P19838
Gene name |
NFKB1 |
Protein name |
Nuclear factor NF-kappa-B p105 subunit |
Names |
DNA-binding factor KBF1, EBP-1, Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:4790 |
EC number |
|
Protein Class |
|

Descriptions
Autoinhibitory domains (AIDs)
Target domain |
39-350 (Rel-homology domain) |
Relief mechanism |
Cleavage, PTM |
Assay |
|
Accessory elements
No accessory elements
References
- Vallabhapurapu S et al. (2009) "Regulation and function of NF-kappaB transcription factors in the immune system", Annual review of immunology, 27, 693-733
- Perkins ND (2007) "Integrating cell-signalling pathways with NF-kappaB and IKK function", Nature reviews. Molecular cell biology, 8, 49-62
- Dorrington MG et al. (2019) "NF-κB Signaling in Macrophages: Dynamics, Crosstalk, and Signal Integration", Frontiers in immunology, 10, 705
- Heusch M et al. (1999) "The generation of nfkb2 p52: mechanism and efficiency", Oncogene, 18, 6201-8
- Savinova OV et al. (2009) "The Nfkb1 and Nfkb2 proteins p105 and p100 function as the core of high-molecular-weight heterogeneous complexes", Molecular cell, 34, 591-602
- Hatada EN et al. (1992) "The ankyrin repeat domains of the NF-kappa B precursor p105 and the protooncogene bcl-3 act as specific inhibitors of NF-kappa B DNA binding", Proceedings of the National Academy of Sciences of the United States of America, 89, 2489-93
Autoinhibited structure

Activated structure

15 structures for P19838
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
1MDI | NMR | - | B | 55-67 | PDB |
1MDJ | NMR | - | B | 55-67 | PDB |
1MDK | NMR | - | B | 55-67 | PDB |
1NFI | X-ray | 270 A | B/D | 248-354 | PDB |
1SVC | X-ray | 260 A | P | 2-365 | PDB |
2DBF | NMR | - | A | 806-893 | PDB |
2O61 | X-ray | 280 A | B | 40-352 | PDB |
3GUT | X-ray | 359 A | B/D/F/H | 41-352 | PDB |
7LEQ | X-ray | 224 A | B | 355-368 | PDB |
7LET | X-ray | 240 A | B | 355-368 | PDB |
7LF4 | X-ray | 285 A | B/F | 355-368 | PDB |
7LFC | X-ray | 210 A | B | 355-368 | PDB |
7RG4 | X-ray | 260 A | B | 331-370 | PDB |
7RG5 | X-ray | 215 A | B | 331-370 | PDB |
AF-P19838-F1 | Predicted | AlphaFoldDB |
552 variants for P19838
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
rs1578735747 RCV001027600 |
62 | E>missing | Inherited Immunodeficiency Diseases [ClinVar] | Yes |
ClinVar dbSNP |
CA357958699 RCV001027589 rs1578771120 RCV001374707 |
86 | I>S | Immunodeficiency, common variable, 12 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV001027601 CA357958773 RCV001862409 rs1578771211 |
98 | Q>* | Inherited Immunodeficiency Diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV000761318 rs1560679469 |
105 | N>missing | Immunodeficiency, common variable, 12 [ClinVar] | Yes |
ClinVar dbSNP |
rs1724867456 RCV001327993 |
139 | L>missing | Immunodeficiency, common variable, 12 [ClinVar] | Yes |
ClinVar dbSNP |
rs869320754 RCV000195130 |
155 | A>missing | Immunodeficiency, common variable, 12 [ClinVar] | Yes |
ClinVar dbSNP |
rs1724875502 RCV001262328 |
175 | L>* | Immunodeficiency, common variable, 12 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001331150 rs778125529 CA3025944 |
223 | S>N | Immunodeficiency, common variable, 12 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
RCV001262753 CA357960455 RCV001027598 RCV001027604 rs1578793312 |
283 | R>* | Immunodeficiency, common variable, 12 Inherited Immunodeficiency Diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
RCV000788230 RCV000611708 rs773694113 RCV001027605 |
301 | S>missing | Immunodeficiency, common variable, 12 Inherited Immunodeficiency Diseases [ClinVar] | Yes |
ClinVar dbSNP |
RCV001027593 rs1578795536 |
335 | R>missing | Inherited Immunodeficiency Diseases [ClinVar] | Yes |
ClinVar dbSNP |
RCV001027595 RCV001027594 rs1578809101 |
474 | A>missing | Inherited Immunodeficiency Diseases [ClinVar] | Yes |
ClinVar dbSNP |
rs4648072 VAR_016269 CA3026192 RCV001284835 RCV000514841 |
506 | M>V | Immunodeficiency, common variable, 12 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
RCV001027596 rs1578811073 RCV001374706 |
512 | H>missing | Immunodeficiency, common variable, 12 Inherited Immunodeficiency Diseases [ClinVar] | Yes |
ClinVar dbSNP |
RCV001027599 rs1578811245 |
539 | Q>* | Inherited Immunodeficiency Diseases [ClinVar] | Yes |
ClinVar dbSNP |
CA3026263 RCV000881374 RCV001286331 rs149211506 |
614 | L>F | Immunodeficiency, common variable, 12 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
rs1727845506 RCV001331149 |
675 | A>V | Immunodeficiency, common variable, 12 [ClinVar] | Yes |
ClinVar dbSNP |
RCV001267366 CA3026381 RCV001880144 rs368017285 |
757 | D>G | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
rs1728635624 RCV001263439 |
890 | A>missing | Immunodeficiency, common variable, 12 [ClinVar] | Yes |
ClinVar dbSNP |
rs754417859 CA3025772 |
4 | D>E | No |
ClinGen ExAC gnomAD |
|
rs764715465 CA3025773 |
7 | Y>H | No |
ClinGen ExAC gnomAD |
|
CA3025775 rs752031846 |
8 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1490669735 CA357957281 |
13 | Q>E | No |
ClinGen gnomAD |
|
CA357957284 rs1200938039 |
13 | Q>R | No |
ClinGen gnomAD |
|
rs966015688 CA103123588 |
16 | H>L | No |
ClinGen TOPMed gnomAD |
|
CA357957317 rs1385709386 |
16 | H>N | No |
ClinGen gnomAD |
|
rs966015688 CA357957321 |
16 | H>R | No |
ClinGen TOPMed gnomAD |
|
rs1364913100 CA357957334 |
18 | D>A | No |
ClinGen gnomAD |
|
CA3025795 rs750825184 |
19 | P>L | No |
ClinGen ExAC gnomAD |
|
CA357957340 rs1424689902 |
19 | P>S | No |
ClinGen TOPMed |
|
CA3025796 rs370685242 |
20 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA357957363 rs1347167148 |
23 | H>D | No |
ClinGen TOPMed gnomAD |
|
CA3025797 rs780417051 |
23 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749502665 CA3025798 |
24 | T>A | No |
ClinGen ExAC gnomAD |
|
rs778867861 CA3025800 |
25 | I>V | No |
ClinGen ExAC gnomAD |
|
CA357957387 rs1454525455 |
26 | F>L | No |
ClinGen TOPMed gnomAD |
|
CA357957398 rs1485949241 |
28 | P>S | No |
ClinGen TOPMed |
|
CA103123590 rs899498254 |
30 | V>I | No |
ClinGen TOPMed gnomAD |
|
CA357957435 rs1359408485 |
33 | P>L | No |
ClinGen TOPMed gnomAD |
|
rs748222621 CA3025801 |
35 | M>I | No |
ClinGen ExAC gnomAD |
|
rs1382519896 CA357957449 |
35 | M>T | No |
ClinGen gnomAD |
|
rs1285815126 CA357957447 |
35 | M>V | No |
ClinGen TOPMed gnomAD |
|
CA3025802 rs572127952 |
39 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA357957497 rs1183827374 |
40 | D>G | No |
ClinGen gnomAD |
|
CA103123982 rs201487209 |
42 | P>A | No |
ClinGen Ensembl |
|
CA103124400 COSM167280 rs1040399901 |
56 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs1377309694 CA357957634 |
58 | R>C | No |
ClinGen gnomAD |
|
CA357957682 rs1170050395 |
65 | S>A | No |
ClinGen gnomAD |
|
RCV000788275 CA357957722 rs1578735801 |
71 | G>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA357957731 rs1304282431 |
73 | S>T | No |
ClinGen gnomAD |
|
CA357957764 rs1346783408 |
77 | N>S | No |
ClinGen gnomAD |
|
rs1300115442 CA357957787 |
80 | S>C | No |
ClinGen TOPMed gnomAD |
|
