Descriptions

NFκB2 is a nuclear factor NFκB p100 subunit (p52 and its precursor p100), and plays pivotal role in the regulation of the inflammatory response to pathogens, autoimmune diseases, and cancerous cells. The five members of the NF-κB family are normally kept inactive in the cytoplasm by interaction with inhibitors called IκBs or the unprocessed forms of NF-κB1 and NF-κB2. The C-terminal ankyrin repeats of p100 allow it to serve as an IkappaB-like function. The ankyrin repeats interact with and shield the nuclear localization signal located at the end of Rel-homology domain (RHD) domain and DNA binding of Rel/NF-kappaB complexes. RHD domain mediates DNA binding.

Autoinhibitory domains (AIDs)

Target domain

39-350 (Rel-homology domain)

Relief mechanism

Cleavage, PTM

Assay

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

15 structures for P19838

Entry ID Method Resolution Chain Position Source
1MDI NMR - B 55-67 PDB
1MDJ NMR - B 55-67 PDB
1MDK NMR - B 55-67 PDB
1NFI X-ray 270 A B/D 248-354 PDB
1SVC X-ray 260 A P 2-365 PDB
2DBF NMR - A 806-893 PDB
2O61 X-ray 280 A B 40-352 PDB
3GUT X-ray 359 A B/D/F/H 41-352 PDB
7LEQ X-ray 224 A B 355-368 PDB
7LET X-ray 240 A B 355-368 PDB
7LF4 X-ray 285 A B/F 355-368 PDB
7LFC X-ray 210 A B 355-368 PDB
7RG4 X-ray 260 A B 331-370 PDB
7RG5 X-ray 215 A B 331-370 PDB
AF-P19838-F1 Predicted AlphaFoldDB

