Descriptions

Myosin Va (MyoVa) is a protein that functions as a dimer for processive walking on actin filaments. Autoinhibition of MyoVa involves the motor domain (MD) and the globular tail domain (GTD), with the motor adopting a closed, autoinhibited state that is inactive for ATPase activity. This state prevents the unnecessary consumption of ATP and uncontrolled movement when not transporting cargo. MyoVa exists in several states, including closed, half-closed, transition, and open states. The closed state of MyoVa can be changed to a half-closed state when the d-strand temporarily dissociates from the GTD, resulting in the dynamic confirmation of the short side in the triangular-shaped structure, which is called the closed state. In the presence of both a GTBM-containing protein and Rab11a, the half-closed conformation undergoes a significant motion of both the MD and the lever arm (LA), resulting in the disassembly of the hinge structure, which is referred to as a transition state. Finally, the unstable transition conformation quickly shifts to the open conformation, allowing the GTPs to tightly associate with cargo and the MDs to hydrolyze ATP for the walking process. Notably, a single cargo binding of either a GTBM-binding protein or Rab11a is insufficient to effectively activate MyoVa.

Autoinhibitory domains (AIDs)

Target domain

1410-1793 (Globular tail domain, GTD)

Relief mechanism

Ligand binding, Partner binding

Assay

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

1 structures for P21271

Entry ID Method Resolution Chain Position Source
AF-P21271-F1 Predicted AlphaFoldDB

No variants for P21271

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for P21271

No associated diseases with P21271

11 regional properties for P21271

Type Name Position InterPro Accession
binding_site IQ motif, EF-hand binding site 764 - 786 IPR000048-1
binding_site IQ motif, EF-hand binding site 787 - 809 IPR000048-2
binding_site IQ motif, EF-hand binding site 812 - 834 IPR000048-3
binding_site IQ motif, EF-hand binding site 835 - 857 IPR000048-4
binding_site IQ motif, EF-hand binding site 860 - 882 IPR000048-5
binding_site IQ motif, EF-hand binding site 883 - 905 IPR000048-6
domain Myosin head, motor domain 63 - 763 IPR001609
domain Dilute domain 1496 - 1773 IPR002710
domain Myosin, N-terminal, SH3-like 8 - 60 IPR004009
domain Class V myosin, motor domain 83 - 750 IPR036103
domain Myosin 5b, cargo-binding domain 1444 - 1815 IPR037990

Functions

Description
EC Number
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

16 GO annotations of cellular component

Name Definition
actin cytoskeleton The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
apical cortex The region that lies just beneath the plasma membrane on the apical edge of a cell.
brush border The dense covering of microvilli on the apical surface of an epithelial cell in tissues such as the intestine, kidney, and choroid plexus; the microvilli aid absorption by increasing the surface area of the cell.
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
dendritic spine A small, membranous protrusion from a dendrite that forms a postsynaptic compartment, typically receiving input from a single presynapse. They function as partially isolated biochemical and an electrical compartments. Spine morphology is variable:they can be thin, stubby, mushroom, or branched, with a continuum of intermediate morphologies. They typically terminate in a bulb shape, linked to the dendritic shaft by a restriction. Spine remodeling is though to be involved in synaptic plasticity.
glutamatergic synapse A synapse that uses glutamate as a neurotransmitter.
membrane A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
myosin complex A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes.
neuronal cell body The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
perinuclear region of cytoplasm Cytoplasm situated near, or occurring around, the nucleus.
postsynapse The part of a synapse that is part of the post-synaptic cell.
postsynaptic actin cytoskeleton The actin cytoskeleton that is part of a postsynapse.
postsynaptic recycling endosome membrane The lipid bilayer surrounding a postsynaptic recycling endosome.
presynapse The part of a synapse that is part of the presynaptic cell.
Schaffer collateral - CA1 synapse A synapse between the Schaffer collateral axon of a CA3 pyramidal cell and a CA1 pyramidal cell.
vesicle Any small, fluid-filled, spherical organelle enclosed by membrane.

7 GO annotations of molecular function

Name Definition
actin filament binding Binding to an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
ATP hydrolysis activity Catalysis of the reaction
calmodulin binding Binding to calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
ionotropic glutamate receptor binding Binding to an ionotropic glutamate receptor. Ionotropic glutamate receptors bind glutamate and exert an effect through the regulation of ion channels.
microfilament motor activity A motor activity that generates movement along a microfilament, driven by ATP hydrolysis.
small GTPase binding Binding to a small monomeric GTPase.

