>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001352454 rs1758896577 |
177 | Y>H | No |
ClinVar dbSNP |
|
rs1221110257 CA361125336 |
178 | K>T | No |
ClinGen gnomAD |
|
rs1758898643 RCV001207117 |
182 | P>S | No |
ClinVar dbSNP |
|
CA361125440 rs1581119562 |
183 | E>V | No |
ClinGen Ensembl |
|
TCGA novel | 185 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1581119583 CA361125472 RCV000795452 |
185 | D>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
TCGA novel | 186 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV001212874 rs1758900525 |
187 | L>V | No |
ClinVar dbSNP |
|
RCV001243099 rs1758902024 |
189 | I>* | No |
ClinVar dbSNP |
|
rs1758903087 RCV001064507 |
190 | M>I | No |
ClinVar dbSNP |
|
rs936210314 CA128220976 |
190 | M>T | No |
ClinGen Ensembl |
|
CA361125610 RCV001223195 rs1378674814 |
191 | A>T | No |
ClinGen ClinVar dbSNP gnomAD |
|
CA3431479 rs778473050 |
192 | A>G | No |
ClinGen ExAC gnomAD |
|
CA128220997 rs74648499 |
194 | R>K | No |
ClinGen Ensembl |
|
RCV001213056 rs1581119680 |
195 | Q>E | No |
ClinVar dbSNP |
|
rs747815829 CA128220998 |
195 | Q>H | No |
ClinGen ExAC gnomAD |
|
RCV000806292 CA361125691 rs1581119680 |
195 | Q>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001212504 CA361125718 rs1419278064 |
196 | Q>E | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs1758906474 RCV001215377 |
196 | Q>H | No |
ClinVar dbSNP |
|
rs199670010 CA128228915 RCV000807106 |
201 | V>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001039035 rs199670010 |
201 | V>L | No |
ClinVar dbSNP |
|
RCV001341817 rs1760439365 |
202 | G>D | No |
ClinVar dbSNP |
|
rs1760440516 RCV001315726 |
203 | H>P | No |
ClinVar dbSNP |
|
rs772365627 RCV000822460 CA361129453 |
205 | D>G | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA3431510 rs772365627 |
205 | D>V | No |
ClinGen ExAC gnomAD |
|
rs773383379 CA3431511 |
206 | Q>* | No |
ClinGen ExAC gnomAD |
|
rs1370136860 CA361129465 |
206 | Q>R | No |
ClinGen gnomAD |
|
rs1005792890 CA128228940 |
207 | M>I | No |
ClinGen Ensembl |
|
rs1760443296 RCV001306422 |
207 | M>T | No |
ClinVar dbSNP |
|
TCGA novel | 208 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1162734122 CA361129491 |
208 | A>V | No |
ClinGen gnomAD |
|
RCV001225747 rs1760444178 |
209 | A>G | No |
ClinVar dbSNP |
|
rs201391408 RCV000791705 CA361129535 |
213 | I>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA3431515 rs759512025 |
214 | L>P | No |
ClinGen ExAC gnomAD |
|
rs1760445854 RCV001320158 |
217 | N>missing | No |
ClinVar dbSNP |
|
rs1213476232 CA361129581 |
217 | N>D | No |
ClinGen Ensembl |
|
rs1489665450 CA361129586 |
217 | N>S | No |
ClinGen gnomAD |
|
rs1458647108 CA361129614 |
220 | I>V | No |
ClinGen TOPMed gnomAD |
|
CA361129627 rs1418040582 |
221 | L>F | No |
ClinGen TOPMed |
|
CA3431525 RCV001213388 rs755524897 |
222 | Y>S | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001051785 CA361129677 rs1475281622 |
226 | Q>E | No |
ClinGen ClinVar TOPMed dbSNP |
|
CA361129681 rs1480075332 |
226 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs766853123 CA128228997 |
230 | Q>L | No |
ClinGen Ensembl |
|
rs1581167657 CA361129737 |
231 | H>P | No |
ClinGen Ensembl |
|
rs771066942 CA3431530 |
233 | D>G | No |
ClinGen ExAC gnomAD |
|
rs992791147 CA128229027 |
234 | V>A | No |
ClinGen Ensembl |
|
rs762843334 CA3431535 |
236 | A>V | No |
ClinGen ExAC gnomAD |
|
CA361129832 rs1296658237 RCV001245845 |
240 | N>D | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs749980248 CA3431540 |
240 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV001040326 rs755543443 |
242 | D>H | No |
ClinVar dbSNP |
|
CA3431541 rs755543443 |
242 | D>N | No |
ClinGen ExAC gnomAD |
|
CA3431544 rs758857870 |
243 | L>Q | No |
ClinGen ExAC gnomAD |
|
rs765813825 CA3431543 |
243 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs201899693 RCV001327789 |
244 | I>M | No |
ClinVar dbSNP |
|
RCV001059945 rs1271760767 CA361129879 |
244 | I>T | No |
ClinGen ClinVar TOPMed dbSNP |
|
rs781342935 RCV001303773 CA361129897 |
246 | K>E | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001338807 rs1760460898 |
247 | Q>missing | No |
ClinVar dbSNP |
|
rs200873942 CA3431549 |
250 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA3431550 rs769727520 |
251 | A>T | No |
ClinGen ExAC gnomAD |
|
rs775541936 CA3431551 |
251 | A>V | No |
ClinGen ExAC gnomAD |
|
RCV001215220 rs1760462170 |
252 | V>I | No |
ClinVar dbSNP |
|
CA3431553 rs768635669 |
253 | T>K | No |
ClinGen ExAC gnomAD |
|
rs1760462669 RCV001339211 |
254 | G>V | No |
ClinVar dbSNP |
|
RCV001307768 rs1760463089 |
255 | I>L | No |
ClinVar dbSNP |
|
RCV001237487 rs1760463089 |
255 | I>V | No |
ClinVar dbSNP |
|
rs1407898928 CA361129967 RCV001351008 |
257 | N>H | No |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001229834 rs1760465096 |
260 | Q>* | No |
ClinVar dbSNP |
|
rs772713589 CA3431557 |
263 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA361130038 rs772713589 RCV001324905 |
