O95398
Gene name |
RAPGEF3 (CGEF1, EPAC, EPAC1) |
Protein name |
Rap guanine nucleotide exchange factor 3 |
Names |
Exchange factor directly activated by cAMP 1, Exchange protein directly activated by cAMP 1, EPAC 1, Rap1 guanine-nucleotide-exchange factor directly activated by cAMP, cAMP-regulated guanine nucleotide exchange factor I, cAMP-GEFI |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:10411 |
EC number |
|
Protein Class |
GUANINE NUCLEOTIDE EXCHANGE FACTOR (PTHR23113) |

Descriptions
Epac1 (RAPGEF3) is a guanine nucleotide exchange factor (GEF) for the small G protein Rap and is directly activated by cyclic AMP (cAMP). Epac1 contains a regulatory region with a cAMP-binding domain (CBD), a Dishev-elled, Egl-10, Pleckstrin (DEP) domain, and a catalytic region for GEF activity. Upon cAMP binding, Epac1 undergoes a conformational change that allows the interaction of its GEF domain with Rap, resulting in Rap activation and subsequent downstream effects, including integrin-mediated cell adhesion and cell-cell junction formation. cAMP also induces the translocation of Epac1 toward the plasma membrane (PM), which is requisite for cAMP-induced Rap activation at the PM and enhances Rap-mediated cell adhesion. In the autoinhibited state, the catalytic site is sterically covered by the N-terminal regulatory region, which occludes the Rap binding site. The autoinhibition is released by a conformational change induced by the binding of cAMP.
Autoinhibitory domains (AIDs)
Target domain |
658-923 (GEF catalytic domain) |
Relief mechanism |
Ligand binding |
Assay |
Structural analysis |
Accessory elements
No accessory elements
References
- Selvaratnam R et al. (2012) "The auto-inhibitory role of the EPAC hinge helix as mapped by NMR", PloS one, 7, e48707
- Ponsioen B et al. (2009) "Direct spatial control of Epac1 by cyclic AMP", Molecular and cellular biology, 29, 2521-31
- Gloerich M et al. (2010) "Spatial regulation of cyclic AMP-Epac1 signaling in cell adhesion by ERM proteins", Molecular and cellular biology, 30, 5421-31
Autoinhibited structure

Activated structure

2 structures for O95398
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
6H7E | X-ray | 230 A | A/B | 92-360 | PDB |
AF-O95398-F1 | Predicted | AlphaFoldDB |
899 variants for O95398
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
rs867481153 CA236477319 |
4 | G>V | No |
ClinGen Ensembl |
|
rs930543766 CA236477314 |
5 | W>* | No |
ClinGen TOPMed gnomAD |
|
rs546437260 CA6532306 |
5 | W>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA6532305 rs747203004 |
6 | P>A | No |
ClinGen ExAC gnomAD |
|
CA236477306 rs921869430 |
8 | E>D | No |
ClinGen TOPMed |
|
CA384521678 rs1452846279 |
9 | S>G | No |
ClinGen TOPMed |
|
CA384521674 rs1164501949 |
9 | S>N | No |
ClinGen gnomAD |
|
rs1462241075 CA384521652 |
12 | Q>* | No |
ClinGen gnomAD |
|
CA6532303 rs758629830 |
13 | V>G | No |
ClinGen ExAC gnomAD |
|
rs778037600 CA6532304 |
13 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384521638 rs753109148 |
14 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6532302 rs753109148 |
14 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
VAR_047924 rs11168230 CA6532300 |
16 | A>P | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA384521632 rs11168230 |
16 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA384521631 rs11168230 |
16 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA384521627 rs755530927 |
17 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs755530927 CA6532299 |
17 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384521611 rs1263521293 |
19 | D>A | No |
ClinGen gnomAD |
|
CA384521608 CA384521607 rs201883256 |
19 | D>E | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
rs528361073 CA384521600 CA236477294 |
20 | S>R | No |
ClinGen gnomAD |
|
CA6532298 rs754346610 |
22 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6532297 rs765951915 |
23 | L>P | No |
ClinGen ExAC gnomAD |
|
rs373219854 CA236477293 |
24 | G>A | No |
ClinGen ESP TOPMed gnomAD |
|
rs772984385 CA384521572 |
26 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA236477281 rs988971356 |
26 | P>L | No |
ClinGen TOPMed gnomAD |
|
rs772984385 CA6532295 |
26 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs199576694 CA6532294 |
27 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs376741096 CA236477267 |
27 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs376741096 CA384521569 |
27 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs376741096 CA6532292 |
27 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs199576694 CA6532293 |
27 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs865912467 CA236477263 |
28 | V>L | No |
ClinGen gnomAD |