15 GO annotations of biological process

Name Definition
actin filament organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
dendritic spine morphogenesis The process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.
endosomal transport The directed movement of substances mediated by an endosome, a membrane-bounded organelle that carries materials enclosed in the lumen or located in the endosomal membrane.
modulation of chemical synaptic transmission Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission.
neurotransmitter receptor transport, endosome to plasma membrane The directed movement of neurotransmitter receptor from the endosome to the plasma membrane in transport vesicles.
positive regulation of axon extension Any process that activates or increases the frequency, rate or extent of axon extension.
positive regulation of dendrite morphogenesis Any process that activates or increases the frequency, rate or extent of dendrite morphogenesis.
positive regulation of exosomal secretion Any process that activates or increases the frequency, rate or extent of exosomal secretion.
positive regulation of protein localization to plasma membrane Any process that activates or increases the frequency, rate or extent of protein localization to plasma membrane.
protein transmembrane transport The process in which a protein is transported across a membrane.
regulation of modification of postsynaptic structure Any process that modulates the frequency, rate or extent of modification of postsynaptic structure.
regulation of protein localization Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location.
synaptic vesicle recycling via endosome Synaptic vesicle recycling where vesicles endocytosed via clathrin-coated pits re-acidify and refill with neurotransmitters after passing through an endosomal intermediate.
vesicle transport along actin filament Movement of a vesicle along an actin filament, mediated by motor proteins.
vesicle-mediated transport in synapse Any vesicle-mediated transport that occurs in a synapse.