263 | A>V | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA361130050 rs1380857011 |
264 | S>L | No |
ClinGen gnomAD |
|
RCV000804207 rs1581168018 |
265 | D>missing | No |
ClinVar dbSNP |
|
rs201610640 CA128229158 |
268 | S>P | No |
ClinGen 1000Genomes |
|
CA361130104 rs1375425400 |
269 | Q>R | No |
ClinGen gnomAD |
|
CA361130120 rs201055659 |
270 | H>L | No |
ClinGen 1000Genomes gnomAD |
|
CA128229164 rs201055659 |
270 | H>R | No |
ClinGen 1000Genomes gnomAD |
|
rs1216349400 CA361130132 |
271 | Q>* | No |
ClinGen gnomAD |
|
CA361130151 rs1196121090 |
272 | G>D | No |
ClinGen TOPMed |
|
CA3431564 rs751942119 |
273 | G>A | No |
ClinGen ExAC gnomAD |
|
RCV001224880 rs751942119 |
273 | G>E | No |
ClinVar dbSNP |
|
RCV001239095 rs1760472413 |
274 | G>missing | No |
ClinVar dbSNP |
|
rs1243048088 CA361130169 |
274 | G>R | No |
ClinGen gnomAD |
|
rs781432848 CA3431566 |
275 | G>E | No |
ClinGen ExAC gnomAD |
|
RCV001057982 rs1760473602 |
275 | G>R | No |
ClinVar dbSNP |
|
TCGA novel | 276 | G>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV000799434 CA361130275 rs1581168265 |
281 | A>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA3431567 rs750584026 |
283 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs756271500 RCV001216814 CA361130337 |
285 | F>L | No |
ClinGen ExAC gnomAD ClinVar dbSNP |
|
rs779989605 | 286 | D>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
rs779989605 CA361130354 |
286 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1226995974 CA361130630 |
288 | Q>H | No |
ClinGen TOPMed |
|
CA361130626 rs1300943167 |
288 | Q>R | No |
ClinGen gnomAD |
|
rs377651419 CA3431583 |
289 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
rs1371136695 CA361130663 |
291 | V>A | No |
ClinGen gnomAD |
|
RCV001303121 rs1760843847 |
292 | D>V | No |
ClinVar dbSNP |
|
rs1760844159 RCV001296033 |
293 | P>* | No |
ClinVar dbSNP |
|
rs1760844334 RCV001241240 |
293 | P>L | No |
ClinVar dbSNP |
|
rs1315620177 CA361130695 |
294 | L>S | No |
ClinGen gnomAD |
|
rs761908860 CA128231133 |
297 | S>N | No |
ClinGen Ensembl |
|
RCV000797240 CA361130739 rs1581178228 |
298 | E>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs369518072 CA361130772 |
300 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1760845759 RCV001246119 |
301 | F>missing | No |
ClinVar dbSNP |
|
rs1760847242 RCV001247248 |
301 | F>C | No |
ClinVar dbSNP |
|
rs35879875 CA128231170 |
302 | R>K | No |
ClinGen Ensembl |
|
RCV000824055 rs1581178341 |
309 | L>missing | No |
ClinVar dbSNP |
|
rs1581178351 CA361130877 RCV000813225 |
311 | S>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA3431594 rs746761844 |
311 | S>T | No |
ClinGen ExAC |
|
rs1760849989 RCV001317214 |
313 | I>V | No |
ClinVar dbSNP |
|
CA3431596 rs200854132 |
314 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
RCV000800337 CA361130939 rs1161812904 |
316 | A>V | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs1760852256 RCV001070807 |
323 | S>P | No |
ClinVar dbSNP |
|
rs1581178471 CA361131033 RCV000817529 |
325 | T>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000803453 rs1581178471 CA361131037 COSM204788 |
325 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
RCV001224844 rs1454089908 CA361131043 |
326 | R>H | No |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001044169 rs1581178503 |
328 | D>Y | No |
ClinVar dbSNP |
|
CA128231293 rs371052704 COSM239475 |
332 | R>* | Variant assessed as Somatic; impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP NCI-TCGA TOPMed gnomAD |
rs371052704 CA128231288 |
332 | R>G | No |
ClinGen ESP TOPMed gnomAD |
|
CA361131106 rs1316182048 |
333 | I>L | No |
ClinGen gnomAD |
|
RCV001344470 rs1760855499 |
334 | V>M | No |
ClinVar dbSNP |
|
rs1760855901 RCV001317004 |
335 | A>V | No |
ClinVar dbSNP |
|
rs1760856291 RCV001320773 |
336 | E>D | No |
ClinVar dbSNP |
|
rs1760856538 RCV001235309 |
337 | C>missing | No |
ClinVar dbSNP |
|
RCV001313988 rs1760856868 |
340 | V>L | No |
ClinVar dbSNP |
|
rs1760857124 RCV001071669 |
341 | R>C | No |
ClinVar dbSNP |
|
RCV000801476 CA361131214 rs1581178631 |
342 | Q>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1561568512 CA361131227 |
343 | A>V | No |
ClinGen Ensembl |
|
TCGA novel | 350 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1581178714 CA361131321 RCV000815347 |
352 | M>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001315029 rs758284033 |
353 | G>C | No |
ClinVar dbSNP |
|
rs758284033 CA3431609 RCV000804918 |
353 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
CA361132454 rs1344832755 |
356 | G>R | No |
ClinGen gnomAD |
|
RCV001057098 rs1753991365 |
360 | R>missing | No |
ClinVar dbSNP |
|
RCV001230394 rs1753992305 |
360 | R>G | No |
ClinVar dbSNP |
|
rs1753992786 RCV001231740 |
361 | S>I | No |
ClinVar dbSNP |
|
RCV001043169 rs1753992786 |
361 | S>N | No |
ClinVar dbSNP |
|
rs1581474079 RCV000800084 CA361132516 |
362 | D>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