|
CA384521567 rs865912467 |
28 | V>M | No |
ClinGen gnomAD |
|
rs1159183675 CA384521563 |
29 | G>R | No |
ClinGen gnomAD |
|
CA384521558 rs1188098362 |
29 | G>V | No |
ClinGen gnomAD |
|
rs372882833 CA6532290 |
30 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1420280054 CA384521556 |
30 | A>T | No |
ClinGen gnomAD |
|
rs1468785445 CA384521550 |
31 | L>F | No |
ClinGen gnomAD |
|
CA384521543 rs1254611836 |
32 | P>H | No |
ClinGen gnomAD |
|
CA384521535 rs1261465179 |
33 | D>E | No |
ClinGen TOPMed gnomAD |
|
CA236477247 rs770647967 |
33 | D>G | No |
ClinGen Ensembl |
|
rs200995306 CA6532288 |
33 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA384521533 rs746823313 |
34 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs746823313 CA6532287 |
34 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1301223002 CA384521528 |
35 | V>M | No |
ClinGen gnomAD |
|
rs777678433 CA236477244 |
36 | P>L | No |
ClinGen TOPMed gnomAD |
|
rs1432530882 CA384521515 |
37 | E>G | No |
ClinGen gnomAD |
|
CA384521510 rs1289040772 |
38 | G>R | No |
ClinGen gnomAD |
|
CA384521508 rs1289040772 |
38 | G>W | No |
ClinGen gnomAD |
|
CA6532284 rs574937207 |
39 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA384521485 rs1318068700 |
42 | N>S | No |
ClinGen TOPMed gnomAD |
|
rs867860155 CA236477238 |
43 | M>I | No |
ClinGen Ensembl |
|
rs1473811743 CA384521480 |
43 | M>L | No |
ClinGen TOPMed |
|
rs1165812024 CA384521475 |
43 | M>T | No |
ClinGen TOPMed |
|
CA6532282 rs779314712 |
44 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6532281 rs755334594 |
48 | M>I | No |
ClinGen ExAC gnomAD |
|
rs1186451799 CA384521438 |
49 | H>N | No |
ClinGen gnomAD |
|
rs1592586667 CA384521435 |
49 | H>P | No |
ClinGen Ensembl |
|
rs555142030 CA6532279 |
50 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs555142030 CA384521428 |
50 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA384521429 rs555142030 |
50 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA6532280 rs145368111 |
50 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1396861951 CA384521422 |
51 | P>L | No |
ClinGen TOPMed |
|
CA6532278 rs755629694 |
52 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384521419 rs1565771782 |
52 | R>Q | No |
ClinGen Ensembl |
|
rs749960218 CA6532277 |
55 | S>F | No |
ClinGen ExAC gnomAD |
|
rs1326752370 CA384521380 |
58 | L>M | No |
ClinGen TOPMed |
|
CA6532276 rs767040334 |
59 | L>P | No |
ClinGen ExAC gnomAD |
|
rs866086581 CA236477218 |
61 | E>* | No |
ClinGen Ensembl |
|
TCGA novel | 61 | E>D | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384521359 rs1327353172 |
62 | H>N | No |
ClinGen gnomAD |
|
CA236477213 rs1033265398 |
63 | Q>R | No |
ClinGen Ensembl |
|
CA384521342 rs1383540057 |
64 | R>C | No |
ClinGen TOPMed gnomAD |
|
CA6532272 rs762724728 |
64 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384521340 rs762724728 |
64 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6532271 rs544361057 |
65 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs375586018 CA6532269 |
67 | C>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA384521313 rs1166587370 |
68 | I>M | No |
ClinGen TOPMed gnomAD |
|
CA384521306 rs1474978068 |
69 | Q>H | No |
ClinGen gnomAD |
|
rs1376767279 CA384521312 |
69 | Q>K | No |
ClinGen gnomAD |
|
rs1373398641 CA384521303 |
70 | G>R | No |
ClinGen gnomAD |
|
CA236477199 rs372548735 |
70 | G>V | No |
ClinGen ESP TOPMed gnomAD |
|
rs772093269 CA6532267 |
72 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1486658693 CA384521283 |
73 | W>* | No |
ClinGen gnomAD |
|
TCGA novel | 75 | P>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA236474302 rs910547004 |
76 | L>H | No |
ClinGen TOPMed gnomAD |
|
CA6532256 rs140644990 |
80 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6532255 rs140644990 |
80 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6532254 rs752517164 |
81 | E>* | No |
ClinGen ExAC gnomAD |
|
CA6532253 rs765107108 |
82 | S>F | No |
ClinGen ExAC gnomAD |
|
rs765107108 CA384521211 |
82 | S>Y | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 84 | D>N | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA6532251 rs776585358 |
87 | E>K | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA6532249 rs761856409 |
88 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs761856409 CA6532250 |
88 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
rs774574166 CA6532248 |
90 | E>G | No |
ClinGen ExAC gnomAD |
|
rs886380570 CA384521162 |
90 | E>K | No |
ClinGen TOPMed gnomAD |
|
rs886380570 CA236474241 |
90 | E>Q | No |
ClinGen TOPMed gnomAD |
|
rs1009318522 CA236474150 |
94 | T>A | No |
ClinGen Ensembl |
|
CA384521122 rs374863478 |