rs1326698146 CA357957799 |
82 | P>S | No |
ClinGen gnomAD |
|
rs1560679373 CA357958702 |
87 | C>R | No |
ClinGen Ensembl |
|
rs1387606271 CA357958704 |
87 | C>Y | No |
ClinGen gnomAD |
|
CA3025854 rs763286279 |
88 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3025855 rs764399130 |
89 | Y>F | No |
ClinGen ExAC gnomAD |
|
rs751657227 CA3025856 |
92 | P>S | No |
ClinGen ExAC gnomAD |
|
rs767444867 CA3025858 |
95 | V>L | No |
ClinGen ExAC gnomAD |
|
CA357958768 rs1578771197 RCV001027591 |
97 | V>D | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA3025859 rs750404195 |
97 | V>I | No |
ClinGen ExAC gnomAD |
|
CA357958799 RCV000998246 rs1578771216 |
102 | N>D | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1578771232 CA357958829 |
106 | I>V | No |
ClinGen Ensembl |
|
CA3025862 rs749065614 RCV001327030 |
107 | H>Y | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs968064966 CA103127456 |
117 | H>Q | No |
ClinGen Ensembl |
|
CA357958910 rs1241312324 |
118 | C>R | No |
ClinGen gnomAD |
|
rs747658024 CA3025865 |
120 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs754689167 CA3025864 |
120 | D>N | No |
ClinGen ExAC gnomAD |
|
CA3025863 rs754689167 |
120 | D>Y | No |
ClinGen ExAC gnomAD |
|
rs1482484326 CA357958952 |
124 | T>A | No |
ClinGen gnomAD |
|
rs770371252 CA3025869 |
128 | G>E | No |
ClinGen ExAC gnomAD |
|
rs776055694 CA3025870 |
131 | D>A | No |
ClinGen ExAC gnomAD |
|
rs1309700083 CA357958996 |
131 | D>N | No |
ClinGen TOPMed gnomAD |
|
rs761899477 CA3025874 |
135 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3025873 rs199574943 |
135 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs761899477 CA357959023 COSM222928 |
135 | G>D | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs199574943 RCV000998247 CA3025872 |
135 | G>S | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA357959047 rs1460343437 |
137 | A>T | No |
ClinGen TOPMed gnomAD |
|
CA357959076 RCV000788831 rs1578785141 |
141 | I>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA3025888 rs749720974 |
142 | L>F | No |
ClinGen ExAC |
|
rs1481035824 CA357959098 |
145 | T>S | No |
ClinGen gnomAD |
|
rs1285473658 CA357959177 |
156 | R>Q | No |
ClinGen gnomAD |
|
rs1233818072 CA357959203 |
160 | A>T | No |
ClinGen TOPMed |
|
CA357959208 rs1354534120 |
160 | A>V | No |
ClinGen TOPMed |
|
rs772170990 CA3025892 |
162 | I>M | No |
ClinGen ExAC gnomAD |
|
CA3025891 rs762107099 |
162 | I>T | No |
ClinGen ExAC gnomAD |
|
CA103128506 rs989172843 |
163 | R>K | No |
ClinGen Ensembl |
|
CA3025893 rs376562815 |
164 | G>S | No |
ClinGen ESP ExAC gnomAD |
|
rs1335157467 CA357959238 |
165 | Y>C | No |
ClinGen TOPMed |
|
RCV000788311 rs1578785260 |
166 | N>missing | No |
ClinVar dbSNP |
|
CA357959249 rs1313338016 |
167 | P>S | No |
ClinGen TOPMed |
|
rs945312107 CA103128507 |
169 | L>F | No |
ClinGen TOPMed |
|
rs1490382917 CA357959274 |
171 | V>L | No |
ClinGen gnomAD |
|
CA3025896 rs753794335 |
172 | H>D | No |
ClinGen ExAC |
|
rs1244646904 CA357959308 |
176 | A>S | No |
ClinGen gnomAD |
|
rs765087404 CA3025898 |
177 | Y>C | No |
ClinGen ExAC gnomAD |
|
RCV000785730 CA357959314 rs1425802039 |
177 | Y>N | No |
ClinGen ClinVar dbSNP gnomAD |
|
rs370312017 CA3025900 |
183 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs751158419 CA3025902 |
185 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs777291215 CA3025901 |
185 | D>Y | No |
ClinGen ExAC gnomAD |
|
rs201874528 CA3025903 |
186 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1304978961 CA357959375 |
187 | Q>K | No |
ClinGen gnomAD |
|
rs1407374916 CA357959472 |
191 | R>Q | No |
ClinGen gnomAD |
|
CA103128708 rs865962183 COSM1485563 |
191 | R>W | breast [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA103128709 rs924808846 |
192 | E>A | No |
ClinGen TOPMed |
|
CA357959489 rs1416497348 |
193 | K>N | No |
ClinGen TOPMed gnomAD |
|
CA16618021 RCV000478377 rs1064797068 |
195 | L>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000998248 rs1578787945 |
196 | I>missing | No |
ClinVar dbSNP |
|
rs370846760 CA103128710 |
197 | R>C | No |
ClinGen ESP gnomAD |
|
CA3025935 rs561236472 RCV000896881 |
197 | R>H | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs561236472 CA357959512 |
197 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1289614962 CA357959524 |
199 | A>E | No |
ClinGen gnomAD |
|
COSM1049555 CA3025936 rs774227974 |
201 | L>M | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs112424808 CA103128711 |
202 | Q>L | No |
ClinGen Ensembl |
|
rs1007366668 CA103128712 |
204 | T>A | No |
ClinGen Ensembl |
|
CA103128713 rs751252206 |
207 | M>V | No |
ClinGen Ensembl |
|
CA357959603 rs1325477490 |
211 | V>M | No |
ClinGen TOPMed gnomAD |
|
rs1277862289 CA357959616 |
213 | R>W | No |
ClinGen gnomAD |
|
rs200893106 CA3025941 |
215 | M>I | No |
ClinGen ExAC gnomAD |
|
CA357959675 rs1471643896 |
221 | P>L | No |
ClinGen gnomAD |
|
rs747362564 CA3025945 |
224 | T>I | No |
ClinGen ExAC gnomAD |
|
rs781361488 CA3025947 |
227 | F>L | No |
ClinGen ExAC gnomAD |
|
rs968767176 CA103128715 |
229 | R>S | No |
ClinGen TOPMed |
|
CA3025948 rs558348827 |
230 | R>C | No |
ClinGen ExAC gnomAD |
|
rs146936581 RCV001531399 RCV000520669 CA3025949 |
230 | R>H | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs146936581 CA3025950 |
230 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1553934187 RCV000521084 |
234 | V>missing | No |
ClinVar dbSNP |
|
rs768698948 CA357959752 |
234 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3025952 rs768698948 |
234 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1578788175 CA357959760 |
235 | V>G | No |
ClinGen Ensembl |
|
CA103128716 rs993488882 |
235 | V>I | No |
ClinGen TOPMed |
|
CA103128717 rs200186183 |
238 | A>T | No |
ClinGen TOPMed gnomAD |
|
rs1164768587 CA357959918 |
244 | A>T | No |
ClinGen gnomAD |
|
RCV000998249 CA357959928 rs1578790471 |
244 | A>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1369756216 CA357959949 |
246 | N>S | No |
ClinGen TOPMed gnomAD |
|
CA3025994 rs777489019 |
253 | V>L | No |
ClinGen ExAC gnomAD |
|
CA357960064 rs1578790536 |
260 | G>A | No |
ClinGen Ensembl |
|
rs1057518392 RCV000414558 CA16042543 |
264 | G>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA357960132 rs1560692699 |
270 | L>P | No |
ClinGen Ensembl |
|
CA103128864 rs1017383520 |
274 | K>R | No |
ClinGen TOPMed gnomAD |
|
rs1453366376 CA357960176 |
276 | Q>H | No |
ClinGen gnomAD |
|
RCV000788600 rs1578790573 RCV001027602 |
277 | K>missing | No |
ClinVar dbSNP |
|
CA357960427 RCV001027592 rs1578793298 |
280 | I>M | No |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001296192 rs1725424009 |
283 | R>P | No |
ClinVar dbSNP |
|
CA357960483 rs1560694362 RCV000762101 |
285 | Y>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA357960515 rs1328954485 |
287 | E>A | No |
ClinGen gnomAD |
|
rs1362178758 CA357960520 |
287 | E>D | No |
ClinGen TOPMed |
|
rs1057518403 CA16042474 RCV000413927 |
287 | E>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs1211213470 CA357960545 |
289 | E>G | No |
ClinGen TOPMed gnomAD |