552 variants for P19838

Variant ID(s) Position Change Description Diseaes Association Provenance
rs1578735747
RCV001027600
62 E>missing Inherited Immunodeficiency Diseases [ClinVar] Yes ClinVar
dbSNP
CA357958699
RCV001027589
rs1578771120
RCV001374707
86 I>S Immunodeficiency, common variable, 12 [ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
RCV001027601
CA357958773
RCV001862409
rs1578771211
98 Q>* Inherited Immunodeficiency Diseases [ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
RCV000761318
rs1560679469
105 N>missing Immunodeficiency, common variable, 12 [ClinVar] Yes ClinVar
dbSNP
rs1724867456
RCV001327993
139 L>missing Immunodeficiency, common variable, 12 [ClinVar] Yes ClinVar
dbSNP
rs869320754
RCV000195130
155 A>missing Immunodeficiency, common variable, 12 [ClinVar] Yes ClinVar
dbSNP
rs1724875502
RCV001262328
175 L>* Immunodeficiency, common variable, 12 [ClinVar] Yes ClinVar
dbSNP
RCV001331150
rs778125529
CA3025944
223 S>N Immunodeficiency, common variable, 12 [ClinVar] Yes ClinGen
ClinVar
ExAC
dbSNP
gnomAD
RCV001262753
CA357960455
RCV001027598
RCV001027604
rs1578793312
283 R>* Immunodeficiency, common variable, 12 Inherited Immunodeficiency Diseases [ClinVar] Yes ClinGen
ClinVar
Ensembl
dbSNP
RCV000788230
RCV000611708
rs773694113
RCV001027605
301 S>missing Immunodeficiency, common variable, 12 Inherited Immunodeficiency Diseases [ClinVar] Yes ClinVar
dbSNP
RCV001027593
rs1578795536
335 R>missing Inherited Immunodeficiency Diseases [ClinVar] Yes ClinVar
dbSNP
RCV001027595
RCV001027594
rs1578809101
474 A>missing Inherited Immunodeficiency Diseases [ClinVar] Yes ClinVar
dbSNP
rs4648072
VAR_016269
CA3026192
RCV001284835
RCV000514841
506 M>V Immunodeficiency, common variable, 12 [ClinVar] Yes ClinGen
ClinVar
UniProt
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
RCV001027596
rs1578811073
RCV001374706
512 H>missing Immunodeficiency, common variable, 12 Inherited Immunodeficiency Diseases [ClinVar] Yes ClinVar
dbSNP
RCV001027599
rs1578811245
539 Q>* Inherited Immunodeficiency Diseases [ClinVar] Yes ClinVar
dbSNP
CA3026263
RCV000881374
RCV001286331
rs149211506
614 L>F Immunodeficiency, common variable, 12 [ClinVar] Yes ClinGen
ClinVar
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs1727845506
RCV001331149
675 A>V Immunodeficiency, common variable, 12 [ClinVar] Yes ClinVar
dbSNP
RCV001267366
CA3026381
RCV001880144
rs368017285
757 D>G Inborn genetic diseases [ClinVar] Yes ClinGen
ClinVar
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs1728635624
RCV001263439
890 A>missing Immunodeficiency, common variable, 12 [ClinVar] Yes ClinVar
dbSNP
rs754417859
CA3025772
4 D>E No ClinGen
ExAC
gnomAD
rs764715465
CA3025773
7 Y>H No ClinGen
ExAC
gnomAD
CA3025775
rs752031846
8 L>M No ClinGen
ExAC
TOPMed
gnomAD
rs1490669735
CA357957281
13 Q>E No ClinGen
gnomAD
CA357957284
rs1200938039
13 Q>R No ClinGen
gnomAD
rs966015688
CA103123588
16 H>L No ClinGen
TOPMed
gnomAD
CA357957317
rs1385709386
16 H>N No ClinGen
gnomAD
rs966015688
CA357957321
16 H>R No ClinGen
TOPMed
gnomAD
rs1364913100
CA357957334
18 D>A No ClinGen
gnomAD
CA3025795
rs750825184
19 P>L No ClinGen
ExAC
gnomAD
CA357957340
rs1424689902
19 P>S No ClinGen
TOPMed
CA3025796
rs370685242
20 S>C No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA357957363
rs1347167148
23 H>D No ClinGen
TOPMed
gnomAD
CA3025797
rs780417051
23 H>R No ClinGen
ExAC
TOPMed
gnomAD
rs749502665
CA3025798
24 T>A No ClinGen
ExAC
gnomAD
rs778867861
CA3025800
25 I>V No ClinGen
ExAC
gnomAD
CA357957387
rs1454525455
26 F>L No ClinGen
TOPMed
gnomAD
CA357957398
rs1485949241
28 P>S No ClinGen
TOPMed
CA103123590
rs899498254
30 V>I No ClinGen
TOPMed
gnomAD
CA357957435
rs1359408485
33 P>L No ClinGen
TOPMed
gnomAD
rs748222621
CA3025801
35 M>I No ClinGen
ExAC
gnomAD
rs1382519896
CA357957449
35 M>T No ClinGen
gnomAD
rs1285815126
CA357957447
35 M>V No ClinGen
TOPMed
gnomAD
CA3025802
rs572127952
39 T>A No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA357957497
rs1183827374
40 D>G No ClinGen
gnomAD
CA103123982
rs201487209
42 P>A No ClinGen
Ensembl
CA103124400
COSM167280
rs1040399901
56 R>C large_intestine [Cosmic] No ClinGen
cosmic curated
TOPMed
rs1377309694
CA357957634
58 R>C No ClinGen
gnomAD
CA357957682
rs1170050395
65 S>A No ClinGen
gnomAD
RCV000788275
CA357957722
rs1578735801
71 G>V No ClinGen
ClinVar
Ensembl
dbSNP
CA357957731
rs1304282431
73 S>T No ClinGen
gnomAD
CA357957764
rs1346783408
77 N>S No ClinGen
gnomAD
rs1300115442
CA357957787
80 S>C No ClinGen
TOPMed
gnomAD
rs1326698146
CA357957799
82 P>S No ClinGen
gnomAD
rs1560679373
CA357958702
87 C>R No ClinGen
Ensembl
rs1387606271
CA357958704
87 C>Y No ClinGen
gnomAD
CA3025854
rs763286279
88 N>S No ClinGen
ExAC
TOPMed
gnomAD
CA3025855
rs764399130
89 Y>F No ClinGen
ExAC
gnomAD
rs751657227
CA3025856
92 P>S No ClinGen
ExAC
gnomAD
rs767444867
CA3025858
95 V>L No ClinGen
ExAC
gnomAD
CA357958768
rs1578771197
RCV001027591
97 V>D No ClinGen
ClinVar
Ensembl
dbSNP
CA3025859
rs750404195
97 V>I No ClinGen
ExAC
gnomAD
CA357958799
RCV000998246
rs1578771216
102 N>D No ClinGen
ClinVar
Ensembl
dbSNP
rs1578771232
CA357958829
106 I>V No ClinGen
Ensembl
CA3025862
rs749065614
RCV001327030
107 H>Y No ClinGen
ClinVar
ExAC
dbSNP
gnomAD
rs968064966
CA103127456
117 H>Q No ClinGen
Ensembl
CA357958910
rs1241312324
118 C>R No ClinGen
gnomAD
rs747658024
CA3025865
120 D>G No ClinGen
ExAC
TOPMed
gnomAD
rs754689167
CA3025864
120 D>N No ClinGen
ExAC
gnomAD
CA3025863
rs754689167
120 D>Y No ClinGen
ExAC
gnomAD
rs1482484326
CA357958952
124 T>A No ClinGen
gnomAD
rs770371252
CA3025869
128 G>E No ClinGen
ExAC
gnomAD
rs776055694
CA3025870
131 D>A No ClinGen
ExAC
gnomAD
rs1309700083
CA357958996
131 D>N No ClinGen
TOPMed
gnomAD
rs761899477
CA3025874
135 G>A No ClinGen
ExAC
TOPMed
gnomAD
CA3025873
rs199574943
135 G>C No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs761899477
CA357959023
COSM222928
135 G>D skin [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
rs199574943
RCV000998247
CA3025872
135 G>S No ClinGen
ClinVar
1000Genomes
ExAC
TOPMed
dbSNP
gnomAD
CA357959047
rs1460343437
137 A>T No ClinGen
TOPMed
gnomAD
CA357959076
RCV000788831
rs1578785141
141 I>T No ClinGen
ClinVar
Ensembl
dbSNP
CA3025888
rs749720974
142 L>F No ClinGen
ExAC
rs1481035824
CA357959098
145 T>S No ClinGen
gnomAD
rs1285473658
CA357959177
156 R>Q No ClinGen
gnomAD
rs1233818072
CA357959203
160 A>T No ClinGen
TOPMed
CA357959208
rs1354534120
160 A>V No ClinGen
TOPMed
rs772170990
CA3025892
162 I>M No ClinGen
ExAC
gnomAD
CA3025891
rs762107099
162 I>T No ClinGen
ExAC
gnomAD
CA103128506
rs989172843
163 R>K No ClinGen
Ensembl
CA3025893
rs376562815
164 G>S No ClinGen
ESP
ExAC
gnomAD
rs1335157467
CA357959238
165 Y>C No ClinGen
TOPMed
RCV000788311
rs1578785260
166 N>missing No ClinVar
dbSNP
CA357959249
rs1313338016
167 P>S No ClinGen
TOPMed
rs945312107
CA103128507
169 L>F No ClinGen
TOPMed
rs1490382917
CA357959274
171 V>L No ClinGen
gnomAD
CA3025896
rs753794335
172 H>D No ClinGen
ExAC
rs1244646904