TCGA novel | 362 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1215283244 CA361132523 |
363 | A>E | No |
ClinGen gnomAD |
|
rs1353922569 CA361132520 |
363 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs1215283244 RCV001062833 |
363 | A>V | No |
ClinVar dbSNP |
|
rs761743181 CA3431860 RCV001056197 |
365 | N>S | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001341818 rs1753999575 |
370 | K>T | No |
ClinVar dbSNP |
|
CA3431861 rs767384077 |
371 | M>I | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 375 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV001233835 rs1754001022 |
375 | T>I | No |
ClinVar dbSNP |
|
RCV001245024 rs1581474328 |
377 | D>E | No |
ClinVar dbSNP |
|
CA3431862 RCV000807411 rs773022966 |
379 | R>C | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1394423178 CA361132974 |
388 | D>H | No |
ClinGen gnomAD |
|
CA361132973 rs1394423178 |
388 | D>N | No |
ClinGen gnomAD |
|
CA361132983 rs1460381137 |
389 | H>N | No |
ClinGen gnomAD |
|
CA3431879 rs772037860 |
396 | E>K | No |
ClinGen ExAC gnomAD |
|
RCV001299569 rs1754345735 |
404 | L>S | No |
ClinVar dbSNP |
|
CA361133076 rs1258629775 |
404 | L>V | No |
ClinGen gnomAD |
|
rs143830504 CA3431884 |
406 | E>D | No |
ClinGen ESP ExAC |
|
TCGA novel | 407 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA361133133 rs1248721633 |
412 | N>S | No |
ClinGen gnomAD |
|
rs1754351069 RCV001298421 |
414 | K>E | No |
ClinVar dbSNP |
|
CA361133153 rs1581484370 |
415 | E>K | No |
ClinGen Ensembl |
|
RCV001054842 rs1426385729 |
416 | V>missing | No |
ClinVar dbSNP |
|
rs150649788 CA128238225 |
417 | K>Q | No |
ClinGen ESP |
|
RCV001043822 rs1754355304 |
421 | Q>* | No |
ClinVar dbSNP |
|
rs199965886 CA128238238 |
423 | F>L | No |
ClinGen 1000Genomes |
|
CA361133225 rs1289952917 |
425 | E>A | No |
ClinGen TOPMed |
|
CA3431890 rs756567640 |
426 | H>R | No |
ClinGen ExAC gnomAD |
|
rs1754360812 RCV001342024 |
427 | A>T | No |
ClinVar dbSNP |
|
CA3431891 rs780285551 RCV001069782 |
428 | N>D | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1167873878 CA361133268 |
431 | I>T | No |
ClinGen gnomAD |
|
rs1397271124 | 432 | E>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV001316678 rs1754366213 |
432 | E>G | No |
ClinVar dbSNP |
|
rs779166169 CA3431912 |
434 | A>D | No |
ClinGen ExAC gnomAD |
|
rs779166169 CA361135870 RCV000802471 |
434 | A>V | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs747066634 CA3431916 |
438 | C>S | No |
ClinGen ExAC gnomAD |
|
rs747066634 CA3431917 |
438 | C>Y | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 440 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV001065140 rs368676572 CA3431919 |
440 | I>V | No |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
CA3431920 rs769696803 |
443 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV001053720 rs1758714268 |
444 | E>missing | No |
ClinVar dbSNP |
|
rs1758715728 RCV001057025 |
445 | E>D | No |
ClinVar dbSNP |
|
rs1758716428 RCV001300772 |
446 | G>D | No |
ClinVar dbSNP |
|
rs1344157927 CA361135954 |
447 | V>A | No |
ClinGen gnomAD |
|
CA361135963 rs921350297 |
448 | K>N | No |
ClinGen Ensembl |
|
CA3431923 rs768295138 |
449 | L>R | No |
ClinGen ExAC gnomAD |
|
rs372832887 CA3431925 |
452 | M>L | No |
ClinGen ESP ExAC gnomAD |
|
RCV001317930 CA361135994 rs777109167 |
454 | A>E | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA361136010 RCV000820860 rs1581613999 |
456 | Q>H | No |
ClinGen ClinVar Ensembl dbSNP |
|
TCGA novel | 459 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1338186632 CA361136035 COSM1721769 |
460 | L>F | NS [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
RCV000818179 CA361136037 rs1581614081 |
460 | L>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs763349368 CA3431951 |
465 | I>S | No |
ClinGen ExAC gnomAD |
|
rs1231981158 CA361137087 |
470 | A>T | No |
ClinGen gnomAD |
|
RCV001223621 rs1762099256 |
473 | A>G | No |
ClinVar dbSNP |
|
CA128260468 rs1022331992 |
475 | P>L | No |
ClinGen TOPMed |
|
rs1022331992 RCV001225128 |
475 | P>Q | No |
ClinVar dbSNP |
|
rs1183219056 CA361137148 |
475 | P>S | No |
ClinGen gnomAD |
|
rs1762102504 RCV001298780 |
476 | Q>P | No |
ClinVar dbSNP |
|
rs1314978664 CA361137196 |
482 | E>* | No |
ClinGen TOPMed |
|
TCGA novel | 482 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA3431956 rs750470900 RCV000808792 |
484 | M>V | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA361137229 rs1285880378 |
486 | L>H | No |
ClinGen TOPMed |
|
RCV001349343 rs1762110873 |
489 | E>A | No |
ClinVar dbSNP |
|
rs749135177 CA3431959 |
491 | W>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
RCV000823205 rs778497800 CA3431961 |
496 | R>H | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA3431962 rs747842444 |
500 | D>N | No |
ClinGen ExAC gnomAD |
|
CA3431964 rs772733704 |
501 | A>V | No |
ClinGen ExAC gnomAD |
|
CA361137346 rs1257768986 |
503 | D>E | No |
ClinGen gnomAD |
|
CA3431965 rs746486077 |