|
CA357960552 rs1578793375 |
290 | N>H | No |
ClinGen Ensembl |
|
rs1244496072 CA357960579 COSM3380769 |
292 | G>R | pancreas [Cosmic] | No |
ClinGen cosmic curated TOPMed |
CA103129078 rs781210011 |
297 | F>Y | No |
ClinGen Ensembl |
|
CA357960653 RCV000523641 rs1553934600 |
298 | G>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
CA357960670 rs1560694437 |
299 | D>G | No |
ClinGen Ensembl |
|
rs934369353 CA103129079 |
300 | F>I | No |
ClinGen TOPMed |
|
rs1028039837 CA103129258 |
311 | I>V | No |
ClinGen gnomAD |
|
CA357960803 rs1419437025 |
314 | K>Q | No |
ClinGen TOPMed |
|
CA3026030 rs759894336 |
321 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM1538934 CA3026029 rs777076983 |
321 | I>V | lung liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA3026032 rs752866944 |
324 | T>K | No |
ClinGen ExAC gnomAD |
|
rs765552855 CA3026031 |
324 | T>P | No |
ClinGen ExAC |
|
CA3026033 rs201065307 |
325 | K>N | No |
ClinGen ExAC gnomAD |
|
rs1237040358 CA357960888 |
326 | P>S | No |
ClinGen TOPMed |
|
rs1725580228 RCV001239655 |
327 | A>missing | No |
ClinVar dbSNP |
|
CA357960897 rs1437539113 |
327 | A>V | No |
ClinGen gnomAD |
|
rs143817570 CA3026037 COSM78167 |
334 | R>Q | ovary large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
CA357960977 rs755801598 |
339 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357960980 rs1226296416 |
340 | E>* | No |
ClinGen TOPMed |
|
CA103129261 rs977929741 |
346 | P>S | No |
ClinGen gnomAD |
|
rs1578805410 RCV001008506 |
357 | E>missing | No |
ClinVar dbSNP |
|
rs747606607 CA3026064 |
361 | R>K | No |
ClinGen ExAC gnomAD |
|
CA357750324 rs1473182732 |
363 | R>H | No |
ClinGen gnomAD |
|
CA3026065 rs771511171 |
366 | L>F | No |
ClinGen ExAC gnomAD |
|
CA3026066 rs371719137 COSM170770 |
371 | S>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
rs1321434628 CA357750411 |
375 | G>D | No |
ClinGen TOPMed gnomAD |
|
CA3026069 rs150233754 |
375 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA102680485 rs1024890793 COSM200211 |
376 | G>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
CA3026072 rs774560110 |
377 | G>D | No |
ClinGen ExAC gnomAD |
|
rs1228688860 CA357750424 |
378 | S>G | No |
ClinGen gnomAD |
|
CA3026073 rs761774576 |
378 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1228688860 CA357750423 |
378 | S>R | No |
ClinGen gnomAD |
|
rs1578805527 CA357750434 |
379 | G>A | No |
ClinGen Ensembl |
|
rs767533475 CA3026074 |
379 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3026075 rs750386857 |
380 | A>V | No |
ClinGen ExAC gnomAD |
|
CA3026078 rs753561118 |
381 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs758005910 CA3026082 |
384 | G>D | No |
ClinGen ExAC gnomAD |
|
rs376020000 CA3026081 |
384 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs756958327 CA3026084 |
385 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1471828685 CA357750470 |
386 | G>V | No |
ClinGen gnomAD |
|
CA3026085 rs770371198 |
387 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs919393668 CA102680562 |
387 | M>T | No |
ClinGen Ensembl |
|
rs1426491900 CA357750473 |
387 | M>V | No |
ClinGen gnomAD |
|
rs1374371369 CA357750494 |
390 | S>G | No |
ClinGen gnomAD |
|
CA3026086 rs780529668 |
392 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1275150873 CA357750527 |
395 | G>A | No |
ClinGen gnomAD |
|
rs201183726 CA102680596 |
395 | G>R | No |
ClinGen Ensembl |
|
rs1361486298 CA357750532 |
396 | G>D | No |
ClinGen Ensembl |
|
rs535214258 CA357750539 |
397 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs535214258 CA3026091 |
397 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA3026092 rs772141760 COSM368177 |
398 | G>E | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA357750547 rs1205899256 |
399 | S>G | No |
ClinGen gnomAD |
|
rs1473283013 CA357750548 |
399 | S>N | No |
ClinGen gnomAD |
|
rs1560703895 CA357750554 |
400 | T>A | No |
ClinGen Ensembl |
|
rs1560703916 CA357750562 |
401 | G>A | No |
ClinGen Ensembl |
|
rs773215129 CA3026093 |
401 | G>S | No |
ClinGen ExAC gnomAD |
|
CA357750587 rs1197135991 |
403 | G>V | No |
ClinGen gnomAD |
|
rs573164232 CA3026108 |
404 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA357750600 rs1444450766 |
405 | S>I | No |
ClinGen gnomAD |
|
rs1200842985 CA357750605 |
406 | F>V | No |
ClinGen TOPMed |
|
CA357750620 rs1387837873 |
408 | H>L | No |
ClinGen gnomAD |
|
CA357750630 rs1461019247 |
409 | Y>F | No |
ClinGen gnomAD |
|
CA357750649 rs1163517867 |
412 | P>S | No |
ClinGen gnomAD |
|
CA357750655 rs1350194292 |
413 | T>A | No |
ClinGen gnomAD |
|
CA357750658 rs1392377047 |
413 | T>I | No |
ClinGen gnomAD |
|
CA357750662 rs1403407081 |
414 | Y>C | No |
ClinGen gnomAD |
|
rs369442929 CA3026110 |
415 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA357750690 rs1458854781 |
418 | T>S | No |
ClinGen TOPMed |
|
CA357750705 rs1226729977 |
420 | H>Q | No |
ClinGen gnomAD |
|
rs747060104 CA3026112 |
420 | H>R | No |
ClinGen ExAC gnomAD |
|
rs1222242764 CA357750707 |
421 | P>A | No |
ClinGen gnomAD |
|
rs1222242764 CA357750706 |
421 | P>T | No |
ClinGen gnomAD |
|
CA3026113 rs770903327 |
422 | G>E | No |
ClinGen ExAC gnomAD |
|
CA357750718 rs776457144 |
423 | T>A | No |
ClinGen ExAC gnomAD |
|
rs1212212163 CA357750720 |
423 | T>S | No |
ClinGen gnomAD |
|
rs776457144 CA3026114 |
423 | T>S | No |
ClinGen ExAC gnomAD |
|
CA357750763 rs1191100232 |
430 | M>V | No |
ClinGen gnomAD |
|
CA357750787 rs1246690791 |
433 | G>R | No |
ClinGen gnomAD |
|
CA3026126 rs56280473 |
434 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA102681833 rs56280473 |
434 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3026128 rs748505860 |
435 | M>I | No |
ClinGen ExAC gnomAD |
|
CA357750813 rs779199620 |
435 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs779199620 RCV000788710 CA3026127 |
435 | M>T | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
COSM1538933 CA357750823 rs758656960 |
436 | D>E | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs777949092 CA3026130 |
437 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3026131 rs747186194 |
437 | T>N | No |
ClinGen ExAC gnomAD |
|
CA357750824 rs777949092 |
437 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
rs951538664 CA102681852 |
439 | S>P | No |
ClinGen TOPMed |
|
rs770946957 CA3026132 |
440 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs776709082 CA3026133 |
440 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs183929764 CA102681857 |
442 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA3026134 rs183929764 |
442 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs149548281 CA102681864 |
445 | G>D | No |
ClinGen ESP TOPMed |
|
CA102681869 rs756234799 |
446 | C>G | No |
ClinGen Ensembl |
|
rs202196813 CA3026136 |
447 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs202196813 CA357750888 |
447 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357750900 rs1304497007 |
448 | K>N | No |
ClinGen gnomAD |
|
rs1466545002 CA357750897 |
448 | K>R | No |
ClinGen gnomAD |
|
CA357750908 rs1404499106 |