CA357959308
176 A>S No ClinGen
gnomAD
rs765087404
CA3025898
177 Y>C No ClinGen
ExAC
gnomAD
RCV000785730
CA357959314
rs1425802039
177 Y>N No ClinGen
ClinVar
dbSNP
gnomAD
rs370312017
CA3025900
183 G>R No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs751158419
CA3025902
185 D>E No ClinGen
ExAC
TOPMed
gnomAD
rs777291215
CA3025901
185 D>Y No ClinGen
ExAC
gnomAD
rs201874528
CA3025903
186 R>Q No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1304978961
CA357959375
187 Q>K No ClinGen
gnomAD
rs1407374916
CA357959472
191 R>Q No ClinGen
gnomAD
CA103128708
rs865962183
COSM1485563
191 R>W breast [Cosmic] No ClinGen
cosmic curated
Ensembl
CA103128709
rs924808846
192 E>A No ClinGen
TOPMed
CA357959489
rs1416497348
193 K>N No ClinGen
TOPMed
gnomAD
CA16618021
RCV000478377
rs1064797068
195 L>V No ClinGen
ClinVar
Ensembl
dbSNP
RCV000998248
rs1578787945
196 I>missing No ClinVar
dbSNP
rs370846760
CA103128710
197 R>C No ClinGen
ESP
gnomAD
CA3025935
rs561236472
RCV000896881
197 R>H No ClinGen
ClinVar
1000Genomes
ExAC
TOPMed
dbSNP
gnomAD
rs561236472
CA357959512
197 R>L No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs1289614962
CA357959524
199 A>E No ClinGen
gnomAD
COSM1049555
CA3025936
rs774227974
201 L>M endometrium [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
rs112424808
CA103128711
202 Q>L No ClinGen
Ensembl
rs1007366668
CA103128712
204 T>A No ClinGen
Ensembl
CA103128713
rs751252206
207 M>V No ClinGen
Ensembl
CA357959603
rs1325477490
211 V>M No ClinGen
TOPMed
gnomAD
rs1277862289
CA357959616
213 R>W No ClinGen
gnomAD
rs200893106
CA3025941
215 M>I No ClinGen
ExAC
gnomAD
CA357959675
rs1471643896
221 P>L No ClinGen
gnomAD
rs747362564
CA3025945
224 T>I No ClinGen
ExAC
gnomAD
rs781361488
CA3025947
227 F>L No ClinGen
ExAC
gnomAD
rs968767176
CA103128715
229 R>S No ClinGen
TOPMed
CA3025948
rs558348827
230 R>C No ClinGen
ExAC
gnomAD
rs146936581
RCV001531399
RCV000520669
CA3025949
230 R>H No ClinGen
ClinVar
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs146936581
CA3025950
230 R>L No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1553934187
RCV000521084
234 V>missing No ClinVar
dbSNP
rs768698948
CA357959752
234 V>L No ClinGen
ExAC
TOPMed
gnomAD
CA3025952
rs768698948
234 V>M No ClinGen
ExAC
TOPMed
gnomAD
rs1578788175
CA357959760
235 V>G No ClinGen
Ensembl
CA103128716
rs993488882
235 V>I No ClinGen
TOPMed
CA103128717
rs200186183
238 A>T No ClinGen
TOPMed
gnomAD
rs1164768587
CA357959918
244 A>T No ClinGen
gnomAD
RCV000998249
CA357959928
rs1578790471
244 A>V No ClinGen
ClinVar
Ensembl
dbSNP
rs1369756216
CA357959949
246 N>S No ClinGen
TOPMed
gnomAD
CA3025994
rs777489019
253 V>L No ClinGen
ExAC
gnomAD
CA357960064
rs1578790536
260 G>A No ClinGen
Ensembl
rs1057518392
RCV000414558
CA16042543
264 G>E No ClinGen
ClinVar
Ensembl
dbSNP
CA357960132
rs1560692699
270 L>P No ClinGen
Ensembl
CA103128864
rs1017383520
274 K>R No ClinGen
TOPMed
gnomAD
rs1453366376
CA357960176
276 Q>H No ClinGen
gnomAD
RCV000788600
rs1578790573
RCV001027602
277 K>missing No ClinVar
dbSNP
CA357960427
RCV001027592
rs1578793298
280 I>M No ClinGen
ClinVar
Ensembl
dbSNP
RCV001296192
rs1725424009
283 R>P No ClinVar
dbSNP
CA357960483
rs1560694362
RCV000762101
285 Y>N No ClinGen
ClinVar
Ensembl
dbSNP
CA357960515
rs1328954485
287 E>A No ClinGen
gnomAD
rs1362178758
CA357960520
287 E>D No ClinGen
TOPMed
rs1057518403
CA16042474
RCV000413927
287 E>K No ClinGen
ClinVar
Ensembl
dbSNP
rs1211213470
CA357960545
289 E>G No ClinGen
TOPMed
gnomAD
CA357960552
rs1578793375
290 N>H No ClinGen
Ensembl
rs1244496072
CA357960579
COSM3380769
292 G>R pancreas [Cosmic] No ClinGen
cosmic curated
TOPMed
CA103129078
rs781210011
297 F>Y No ClinGen
Ensembl
CA357960653
RCV000523641
rs1553934600
298 G>R No ClinGen
ClinVar
Ensembl
dbSNP
CA357960670
rs1560694437
299 D>G No ClinGen
Ensembl
rs934369353
CA103129079
300 F>I No ClinGen
TOPMed
rs1028039837
CA103129258
311 I>V No ClinGen
gnomAD
CA357960803
rs1419437025
314 K>Q No ClinGen
TOPMed
CA3026030
rs759894336
321 I>T No ClinGen
ExAC
TOPMed
gnomAD
COSM1538934
CA3026029
rs777076983
321 I>V lung liver [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
CA3026032
rs752866944
324 T>K No ClinGen
ExAC
gnomAD
rs765552855
CA3026031
324 T>P No ClinGen
ExAC
CA3026033
rs201065307
325 K>N No ClinGen
ExAC
gnomAD
rs1237040358
CA357960888
326 P>S No ClinGen
TOPMed
rs1725580228
RCV001239655
327 A>missing No ClinVar
dbSNP
CA357960897
rs1437539113
327 A>V No ClinGen
gnomAD
rs143817570
CA3026037
COSM78167
334 R>Q ovary large_intestine [Cosmic] No ClinGen
cosmic curated
ESP
ExAC
TOPMed
gnomAD
CA357960977
rs755801598
339 L>F No ClinGen
ExAC
TOPMed
gnomAD
CA357960980
rs1226296416
340 E>* No ClinGen
TOPMed
CA103129261
rs977929741
346 P>S No ClinGen
gnomAD
rs1578805410
RCV001008506
357 E>missing No ClinVar
dbSNP
rs747606607
CA3026064
361 R>K No ClinGen
ExAC
gnomAD
CA357750324
rs1473182732
363 R>H No ClinGen
gnomAD
CA3026065
rs771511171
366 L>F No ClinGen
ExAC
gnomAD
CA3026066
rs371719137
COSM170770
371 S>L large_intestine [Cosmic] No ClinGen
cosmic curated
ESP
ExAC
TOPMed
gnomAD
rs1321434628
CA357750411
375 G>D No ClinGen
TOPMed
gnomAD
CA3026069
rs150233754
375 G>S No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA102680485
rs1024890793
COSM200211
376 G>S large_intestine [Cosmic] No ClinGen
cosmic curated
TOPMed
gnomAD
CA3026072
rs774560110
377 G>D No ClinGen
ExAC
gnomAD
rs1228688860
CA357750424
378 S>G No ClinGen
gnomAD
CA3026073
rs761774576
378 S>N No ClinGen
ExAC
TOPMed
gnomAD
rs1228688860
CA357750423
378 S>R No ClinGen
gnomAD
rs1578805527
CA357750434
379 G>A No ClinGen
Ensembl
rs767533475
CA3026074
379 G>R No ClinGen
ExAC
TOPMed
gnomAD
CA3026075
rs750386857
380 A>V No ClinGen
ExAC
gnomAD
CA3026078
rs753561118
381 G>R No ClinGen
ExAC
TOPMed
gnomAD
rs758005910
CA3026082
384 G>D No ClinGen
ExAC
gnomAD
rs376020000
CA3026081
384 G>S No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs756958327
CA3026084
385 G>R No ClinGen
ExAC
TOPMed
gnomAD
rs1471828685
CA357750470
386 G>V No ClinGen
gnomAD
CA3026085
rs770371198
387 M>I No ClinGen
ExAC
TOPMed
gnomAD
rs919393668
CA102680562
387 M>T No ClinGen
Ensembl
rs1426491900
CA357750473
387 M>V No ClinGen
gnomAD
rs1374371369
CA357750494
390 S>G No ClinGen
gnomAD
CA3026086
rs780529668
392 G>S No ClinGen
ExAC
TOPMed
gnomAD
rs1275150873
CA357750527
395 G>A No ClinGen
gnomAD
rs201183726
CA102680596
395 G>R No ClinGen
Ensembl
rs1361486298
CA357750532
396 G>D No ClinGen
Ensembl
rs535214258
CA357750539
397 T>I No ClinGen
1000Genomes
ExAC
gnomAD
rs535214258
CA3026091
397 T>S No ClinGen
1000Genomes
ExAC
gnomAD
CA3026092
rs772141760
COSM368177
398 G>E lung [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
CA357750547
rs1205899256
399 S>G No ClinGen
gnomAD
rs1473283013
CA357750548
399 S>N No ClinGen
gnomAD
rs1560703895
CA357750554
400 T>A No ClinGen
Ensembl
rs1560703916
CA357750562
401 G>A No ClinGen
Ensembl
rs773215129
CA3026093
401 G>S No ClinGen
ExAC
gnomAD
CA357750587
rs1197135991
403 G>V No ClinGen
gnomAD
rs573164232