504 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
TCGA novel | 504 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs770329095 RCV001043368 |
505 | I>M | No |
ClinVar dbSNP |
|
RCV000803294 rs1580800323 CA361137359 |
505 | I>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA3431967 rs775958172 |
506 | T>A | No |
ClinGen ExAC gnomAD |
|
RCV001319419 rs1762131167 |
507 | S>C | No |
ClinVar dbSNP |
|
rs1343841644 CA361137381 |
509 | D>H | No |
ClinGen TOPMed |
|
rs1580800530 RCV000810386 CA361137409 |
512 | L>F | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1762138459 RCV001350754 |
515 | S>* | No |
ClinVar dbSNP |
|
TCGA novel | 515 | S>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1763594018 RCV001226990 |
516 | E>D | No |
ClinVar dbSNP |
|
rs1763594477 RCV001312481 |
517 | N>missing | No |
ClinVar dbSNP |
|
TCGA novel | 525 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV001344426 rs1763595994 |
525 | K>R | No |
ClinVar dbSNP |
|
rs760904270 CA3431993 |
526 | C>S | No |
ClinGen ExAC gnomAD |
|
CA361131781 rs1335925565 |
532 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
TCGA novel | 534 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA3431997 rs765048202 |
535 | V>A | No |
ClinGen ExAC gnomAD |
|
rs1302005886 RCV001216256 CA361131824 |
538 | L>V | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs547329141 CA3431998 |
539 | D>H | No |
ClinGen 1000Genomes ExAC |
|
RCV001212236 rs1763606613 |
541 | T>I | No |
ClinVar dbSNP |
|
TCGA novel | 543 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1763607617 RCV001306894 |
544 | A>V | No |
ClinVar dbSNP |
|
CA361131865 rs1060502220 |
545 | I>F | No |
ClinGen gnomAD |
|
RCV001240658 rs1763611433 |
547 | G>V | No |
ClinVar dbSNP |
|
RCV001318181 CA361131882 rs1252185833 |
548 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
RCV001321585 rs1763613886 |
551 | R>Q | No |
ClinVar dbSNP |
|
rs1763613333 RCV001037114 |
551 | R>W | No |
ClinVar dbSNP |
|
rs1580855344 CA361131907 |
552 | V>G | No |
ClinGen Ensembl |
|
CA128217038 rs1012760007 |
553 | I>T | No |
ClinGen TOPMed gnomAD |
|
rs1763615247 RCV001342938 |
553 | I>V | No |
ClinVar dbSNP |
|
rs1763616190 RCV001294952 |
554 | H>R | No |
ClinVar dbSNP |
|
rs769235447 CA361131952 |
560 | M>V | No |
ClinGen ExAC TOPMed |
|
CA3432006 rs779256563 |
562 | N>H | No |
ClinGen ExAC gnomAD |
|
rs1763626572 RCV001308145 |
572 | V>I | No |
ClinVar dbSNP |
|
rs1580855864 CA361132046 |
573 | L>R | No |
ClinGen Ensembl |
|
CA3432011 rs201451671 |
574 | E>K | No |
ClinGen ExAC gnomAD |
|
rs1763630609 RCV001043072 |
578 | L>P | No |
ClinVar dbSNP |
|
CA361132080 rs1466982820 |
579 | L>F | No |
ClinGen gnomAD |
|
rs1203628463 | 583 | V>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV001045639 rs1763763066 |
583 | V>G | No |
ClinVar dbSNP |
|
rs1352998855 CA361132126 |
584 | M>T | No |
ClinGen gnomAD |
|
CA361132132 rs1383896601 |
585 | P>A | No |
ClinGen gnomAD |
|
RCV001294489 rs1383896601 |
585 | P>S | No |
ClinVar dbSNP |
|
CA128217473 rs201494088 |
587 | F>L | No |
ClinGen 1000Genomes |
|
rs1273174561 | 587 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV001229912 rs926691029 CA128217478 |
590 | Q>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs775570045 CA3432033 |
592 | E>A | No |
ClinGen ExAC gnomAD |
|
rs1580861226 CA361132199 |
595 | V>A | No |
ClinGen Ensembl |
|
CA3432036 rs774165453 |
599 | S>R | No |
ClinGen ExAC gnomAD |
|
CA361132223 RCV000812019 rs1580861345 |
599 | S>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs892478752 CA128217558 |
603 | A>D | No |
ClinGen Ensembl |
|
rs1172595924 CA361132244 |
603 | A>T | No |
ClinGen gnomAD |
|
CA3432041 rs765820297 |
604 | Q>L | No |
ClinGen ExAC gnomAD |
|
rs1384107535 CA361132295 |
610 | E>* | No |
ClinGen gnomAD |
|
CA361132316 rs1561758576 RCV001212014 |
613 | D>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA3432044 rs778390683 |
614 | A>V | No |
ClinGen ExAC gnomAD |
|
CA3432046 rs760220853 |
616 | R>C | No |
ClinGen ExAC gnomAD |
|
RCV001214613 rs1763792661 |
619 | Y>H | No |
ClinVar dbSNP |
|
rs1580862235 CA361132369 |
621 | G>D | No |
ClinGen Ensembl |
|
rs749328559 CA3432051 |
623 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs1561758858 RCV001239525 CA361132380 |
623 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
rs1763798599 RCV001307058 |
627 | K>R | No |
ClinVar dbSNP |
|
rs1580862491 RCV000793320 CA361132448 |
631 | M>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1455520969 CA361132436 |
631 | M>V | No |
ClinGen TOPMed |
|
rs1253558458 RCV001306751 |
633 | R>S | No |
ClinVar dbSNP |
|
rs1561758996 CA361132465 |
633 | R>W | No |
ClinGen Ensembl |
|
rs749421689 CA3432070 |
635 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 636 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1060502221 CA361132686 |
637 | E>* | No |
ClinGen gnomAD |
|
rs1060502221 CA16611824 RCV001365232 |