449 | S>R | No |
ClinGen gnomAD |
|
CA357750912 rs1560706282 |
450 | D>G | No |
ClinGen Ensembl |
|
CA102681876 rs758007973 |
450 | D>Y | No |
ClinGen Ensembl |
|
rs1560706306 RCV000762102 |
453 | N>missing | No |
ClinVar dbSNP |
|
CA3026139 rs774174368 |
454 | T>P | No |
ClinGen ExAC gnomAD |
|
rs761486898 CA3026140 |
457 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs766947944 CA3026141 |
460 | K>* | No |
ClinGen ExAC gnomAD |
|
rs749931994 CA3026142 |
461 | V>L | No |
ClinGen ExAC gnomAD |
|
rs144132174 CA3026143 |
462 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA357751022 rs753109613 |
466 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs753109613 CA3026145 |
466 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs765742100 CA3026144 |
466 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV000998252 rs1578809017 |
467 | Q>missing | No |
ClinVar dbSNP |
|
rs939459600 RCV000788218 CA357751024 |
467 | Q>* | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs939459600 CA102681935 |
467 | Q>E | No |
ClinGen TOPMed gnomAD |
|
CA3026146 rs113440082 |
468 | D>G | No |
ClinGen ExAC gnomAD |
|
rs1249624682 CA357751042 |
469 | Q>R | No |
ClinGen gnomAD |
|
rs1178180588 CA357751064 |
472 | S>I | No |
ClinGen gnomAD |
|
CA3026148 rs751784926 |
472 | S>R | No |
ClinGen ExAC gnomAD |
|
rs1337707554 CA357751066 |
473 | E>K | No |
ClinGen TOPMed |
|
CA3026149 rs201777128 |
474 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1029260090 CA102681943 |
474 | A>S | No |
ClinGen Ensembl |
|
CA3026150 rs368857298 |
475 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA3026153 RCV000969194 rs56147914 |
476 | V>F | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA3026152 rs56147914 |
476 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs370612125 CA102681963 |
479 | G>V | No |
ClinGen Ensembl |
|
rs1387665261 CA357751128 |
483 | L>R | No |
ClinGen gnomAD |
|
CA357751134 rs768572248 |
484 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3026155 rs768572248 |
484 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3026157 rs761427508 |
487 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs4648065 CA3026158 VAR_016268 RCV000972725 |
489 | T>I | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1343662720 CA357751166 |
490 | K>Q | No |
ClinGen gnomAD |
|
CA3026160 rs760208617 |
492 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3026159 rs772636272 |
492 | E>G | No |
ClinGen ExAC gnomAD |
|
CA357751182 rs1202062110 |
492 | E>K | No |
ClinGen gnomAD |
|
rs376402199 CA3026161 |
493 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA3026162 rs753234250 |
494 | A>S | No |
ClinGen ExAC gnomAD |
|
rs370018067 CA3026163 |
494 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs764457992 CA3026164 |
495 | G>R | No |
ClinGen ExAC gnomAD |
|
rs1390923466 CA357751203 |
495 | G>V | No |
ClinGen gnomAD |
|
CA357751204 rs1411703511 |
496 | V>I | No |
ClinGen gnomAD |
|
rs751909408 CA3026165 |
497 | Q>H | No |
ClinGen ExAC gnomAD |
|
rs532849982 CA102682031 |
498 | D>N | No |
ClinGen TOPMed |
|
CA3026189 rs201395077 |
499 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA102682668 rs757317367 |
500 | L>I | No |
ClinGen Ensembl |
|
rs1333934885 CA357751249 |
501 | F>L | No |
ClinGen gnomAD |
|
rs753960003 CA3026191 |
502 | L>V | No |
ClinGen ExAC gnomAD |
|
rs370232532 CA102682678 |
504 | K>Q | No |
ClinGen ESP TOPMed |
|
rs1445140594 CA357751289 |
507 | Q>E | No |
ClinGen gnomAD |
|
CA357751301 rs1241657198 |
508 | L>P | No |
ClinGen TOPMed gnomAD |
|
CA357751321 rs548137186 |
511 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357751331 rs1408261872 |
513 | A>T | No |
ClinGen gnomAD |
|
rs777364800 CA3026195 |
514 | N>S | No |
ClinGen ExAC gnomAD |
|
rs1160281218 CA357751366 |
518 | D>A | No |
ClinGen TOPMed gnomAD |
|
rs770559726 CA3026197 RCV001245710 |
518 | D>N | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA102682706 rs912960525 |
519 | Y>F | No |
ClinGen TOPMed |
|
CA3026199 rs767590342 |
520 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs769204159 CA3026200 |
520 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357751384 rs1416049980 |
521 | V>L | No |
ClinGen gnomAD |
|
rs762191642 CA3026202 |
522 | T>I | No |
ClinGen ExAC gnomAD |
|
CA357751407 rs1320374807 |
525 | V>M | No |
ClinGen gnomAD |
|
rs894361895 CA102682749 |
527 | M>I | No |
ClinGen Ensembl |
|
rs1223196343 CA357751423 |
527 | M>L | No |
ClinGen gnomAD |
|
COSM144954 CA3026206 rs139575566 |
531 | V>I | central_nervous_system breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
rs150281816 CA3026208 RCV000954092 |
533 | R>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs749431614 CA102682782 |
535 | L>V | No |
ClinGen Ensembl |
|
CA102682784 rs888119577 |
536 | T>A | No |
ClinGen Ensembl |
|
rs765191169 CA3026209 |
538 | V>A | No |
ClinGen ExAC gnomAD |
|
rs1183147873 CA357751488 |
538 | V>L | No |
ClinGen TOPMed gnomAD |
|
rs1305790811 CA357751495 |
539 | Q>L | No |
ClinGen Ensembl |
|
CA357751512 rs1468899754 |
541 | E>G | No |
ClinGen gnomAD |
|
rs1158531427 CA357751518 |
542 | N>H | No |
ClinGen gnomAD |
|
CA357751524 rs1426432122 |
543 | G>R | No |
ClinGen gnomAD |
|
RCV000910263 rs147574894 CA3026226 |
551 | I>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA357751624 rs1243895642 |
555 | H>R | No |
ClinGen TOPMed |
|
CA357751643 rs1459962593 |
558 | L>F | No |
ClinGen TOPMed |
|
CA3026228 rs776670245 |
565 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
RCV000895758 CA3026230 VAR_016270 rs4648085 |
566 | T>I | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1352596520 CA357751696 |
567 | S>T | No |
ClinGen TOPMed |
|
CA357751704 rs1370387176 |
568 | G>C | No |
ClinGen TOPMed gnomAD |
|
CA357751703 rs1370387176 |
568 | G>R | No |
ClinGen TOPMed gnomAD |
|
rs200626732 CA3026231 |
569 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA357751751 rs1560711026 |
575 | I>V | No |
ClinGen Ensembl |
|
CA357751765 rs1238976982 |
577 | M>L | No |
ClinGen TOPMed |
|
rs780928731 CA3026234 |
577 | M>T | No |
ClinGen ExAC gnomAD |
|
CA3026235 rs4648086 VAR_016271 |
578 | R>K | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1212406721 CA357751789 |
580 | D>Y | No |
ClinGen gnomAD |
|
rs779678187 CA3026237 |
582 | Y>H | No |
ClinGen ExAC gnomAD |
|
rs748712723 CA3026238 |
583 | Q>K | No |
ClinGen ExAC gnomAD |
|
COSM219325 CA102686323 rs748549995 |
584 | T>M | breast [Cosmic] | No |
ClinGen cosmic curated Ensembl |
rs1261412487 CA357751851 |
587 | H>L | No |
ClinGen gnomAD |
|
CA357751846 rs1259119314 |
587 | H>Y | No |
ClinGen TOPMed gnomAD |
|
CA3026253 rs767318470 |
590 | V>A | No |
ClinGen ExAC gnomAD |
|
CA357751873 rs1187853840 |
591 | I>V | No |
ClinGen gnomAD |
|
CA3026255 rs755827011 |
596 | D>E | No |
ClinGen ExAC |
|
rs750210825 CA3026254 |
596 | D>N | No |
ClinGen ExAC gnomAD |
|
rs1412434365 CA357751924 |
598 | V>A | No |
ClinGen gnomAD |
|
CA102686335 rs898072521 |
598 | V>M | No |
ClinGen TOPMed gnomAD |
|
CA3026257 rs55661548 |