CA3026108
404 Y>C No ClinGen
1000Genomes
ExAC
gnomAD
CA357750600
rs1444450766
405 S>I No ClinGen
gnomAD
rs1200842985
CA357750605
406 F>V No ClinGen
TOPMed
CA357750620
rs1387837873
408 H>L No ClinGen
gnomAD
CA357750630
rs1461019247
409 Y>F No ClinGen
gnomAD
CA357750649
rs1163517867
412 P>S No ClinGen
gnomAD
CA357750655
rs1350194292
413 T>A No ClinGen
gnomAD
CA357750658
rs1392377047
413 T>I No ClinGen
gnomAD
CA357750662
rs1403407081
414 Y>C No ClinGen
gnomAD
rs369442929
CA3026110
415 G>S No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA357750690
rs1458854781
418 T>S No ClinGen
TOPMed
CA357750705
rs1226729977
420 H>Q No ClinGen
gnomAD
rs747060104
CA3026112
420 H>R No ClinGen
ExAC
gnomAD
rs1222242764
CA357750707
421 P>A No ClinGen
gnomAD
rs1222242764
CA357750706
421 P>T No ClinGen
gnomAD
CA3026113
rs770903327
422 G>E No ClinGen
ExAC
gnomAD
CA357750718
rs776457144
423 T>A No ClinGen
ExAC
gnomAD
rs1212212163
CA357750720
423 T>S No ClinGen
gnomAD
rs776457144
CA3026114
423 T>S No ClinGen
ExAC
gnomAD
CA357750763
rs1191100232
430 M>V No ClinGen
gnomAD
CA357750787
rs1246690791
433 G>R No ClinGen
gnomAD
CA3026126
rs56280473
434 T>N No ClinGen
ExAC
TOPMed
gnomAD
CA102681833
rs56280473
434 T>S No ClinGen
ExAC
TOPMed
gnomAD
CA3026128
rs748505860
435 M>I No ClinGen
ExAC
gnomAD
CA357750813
rs779199620
435 M>R No ClinGen
ExAC
TOPMed
gnomAD
rs779199620
RCV000788710
CA3026127
435 M>T No ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
COSM1538933
CA357750823
rs758656960
436 D>E lung [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
rs777949092
CA3026130
437 T>A No ClinGen
ExAC
TOPMed
gnomAD
CA3026131
rs747186194
437 T>N No ClinGen
ExAC
gnomAD
CA357750824
rs777949092
437 T>P No ClinGen
ExAC
TOPMed
gnomAD
rs951538664
CA102681852
439 S>P No ClinGen
TOPMed
rs770946957
CA3026132
440 K>E No ClinGen
ExAC
TOPMed
gnomAD
rs776709082
CA3026133
440 K>R No ClinGen
ExAC
TOPMed
gnomAD
rs183929764
CA102681857
442 D>H No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
CA3026134
rs183929764
442 D>Y No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs149548281
CA102681864
445 G>D No ClinGen
ESP
TOPMed
CA102681869
rs756234799
446 C>G No ClinGen
Ensembl
rs202196813
CA3026136
447 D>N No ClinGen
ExAC
TOPMed
gnomAD
rs202196813
CA357750888
447 D>Y No ClinGen
ExAC
TOPMed
gnomAD
CA357750900
rs1304497007
448 K>N No ClinGen
gnomAD
rs1466545002
CA357750897
448 K>R No ClinGen
gnomAD
CA357750908
rs1404499106
449 S>R No ClinGen
gnomAD
CA357750912
rs1560706282
450 D>G No ClinGen
Ensembl
CA102681876
rs758007973
450 D>Y No ClinGen
Ensembl
rs1560706306
RCV000762102
453 N>missing No ClinVar
dbSNP
CA3026139
rs774174368
454 T>P No ClinGen
ExAC
gnomAD
rs761486898
CA3026140
457 L>F No ClinGen
ExAC
TOPMed
gnomAD
rs766947944
CA3026141
460 K>* No ClinGen
ExAC
gnomAD
rs749931994
CA3026142
461 V>L No ClinGen
ExAC
gnomAD
rs144132174
CA3026143
462 I>T No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA357751022
rs753109613
466 E>D No ClinGen
ExAC
TOPMed
gnomAD
rs753109613
CA3026145
466 E>D No ClinGen
ExAC
TOPMed
gnomAD
rs765742100
CA3026144
466 E>K No ClinGen
ExAC
TOPMed
gnomAD
RCV000998252
rs1578809017
467 Q>missing No ClinVar
dbSNP
rs939459600
RCV000788218
CA357751024
467 Q>* No ClinGen
ClinVar
TOPMed
dbSNP
gnomAD
rs939459600
CA102681935
467 Q>E No ClinGen
TOPMed
gnomAD
CA3026146
rs113440082
468 D>G No ClinGen
ExAC
gnomAD
rs1249624682
CA357751042
469 Q>R No ClinGen
gnomAD
rs1178180588
CA357751064
472 S>I No ClinGen
gnomAD
CA3026148
rs751784926
472 S>R No ClinGen
ExAC
gnomAD
rs1337707554
CA357751066
473 E>K No ClinGen
TOPMed
CA3026149
rs201777128
474 A>G No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1029260090
CA102681943
474 A>S No ClinGen
Ensembl
CA3026150
rs368857298
475 T>I No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA3026153
RCV000969194
rs56147914
476 V>F No ClinGen
ClinVar
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
CA3026152
rs56147914
476 V>I No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs370612125
CA102681963
479 G>V No ClinGen
Ensembl
rs1387665261
CA357751128
483 L>R No ClinGen
gnomAD
CA357751134
rs768572248
484 T>K No ClinGen
ExAC
TOPMed
gnomAD
CA3026155
rs768572248
484 T>M No ClinGen
ExAC
TOPMed
gnomAD
CA3026157
rs761427508
487 T>A No ClinGen
ExAC
TOPMed
gnomAD
rs4648065
CA3026158
VAR_016268
RCV000972725
489 T>I No ClinGen
ClinVar
UniProt
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs1343662720
CA357751166
490 K>Q No ClinGen
gnomAD
CA3026160
rs760208617
492 E>D No ClinGen
ExAC
TOPMed
gnomAD
CA3026159
rs772636272
492 E>G No ClinGen
ExAC
gnomAD
CA357751182
rs1202062110
492 E>K No ClinGen
gnomAD
rs376402199
CA3026161
493 S>R No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA3026162
rs753234250
494 A>S No ClinGen
ExAC
gnomAD
rs370018067
CA3026163
494 A>V No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs764457992
CA3026164
495 G>R No ClinGen
ExAC
gnomAD
rs1390923466
CA357751203
495 G>V No ClinGen
gnomAD
CA357751204
rs1411703511
496 V>I No ClinGen
gnomAD
rs751909408
CA3026165
497 Q>H No ClinGen
ExAC
gnomAD
rs532849982
CA102682031
498 D>N No ClinGen
TOPMed
CA3026189
rs201395077
499 N>K No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA102682668
rs757317367
500 L>I No ClinGen
Ensembl
rs1333934885
CA357751249
501 F>L No ClinGen
gnomAD
rs753960003
CA3026191
502 L>V No ClinGen
ExAC
gnomAD
rs370232532
CA102682678
504 K>Q No ClinGen
ESP
TOPMed
rs1445140594
CA357751289
507 Q>E No ClinGen
gnomAD
CA357751301
rs1241657198
508 L>P No ClinGen
TOPMed
gnomAD
CA357751321
rs548137186
511 R>S No ClinGen
ExAC
TOPMed
gnomAD
CA357751331
rs1408261872
513 A>T No ClinGen
gnomAD
rs777364800
CA3026195
514 N>S No ClinGen
ExAC
gnomAD
rs1160281218
CA357751366
518 D>A No ClinGen
TOPMed
gnomAD
rs770559726
CA3026197
RCV001245710
518 D>N No ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
CA102682706
rs912960525
519 Y>F No ClinGen
TOPMed
CA3026199
rs767590342
520 A>T No ClinGen
ExAC
TOPMed
gnomAD
rs769204159
CA3026200
520 A>V No ClinGen
ExAC
TOPMed
gnomAD
CA357751384
rs1416049980
521 V>L No ClinGen
gnomAD
rs762191642
CA3026202
522 T>I No ClinGen
ExAC
gnomAD
CA357751407
rs1320374807
525 V>M No ClinGen
gnomAD
rs894361895
CA102682749
527 M>I No ClinGen
Ensembl
rs1223196343
CA357751423
527 M>L No ClinGen
gnomAD
COSM144954
CA3026206
rs139575566
531 V>I central_nervous_system breast [Cosmic] No ClinGen
cosmic curated
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs150281816
CA3026208
RCV000954092
533 R>H No ClinGen
ClinVar
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs749431614
CA102682782
535 L>V No ClinGen
Ensembl
CA102682784
rs888119577
536 T>A No ClinGen
Ensembl
rs765191169
CA3026209
538 V>A No ClinGen
ExAC
gnomAD
rs1183147873
CA357751488
538 V>L No ClinGen
TOPMed
gnomAD
rs1305790811
CA357751495
539 Q>L No ClinGen
Ensembl
CA357751512
rs1468899754
541 E>G No ClinGen
gnomAD
rs1158531427
CA357751518
542 N>H No ClinGen
gnomAD
CA357751524
rs1426432122
543 G>R No ClinGen
gnomAD
RCV000910263
rs147574894
CA3026226