637 | E>K | No |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001233563 rs1764796614 |
640 | D>* | No |
ClinVar dbSNP |
|
CA361132742 rs1580895924 RCV000802610 |
644 | E>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA3432073 rs748048489 |
645 | T>I | No |
ClinGen ExAC gnomAD |
|
rs1470787021 CA361132758 RCV000799340 |
646 | E>D | No |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000817990 CA361132803 rs1580896125 |
653 | R>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1764802060 RCV001034755 |
653 | R>T | No |
ClinVar dbSNP |
|
CA361132823 rs564390551 RCV000807978 |
656 | V>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA128220962 rs956359311 |
659 | E>K | No |
ClinGen Ensembl |
|
rs1764808534 RCV001221315 |
661 | D>E | No |
ClinVar dbSNP |
|
rs1021590336 CA128220981 |
661 | D>N | No |
ClinGen gnomAD |
|
CA361132867 rs1258165471 |
661 | D>V | No |
ClinGen gnomAD |
|
rs1021590336 CA361132861 |
661 | D>Y | No |
ClinGen gnomAD |
|
CA10582403 RCV001367578 rs878854469 |
664 | I>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001037474 rs878854469 |
664 | I>T | No |
ClinVar dbSNP |
|
rs1181915653 RCV001295219 |
666 | G>missing | No |
ClinVar dbSNP |
|
rs1764812403 RCV001211628 |
667 | Q>R | No |
ClinVar dbSNP |
|
rs1180015219 CA361132958 |
670 | R>Q | No |
ClinGen gnomAD |
|
rs773758649 CA3432106 |
671 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs1363433371 RCV001047075 |
672 | I>M | No |
ClinVar dbSNP |
|
RCV001294331 rs1765079997 |
678 | Q>E | No |
ClinVar dbSNP |
|
rs755223739 CA3432110 |
678 | Q>P | No |
ClinGen ExAC gnomAD |
|
rs1580907907 CA361133373 |
682 | A>V | No |
ClinGen Ensembl |
|
CA128221958 rs1035466981 |
683 | K>R | No |
ClinGen Ensembl |
|
CA3432112 rs369619831 |
685 | A>E | No |
ClinGen ESP ExAC gnomAD |
|
CA3432114 rs777634448 |
688 | V>M | No |
ClinGen ExAC gnomAD |
|
rs1246032350 CA361133421 |
690 | S>G | No |
ClinGen gnomAD |
|
rs1580908282 RCV000792187 CA361133457 |
694 | E>A | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1414571764 RCV000822707 CA361133471 |
696 | S>N | No |
ClinGen ClinVar TOPMed dbSNP |
|
rs1580908424 CA361133495 |
699 | D>E | No |
ClinGen Ensembl |
|
CA361133537 rs1476911901 |
705 | W>* | No |
ClinGen TOPMed |
|
rs567388162 CA3432118 |
706 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1477757426 CA361133624 |
718 | Q>E | No |
ClinGen gnomAD |
|
TCGA novel | 722 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1765095728 RCV001304681 |
725 | E>D | No |
ClinVar dbSNP |
|
rs1765095247 RCV001229691 |
725 | E>K | No |
ClinVar dbSNP |
|
rs1765096205 RCV001234290 |
726 | M>R | No |
ClinVar dbSNP |
|
rs1765097119 RCV001343574 |
727 | T>A | No |
ClinVar dbSNP |
|
RCV001296123 rs1765096685 |
728 | D>missing | No |
ClinVar dbSNP |
|
rs1401839892 CA361133729 |
731 | R>G | No |
ClinGen TOPMed gnomAD |
|
COSM1061468 CA361133731 rs1294176302 |
731 | R>Q | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
CA361133772 rs1233799861 |
736 | L>F | No |
ClinGen gnomAD |
|
RCV001054690 rs1765148631 |
737 | K>R | No |
ClinVar dbSNP |
|
TCGA novel | 737 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
RCV001211904 rs1765149617 |
738 | N>S | No |
ClinVar dbSNP |
|
rs1263577703 CA361133794 |
739 | T>A | No |
ClinGen gnomAD |
|
CA128222255 rs377649610 |
744 | S>N | No |
ClinGen gnomAD |
|
rs1765153405 RCV001325908 |
744 | S>R | No |
ClinVar dbSNP |
|
rs770197152 RCV001317470 |
747 | K>R | No |
ClinVar dbSNP |
|
rs770197152 CA3432144 |
747 | K>T | No |
ClinGen ExAC gnomAD |
|
rs775656419 CA3432145 |
752 | A>V | No |
ClinGen ExAC gnomAD |
|
RCV000794957 rs1189259615 CA361133943 |
761 | R>C | No |
ClinGen ClinVar dbSNP gnomAD |
|
CA361133944 rs1368309620 COSM1495990 |
761 | R>H | kidney [Cosmic] | No |
ClinGen cosmic curated gnomAD |
rs1765161404 RCV001324061 |
762 | T>missing | No |
ClinVar dbSNP |
|
rs1313093200 CA361133951 |
762 | T>S | No |
ClinGen TOPMed |
|
rs1561779762 CA361134280 |
769 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
rs1561779762 CA361134282 |
769 | D>Y | No |
ClinGen Ensembl |
|
TCGA novel | 772 | C>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA361134303 rs1295597777 |
772 | C>Y | No |
ClinGen gnomAD |
|
RCV001236958 rs1765608829 |
773 | K>E | No |
ClinVar dbSNP |
|
rs1580929868 CA361134328 |
775 | D>A | No |
ClinGen Ensembl |
|
rs1580929904 RCV001320073 |
775 | D>E | No |
ClinVar dbSNP |
|
TCGA novel | 776 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA361134355 rs767711515 RCV000792377 |
779 | Y>* | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1207377565 CA361134362 RCV001318595 |
781 | Q>E | No |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001316063 rs75050399 |
781 | Q>H | No |
ClinVar dbSNP |
|
rs1274345685 CA361134371 RCV001047381 COSM204814 |
782 | R>H | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ClinVar NCI-TCGA TOPMed dbSNP |
rs1204441821 RCV001211276 |
784 | A>S | No |
ClinVar dbSNP |
|
COSM735524 CA361134381 rs1204441821 |