94 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6532239 rs374863478 |
94 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6532237 rs139532773 |
96 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6532238 rs145033855 |
96 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
COSM3416886 COSM3416884 COSM3416885 |
98 | L>F | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
COSM2068668 COSM2068670 COSM2068669 |
99 | R>G | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA384521083 rs1463778681 |
101 | G>E | No |
ClinGen TOPMed gnomAD |
|
CA6532234 rs536012749 |
101 | G>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA384521080 rs1240021253 |
102 | R>G | No |
ClinGen gnomAD |
|
rs766239518 CA6532233 |
103 | Q>* | No |
ClinGen ExAC gnomAD |
|
rs371294769 CA236474118 |
105 | H>R | No |
ClinGen ESP TOPMed |
|
CA6532231 rs774328415 |
106 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA6532232 rs761884543 |
106 | R>W | No |
ClinGen ExAC gnomAD |
|
CA384521027 rs1592568127 |
111 | T>P | No |
ClinGen Ensembl |
|
CA384521017 rs1236252519 |
112 | C>S | No |
ClinGen gnomAD |
|
TCGA novel | 113 | P>L | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
rs1446586393 CA384520997 |
115 | L>F | No |
ClinGen TOPMed |
|
CA6532227 rs376712555 |
117 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs376712555 CA6532226 |
117 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs746296925 CA6532225 |
117 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA6532221 rs777121861 |
119 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6532222 rs746475678 |
119 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384520961 rs1592568008 |
121 | Y>S | No |
ClinGen Ensembl |
|
CA384520954 rs1592567989 |
122 | H>P | No |
ClinGen Ensembl |
|
CA384520943 rs1217313161 |
124 | R>G | No |
ClinGen TOPMed |
|
CA6532218 rs778595182 |
127 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs754504086 CA236474077 |
127 | R>W | No |
ClinGen gnomAD |
|
rs754654607 CA6532199 |
128 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs967746021 CA384520888 |
130 | C>F | No |
ClinGen gnomAD |
|
rs967746021 CA236473970 |
130 | C>Y | No |
ClinGen gnomAD |
|
rs779692997 CA6532197 |
131 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1157565224 CA384520880 |
132 | G>S | No |
ClinGen TOPMed |
|
RCV000897665 rs147802510 CA6532195 |
133 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA6532196 rs755978488 |
133 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs915903188 CA236473952 |
134 | E>K | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 135 | L>M | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA6532194 rs767625628 |
137 | D>Y | No |
ClinGen ExAC gnomAD |
|
CA384520846 rs1249757130 |
138 | G>R | No |
ClinGen TOPMed gnomAD |
|
CA384520837 rs1250879516 |
139 | I>T | No |
ClinGen gnomAD |
|
rs375533819 CA6532192 |
139 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA384520814 rs1213379088 |
143 | G>* | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 143 | G>E | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 143 | G>R | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
rs369316532 CA6532190 |
145 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6532189 rs199787084 |
147 | H>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs376748202 CA6532186 |
149 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs761155102 CA6532187 |
149 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs772572242 CA6532184 |
150 | S>N | No |
ClinGen ExAC gnomAD |
|
rs538589003 CA6532181 |
152 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA6532183 rs144344396 |
152 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6532182 rs144344396 |
152 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs148663057 CA6532180 |
155 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA236473917 rs770157525 |
156 | C>Y | No |
ClinGen Ensembl |
|
CA6532179 rs779823332 |
158 | V>G | No |
ClinGen ExAC gnomAD |
|
rs1159800950 CA384520704 |
161 | D>E | No |
ClinGen gnomAD |
|
COSM6136918 COSM6136920 COSM6136919 |
161 | D>Y | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA6532178 rs371733238 |
163 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6532177 rs745692594 |
164 | A>T | No |
ClinGen ExAC gnomAD |
|
CA236473911 rs950528143 |
165 | L>F | No |
ClinGen TOPMed |
|
CA6532176 rs781211783 |
167 | H>Y | No |
ClinGen ExAC gnomAD |
|
rs1485613459 CA384520664 |
168 | V>L | No |
ClinGen gnomAD |
|
CA6532159 rs769495171 |
169 | K>N | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 169 | K>T | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384520636 rs1461243168 |
170 | H>R | No |
ClinGen gnomAD |
|
rs1170658262 CA384520633 |
171 | D>N | No |