551 I>V No ClinGen
ClinVar
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
CA357751624
rs1243895642
555 H>R No ClinGen
TOPMed
CA357751643
rs1459962593
558 L>F No ClinGen
TOPMed
CA3026228
rs776670245
565 V>I No ClinGen
ExAC
TOPMed
gnomAD
RCV000895758
CA3026230
VAR_016270
rs4648085
566 T>I No ClinGen
ClinVar
UniProt
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs1352596520
CA357751696
567 S>T No ClinGen
TOPMed
CA357751704
rs1370387176
568 G>C No ClinGen
TOPMed
gnomAD
CA357751703
rs1370387176
568 G>R No ClinGen
TOPMed
gnomAD
rs200626732
CA3026231
569 L>F No ClinGen
1000Genomes
ExAC
gnomAD
CA357751751
rs1560711026
575 I>V No ClinGen
Ensembl
CA357751765
rs1238976982
577 M>L No ClinGen
TOPMed
rs780928731
CA3026234
577 M>T No ClinGen
ExAC
gnomAD
CA3026235
rs4648086
VAR_016271
578 R>K No ClinGen
UniProt
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
rs1212406721
CA357751789
580 D>Y No ClinGen
gnomAD
rs779678187
CA3026237
582 Y>H No ClinGen
ExAC
gnomAD
rs748712723
CA3026238
583 Q>K No ClinGen
ExAC
gnomAD
COSM219325
CA102686323
rs748549995
584 T>M breast [Cosmic] No ClinGen
cosmic curated
Ensembl
rs1261412487
CA357751851
587 H>L No ClinGen
gnomAD
CA357751846
rs1259119314
587 H>Y No ClinGen
TOPMed
gnomAD
CA3026253
rs767318470
590 V>A No ClinGen
ExAC
gnomAD
CA357751873
rs1187853840
591 I>V No ClinGen
gnomAD
CA3026255
rs755827011
596 D>E No ClinGen
ExAC
rs750210825
CA3026254
596 D>N No ClinGen
ExAC
gnomAD
rs1412434365
CA357751924
598 V>A No ClinGen
gnomAD
CA102686335
rs898072521
598 V>M No ClinGen
TOPMed
gnomAD
CA3026257
rs55661548
599 E>A No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
rs535706427
CA3026256
599 E>K No ClinGen
1000Genomes
ExAC
gnomAD
rs11556612
CA102686350
607 D>H No ClinGen
ExAC
gnomAD
rs11556612
CA3026260
607 D>N No ClinGen
ExAC
gnomAD
COSM107259
CA102686356
rs144066812
610 L>F skin [Cosmic] No ClinGen
cosmic curated
Ensembl
CA102686359
rs1036891634
612 D>G No ClinGen
TOPMed
COSM1049569
rs374903458
CA3026261
613 R>C large_intestine endometrium [Cosmic] No ClinGen
cosmic curated
ESP
ExAC
gnomAD
COSM2951878
CA3026262
rs773613546
613 R>H large_intestine [Cosmic] No ClinGen
cosmic curated
ExAC
TOPMed
gnomAD
rs770105175
CA3026264
615 G>S No ClinGen
ExAC
gnomAD
CA3026265
rs775599472
616 N>Y No ClinGen
ExAC
gnomAD
rs749489735
CA3026266
619 L>M No ClinGen
ExAC
gnomAD
rs201559647
CA357752061
621 L>I No ClinGen
TOPMed
gnomAD
rs201559647
CA102686383
621 L>V No ClinGen
TOPMed
gnomAD
CA3026268
rs774361550
622 A>G No ClinGen
ExAC
TOPMed
gnomAD
rs1252330766
CA357752072
623 A>T No ClinGen
gnomAD
rs767408358
CA3026270
624 K>R No ClinGen
ExAC
gnomAD
CA357752084
rs1156870619
625 E>Q No ClinGen
gnomAD
CA3026271
rs558097730
627 H>R No ClinGen
1000Genomes
ExAC
gnomAD
rs766156098
CA3026273
632 S>G No ClinGen
ExAC
gnomAD
rs1433149808
CA357752134
632 S>N No ClinGen
gnomAD
rs569559369
CA102686431
633 I>T No ClinGen
gnomAD
CA357752140
rs1312469339
633 I>V No ClinGen
gnomAD
CA357752154
rs1393451792
635 L>F No ClinGen
TOPMed
gnomAD
rs1393451792
CA357752153
635 L>V No ClinGen
TOPMed
gnomAD
CA357752163
rs1335623065
636 K>R No ClinGen
gnomAD
CA357752167
rs1235666404
637 H>D No ClinGen
TOPMed
gnomAD
CA357752168
rs1235666404
637 H>Y No ClinGen
TOPMed
gnomAD
CA3026276
rs764897996
638 K>Q No ClinGen
ExAC
gnomAD
rs1251484219
CA357752191
640 A>T No ClinGen
gnomAD
rs891064864
CA102686452
641 A>T No ClinGen
Ensembl
CA357752223
rs1481504006
645 D>E No ClinGen
gnomAD
CA357752233
rs781759362
647 P>S No ClinGen
ExAC
TOPMed
gnomAD
CA3026279
rs781759362
647 P>T No ClinGen
ExAC
TOPMed
gnomAD
rs1175205869
CA357752242
648 N>S No ClinGen
TOPMed
gnomAD
rs375088091
CA3026280
649 G>R No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs756468288
CA3026281
650 D>H No ClinGen
ExAC
gnomAD
CA357752274
rs1185315958
651 G>A No ClinGen
TOPMed
rs1560716462
CA357752259
651 G>S No ClinGen
Ensembl
rs776357090
CA3026309
654 A>G No ClinGen
ExAC
gnomAD
rs113549494
CA102686849
654 A>T No ClinGen
Ensembl
rs1460756330
CA357752295
655 I>L No ClinGen
TOPMed
CA102686858
rs969568429
658 A>V No ClinGen
Ensembl
rs1210261634
CA357752332
660 M>R No ClinGen
TOPMed
rs1468032850
CA357752339
661 S>N No ClinGen
gnomAD
rs1242830185
CA357752347
662 N>S No ClinGen
gnomAD
rs769653890
CA3026311
663 S>G No ClinGen
ExAC
gnomAD
rs1354029165
CA357752362
664 L>P No ClinGen
Ensembl
CA102686882
rs948787905
667 L>V No ClinGen
TOPMed
CA357752401
rs1475745534
671 V>M No ClinGen
gnomAD
CA102686887
rs1016498801
672 A>G No ClinGen
Ensembl
rs751054953
CA3026315
673 A>T No ClinGen
ExAC
gnomAD
CA357752428
rs1380630328
676 D>N No ClinGen
TOPMed
CA3026317
rs766900573
677 V>I No ClinGen
ExAC
TOPMed
gnomAD
rs1578828182
CA357752494
685 G>E No ClinGen
Ensembl
rs934744465
CA102686929
685 G>R No ClinGen
TOPMed
rs1355627768
CA357752498
686 R>C No ClinGen
TOPMed
gnomAD
rs148097278
CA102686951
686 R>H No ClinGen
ESP
TOPMed
gnomAD
CA3026320
rs779211179
691 L>V No ClinGen
ExAC
gnomAD
rs1553937650
RCV000520481
CA357752545
694 E>* No ClinGen
ClinVar
Ensembl
dbSNP
rs757232492
CA3026323
696 D>N No ClinGen
ExAC
TOPMed
gnomAD
rs1285582042
CA357752570
697 N>S No ClinGen
gnomAD
rs111293796
COSM3365437
CA102686985
701 A>T kidney [Cosmic] No ClinGen
cosmic curated
Ensembl
CA3026326
rs781202431
701 A>V No ClinGen
ExAC
gnomAD
rs141844350
CA3026327
703 C>F No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA357752654
rs1236513600
709 D>N No ClinGen
gnomAD
VAR_016272
RCV000969195
CA3026353
rs4648099
711 H>Q No ClinGen
ClinVar
UniProt
1000Genomes
ESP
ExAC
TOPMed
dbSNP
gnomAD
CA357752671
rs1215372705
711 H>Y No ClinGen
gnomAD
CA357752676
rs1436404980
712 V>M No ClinGen
gnomAD
rs376030164
CA102687223
714 S>R No ClinGen
ESP
TOPMed
CA357752719
rs1198609105
716 T>A No ClinGen
gnomAD
rs760077365
CA3026354
718 D>N No ClinGen
ExAC
gnomAD
rs765730757
CA3026355
729 R>G No ClinGen
ExAC
TOPMed
gnomAD
CA357752919
rs1372537183
732 T>A No ClinGen
TOPMed
rs370433110
CA3026357
733 R>M No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1403630346
CA357752944
734 L>M No ClinGen
TOPMed
rs889739551
CA102687245
735 A>T No ClinGen
TOPMed
rs1357733153
CA357753615
748 E>G No ClinGen
gnomAD
rs750585384
CA3026380
754 Y>C No ClinGen
ExAC
gnomAD
rs1206315302
CA357753673
756 L>M No ClinGen
gnomAD
CA3026383
rs764230559
760 W>R No ClinGen
ExAC
TOPMed
gnomAD
CA102688805
rs754058922
762 N>S No ClinGen
gnomAD
CA357753791
rs1560720653
763 A>E No ClinGen
Ensembl
CA3026384
rs754851506
764 G>E No ClinGen
ExAC
gnomAD
CA102688825
rs964387720
766 D>H No ClinGen
TOPMed
rs778809251
CA3026385
768 G>R No ClinGen
ExAC
gnomAD
rs1364255980
CA357753867
769 V>D No ClinGen
gnomAD
CA357754038
rs1299091738
778 M>I No ClinGen
TOPMed
CA102688836
rs369716580
778 M>T No ClinGen
ESP
rs1578834273
CA357754047
779 A>S No ClinGen
Ensembl
rs758127477
CA3026387
779 A>V No ClinGen
ExAC
gnomAD
rs1218498420
CA357754134
783 Q>P No ClinGen
TOPMed
CA357754398
rs1236465875
789 N>S No ClinGen
TOPMed
CA3026413
rs748652265
790 G>A No ClinGen
ExAC
TOPMed
gnomAD
rs1227116065