784 | A>T | lung Variant assessed as Somatic; impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
rs1765620317 RCV001201809 |
786 | Y>F | No |
ClinVar dbSNP |
|
RCV000818249 rs754714318 CA361134437 |
791 | N>K | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000798244 rs1580930647 |
799 | E>missing | No |
ClinVar dbSNP |
|
rs757984994 CA361134510 |
801 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV001298035 rs1765626555 |
802 | N>Y | No |
ClinVar dbSNP |
|
RCV001224535 rs1765627973 |
804 | G>S | No |
ClinVar dbSNP |
|
rs1580930995 CA361134541 |
806 | E>G | No |
ClinGen Ensembl |
|
rs1765630072 RCV001061581 |
807 | L>V | No |
ClinVar dbSNP |
|
RCV001318086 rs1765631482 |
811 | G>A | No |
ClinVar dbSNP |
|
rs917387568 CA128225374 |
815 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs758917236 CA3432248 |
819 | I>N | No |
ClinGen ExAC gnomAD |
|
RCV000792183 rs1580943823 |
821 | A>PCP* | No |
ClinVar dbSNP |
|
rs1580943823 CA915942580 |
822 | A>P | No |
ClinGen Ensembl |
|
TCGA novel | 825 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1580944149 RCV000794097 CA361135190 |
831 | Q>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA3432251 rs757458065 |
831 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA128225438 rs1011175430 |
833 | V>M | No |
ClinGen Ensembl |
|
rs924303936 RCV001320395 CA128225442 |
835 | A>T | No |
ClinGen ClinVar TOPMed dbSNP |
|
CA361135292 rs1245937649 |
839 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs1765980974 RCV001337671 |
840 | S>C | No |
ClinVar dbSNP |
|
rs1765983475 RCV001053947 |
842 | K>T | No |
ClinVar dbSNP |
|
TCGA novel | 843 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1189986841 CA361135344 |
843 | Y>H | No |
ClinGen gnomAD |
|
RCV001070524 rs1765985574 |
846 | S>A | No |
ClinVar dbSNP |
|
CA361135413 rs1561784473 |
847 | Q>H | No |
ClinGen Ensembl |
|
rs575417154 RCV001313013 |
848 | G>D | No |
ClinVar dbSNP |
|
rs1158956721 CA361135418 |
848 | G>S | No |
ClinGen TOPMed gnomAD |
|
rs575417154 CA128225483 |
848 | G>V | No |
ClinGen Ensembl |
|
CA361135432 rs1274447948 |
849 | M>T | No |
ClinGen gnomAD |
|
rs776231900 CA3432265 |
849 | M>V | No |
ClinGen ExAC gnomAD |
|
RCV001220043 CA361135450 rs1213017578 |
850 | A>V | No |
ClinGen ClinVar TOPMed dbSNP |
|
CA3432266 rs763581331 COSM3946881 |
851 | S>F | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
RCV001219525 CA361135473 rs1580945305 |
853 | N>H | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs374540412 CA3432270 |
853 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1245307813 CA361135479 |
854 | L>F | No |
ClinGen TOPMed |
|
RCV001349085 rs1765994387 |
856 | A>V | No |
ClinVar dbSNP |
|
TCGA novel | 859 | W>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1290158082 RCV000814212 CA361135526 |
861 | M>V | No |
ClinGen ClinVar dbSNP gnomAD |
|
CA361135547 rs1325475536 RCV001222887 |
863 | A>V | No |
ClinGen ClinVar TOPMed dbSNP |
|
CA128225556 rs982751471 |
870 | V>L | No |
ClinGen Ensembl |
|
rs1266085029 RCV000821978 |
874 | K>missing | No |
ClinVar dbSNP |
|
rs201312255 CA128225572 |
874 | K>E | No |
ClinGen 1000Genomes |
|
RCV000805346 rs1580946185 |
876 | D>missing | No |
ClinVar dbSNP |
|
RCV001326710 rs1766006565 |
877 | E>missing | No |
ClinVar dbSNP |
|
rs1580946401 RCV000804856 |
879 | Q>missing | No |
ClinVar dbSNP |
|
rs758854772 CA128225581 |
880 | T>I | No |
ClinGen Ensembl |
|
rs758854772 RCV001242434 |
880 | T>S | No |
ClinVar dbSNP |
|
CA3432276 rs754912563 |
881 | K>N | No |
ClinGen ExAC gnomAD |
|
rs1766009252 RCV001347659 |
881 | K>R | No |
ClinVar dbSNP |
|
COSM1433440 rs1451142725 CA361135692 |
884 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs1290775003 CA361135690 |
884 | R>W | No |
ClinGen TOPMed gnomAD |
|
rs1196787444 CA361135695 |
885 | A>T | No |
ClinGen gnomAD |
|
rs1766013432 RCV001039040 |
886 | S>missing | No |
ClinVar dbSNP |
|
rs1580946793 RCV001341122 |
887 | Q>* | No |
ClinVar dbSNP |
|
COSM1186842 rs1580946793 RCV000813706 CA361135707 |
887 | Q>E | lung [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
rs528674508 CA3432278 |
890 | H>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs973328870 CA128225626 RCV000819362 |
893 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
RCV000806663 rs1580947045 CA361135766 |
895 | Q>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001299214 CA3432286 rs774921598 |
899 | E>D | No |
ClinVar dbSNP ClinGen ExAC gnomAD |
|
rs764563953 RCV001044819 |
899 | E>K | No |
ClinVar dbSNP |
|
CA3432285 RCV001318318 rs764563953 |
899 | E>Q | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1766025064 RCV001222004 |
901 | K>R | No |
ClinVar dbSNP |
|
rs1766025586 RCV001246588 |
902 | A>missing | No |
ClinVar dbSNP |
No associated diseases with P35221
Functions
Description | ||
---|---|---|
EC Number | ||
Subcellular Localization |
|
|
PANTHER Family | PTHR18914 | ALPHA CATENIN |
PANTHER Subfamily | PTHR18914:SF24 | CATENIN ALPHA-1 |