ClinGen TOPMed |
|
rs1173044196 CA384520622 |
172 | W>* | No |
ClinGen gnomAD |
|
rs1474288093 CA384520618 |
172 | W>C | No |
ClinGen gnomAD |
|
CA6532157 rs144079130 |
173 | A>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
TCGA novel | 173 | A>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384520603 rs1189340741 |
175 | Q>* | No |
ClinGen gnomAD |
|
rs1444628483 CA384520595 |
176 | D>N | No |
ClinGen gnomAD |
|
rs770886555 CA6532156 |
177 | R>* | No |
ClinGen ExAC gnomAD |
|
CA384520585 rs746936761 |
177 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6532155 rs746936761 |
177 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs777820634 CA384520578 |
178 | D>E | No |
ClinGen ExAC gnomAD |
|
CA236473806 rs369655935 |
179 | A>S | No |
ClinGen ESP TOPMed gnomAD |
|
rs1332106646 CA384520573 |
179 | A>V | No |
ClinGen gnomAD |
|
CA384520569 rs1292129395 |
180 | Q>* | No |
ClinGen TOPMed gnomAD |
|
CA236473788 rs985892977 |
182 | Y>C | No |
ClinGen gnomAD |
|
rs547271430 CA236473776 |
183 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA6532153 rs547271430 |
183 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA236473785 rs866703192 |
183 | R>W | No |
ClinGen TOPMed gnomAD |
|
rs1390636937 CA384520507 |
184 | F>V | No |
ClinGen gnomAD |
|
rs1318392407 CA384520490 |
185 | P>A | No |
ClinGen TOPMed |
|
CA384520467 rs1460057536 |
186 | G>E | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA6532150 CA6532151 rs149525116 |
186 | G>R | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs149525116 CA384520472 |
186 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1473791871 CA384520452 |
187 | P>L | No |
ClinGen gnomAD |
|
CA236473775 rs908583124 |
187 | P>S | No |
ClinGen TOPMed gnomAD |
|
CA6532148 rs767838278 |
188 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1240401480 CA384520425 |
189 | P>A | No |
ClinGen gnomAD |
|
TCGA novel | 189 | P>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
rs368855605 CA6532145 |
190 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA384520399 rs1272080612 |
190 | E>G | No |
ClinGen gnomAD |
|
CA6532144 rs368855605 |
190 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA384520384 rs1228416722 |
191 | P>S | No |
ClinGen gnomAD |
|
CA384520389 rs1228416722 |
191 | P>T | No |
ClinGen gnomAD |
|
rs544361332 CA236473748 |
192 | V>M | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
CA384520354 rs2016123 |
193 | R>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs2016123 VAR_047925 CA6532142 |
193 | R>G | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1422026611 CA384520347 |
193 | R>K | No |
ClinGen TOPMed |
|
CA6532141 rs564801246 |
194 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA384520312 rs374892191 |
195 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1407197612 CA384520306 |
196 | E>V | No |
ClinGen gnomAD |
|
rs1173225687 CA384520295 |
197 | M>I | No |
ClinGen TOPMed |
|
TCGA novel | 198 | E>G | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384520292 rs371881952 |
198 | E>K | No |
ClinGen ESP TOPMed gnomAD |
|
CA236473740 rs371881952 |
198 | E>Q | No |
ClinGen ESP TOPMed gnomAD |
|
CA384520285 rs1470796387 |
199 | E>* | No |
ClinGen gnomAD |
|
CA384520282 rs1382634896 |
199 | E>A | No |
ClinGen gnomAD |
|
CA384520277 rs1192162477 |
200 | E>K | No |
ClinGen gnomAD |
|
rs1252021429 CA384520257 |
202 | A>V | No |
ClinGen gnomAD |
|
rs1452881835 CA384520252 |
203 | E>G | No |
ClinGen gnomAD |
|
COSM5841031 COSM5841029 COSM5841030 |
203 | E>K | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA6532138 rs770831517 |
205 | V>E | No |
ClinGen ExAC gnomAD |
|
CA384520242 rs1338825622 |
205 | V>M | No |
ClinGen Ensembl |
|
rs772956322 CA6532136 |
206 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs772956322 CA6532137 |
206 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs772956322 CA384520234 |
206 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6532135 rs772077715 |
210 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1304513492 CA384520206 |
211 | R>L | No |
ClinGen TOPMed gnomAD |
|
CA384520208 rs1304513492 |
211 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA6532133 rs780159448 |
211 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6532131 rs746087369 |
212 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs746087369 CA236473725 |
212 | G>E | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1324829161 CA384520205 |
212 | G>R | No |
ClinGen gnomAD |
|
rs1565763631 CA384520201 |
213 | P>T | No |
ClinGen Ensembl |
|
CA384520188 rs757561510 |
214 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM5460038 COSM5460037 COSM5460036 CA236473712 rs374949026 |