CA357754430
791 K>N No ClinGen
gnomAD
CA3026414
rs201233299
792 P>R No ClinGen
ExAC
TOPMed
gnomAD
CA357754436
rs1457380243
792 P>S No ClinGen
gnomAD
CA357754479
rs1175587583
795 P>L No ClinGen
gnomAD
rs776831944
CA3026418
797 F>V No ClinGen
ExAC
gnomAD
rs1329921442
CA357754500
798 T>I No ClinGen
TOPMed
gnomAD
CA3026421
rs369593381
801 D>E No ClinGen
ESP
ExAC
gnomAD
rs1347645910
CA357754565
806 G>V No ClinGen
gnomAD
CA102690036
rs149314909
812 A>T No ClinGen
ESP
gnomAD
CA102690039
rs147412381
813 E>K No ClinGen
ESP
TOPMed
CA102690041
rs147412381
813 E>Q No ClinGen
ESP
TOPMed
rs139661580
CA3026438
816 K>N No ClinGen
ESP
ExAC
TOPMed
gnomAD
RCV000998253
COSM1049575
CA357754643
rs1578837249
818 Q>* endometrium [Cosmic] No ClinGen
cosmic curated
ClinVar
Ensembl
dbSNP
rs866585951
CA102690067
818 Q>R No ClinGen
Ensembl
rs764011794
CA3026442
820 Y>C No ClinGen
ExAC
TOPMed
gnomAD
rs761606059
CA3026444
825 I>V No ClinGen
ExAC
gnomAD
rs1175212935
CA357754697
826 P>H No ClinGen
TOPMed
CA102690095
rs984318104
827 D>A No ClinGen
TOPMed
gnomAD
CA3026447
rs755773662
829 D>E No ClinGen
ExAC
TOPMed
gnomAD
rs750069260
CA3026446
829 D>N No ClinGen
ExAC
TOPMed
gnomAD
CA357754757
rs1475718562
835 L>V No ClinGen
gnomAD
COSM293768
CA3026449
rs373165003
836 A>V large_intestine [Cosmic] No ClinGen
cosmic curated
ESP
ExAC
TOPMed
gnomAD
CA357754801
rs1159282370
842 G>R No ClinGen
gnomAD
rs1427457307
CA357754808
843 I>L No ClinGen
gnomAD
rs535499088
CA3026452
843 I>T No ClinGen
1000Genomes
ExAC
gnomAD
RCV001090881
rs1297155609
845 N>S No ClinVar
dbSNP
CA357754821
rs1297155609
845 N>T No ClinGen
gnomAD
CA357754840
rs1416330231
848 F>I No ClinGen
gnomAD
CA3026454
RCV001310492
rs374536762
849 R>Q No ClinGen
ClinVar
ESP
ExAC
TOPMed
dbSNP
gnomAD
RCV000762103
CA3026453
rs747643116
849 R>W No ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
rs1236934560
CA357754854
850 L>Q No ClinGen
TOPMed
CA3026456
rs147169338
851 S>R No ClinGen
ESP
ExAC
gnomAD
rs376121386
CA3026457
852 P>S No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs547514307
CA3026458
853 A>D No ClinGen
1000Genomes
ExAC
gnomAD
rs768662565
CA3026459
856 K>E No ClinGen
ExAC
TOPMed
gnomAD
CA3026460
rs148626207
859 M>T No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs933952078
CA102690190
859 M>V No ClinGen
Ensembl
CA102690195
rs1049751488
860 D>N No ClinGen
TOPMed
rs761695940
CA3026461
861 N>S No ClinGen
ExAC
TOPMed
rs770564763
CA3026483
864 V>I No ClinGen
ExAC
gnomAD
rs776456025
CA3026484
867 G>R No ClinGen
ExAC
gnomAD
rs1553938888
RCV000497896
868 T>missing No ClinVar
dbSNP
rs372576307
CA3026485
869 V>I No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs1233638615
CA357755009
873 V>A No ClinGen
Ensembl
rs995077819
CA102690984
873 V>L No ClinGen
TOPMed
gnomAD
rs995077819
CA357755006
873 V>M No ClinGen
TOPMed
gnomAD
rs1298134899
CA357755019
875 A>T No ClinGen
TOPMed
rs1380751223
CA357755024
875 A>V No ClinGen
TOPMed
rs200451929
CA3026487
876 L>P No ClinGen
1000Genomes
ExAC
gnomAD
rs751865962
RCV001090882
CA3026488
877 R>S No ClinGen
ClinVar
ExAC
TOPMed
dbSNP
gnomAD
CA3026489
rs572469662
878 Q>E No ClinGen
1000Genomes
ExAC
gnomAD
CA3026490
rs199668563
878 Q>H No ClinGen
1000Genomes
ESP
ExAC
TOPMed
gnomAD
rs756502096
CA3026491
879 M>V No ClinGen
ExAC
TOPMed
gnomAD
rs1162608817
CA357755049
880 G>S No ClinGen
TOPMed
COSM3775450
CA357755068
rs1462393245
882 T>I urinary_tract [Cosmic] No ClinGen
cosmic curated
TOPMed
rs748249744
CA3026496
883 E>K No ClinGen
ExAC
TOPMed
gnomAD
rs867547604
CA102691050
884 A>E No ClinGen
Ensembl
CA357755110
rs1448559639
889 Q>E No ClinGen
TOPMed
rs1560723776
CA357755120
890 A>V No ClinGen
Ensembl
CA3026498
rs777771569
891 A>G No ClinGen
ExAC
gnomAD
CA357755128
rs1465085480
892 S>T No ClinGen
gnomAD
rs1165511787
CA357755131
892 S>Y No ClinGen
gnomAD
rs1194999494
CA357755140
893 S>R No ClinGen
TOPMed
CA3026501
rs558088267
900 Q>E No ClinGen
1000Genomes
ExAC
gnomAD
rs201708495
CA3026502
900 Q>H No ClinGen
1000Genomes
ExAC
TOPMed
gnomAD
VAR_016273
CA102691090
rs4648118
901 A>T No ClinGen
UniProt
Ensembl
dbSNP
rs1578839351
CA357755194
902 H>P No ClinGen
Ensembl
CA102691099
rs781620527
903 S>A No ClinGen
TOPMed
COSM176832
rs142074302
CA3026503
903 S>L large_intestine [Cosmic] No ClinGen
cosmic curated
1000Genomes
ESP
ExAC
TOPMed
gnomAD
CA357755212
rs1253465534
905 P>R No ClinGen
TOPMed
CA3026505
rs762534305
906 L>F No ClinGen
ExAC
gnomAD
rs369577304
CA3026506
907 S>L No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA3026507
rs773797721
908 P>L No ClinGen
ExAC
gnomAD
rs1484555975
CA357755229
909 A>T No ClinGen
gnomAD
CA3026508
rs372601198
909 A>V No ClinGen
ESP
ExAC
gnomAD
rs935364579
CA102691146
912 R>K No ClinGen
Ensembl
rs766773037
CA3026509
913 Q>H No ClinGen
ExAC
gnomAD
CA357755267
rs1188585068
915 I>L No ClinGen
gnomAD
rs1471766104
CA357755275
916 D>N No ClinGen
gnomAD
CA3026533
rs766860802
917 E>K No ClinGen
ExAC
TOPMed
gnomAD
CA102693445
rs766860802
917 E>Q No ClinGen
ExAC
TOPMed
gnomAD
CA357755686
rs1342558094
918 L>P No ClinGen
gnomAD
CA3026534
rs368962343
919 R>Q No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA357755705
rs1365780728
921 S>N No ClinGen
gnomAD
rs41341444
CA3026535
921 S>R No ClinGen
ExAC
TOPMed
gnomAD
CA102693468
rs913373928
928 G>S No ClinGen
TOPMed
gnomAD
rs200653734
CA3026539
934 R>C No ClinGen
ExAC
TOPMed
gnomAD
rs751585372
CA3026540
934 R>H No ClinGen
ExAC
TOPMed
gnomAD
rs751585372
CA3026541
934 R>L No ClinGen
ExAC
TOPMed
gnomAD
CA102693489
rs200653734
934 R>S No ClinGen
ExAC
TOPMed
gnomAD
CA357755795
rs1328741179
935 K>Q No ClinGen
gnomAD
rs756000027
CA3026544
COSM138446
939 T>I skin [Cosmic] No ClinGen
cosmic curated
ExAC
gnomAD
rs750315573
CA3026543
939 T>P No ClinGen
ExAC
TOPMed
CA3026546
rs373316062
940 E>K No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA357755828
rs373316062
940 E>Q No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA3026548
rs143882681
943 T>N No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA357755854
rs1319995973
944 S>N No ClinGen
gnomAD
CA357755862
rs1267058231
945 G>D No ClinGen
TOPMed
rs747675628
CA3026549
947 S>L No ClinGen
ExAC
gnomAD
CA357755887
rs1192019369
950 T>A No ClinGen
gnomAD
rs1269652332
CA357755890
950 T>S No ClinGen
gnomAD
rs777154135
CA3026551
951 L>P No ClinGen
ExAC
gnomAD
CA357755903
rs981584543
952 N>K No ClinGen
gnomAD
rs1253099050
CA357755914
954 M>V No ClinGen
TOPMed
CA3026553
rs201983448
956 H>L No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs201983448
CA102693555
956 H>R No ClinGen
ESP
ExAC
TOPMed
gnomAD
rs762362361
CA102693560
957 D>E No ClinGen
Ensembl
CA3026554
rs199909759
959 G>R No ClinGen
ExAC
TOPMed
gnomAD
rs199909759
CA357755949
959 G>R No ClinGen
ExAC
TOPMed
gnomAD
rs1398945464
CA357755958
960 Q>R No ClinGen
gnomAD
CA3026556
rs140660237
963 P>H No ClinGen
ESP
ExAC
gnomAD
CA3026555
rs146862629
963 P>S No ClinGen
ESP
ExAC
TOPMed
gnomAD
CA357755981
rs1578844809
964 L>V No ClinGen
Ensembl
CA357756003
rs1278661577
967 K>R No ClinGen
gnomAD