PANTHER Protein Class | non-motor actin binding protein | |
PANTHER Pathway Category |
Alzheimer disease-presenilin pathway alpha-catenin Wnt signaling pathway alpha-catenin Cadherin signaling pathway alpha-catenin |
14 GO annotations of cellular component
Name | Definition |
---|---|
acrosomal vesicle | A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome. |
actin cytoskeleton | The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes. |
adherens junction | A cell-cell junction composed of the epithelial cadherin-catenin complex. The epithelial cadherins, or E-cadherins, of each interacting cell extend through the plasma membrane into the extracellular space and bind to each other. The E-cadherins bind to catenins on the cytoplasmic side of the membrane, where the E-cadherin-catenin complex binds to cytoskeletal components and regulatory and signaling molecules. |
catenin complex | Complex of peripheral cytoplasmic proteins (alpha-, beta- and gamma-catenin) that interact with the cytoplasmic region of uvomorulin/E-cadherin to connect it to the actin cytoskeleton. |
cell junction | A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella. |
cell-cell junction | A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects. |
cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
flotillin complex | A protein complex that contains flotillin-1 and flotillin-2, and may contain associated proteins. Flotillins associate into membrane microdomains resembling caveolae. |
focal adhesion | A cell-substrate junction that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments. In insects focal adhesion has also been referred to as hemi-adherens junction (HAJ). |
intercalated disc | A complex cell-cell junction at which myofibrils terminate in cardiomyocytes; mediates mechanical and electrochemical integration between individual cardiomyocytes. The intercalated disc contains regions of tight mechanical attachment (fasciae adherentes and desmosomes) and electrical coupling (gap junctions) between adjacent cells. |
intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
lamellipodium | A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments. |
plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
zonula adherens | A cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells. |
8 GO annotations of molecular function
Name | Definition |
---|---|
actin filament binding | Binding to an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. |
beta-catenin binding | Binding to a catenin beta subunit. |
cadherin binding | Binding to cadherin, a type I membrane protein involved in cell adhesion. |
gamma-catenin binding | Binding to catenin complex gamma subunit. |
identical protein binding | Binding to an identical protein or proteins. |
RNA binding | Binding to an RNA molecule or a portion thereof. |
structural molecule activity | The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell. |
vinculin binding | Binding to vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane. |
27 GO annotations of biological process
Name | Definition |
---|---|
actin filament organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
aging | A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700). |
apical junction assembly | The formation of an apical junction, a functional unit located near the cell apex at the points of contact between epithelial cells composed of the tight junction, the zonula adherens junction and the desmosomes, by the aggregation, arrangement and bonding together of its constituents. |
axon regeneration | The regrowth of axons following their loss or damage. |
cell adhesion | The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
cell migration | The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. Cell migration is a central process in the development and maintenance of multicellular organisms. |
cell-cell adhesion | The attachment of one cell to another cell via adhesion molecules. |
cellular response to indole-3-methanol | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an indole-3-methanol stimulus. |
epithelial cell-cell adhesion | The attachment of an epithelial cell to another epithelial cell via adhesion molecules. |
establishment or maintenance of cell polarity | Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns. |
extrinsic apoptotic signaling pathway in absence of ligand | The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with withdrawal of a ligand from a cell surface receptor, and ends when the execution phase of apoptosis is triggered. |
gap junction assembly | Assembly of gap junctions, which are found in most animal tissues, and serve as direct connections between the cytoplasms of adjacent cells. They provide open channels through the plasma membrane, allowing ions and small molecules (less than approximately a thousand daltons) to diffuse freely between neighboring cells, but preventing the passage of proteins and nucleic acids. |