215 | A>T | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Cosmic ESP NCI-TCGA |
RCV000886854 CA6532124 rs138831127 |
218 | T>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA236473685 rs778789161 |
218 | T>I | No |
ClinGen gnomAD |
|
rs764796690 CA6532123 |
220 | A>T | No |
ClinGen ExAC gnomAD |
|
CA6532121 rs754730560 |
222 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs754730560 CA6532122 |
222 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6532120 rs766130559 |
222 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6532119 rs764625944 |
224 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1232773081 CA384520122 |
225 | P>S | No |
ClinGen gnomAD |
|
CA236473153 rs1021668011 |
226 | G>A | No |
ClinGen Ensembl |
|
rs1322360947 CA384520111 |
227 | Q>* | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
rs145043427 CA6532090 |
228 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
COSM4948457 rs779519570 COSM4948456 COSM1361817 CA6532089 |
228 | R>H | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Cosmic ExAC NCI-TCGA gnomAD |
rs755563251 CA6532088 |
229 | T>M | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA6532086 rs779677866 |
230 | D>N | No |
ClinGen ExAC gnomAD |
|
rs755645425 CA6532085 |
231 | E>Q | No |
ClinGen ExAC gnomAD |
|
CA384520071 rs1239447113 |
233 | L>P | No |
ClinGen TOPMed |
|
CA384520065 rs1457784427 |
234 | D>G | No |
ClinGen TOPMed |
|
rs1177505509 CA384520048 |
237 | F>L | No |
ClinGen TOPMed |
|
rs61733251 CA236473100 |
238 | E>* | No |
ClinGen Ensembl |
|
rs1349932505 CA384520027 |
239 | E>D | No |
ClinGen gnomAD |
|
CA6532084 rs750078963 |
240 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6532083 rs767091419 COSM3739683 COSM3739681 |
247 | A>V | liver [Cosmic] | No |
ClinGen cosmic curated ExAC |
CA384519973 rs1592563936 |
248 | H>P | No |
ClinGen Ensembl |
|
rs878890466 CA236473090 |
249 | L>P | No |
ClinGen gnomAD |
|
CA236473088 rs890174470 |
250 | S>P | No |
ClinGen Ensembl |
|
TCGA novel | 250 | S>Y | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA6532082 rs761602671 |
251 | N>D | No |
ClinGen ExAC gnomAD |
|
rs1441261063 CA384519954 |
251 | N>I | No |
ClinGen gnomAD |
|
CA384519946 rs1298335722 |
252 | S>L | No |
ClinGen gnomAD |
|
rs1565762269 CA384519931 |
253 | V>E | No |
ClinGen Ensembl |
|
CA6532061 rs763850348 |
255 | R>* | No |
ClinGen ExAC gnomAD |
|
rs1015916972 CA236472834 |
255 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA6532060 rs758260500 |
257 | L>I | No |
ClinGen ExAC gnomAD |
|
CA6532059 rs369901031 |
258 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
COSM939695 COSM4864221 COSM1586484 CA6532058 rs765086897 |
258 | A>V | Variant assessed as Somatic; MODERATE impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen NCI-TCGA Cosmic cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
CA6532056 rs773185261 |
259 | A>T | No |
ClinGen ExAC gnomAD |
|
CA6532054 rs200912184 |
260 | V>G | No |
ClinGen ExAC gnomAD |
|
CA6532055 COSM1736845 COSM1736847 rs767683493 |
260 | V>I | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA384519887 rs1373481166 |
261 | L>P | No |
ClinGen gnomAD |
|
CA384519888 rs138736592 |
261 | L>V | No |
ClinGen ExAC gnomAD |
|
rs148138090 CA236472778 |
262 | L>H | No |
ClinGen ESP TOPMed |
|
rs776073946 CA6532050 |
264 | E>* | No |
ClinGen ExAC |
|
CA384519854 rs1171796650 |
266 | H>R | No |
ClinGen gnomAD |
|
rs1565762119 CA384519856 |
266 | H>Y | No |
ClinGen Ensembl |
|
rs1168566932 CA384519820 |
271 | T>N | No |
ClinGen gnomAD |
|
CA6532048 rs543303042 |
271 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA384519817 rs1263978891 |
272 | V>M | No |
ClinGen TOPMed gnomAD |
|
CA384519727 rs1385771965 |
277 | G>W | No |
ClinGen TOPMed gnomAD |
|
CA6532024 rs758066482 |
278 | D>E | No |
ClinGen ExAC gnomAD |
|
CA384519714 COSM3461183 COSM3461185 COSM3461184 rs1388099441 |
278 | D>N | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Cosmic NCI-TCGA gnomAD |
CA6532023 rs747844746 |
280 | G>C | No |
ClinGen ExAC gnomAD |
|
CA236472581 rs912774535 |
280 | G>D | No |
ClinGen Ensembl |
|
rs747844746 CA384519668 |
280 | G>R | No |
ClinGen ExAC gnomAD |
|
CA6532022 rs778540607 |
281 | T>A | No |
ClinGen ExAC gnomAD |
|
CA6532021 rs754866777 |
282 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM6072597 COSM6072596 COSM6072595 |
283 | W>L | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA384519603 rs1164398108 |
284 | Y>H | No |
ClinGen gnomAD |
|
TCGA novel | 285 | I>V | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
rs780054118 CA6532019 |
287 | W>* | No |
ClinGen ExAC |
|
rs757340843 CA6532018 |
287 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1592562359 CA384519500 |
289 | G>* | No |