3 associated diseases with P19838

[MIM: 261600]: Phenylketonuria (PKU)

Autosomal recessive inborn error of phenylalanine metabolism, due to severe phenylalanine hydroxylase deficiency. It is characterized by blood concentrations of phenylalanine persistently above 1200 mumol (normal concentration 100 mumol) which usually causes intellectual disability (unless low phenylalanine diet is introduced early in life). They tend to have light pigmentation, rashes similar to eczema, epilepsy, extreme hyperactivity, psychotic states and an unpleasant 'mousy' odor. . Note=The disease is caused by variants affecting the gene represented in this entry.

[MIM: 261600]: Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA)

Mild form of phenylalanine hydroxylase deficiency characterized by phenylalanine levels persistently below 600 mumol, which allows normal intellectual and behavioral development without treatment. Non-PKU HPA is usually caused by the combined effect of a mild hyperphenylalaninemia mutation and a severe one. . Note=The disease is caused by variants affecting the gene represented in this entry.

[MIM: 261600]: Hyperphenylalaninemia (HPA)

Mildest form of phenylalanine hydroxylase deficiency. . Note=The disease is caused by variants affecting the gene represented in this entry.

Without disease ID
  • Autosomal recessive inborn error of phenylalanine metabolism, due to severe phenylalanine hydroxylase deficiency. It is characterized by blood concentrations of phenylalanine persistently above 1200 mumol (normal concentration 100 mumol) which usually causes intellectual disability (unless low phenylalanine diet is introduced early in life). They tend to have light pigmentation, rashes similar to eczema, epilepsy, extreme hyperactivity, psychotic states and an unpleasant 'mousy' odor. . Note=The disease is caused by variants affecting the gene represented in this entry.
  • Mild form of phenylalanine hydroxylase deficiency characterized by phenylalanine levels persistently below 600 mumol, which allows normal intellectual and behavioral development without treatment. Non-PKU HPA is usually caused by the combined effect of a mild hyperphenylalaninemia mutation and a severe one. . Note=The disease is caused by variants affecting the gene represented in this entry.
  • Mildest form of phenylalanine hydroxylase deficiency. . Note=The disease is caused by variants affecting the gene represented in this entry.

10 regional properties for P19838

Type Name Position InterPro Accession
domain FERM domain 5 - 295 IPR000299
domain Ezrin/radixin/moesin, C-terminal 511 - 586 IPR011259
domain FERM, N-terminal 9 - 68 IPR018979
domain FERM, C-terminal PH-like domain 210 - 299 IPR018980
conserved_site FERM conserved site 58 - 88 IPR019747-1
conserved_site FERM conserved site 176 - 205 IPR019747-2
domain FERM central domain 91 - 206 IPR019748
domain Band 4.1 domain 1 - 206 IPR019749
domain ERM family, FERM domain C-lobe 200 - 296 IPR041789
domain Ezrin/radixin/moesin, alpha-helical domain 337 - 456 IPR046810

Functions

Description
EC Number
Subcellular Localization
  • [Nuclear factor NF-kappa-B p105 subunit]: Cytoplasm
  • ;
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

11 GO annotations of cellular component

Name Definition
chromatin The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
cytosol The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
extracellular region The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
I-kappaB/NF-kappaB complex A protein complex containing an inhibitory-kappaB (I-kappaB/IKB) protein and one or more copies of an NF-kappaB protein. In the resting state, NF-kappaB dimers are bound to I-kappaB proteins, sequestering NF-kappaB in the cytoplasm.
mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
NF-kappaB complex A protein complex that consists of a homo- or heterodimer of members of a family of structurally related proteins that contain a conserved N-terminal region called the Rel homology domain (RHD). In the nucleus, NF-kappaB complexes act as transcription factors. In unstimulated cells, NF-kappaB dimers are sequestered in the cytoplasm by IkappaB monomers; signals that induce NF-kappaB activity cause degradation of IkappaB, allowing NF-kappaB dimers to translocate to the nucleus and induce gene expression.
nucleoplasm That part of the nuclear content other than the chromosomes or the nucleolus.
nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
secretory granule lumen The volume enclosed by the membrane of a secretory granule.
specific granule lumen The volume enclosed by the membrane of a specific granule, a granule with a membranous, tubular internal structure, found primarily in mature neutrophil cells. Most are released into the extracellular fluid. Specific granules contain lactoferrin, lysozyme, vitamin B12 binding protein and elastase.