599 | E>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs535706427 CA3026256 |
599 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs11556612 CA102686350 |
607 | D>H | No |
ClinGen ExAC gnomAD |
|
rs11556612 CA3026260 |
607 | D>N | No |
ClinGen ExAC gnomAD |
|
COSM107259 CA102686356 rs144066812 |
610 | L>F | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA102686359 rs1036891634 |
612 | D>G | No |
ClinGen TOPMed |
|
COSM1049569 rs374903458 CA3026261 |
613 | R>C | large_intestine endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC gnomAD |
COSM2951878 CA3026262 rs773613546 |
613 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs770105175 CA3026264 |
615 | G>S | No |
ClinGen ExAC gnomAD |
|
CA3026265 rs775599472 |
616 | N>Y | No |
ClinGen ExAC gnomAD |
|
rs749489735 CA3026266 |
619 | L>M | No |
ClinGen ExAC gnomAD |
|
rs201559647 CA357752061 |
621 | L>I | No |
ClinGen TOPMed gnomAD |
|
rs201559647 CA102686383 |
621 | L>V | No |
ClinGen TOPMed gnomAD |
|
CA3026268 rs774361550 |
622 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1252330766 CA357752072 |
623 | A>T | No |
ClinGen gnomAD |
|
rs767408358 CA3026270 |
624 | K>R | No |
ClinGen ExAC gnomAD |
|
CA357752084 rs1156870619 |
625 | E>Q | No |
ClinGen gnomAD |
|
CA3026271 rs558097730 |
627 | H>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs766156098 CA3026273 |
632 | S>G | No |
ClinGen ExAC gnomAD |
|
rs1433149808 CA357752134 |
632 | S>N | No |
ClinGen gnomAD |
|
rs569559369 CA102686431 |
633 | I>T | No |
ClinGen gnomAD |
|
CA357752140 rs1312469339 |
633 | I>V | No |
ClinGen gnomAD |
|
CA357752154 rs1393451792 |
635 | L>F | No |
ClinGen TOPMed gnomAD |
|
rs1393451792 CA357752153 |
635 | L>V | No |
ClinGen TOPMed gnomAD |
|
CA357752163 rs1335623065 |
636 | K>R | No |
ClinGen gnomAD |
|
CA357752167 rs1235666404 |
637 | H>D | No |
ClinGen TOPMed gnomAD |
|
CA357752168 rs1235666404 |
637 | H>Y | No |
ClinGen TOPMed gnomAD |
|
CA3026276 rs764897996 |
638 | K>Q | No |
ClinGen ExAC gnomAD |
|
rs1251484219 CA357752191 |
640 | A>T | No |
ClinGen gnomAD |
|
rs891064864 CA102686452 |
641 | A>T | No |
ClinGen Ensembl |
|
CA357752223 rs1481504006 |
645 | D>E | No |
ClinGen gnomAD |
|
CA357752233 rs781759362 |
647 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3026279 rs781759362 |
647 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1175205869 CA357752242 |
648 | N>S | No |
ClinGen TOPMed gnomAD |
|
rs375088091 CA3026280 |
649 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs756468288 CA3026281 |
650 | D>H | No |
ClinGen ExAC gnomAD |
|
CA357752274 rs1185315958 |
651 | G>A | No |
ClinGen TOPMed |
|
rs1560716462 CA357752259 |
651 | G>S | No |
ClinGen Ensembl |
|
rs776357090 CA3026309 |
654 | A>G | No |
ClinGen ExAC gnomAD |
|
rs113549494 CA102686849 |
654 | A>T | No |
ClinGen Ensembl |
|
rs1460756330 CA357752295 |
655 | I>L | No |
ClinGen TOPMed |
|
CA102686858 rs969568429 |
658 | A>V | No |
ClinGen Ensembl |
|
rs1210261634 CA357752332 |
660 | M>R | No |
ClinGen TOPMed |
|
rs1468032850 CA357752339 |
661 | S>N | No |
ClinGen gnomAD |
|
rs1242830185 CA357752347 |
662 | N>S | No |
ClinGen gnomAD |
|
rs769653890 CA3026311 |
663 | S>G | No |
ClinGen ExAC gnomAD |
|
rs1354029165 CA357752362 |
664 | L>P | No |
ClinGen Ensembl |
|
CA102686882 rs948787905 |
667 | L>V | No |
ClinGen TOPMed |
|
CA357752401 rs1475745534 |
671 | V>M | No |
ClinGen gnomAD |
|
CA102686887 rs1016498801 |
672 | A>G | No |
ClinGen Ensembl |
|
rs751054953 CA3026315 |
673 | A>T | No |
ClinGen ExAC gnomAD |
|
CA357752428 rs1380630328 |
676 | D>N | No |
ClinGen TOPMed |
|
CA3026317 rs766900573 |
677 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1578828182 CA357752494 |
685 | G>E | No |
ClinGen Ensembl |
|
rs934744465 CA102686929 |
685 | G>R | No |
ClinGen TOPMed |
|
rs1355627768 CA357752498 |
686 | R>C | No |
ClinGen TOPMed gnomAD |
|
rs148097278 CA102686951 |
686 | R>H | No |
ClinGen ESP TOPMed gnomAD |
|
CA3026320 rs779211179 |
691 | L>V | No |
ClinGen ExAC gnomAD |
|
rs1553937650 RCV000520481 CA357752545 |
694 | E>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
rs757232492 CA3026323 |
696 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1285582042 CA357752570 |
697 | N>S | No |
ClinGen gnomAD |
|
rs111293796 COSM3365437 CA102686985 |
701 | A>T | kidney [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA3026326 rs781202431 |
701 | A>V | No |
ClinGen ExAC gnomAD |
|
rs141844350 CA3026327 |
703 | C>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA357752654 rs1236513600 |
709 | D>N | No |
ClinGen gnomAD |
|
VAR_016272 RCV000969195 CA3026353 rs4648099 |
711 | H>Q | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA357752671 rs1215372705 |
711 | H>Y | No |
ClinGen gnomAD |
|
CA357752676 rs1436404980 |
712 | V>M | No |
ClinGen gnomAD |
|
rs376030164 CA102687223 |
714 | S>R | No |
ClinGen ESP TOPMed |
|
CA357752719 rs1198609105 |
716 | T>A | No |
ClinGen gnomAD |
|
rs760077365 CA3026354 |
718 | D>N | No |
ClinGen ExAC gnomAD |
|
rs765730757 CA3026355 |
729 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357752919 rs1372537183 |
732 | T>A | No |
ClinGen TOPMed |
|
rs370433110 CA3026357 |
733 | R>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1403630346 CA357752944 |
734 | L>M | No |
ClinGen TOPMed |
|
rs889739551 CA102687245 |
735 | A>T | No |
ClinGen TOPMed |
|
rs1357733153 CA357753615 |
748 | E>G | No |
ClinGen gnomAD |
|
rs750585384 CA3026380 |
754 | Y>C | No |
ClinGen ExAC gnomAD |
|
rs1206315302 CA357753673 |
756 | L>M | No |
ClinGen gnomAD |
|
CA3026383 rs764230559 |
760 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA102688805 rs754058922 |
762 | N>S | No |
ClinGen gnomAD |
|
CA357753791 rs1560720653 |
763 | A>E | No |
ClinGen Ensembl |
|
CA3026384 rs754851506 |
764 | G>E | No |
ClinGen ExAC gnomAD |
|
CA102688825 rs964387720 |
766 | D>H | No |
ClinGen TOPMed |
|
rs778809251 CA3026385 |
768 | G>R | No |
ClinGen ExAC gnomAD |
|
rs1364255980 CA357753867 |
769 | V>D | No |
ClinGen gnomAD |
|
CA357754038 rs1299091738 |
778 | M>I | No |
ClinGen TOPMed |
|
CA102688836 rs369716580 |
778 | M>T | No |
ClinGen ESP |
|
rs1578834273 CA357754047 |
779 | A>S | No |
ClinGen Ensembl |
|
rs758127477 CA3026387 |
779 | A>V | No |
ClinGen ExAC gnomAD |
|
rs1218498420 CA357754134 |
783 | Q>P | No |
ClinGen TOPMed |
|
CA357754398 rs1236465875 |
789 | N>S | No |
ClinGen TOPMed |
|
CA3026413 rs748652265 |
790 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1227116065 CA357754430 |
791 | K>N | No |
ClinGen gnomAD |
|
CA3026414 rs201233299 |
792 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357754436 rs1457380243 |
792 | P>S | No |
ClinGen gnomAD |
|
CA357754479 rs1175587583 |
795 | P>L | No |
ClinGen gnomAD |
|
rs776831944 CA3026418 |
797 | F>V | No |
ClinGen ExAC gnomAD |
|
rs1329921442 CA357754500 |
798 | T>I | No |
ClinGen TOPMed gnomAD |
|
CA3026421 rs369593381 |
801 | D>E | No |
ClinGen ESP ExAC gnomAD |
|
rs1347645910 CA357754565 |
806 | G>V | No |
ClinGen gnomAD |
|
CA102690036 rs149314909 |
812 | A>T | No |
ClinGen ESP gnomAD |
|