ClinGen Ensembl |
|
CA384519496 rs1362508599 |
289 | G>A | No |
ClinGen gnomAD |
|
rs999546162 CA236472535 |
292 | N>K | No |
ClinGen TOPMed gnomAD |
|
rs371663751 CA6532017 |
293 | V>L | No |
ClinGen ESP ExAC gnomAD |
|
rs371663751 CA6532016 |
293 | V>M | No |
ClinGen ESP ExAC gnomAD |
|
rs763247391 CA6532015 |
294 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384519378 rs1426939337 |
297 | G>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
RCV000948396 CA6531970 rs145878042 |
300 | L>P | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA6531968 rs781339806 |
301 | V>G | No |
ClinGen ExAC gnomAD |
|
rs1160303125 CA384519181 |
301 | V>M | No |
ClinGen TOPMed |
|
TCGA novel | 302 | T>A | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
rs566550955 CA6531965 |
305 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs566550955 CA6531964 |
305 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1441602024 CA384519128 |
306 | E>K | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA384519082 rs1429320962 |
308 | D>G | No |
ClinGen TOPMed |
|
CA6531961 rs766723911 |
314 | A>D | No |
ClinGen ExAC gnomAD |
|
rs766723911 CA6531962 |
314 | A>G | No |
ClinGen ExAC gnomAD |
|
rs1371873130 CA384518985 |
314 | A>T | No |
ClinGen TOPMed |
|
rs750871908 CA6531959 |
317 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1277653854 CA384518889 |
319 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA6531958 rs562939516 |
320 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1219263374 CA384518883 |
320 | P>S | No |
ClinGen gnomAD |
|
rs377235272 CA6531956 |
321 | R>Q | No |
ClinGen ESP ExAC gnomAD |
|
CA6531957 rs761190001 |
321 | R>W | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs550088855 CA6531955 |
324 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA6531952 rs769702763 |
325 | I>N | No |
ClinGen ExAC gnomAD |
|
CA6531953 rs775352486 |
325 | I>V | No |
ClinGen ExAC gnomAD |
|
COSM1676905 COSM1676903 CA6531951 rs766946867 |
328 | R>* | ovary [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
rs1328917954 CA384518762 |
328 | R>Q | No |
ClinGen gnomAD |
|
rs201965876 CA6531950 |
330 | D>N | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
rs1467600538 CA384518732 |
330 | D>V | No |
ClinGen TOPMed |
|
CA6531949 rs756792898 |
331 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1239555937 CA384518713 |
333 | H>D | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA6531948 rs746964989 |
334 | F>I | No |
ClinGen ExAC gnomAD |
|
rs950476445 CA384518700 |
334 | F>L | No |
ClinGen Ensembl |
|
CA384518695 rs1270309308 |
335 | L>R | No |
ClinGen Ensembl |
|
CA6531946 rs147783202 |
336 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA384518694 rs147783202 |
336 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6531945 rs367665004 |
336 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531947 rs147783202 |
336 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs780266532 CA6531944 |
337 | V>A | No |
ClinGen ExAC gnomAD |
|
rs780266532 CA384518688 |
337 | V>E | No |
ClinGen ExAC gnomAD |
|
COSM3398742 COSM3398741 COSM3398743 |
339 | K>N | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
rs1320049816 CA384518642 |
343 | N>S | No |
ClinGen gnomAD |
|
COSM3461181 COSM3461182 rs767963161 COSM3461180 CA6531941 |
344 | R>C | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Cosmic ExAC NCI-TCGA TOPMed gnomAD |
CA6531939 rs757761329 |
344 | R>H | No |
ClinGen ExAC gnomAD |
|
rs767963161 CA6531940 |
344 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1286324691 CA384518623 |
346 | I>T | No |
ClinGen gnomAD |
|
CA384518616 rs1395889149 |
347 | K>R | No |
ClinGen TOPMed |
|
CA6531915 rs757861762 |
350 | E>K | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 351 | A>V | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
rs532913653 CA384518052 |
352 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs764885644 CA6531913 |
353 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384518036 rs564238938 |
355 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
COSM939694 COSM3728257 CA6531911 rs564238938 COSM1586485 |
355 | R>Q | Variant assessed as Somatic; MODERATE impact. endometrium haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen NCI-TCGA Cosmic cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
rs766892669 CA6531912 |
355 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1592559652 CA384518025 |
357 | E>G | No |
ClinGen Ensembl |
|
CA6531908 rs760399497 |
360 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1194341658 CA384517937 |
362 | V>L | No |
ClinGen TOPMed |
|
CA6531907 rs527530696 |
363 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA384517923 rs1555190278 |