12 GO annotations of molecular function

Name Definition
actinin binding Binding to actinin, any member of a family of proteins that crosslink F-actin.
chromatin binding Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
DNA-binding transcription activator activity, RNA polymerase II-specific A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets transcribed by RNA polymerase II.
DNA-binding transcription factor activity A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
DNA-binding transcription factor activity, RNA polymerase II-specific A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II.
DNA-binding transcription repressor activity, RNA polymerase II-specific A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets transcribed by RNA polymerase II.
enzyme binding Binding to an enzyme, a protein with catalytic activity.
identical protein binding Binding to an identical protein or proteins.
RNA polymerase II cis-regulatory region sequence-specific DNA binding Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II.
RNA polymerase II transcription regulatory region sequence-specific DNA binding Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
transcription cis-regulatory region binding Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
transcription coactivator binding Binding to a transcription coactivator, a protein involved in positive regulation of transcription via protein-protein interactions with transcription factors and other proteins that positively regulate transcription. Transcription coactivators do not bind DNA directly, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery.

30 GO annotations of biological process

Name Definition
apoptotic process A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
cellular response to angiotensin Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an angiotensin stimulus. Angiotensin is any of three physiologically active peptides (angiotensin II, III, or IV) processed from angiotensinogen.
cellular response to dsRNA Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.
cellular response to interleukin-1 Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus.
cellular response to interleukin-6 Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-6 stimulus.
cellular response to lipopolysaccharide Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
cellular response to mechanical stimulus Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.
cellular response to nicotine Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus.
cellular response to tumor necrosis factor Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.
cellular response to virus Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.
inflammatory response The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.
JNK cascade An intracellular protein kinase cascade containing at least a JNK (a MAPK), a JNKK (a MAPKK) and a JUN3K (a MAP3K). The cascade can also contain an additional tier: the upstream MAP4K. The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell.
negative regulation of apoptotic process Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
negative regulation of calcidiol 1-monooxygenase activity Any process that decreases the rate, frequency or extent of calcidiol 1-monooxygenase activity. Calcidiol 1-monooxygenase activity is the catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O.
negative regulation of cholesterol transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
negative regulation of gene expression Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).
negative regulation of inflammatory response Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response.
negative regulation of interleukin-12 production Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production.
negative regulation of transcription by RNA polymerase II Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
negative regulation of vitamin D biosynthetic process Any process that decreases the rate, frequency or extent of a vitamin D biosynthetic process. Vitamin D biosynthesis is the chemical reactions and pathways resulting in the formation of vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).
positive regulation of canonical Wnt signaling pathway Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.
positive regulation of hyaluronan biosynthetic process Any process that activates or increases the frequency, rate or extent of hyaluronan biosynthetic process.
positive regulation of lipid storage Any process that increases the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.
positive regulation of macrophage derived foam cell differentiation Any process that increases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.
positive regulation of miRNA metabolic process Any process that activates or increases the frequency, rate or extent of miRNA metabolic process.
positive regulation of transcription by RNA polymerase II Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
positive regulation of transcription, DNA-templated Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
regulation of transcription by RNA polymerase II Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
response to muscle stretch Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a myofibril being extended beyond its slack length.
transcription by RNA polymerase II The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).

17 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
P98150 NFKB2 Nuclear factor NF-kappa-B p100 subunit Gallus gallus (Chicken) SS
Q04861 NFKB1 Nuclear factor NF-kappa-B p105 subunit Gallus gallus (Chicken) SS
Q6F3J0 NFKB1 Nuclear factor NF-kappa-B p105 subunit Canis lupus familiaris (Dog) (Canis familiaris) SS
Q94527 Rel Nuclear factor NF-kappa-B p110 subunit Drosophila melanogaster (Fruit fly) EV
Q99549 MPHOSPH8 M-phase phosphoprotein 8 Homo sapiens (Human) PR
Q8N9B4 ANKRD42 Ankyrin repeat domain-containing protein 42 Homo sapiens (Human) PR
Q6ZVZ8 ASB18 Ankyrin repeat and SOCS box protein 18 Homo sapiens (Human) PR
Q04206 RELA Transcription factor p65 Homo sapiens (Human) EV
Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit Homo sapiens (Human) SS
Q9CZK6 Anks3 Ankyrin repeat and SAM domain-containing protein 3 Mus musculus (Mouse) PR
Q8VHA6 Asb18 Ankyrin repeat and SOCS box protein 18 Mus musculus (Mouse) PR
Q9WTK5 Nfkb2 Nuclear factor NF-kappa-B p100 subunit [Cleaved into: Nuclear factor NF-kappa-B p52 subunit] Mus musculus (Mouse) EV
P25799 Nfkb1 Nuclear factor NF-kappa-B p105 subunit [Cleaved into: Nuclear factor NF-kappa-B p50 subunit] Mus musculus (Mouse) EV
Q04207 Rela Transcription factor p65 Mus musculus (Mouse) SS
Q9TZM3 lrk-1 Leucine-rich repeat serine/threonine-protein kinase 1 Caenorhabditis elegans SS
O22265 CAO Signal recognition particle 43 kDa protein, chloroplastic Arabidopsis thaliana (Mouse-ear cress) PR
Q9SZI3 NPR2 Regulatory protein NPR2 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MAEDDPYLGR PEQMFHLDPS LTHTIFNPEV FQPQMALPTD GPYLQILEQP KQRGFRFRYV
70 80 90 100 110 120
CEGPSHGGLP GASSEKNKKS YPQVKICNYV GPAKVIVQLV TNGKNIHLHA HSLVGKHCED
130 140 150 160 170 180
GICTVTAGPK DMVVGFANLG ILHVTKKKVF ETLEARMTEA CIRGYNPGLL VHPDLAYLQA
190 200 210 220 230 240
EGGGDRQLGD REKELIRQAA LQQTKEMDLS VVRLMFTAFL PDSTGSFTRR LEPVVSDAIY
250 260 270 280 290 300
DSKAPNASNL KIVRMDRTAG CVTGGEEIYL LCDKVQKDDI QIRFYEEEEN GGVWEGFGDF
310 320 330 340 350 360
SPTDVHRQFA IVFKTPKYKD INITKPASVF VQLRRKSDLE TSEPKPFLYY PEIKDKEEVQ
370 380 390 400 410 420
RKRQKLMPNF SDSFGGGSGA GAGGGGMFGS GGGGGGTGST GPGYSFPHYG FPTYGGITFH
430 440 450 460 470 480
PGTTKSNAGM KHGTMDTESK KDPEGCDKSD DKNTVNLFGK VIETTEQDQE PSEATVGNGE
490 500 510 520 530 540
VTLTYATGTK EESAGVQDNL FLEKAMQLAK RHANALFDYA VTGDVKMLLA VQRHLTAVQD
550 560 570 580 590 600
ENGDSVLHLA IIHLHSQLVR DLLEVTSGLI SDDIINMRND LYQTPLHLAV ITKQEDVVED
610 620 630 640 650 660
LLRAGADLSL LDRLGNSVLH LAAKEGHDKV LSILLKHKKA ALLLDHPNGD GLNAIHLAMM
670 680 690 700 710 720
SNSLPCLLLL VAAGADVNAQ EQKSGRTALH LAVEHDNISL AGCLLLEGDA HVDSTTYDGT
730 740 750 760 770 780
TPLHIAAGRG STRLAALLKA AGADPLVENF EPLYDLDDSW ENAGEDEGVV PGTTPLDMAT
790 800 810 820 830 840
SWQVFDILNG KPYEPEFTSD DLLAQGDMKQ LAEDVKLQLY KLLEIPDPDK NWATLAQKLG
850 860 870 880 890 900
LGILNNAFRL SPAPSKTLMD NYEVSGGTVR ELVEALRQMG YTEAIEVIQA ASSPVKTTSQ
910 920 930 940 950 960
AHSLPLSPAS TRQQIDELRD SDSVCDSGVE TSFRKLSFTE SLTSGASLLT LNKMPHDYGQ
EGPLEGKI