CA102690039 rs147412381 |
813 | E>K | No |
ClinGen ESP TOPMed |
|
CA102690041 rs147412381 |
813 | E>Q | No |
ClinGen ESP TOPMed |
|
rs139661580 CA3026438 |
816 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
RCV000998253 COSM1049575 CA357754643 rs1578837249 |
818 | Q>* | endometrium [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
rs866585951 CA102690067 |
818 | Q>R | No |
ClinGen Ensembl |
|
rs764011794 CA3026442 |
820 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs761606059 CA3026444 |
825 | I>V | No |
ClinGen ExAC gnomAD |
|
rs1175212935 CA357754697 |
826 | P>H | No |
ClinGen TOPMed |
|
CA102690095 rs984318104 |
827 | D>A | No |
ClinGen TOPMed gnomAD |
|
CA3026447 rs755773662 |
829 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
rs750069260 CA3026446 |
829 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357754757 rs1475718562 |
835 | L>V | No |
ClinGen gnomAD |
|
COSM293768 CA3026449 rs373165003 |
836 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
CA357754801 rs1159282370 |
842 | G>R | No |
ClinGen gnomAD |
|
rs1427457307 CA357754808 |
843 | I>L | No |
ClinGen gnomAD |
|
rs535499088 CA3026452 |
843 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
RCV001090881 rs1297155609 |
845 | N>S | No |
ClinVar dbSNP |
|
CA357754821 rs1297155609 |
845 | N>T | No |
ClinGen gnomAD |
|
CA357754840 rs1416330231 |
848 | F>I | No |
ClinGen gnomAD |
|
CA3026454 RCV001310492 rs374536762 |
849 | R>Q | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000762103 CA3026453 rs747643116 |
849 | R>W | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1236934560 CA357754854 |
850 | L>Q | No |
ClinGen TOPMed |
|
CA3026456 rs147169338 |
851 | S>R | No |
ClinGen ESP ExAC gnomAD |
|
rs376121386 CA3026457 |
852 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs547514307 CA3026458 |
853 | A>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs768662565 CA3026459 |
856 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA3026460 rs148626207 |
859 | M>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs933952078 CA102690190 |
859 | M>V | No |
ClinGen Ensembl |
|
CA102690195 rs1049751488 |
860 | D>N | No |
ClinGen TOPMed |
|
rs761695940 CA3026461 |
861 | N>S | No |
ClinGen ExAC TOPMed |
|
rs770564763 CA3026483 |
864 | V>I | No |
ClinGen ExAC gnomAD |
|
rs776456025 CA3026484 |
867 | G>R | No |
ClinGen ExAC gnomAD |
|
rs1553938888 RCV000497896 |
868 | T>missing | No |
ClinVar dbSNP |
|
rs372576307 CA3026485 |
869 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1233638615 CA357755009 |
873 | V>A | No |
ClinGen Ensembl |
|
rs995077819 CA102690984 |
873 | V>L | No |
ClinGen TOPMed gnomAD |
|
rs995077819 CA357755006 |
873 | V>M | No |
ClinGen TOPMed gnomAD |
|
rs1298134899 CA357755019 |
875 | A>T | No |
ClinGen TOPMed |
|
rs1380751223 CA357755024 |
875 | A>V | No |
ClinGen TOPMed |
|
rs200451929 CA3026487 |
876 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs751865962 RCV001090882 CA3026488 |
877 | R>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA3026489 rs572469662 |
878 | Q>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA3026490 rs199668563 |
878 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs756502096 CA3026491 |
879 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1162608817 CA357755049 |
880 | G>S | No |
ClinGen TOPMed |
|
COSM3775450 CA357755068 rs1462393245 |
882 | T>I | urinary_tract [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs748249744 CA3026496 |
883 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs867547604 CA102691050 |
884 | A>E | No |
ClinGen Ensembl |
|
CA357755110 rs1448559639 |
889 | Q>E | No |
ClinGen TOPMed |
|
rs1560723776 CA357755120 |
890 | A>V | No |
ClinGen Ensembl |
|
CA3026498 rs777771569 |
891 | A>G | No |
ClinGen ExAC gnomAD |
|
CA357755128 rs1465085480 |
892 | S>T | No |
ClinGen gnomAD |
|
rs1165511787 CA357755131 |
892 | S>Y | No |
ClinGen gnomAD |
|
rs1194999494 CA357755140 |
893 | S>R | No |
ClinGen TOPMed |
|
CA3026501 rs558088267 |
900 | Q>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs201708495 CA3026502 |
900 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
VAR_016273 CA102691090 rs4648118 |
901 | A>T | No |
ClinGen UniProt Ensembl dbSNP |
|
rs1578839351 CA357755194 |
902 | H>P | No |
ClinGen Ensembl |
|
CA102691099 rs781620527 |
903 | S>A | No |
ClinGen TOPMed |
|
COSM176832 rs142074302 CA3026503 |
903 | S>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
CA357755212 rs1253465534 |
905 | P>R | No |
ClinGen TOPMed |
|
CA3026505 rs762534305 |
906 | L>F | No |
ClinGen ExAC gnomAD |
|
rs369577304 CA3026506 |
907 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA3026507 rs773797721 |
908 | P>L | No |
ClinGen ExAC gnomAD |
|
rs1484555975 CA357755229 |
909 | A>T | No |
ClinGen gnomAD |
|
CA3026508 rs372601198 |
909 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
rs935364579 CA102691146 |
912 | R>K | No |
ClinGen Ensembl |
|
rs766773037 CA3026509 |
913 | Q>H | No |
ClinGen ExAC gnomAD |
|
CA357755267 rs1188585068 |
915 | I>L | No |
ClinGen gnomAD |
|
rs1471766104 CA357755275 |
916 | D>N | No |
ClinGen gnomAD |
|
CA3026533 rs766860802 |
917 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA102693445 rs766860802 |
917 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357755686 rs1342558094 |
918 | L>P | No |
ClinGen gnomAD |
|
CA3026534 rs368962343 |
919 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA357755705 rs1365780728 |
921 | S>N | No |
ClinGen gnomAD |
|
rs41341444 CA3026535 |
921 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA102693468 rs913373928 |
928 | G>S | No |
ClinGen TOPMed gnomAD |
|
rs200653734 CA3026539 |
934 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs751585372 CA3026540 |
934 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs751585372 CA3026541 |
934 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA102693489 rs200653734 |
934 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA357755795 rs1328741179 |
935 | K>Q | No |
ClinGen gnomAD |
|
rs756000027 CA3026544 COSM138446 |
939 | T>I | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
rs750315573 CA3026543 |
939 | T>P | No |
ClinGen ExAC TOPMed |
|
CA3026546 rs373316062 |
940 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA357755828 rs373316062 |
940 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA3026548 rs143882681 |
943 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA357755854 rs1319995973 |
944 | S>N | No |
ClinGen gnomAD |
|
CA357755862 rs1267058231 |
945 | G>D | No |
ClinGen TOPMed |
|
rs747675628 CA3026549 |
947 | S>L | No |
ClinGen ExAC gnomAD |
|
CA357755887 rs1192019369 |
950 | T>A | No |
ClinGen gnomAD |
|
rs1269652332 CA357755890 |
950 | T>S | No |
ClinGen gnomAD |
|
rs777154135 CA3026551 |
951 | L>P | No |
ClinGen ExAC gnomAD |
|
CA357755903 rs981584543 |
952 | N>K | No |
ClinGen gnomAD |
|
rs1253099050 CA357755914 |
954 | M>V | No |
ClinGen TOPMed |
|
CA3026553 rs201983448 |
956 | H>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs201983448 CA102693555 |