363 | V>M | No |
ClinGen Ensembl |
|
rs775873450 CA384517850 |
368 | R>I | No |
ClinGen TOPMed |
|
CA236471891 rs775873450 |
368 | R>K | No |
ClinGen TOPMed |
|
rs775873450 CA384517852 |
368 | R>T | No |
ClinGen TOPMed |
|
COSM6136921 COSM6136923 COSM6136922 |
371 | Q>E | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
rs1431539290 CA384517803 |
371 | Q>R | No |
ClinGen TOPMed gnomAD |
|
rs370751497 CA384517780 |
373 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531904 rs370751497 |
373 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
COSM4784904 COSM4784905 COSM1361816 |
374 | G>D | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
rs12422983 VAR_047926 CA6531903 |
374 | G>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1286924408 CA384517738 |
376 | S>C | No |
ClinGen TOPMed |
|
rs746087227 CA6531902 |
377 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs868510642 CA236471874 |
377 | R>Q | No |
ClinGen gnomAD |
|
CA6531901 rs529387182 |
378 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA384517723 rs1253926482 |
378 | P>S | No |
ClinGen gnomAD |
|
rs747342924 CA6531899 |
379 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs747342924 CA384517703 |
379 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs778306368 CA6531898 |
380 | T>A | No |
ClinGen ExAC gnomAD |
|
CA384517689 rs1272701073 |
380 | T>I | No |
ClinGen TOPMed |
|
rs1339785651 CA384517681 |
381 | P>S | No |
ClinGen gnomAD |
|
CA6531897 rs182215210 |
382 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs182215210 CA384517671 |
382 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA6531896 rs753292366 |
383 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs754590304 CA6531894 |
385 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs778558248 CA6531895 |
385 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs201953513 CA6531875 |
386 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs1401100622 CA384517551 |
386 | Y>C | No |
ClinGen gnomAD |
|
COSM3461178 COSM3461177 COSM3461179 |
391 | G>D | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA384517507 rs1188705677 |
393 | P>A | No |
ClinGen gnomAD |
|
rs1235604091 CA384517505 |
393 | P>L | No |
ClinGen TOPMed |
|
CA6531873 rs78160254 |
395 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA384517472 rs1186584937 |
398 | E>G | No |
ClinGen TOPMed |
|
rs1196976647 CA384517439 |
403 | A>S | No |
ClinGen gnomAD |
|
CA384517436 rs1447263872 |
403 | A>V | No |
ClinGen TOPMed |
|
CA6531870 rs751442901 |
405 | G>R | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 406 | P>Q | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384517402 rs1435656137 |
408 | S>F | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
rs370389518 CA6531869 |
409 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
rs199517036 CA6531868 |
409 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA384517394 rs1377836650 |
410 | A>T | No |
ClinGen gnomAD |
|
CA236471681 rs915661494 |
410 | A>V | No |
ClinGen Ensembl |
|
COSM3812087 COSM3812086 COSM3812088 |
411 | H>Y | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA384517377 rs1390682535 |
412 | D>E | No |
ClinGen gnomAD |
|
rs199960016 CA6531866 |
412 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA236471680 rs982187653 |
414 | T>K | No |
ClinGen TOPMed |
|
CA384517320 rs1225378182 |
416 | T>I | No |
ClinGen gnomAD |
|
CA384517306 rs576540094 |
417 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs150971079 CA6531842 |
417 | F>V | No |
ClinGen ESP ExAC gnomAD |
|
rs776130389 CA6531840 |
418 | L>F | No |
ClinGen ExAC gnomAD |
|
rs1401046973 CA384517288 |
419 | S>G | No |
ClinGen gnomAD |
|
rs369117866 CA236471505 |
419 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA236471501 rs761149676 |
420 | D>N | No |
ClinGen gnomAD |
|
TCGA novel | 421 | F>S | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
COSM1586486 COSM4864820 COSM939693 |
424 | T>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA384517191 rs1176545355 |
426 | R>K | No |
ClinGen gnomAD |
|
CA384517182 rs1481108118 |
427 | V>F | No |
ClinGen gnomAD |
|
CA384517151 rs1475651945 |
429 | M>I | No |
ClinGen TOPMed gnomAD |
|
CA236471496 COSM1676902 COSM1676900 rs975240111 |
429 | M>K | skin [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
rs770598764 CA6531836 |
429 | M>V | No |
ClinGen ExAC gnomAD |
|
CA384517124 rs1185069962 |
431 | S>N | No |
ClinGen TOPMed gnomAD |
|
rs148472439 CA236471480 |
432 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6531833 rs148472439 |
432 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1020664475 CA236471466 |
433 | Q>H | No |
ClinGen TOPMed gnomAD |
|
rs1227273282 CA384517088 |