16 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q27991 MYH10 Myosin-10 Bos taurus (Bovine) SS
Q02440 MYO5A Unconventional myosin-Va Gallus gallus (Chicken) SS
Q5U651 RASIP1 Ras-interacting protein 1 Homo sapiens (Human) PR
B0I1T2 MYO1G Unconventional myosin-Ig Homo sapiens (Human) PR
Q9NQX4 MYO5C Unconventional myosin-Vc Homo sapiens (Human) SS
P35580 MYH10 Myosin-10 Homo sapiens (Human) SS
Q9Y4I1 MYO5A Unconventional myosin-Va Homo sapiens (Human) SS
Q9ULV0 MYO5B Unconventional myosin-Vb Homo sapiens (Human) SS
Q3U0S6 Rasip1 Ras-interacting protein 1 Mus musculus (Mouse) PR
Q61879 Myh10 Myosin-10 Mus musculus (Mouse) SS
Q99104 Myo5a Unconventional myosin-Va Mus musculus (Mouse) EV
E9Q634 Myo1e Unconventional myosin-Ie Mus musculus (Mouse) PR
Q64331 Myo6 Unconventional myosin-VI Mus musculus (Mouse) SS
Q9JLT0 Myh10 Myosin-10 Rattus norvegicus (Rat) SS
P70569 Myo5b Unconventional myosin-Vb Rattus norvegicus (Rat) SS
Q9M2K0 XI-J Myosin-16 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MSYSELYTRY TRVWIPDPDE VWRSAELTKD YKEGDKSLQL RLEDDTILEY PVDVQNNQVP
70 80 90 100 110 120
FLRNPDILVG ENDLTALSHL HEPAVLHNLK VRFLESNHIY TYCGIVLVAI NPYEQLPIYG
130 140 150 160 170 180
QDVIYAYSGQ NMGDMDPHIF AVAEEAYKQM ARDEKNQSII VSGESGAGKT VSAKYAMRYF
190 200 210 220 230 240
ATVGGSASDT NIEEKVLASS PIMEAIGNAK TTRNDNSSRF GKFIEIGFDK KYHIIGANMR
250 260 270 280 290 300
TYLLEKSRVV FQADDERNYH IFYQLCAAAS LPEFKELALT CAEDFFYTAH GGNTTIEGVN
310 320 330 340 350 360
DADDFEKTRQ ALTLLGVRDS HQISIFKIIA SILHLGSVEI QSERDGDSCS ISPQDEHLSN
370 380 390 400 410 420
FCSLLGIEHS QMEHWLCHRK LVTTSETYVK TMSLQQVVNA RDALAKHIYA QLFSWIVEHI
430 440 450 460 470 480
NKALHTSHKQ HSFIGVLDIY GFETFEINSF EQFCINYANE KLQQQFNSHV FKLEQEEYMK
490 500 510 520 530 540
EQIPWTLIDF YDNQPCIDLI EAKLGILDLL DEECKVPKGT DQNWAQKLYE RHSNSQHFQK
550 560 570 580 590 600
PRMSNTAFIV NHFADKVEYL SDGFLEKNRD TVYEEQINIL KASKFPLVAD LFHDDKDSAP
610 620 630 640 650 660
ATNTAKNRSS SKINVRSSRP LIKVPNKEHK KSVGYQFRTS LNLLMETLNA TTPHYVRCIK
670 680 690 700 710 720
PNDEKLPFHF DPKRAVQQLR ACGVLETIRI SAAGYPSRWT YHDFFNRYRV LMKKRELTNT
730 740 750 760 770 780
DKKNICKSVL ESLIKDPDKF QFGRTKIFFR AGQVAYLEKL RADKFREATI MIQKSVRGWL
790 800 810 820 830 840
QRVKYRRLRA ATLSLQRFCR GYLARRLAEH LRRTRAAIVF QKQYRMLKAR RAYRRVCRAT
850 860 870 880 890 900
VIIQSFTRAM FVRRNYRQVL MEHKATIIQK YARGWMARKR FLRERDAAIV IQCAFRRLKA
910 920 930 940 950 960
RQELKALKIE ARSAEHLKRL NVGMENKVVQ LQRKIDDQNK EFKTLSEQLS AVTSSHAVEV
970 980 990 1000 1010 1020
EKLKKELAHY QQNQEADTSL QLQEEVQSLR TELQKAHSER RVLEDAHNKE NGELRKRVAD
1030 1040 1050 1060 1070 1080
LEHENALLKD EKEYLNNQIL CQSKAESSQS SVEENLLMKK ELEEERSRYQ NLVKEYSQLE
1090 1100 1110 1120 1130 1140
QRYENLRDEQ TPGHRKNPSN QSSLESDSNY PSISTSEIGD TEDALQQVEE IGIEKAAMDM
1150 1160 1170 1180 1190 1200
TVFLKLQKRV RELEQERKKL QAQLEKGQQD SKKGQVEQQN NGLDVDQDAD IAYNSLKRQE
1210 1220 1230 1240 1250 1260
LESENKKLKN DLNELRKAVA DQAMQDNSTH SSPDSYSLLL NQLKLANEEL EVRKEEVLIL
1270 1280 1290 1300 1310 1320
RTQIMNADQR RLSGKNMEPN INARTSWPNS EKHVDQEDAI EAYHGVCQTN RLLEAQLQAQ
1330 1340 1350 1360 1370 1380
SLEHEEEVEH LKAQVEALKE EMDKQQQTFC QTLLLSPEAQ VEFGVQQEIS RLTNENLDFK
1390 1400 1410 1420 1430 1440
ELVEKLEKNE RKLKKQLKIY MKKVQDLEAA QALAQSDRRH HELTRQVTVQ RKEKDFQGML
1450 1460 1470 1480 1490 1500
EYHKEDEALL IRNLVTDLKP QMLSGTVPCL PAYILYMCIR HADYTNDDLK VHSLLSSTIN
1510 1520 1530 1540 1550 1560
GIKKVLKKHN DDFEMTSFWL SNTCRFLHCL KQYSGDEGFM TQNTAKQNEH CLKNFDLTEY
1570 1580 1590 1600 1610 1620
RQVLSDLSIQ IYQQLIKIAE GLLQPMIVSA MLENESIQGL SGVRPTGYRK RSSSMVDGEN
1630 1640 1650 1660 1670 1680
SYCLEAIVRQ MNSFHTVLCD QGLDPEIILQ VFKQLFYMIN AVTLNNLLLR KDACSWSTGM
1690 1700 1710 1720 1730 1740
QLRYNISQLE EWLRGKNLHQ SGAVQTMEPL IQAAQLLQLK KKTHEDAEAI CSLCTSLSTQ
1750 1760 1770 1780 1790 1800
QIVKILNLYT PLNEFEERVT VSFIRTIQAQ LQERNDPQQL LLDSKHVFPV LFPYNPSALT
1810
MDSIHIPACL NLEFLNEV