956 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs762362361 CA102693560 |
957 | D>E | No |
ClinGen Ensembl |
|
CA3026554 rs199909759 |
959 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs199909759 CA357755949 |
959 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1398945464 CA357755958 |
960 | Q>R | No |
ClinGen gnomAD |
|
CA3026556 rs140660237 |
963 | P>H | No |
ClinGen ESP ExAC gnomAD |
|
CA3026555 rs146862629 |
963 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA357755981 rs1578844809 |
964 | L>V | No |
ClinGen Ensembl |
|
CA357756003 rs1278661577 |
967 | K>R | No |
ClinGen gnomAD |
3 associated diseases with P19838
[MIM: 261600]: Phenylketonuria (PKU)
Autosomal recessive inborn error of phenylalanine metabolism, due to severe phenylalanine hydroxylase deficiency. It is characterized by blood concentrations of phenylalanine persistently above 1200 mumol (normal concentration 100 mumol) which usually causes intellectual disability (unless low phenylalanine diet is introduced early in life). They tend to have light pigmentation, rashes similar to eczema, epilepsy, extreme hyperactivity, psychotic states and an unpleasant 'mousy' odor. . Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 261600]: Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA)
Mild form of phenylalanine hydroxylase deficiency characterized by phenylalanine levels persistently below 600 mumol, which allows normal intellectual and behavioral development without treatment. Non-PKU HPA is usually caused by the combined effect of a mild hyperphenylalaninemia mutation and a severe one. . Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 261600]: Hyperphenylalaninemia (HPA)
Mildest form of phenylalanine hydroxylase deficiency. . Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- Autosomal recessive inborn error of phenylalanine metabolism, due to severe phenylalanine hydroxylase deficiency. It is characterized by blood concentrations of phenylalanine persistently above 1200 mumol (normal concentration 100 mumol) which usually causes intellectual disability (unless low phenylalanine diet is introduced early in life). They tend to have light pigmentation, rashes similar to eczema, epilepsy, extreme hyperactivity, psychotic states and an unpleasant 'mousy' odor. . Note=The disease is caused by variants affecting the gene represented in this entry.
- Mild form of phenylalanine hydroxylase deficiency characterized by phenylalanine levels persistently below 600 mumol, which allows normal intellectual and behavioral development without treatment. Non-PKU HPA is usually caused by the combined effect of a mild hyperphenylalaninemia mutation and a severe one. . Note=The disease is caused by variants affecting the gene represented in this entry.
- Mildest form of phenylalanine hydroxylase deficiency. . Note=The disease is caused by variants affecting the gene represented in this entry.
10 regional properties for P19838
Type | Name | Position | InterPro Accession |
---|---|---|---|
domain | FERM domain | 5 - 295 | IPR000299 |
domain | Ezrin/radixin/moesin, C-terminal | 511 - 586 | IPR011259 |
domain | FERM, N-terminal | 9 - 68 | IPR018979 |
domain | FERM, C-terminal PH-like domain | 210 - 299 | IPR018980 |
conserved_site | FERM conserved site | 58 - 88 | IPR019747-1 |
conserved_site | FERM conserved site | 176 - 205 | IPR019747-2 |
domain | FERM central domain | 91 - 206 | IPR019748 |
domain | Band 4.1 domain | 1 - 206 | IPR019749 |
domain | ERM family, FERM domain C-lobe | 200 - 296 | IPR041789 |
domain | Ezrin/radixin/moesin, alpha-helical domain | 337 - 456 | IPR046810 |
11 GO annotations of cellular component
Name | Definition |
---|---|
chromatin | The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome. |
cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
extracellular region | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
I-kappaB/NF-kappaB complex | A protein complex containing an inhibitory-kappaB (I-kappaB/IKB) protein and one or more copies of an NF-kappaB protein. In the resting state, NF-kappaB dimers are bound to I-kappaB proteins, sequestering NF-kappaB in the cytoplasm. |
mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
NF-kappaB complex | A protein complex that consists of a homo- or heterodimer of members of a family of structurally related proteins that contain a conserved N-terminal region called the Rel homology domain (RHD). In the nucleus, NF-kappaB complexes act as transcription factors. In unstimulated cells, NF-kappaB dimers are sequestered in the cytoplasm by IkappaB monomers; signals that induce NF-kappaB activity cause degradation of IkappaB, allowing NF-kappaB dimers to translocate to the nucleus and induce gene expression. |
nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
secretory granule lumen | The volume enclosed by the membrane of a secretory granule. |
specific granule lumen | The volume enclosed by the membrane of a specific granule, a granule with a membranous, tubular internal structure, found primarily in mature neutrophil cells. Most are released into the extracellular fluid. Specific granules contain lactoferrin, lysozyme, vitamin B12 binding protein and elastase. |
12 GO annotations of molecular function
Name | Definition |
---|---|
actinin binding | Binding to actinin, any member of a family of proteins that crosslink F-actin. |
chromatin binding | Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
DNA-binding transcription activator activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets transcribed by RNA polymerase II. |
DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
DNA-binding transcription factor activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II. |
DNA-binding transcription repressor activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets transcribed by RNA polymerase II. |
enzyme binding | Binding to an enzyme, a protein with catalytic activity. |
identical protein binding | Binding to an identical protein or proteins. |
RNA polymerase II cis-regulatory region sequence-specific DNA binding | Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II. |
RNA polymerase II transcription regulatory region sequence-specific DNA binding | Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II. |
transcription cis-regulatory region binding | Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon. |
transcription coactivator binding | Binding to a transcription coactivator, a protein involved in positive regulation of transcription via protein-protein interactions with transcription factors and other proteins that positively regulate transcription. Transcription coactivators do not bind DNA directly, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery. |
30 GO annotations of biological process
Name | Definition |
---|---|
apoptotic process | A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. |
cellular response to angiotensin | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an angiotensin stimulus. Angiotensin is any of three physiologically active peptides (angiotensin II, III, or IV) processed from angiotensinogen. |