integrin-mediated signaling pathway | The series of molecular signals initiated by an extracellular ligand binding to an integrin on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. |
male gonad development | The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure. |
negative regulation of cell motility | Any process that stops, prevents, or reduces the frequency, rate or extent of cell motility. |
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand | Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand. |
negative regulation of integrin-mediated signaling pathway | Any process that stops, prevents or reduces the frequency, rate or extent of integrin-mediated signaling pathway. |
negative regulation of neuroblast proliferation | Any process that stops, prevents, or reduces the frequency, rate or extent of the proliferation of neuroblasts. |
negative regulation of protein localization to nucleus | Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleus. |
neuroblast proliferation | The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron. |
odontogenesis of dentin-containing tooth | The process whose specific outcome is the progression of a dentin-containing tooth over time, from its formation to the mature structure. A dentin-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and is composed mainly of dentin, a dense calcified substance, covered by a layer of enamel. |
ovarian follicle development | The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure. |
positive regulation of extrinsic apoptotic signaling pathway in absence of ligand | Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand. |
positive regulation of smoothened signaling pathway | Any process that activates or increases the frequency, rate or extent of smoothened signaling. |
protein localization | Any process in which a protein is transported to, or maintained in, a specific location. |
response to estrogen | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics. |
smoothened signaling pathway | The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened. |
16 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q3MHM6 | CTNNA1 | Catenin alpha-1 | Bos taurus (Bovine) | SS |
P12003 | VCL | Vinculin | Gallus gallus (Chicken) | EV |
P30997 | CTNNA2 | Catenin alpha-2 | Gallus gallus (Chicken) | SS |
P35220 | alpha-Cat | Catenin alpha | Drosophila melanogaster (Fruit fly) | SS |
P18206 | VCL | Vinculin | Homo sapiens (Human) | SS |
Q9UI47 | CTNNA3 | Catenin alpha-3 | Homo sapiens (Human) | SS |
P26232 | CTNNA2 | Catenin alpha-2 | Homo sapiens (Human) | SS |
Q61301 | Ctnna2 | Catenin alpha-2 | Mus musculus (Mouse) | EV |
Q64727 | Vcl | Vinculin | Mus musculus (Mouse) | SS |
Q65CL1 | Ctnna3 | Catenin alpha-3 | Mus musculus (Mouse) | EV |
P26231 | Ctnna1 | Catenin alpha-1 | Mus musculus (Mouse) | EV |
P26234 | VCL | Vinculin | Sus scrofa (Pig) | SS |
P85972 | Vcl | Vinculin | Rattus norvegicus (Rat) | SS |
P90947 | hmp-1 | Alpha-catenin-like protein hmp-1 | Caenorhabditis elegans | SS |
A4IGI7 | ctnna2 | Catenin alpha-2 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | SS |
B7ZC77 | Ctnna2 | Catenin alpha-2 | Danio rerio (Zebrafish) (Brachydanio rerio) | SS |
10 | 20 | 30 | 40 | 50 | 60 |
MTAVHAGNIN | FKWDPKSLEI | RTLAVERLLE | PLVTQVTTLV | NTNSKGPSNK | KRGRSKKAHV |
70 | 80 | 90 | 100 | 110 | 120 |
LAASVEQATE | NFLEKGDKIA | KESQFLKEEL | VAAVEDVRKQ | GDLMKAAAGE | FADDPCSSVK |
130 | 140 | 150 | 160 | 170 | 180 |
RGNMVRAARA | LLSAVTRLLI | LADMADVYKL | LVQLKVVEDG | ILKLRNAGNE | QDLGIQYKAL |
190 | 200 | 210 | 220 | 230 | 240 |
KPEVDKLNIM | AAKRQQELKD | VGHRDQMAAA | RGILQKNVPI | LYTASQACLQ | HPDVAAYKAN |
250 | 260 | 270 | 280 | 290 | 300 |
RDLIYKQLQQ | AVTGISNAAQ | ATASDDASQH | QGGGGGELAY | ALNNFDKQII | VDPLSFSEER |
310 | 320 | 330 | 340 | 350 | 360 |
FRPSLEERLE | SIISGAALMA | DSSCTRDDRR | ERIVAECNAV | RQALQDLLSE | YMGNAGRKER |
370 | 380 | 390 | 400 | 410 | 420 |
SDALNSAIDK | MTKKTRDLRR | QLRKAVMDHV | SDSFLETNVP | LLVLIEAAKN | GNEKEVKEYA |
430 | 440 | 450 | 460 | 470 | 480 |
QVFREHANKL | IEVANLACSI | SNNEEGVKLV | RMSASQLEAL | CPQVINAALA | LAAKPQSKLA |
490 | 500 | 510 | 520 | 530 | 540 |
QENMDLFKEQ | WEKQVRVLTD | AVDDITSIDD | FLAVSENHIL | EDVNKCVIAL | QEKDVDGLDR |
550 | 560 | 570 | 580 | 590 | 600 |
TAGAIRGRAA | RVIHVVTSEM | DNYEPGVYTE | KVLEATKLLS | NTVMPRFTEQ | VEAAVEALSS |
610 | 620 | 630 | 640 | 650 | 660 |
DPAQPMDENE | FIDASRLVYD | GIRDIRKAVL | MIRTPEELDD | SDFETEDFDV | RSRTSVQTED |
670 | 680 | 690 | 700 | 710 | 720 |
DQLIAGQSAR | AIMAQLPQEQ | KAKIAEQVAS | FQEEKSKLDA | EVSKWDDSGN | DIIVLAKQMC |
730 | 740 | 750 | 760 | 770 | 780 |
MIMMEMTDFT | RGKGPLKNTS | DVISAAKKIA | EAGSRMDKLG | RTIADHCPDS | ACKQDLLAYL |
790 | 800 | 810 | 820 | 830 | 840 |
QRIALYCHQL | NICSKVKAEV | QNLGGELVVS | GVDSAMSLIQ | AAKNLMNAVV | QTVKASYVAS |
850 | 860 | 870 | 880 | 890 | 900 |
TKYQKSQGMA | SLNLPAVSWK | MKAPEKKPLV | KREKQDETQT | KIKRASQKKH | VNPVQALSEF |
KAMDSI |