cellular response to dsRNA | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus. |
cellular response to interleukin-1 | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus. |
cellular response to interleukin-6 | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-6 stimulus. |
cellular response to lipopolysaccharide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria. |
cellular response to mechanical stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus. |
cellular response to nicotine | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus. |
cellular response to tumor necrosis factor | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus. |
cellular response to virus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus. |
inflammatory response | The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. |
JNK cascade | An intracellular protein kinase cascade containing at least a JNK (a MAPK), a JNKK (a MAPKK) and a JUN3K (a MAP3K). The cascade can also contain an additional tier: the upstream MAP4K. The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell. |
negative regulation of apoptotic process | Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process. |
negative regulation of calcidiol 1-monooxygenase activity | Any process that decreases the rate, frequency or extent of calcidiol 1-monooxygenase activity. Calcidiol 1-monooxygenase activity is the catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O. |
negative regulation of cholesterol transport | Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
negative regulation of gene expression | Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). |
negative regulation of inflammatory response | Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response. |
negative regulation of interleukin-12 production | Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production. |
negative regulation of transcription by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. |
negative regulation of vitamin D biosynthetic process | Any process that decreases the rate, frequency or extent of a vitamin D biosynthetic process. Vitamin D biosynthesis is the chemical reactions and pathways resulting in the formation of vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3). |
positive regulation of canonical Wnt signaling pathway | Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. |
positive regulation of hyaluronan biosynthetic process | Any process that activates or increases the frequency, rate or extent of hyaluronan biosynthetic process. |
positive regulation of lipid storage | Any process that increases the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development. |
positive regulation of macrophage derived foam cell differentiation | Any process that increases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions. |
positive regulation of miRNA metabolic process | Any process that activates or increases the frequency, rate or extent of miRNA metabolic process. |
positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. |
positive regulation of transcription, DNA-templated | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
response to muscle stretch | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a myofibril being extended beyond its slack length. |
transcription by RNA polymerase II | The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs). |
17 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
P98150 | NFKB2 | Nuclear factor NF-kappa-B p100 subunit | Gallus gallus (Chicken) | SS |
Q04861 | NFKB1 | Nuclear factor NF-kappa-B p105 subunit | Gallus gallus (Chicken) | SS |
Q6F3J0 | NFKB1 | Nuclear factor NF-kappa-B p105 subunit | Canis lupus familiaris (Dog) (Canis familiaris) | SS |
Q94527 | Rel | Nuclear factor NF-kappa-B p110 subunit | Drosophila melanogaster (Fruit fly) | EV |
Q99549 | MPHOSPH8 | M-phase phosphoprotein 8 | Homo sapiens (Human) | PR |
Q8N9B4 | ANKRD42 | Ankyrin repeat domain-containing protein 42 | Homo sapiens (Human) | PR |
Q6ZVZ8 | ASB18 | Ankyrin repeat and SOCS box protein 18 | Homo sapiens (Human) | PR |
Q04206 | RELA | Transcription factor p65 | Homo sapiens (Human) | EV |
Q00653 | NFKB2 | Nuclear factor NF-kappa-B p100 subunit | Homo sapiens (Human) | SS |
Q9CZK6 | Anks3 | Ankyrin repeat and SAM domain-containing protein 3 | Mus musculus (Mouse) | PR |
Q8VHA6 | Asb18 | Ankyrin repeat and SOCS box protein 18 | Mus musculus (Mouse) | PR |
Q9WTK5 | Nfkb2 | Nuclear factor NF-kappa-B p100 subunit [Cleaved into: Nuclear factor NF-kappa-B p52 subunit] | Mus musculus (Mouse) | EV |
P25799 | Nfkb1 | Nuclear factor NF-kappa-B p105 subunit [Cleaved into: Nuclear factor NF-kappa-B p50 subunit] | Mus musculus (Mouse) | EV |
Q04207 | Rela | Transcription factor p65 | Mus musculus (Mouse) | SS |
Q9TZM3 | lrk-1 | Leucine-rich repeat serine/threonine-protein kinase 1 | Caenorhabditis elegans | SS |
O22265 | CAO | Signal recognition particle 43 kDa protein, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
Q9SZI3 | NPR2 | Regulatory protein NPR2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
10 | 20 | 30 | 40 | 50 | 60 |
MAEDDPYLGR | PEQMFHLDPS | LTHTIFNPEV | FQPQMALPTD | GPYLQILEQP | KQRGFRFRYV |
70 | 80 | 90 | 100 | 110 | 120 |
CEGPSHGGLP | GASSEKNKKS | YPQVKICNYV | GPAKVIVQLV | TNGKNIHLHA | HSLVGKHCED |
130 | 140 | 150 | 160 | 170 | 180 |
GICTVTAGPK | DMVVGFANLG | ILHVTKKKVF | ETLEARMTEA | CIRGYNPGLL | VHPDLAYLQA |
190 | 200 | 210 | 220 | 230 | 240 |
EGGGDRQLGD | REKELIRQAA | LQQTKEMDLS | VVRLMFTAFL | PDSTGSFTRR | LEPVVSDAIY |
250 | 260 | 270 | 280 | 290 | 300 |
DSKAPNASNL | KIVRMDRTAG | CVTGGEEIYL | LCDKVQKDDI | QIRFYEEEEN | GGVWEGFGDF |
310 | 320 | 330 | 340 | 350 | 360 |
SPTDVHRQFA | IVFKTPKYKD | INITKPASVF | VQLRRKSDLE | TSEPKPFLYY | PEIKDKEEVQ |
370 | 380 | 390 | 400 | 410 | 420 |
RKRQKLMPNF | SDSFGGGSGA | GAGGGGMFGS | GGGGGGTGST | GPGYSFPHYG | FPTYGGITFH |
430 | 440 | 450 | 460 | 470 | 480 |
PGTTKSNAGM | KHGTMDTESK | KDPEGCDKSD | DKNTVNLFGK | VIETTEQDQE | PSEATVGNGE |
490 | 500 | 510 | 520 | 530 | 540 |
VTLTYATGTK | EESAGVQDNL | FLEKAMQLAK | RHANALFDYA | VTGDVKMLLA | VQRHLTAVQD |
550 | 560 | 570 | 580 | 590 | 600 |
ENGDSVLHLA | IIHLHSQLVR | DLLEVTSGLI | SDDIINMRND | LYQTPLHLAV | ITKQEDVVED |
610 | 620 | 630 | 640 | 650 | 660 |
LLRAGADLSL | LDRLGNSVLH | LAAKEGHDKV | LSILLKHKKA | ALLLDHPNGD | GLNAIHLAMM |
670 | 680 | 690 | 700 | 710 | 720 |
SNSLPCLLLL | VAAGADVNAQ | EQKSGRTALH | LAVEHDNISL | AGCLLLEGDA | HVDSTTYDGT |
730 | 740 | 750 | 760 | 770 | 780 |
TPLHIAAGRG | STRLAALLKA | AGADPLVENF | EPLYDLDDSW | ENAGEDEGVV | PGTTPLDMAT |
790 | 800 | 810 | 820 | 830 | 840 |
SWQVFDILNG | KPYEPEFTSD | DLLAQGDMKQ | LAEDVKLQLY | KLLEIPDPDK | NWATLAQKLG |
850 | 860 | 870 | 880 | 890 | 900 |
LGILNNAFRL | SPAPSKTLMD | NYEVSGGTVR | ELVEALRQMG | YTEAIEVIQA | ASSPVKTTSQ |
910 | 920 | 930 | 940 | 950 | 960 |
AHSLPLSPAS | TRQQIDELRD | SDSVCDSGVE | TSFRKLSFTE | SLTSGASLLT | LNKMPHDYGQ |
EGPLEGKI |