434 | L>I | No |
ClinGen TOPMed |
|
CA384517071 rs1258048686 |
435 | C>Y | No |
ClinGen gnomAD |
|
CA6531830 rs141880710 |
436 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1282801453 CA384517051 |
436 | A>V | No |
ClinGen gnomAD |
|
rs1381622889 CA384517047 |
437 | A>T | No |
ClinGen gnomAD |
|
CA384517036 rs1336945463 |
438 | L>V | No |
ClinGen gnomAD |
|
rs1169261566 CA384517013 |
440 | H>Q | No |
ClinGen gnomAD |
|
rs1397484395 CA384517017 |
440 | H>R | No |
ClinGen gnomAD |
|
CA6531811 rs370152009 |
443 | H>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1294419164 CA384516983 |
443 | H>Y | No |
ClinGen gnomAD |
|
CA236471287 rs374818101 |
446 | P>A | No |
ClinGen ESP TOPMed gnomAD |
|
CA384516937 rs374818101 |
446 | P>S | No |
ClinGen ESP TOPMed gnomAD |
|
CA384516947 rs374818101 |
446 | P>T | No |
ClinGen ESP TOPMed gnomAD |
|
rs201879522 CA6531810 |
447 | A>V | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
TCGA novel | 448 | G>D | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA236471278 rs971137925 |
448 | G>S | No |
ClinGen TOPMed |
|
rs527644735 CA6531808 |
449 | G>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs758639779 CA6531807 |
450 | S>N | No |
ClinGen ExAC gnomAD |
|
CA6531805 rs140023214 |
450 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531804 rs562053494 |
451 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs777176321 CA6531803 |
452 | Q>* | No |
ClinGen ExAC gnomAD |
|
rs1592556699 CA384516818 |
453 | E>A | No |
ClinGen Ensembl |
|
CA6531802 rs765812810 |
453 | E>D | No |
ClinGen ExAC gnomAD |
|
CA6531801 rs760195684 |
454 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs772695180 CA6531800 |
454 | R>H | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA384516774 rs1592556649 |
456 | T>P | No |
ClinGen Ensembl |
|
rs146484121 CA6531799 |
457 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs774174711 CA6531797 |
458 | V>I | No |
ClinGen ExAC gnomAD |
|
rs142826491 CA236471254 |
459 | C>* | No |
ClinGen ESP gnomAD |
|
CA384516678 rs1209598663 |
460 | N>K | No |
ClinGen gnomAD |
|
CA384516673 rs1488156555 |
461 | K>E | No |
ClinGen gnomAD |
|
TCGA novel | 461 | K>N | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384516664 rs1357829046 |
461 | K>R | No |
ClinGen gnomAD |
|
rs1216065190 CA384516653 |
462 | R>G | No |
ClinGen gnomAD |
|
CA6531795 rs749232919 |
462 | R>K | No |
ClinGen ExAC gnomAD |
|
CA6531796 rs749232919 |
462 | R>T | No |
ClinGen ExAC gnomAD |
|
rs1222318208 CA384516622 |
463 | Q>* | No |
ClinGen gnomAD |
|
CA384516595 rs1346108625 |
464 | Q>R | No |
ClinGen gnomAD |
|
CA6531794 rs780144118 |
465 | I>F | No |
ClinGen ExAC gnomAD |
|
rs138220855 CA6531791 |
467 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6531792 COSM3954791 rs747106424 COSM3954793 |
467 | R>W | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
CA6531790 rs758612645 |
468 | L>Q | No |
ClinGen ExAC gnomAD |
|
CA6531789 rs752908345 |
469 | V>G | No |
ClinGen ExAC gnomAD |
|
CA384516497 rs1247362018 |
469 | V>L | No |
ClinGen gnomAD |
|
rs997986601 CA384516458 |
470 | S>R | No |
ClinGen gnomAD |
|
rs1470326106 CA384516437 |
471 | Q>H | No |
ClinGen gnomAD |
|
rs900827633 CA236471246 |
471 | Q>P | No |
ClinGen Ensembl |
|
rs765617530 CA6531788 |
472 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 472 | W>C | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA236471240 rs903532820 |
473 | V>G | No |
ClinGen Ensembl |
|
rs1192107859 CA384516401 |
474 | A>D | No |
ClinGen gnomAD |
|
rs1592556359 CA384516387 |
475 | L>P | No |
ClinGen Ensembl |
|
CA384516393 rs1428360371 |
475 | L>V | No |
ClinGen gnomAD |
|
rs374937623 CA6531785 |
476 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs374937623 CA6531786 |
476 | Y>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA236471227 rs866765126 |
477 | G>C | No |
ClinGen Ensembl |
|
rs1253846700 CA384516311 |
479 | M>I | No |
ClinGen gnomAD |
|
rs1486658053 CA384516318 |
479 | M>T | No |
ClinGen gnomAD |
|
rs1385439198 CA384516327 |
479 | M>V | No |
ClinGen TOPMed |
|
CA384516300 rs1565758777 |
480 | L>F | No |
ClinGen Ensembl |
|
rs760140612 CA6531783 |
480 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531782 rs371742959 |
481 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1323209897 CA384516223 |
483 | D>G | No |
ClinGen gnomAD |
|
COSM4042110 COSM4042112 COSM4042111 |
484 | P>H | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
rs766986916 CA6531781 |
484 | P>R | No |
ClinGen ExAC gnomAD |
|
rs761514673 CA6531780 |
486 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531778 rs768499017 |
487 | T>I | No |
ClinGen ExAC gnomAD |
|
rs775518205 CA6531776 |
490 | L>F | No |
ClinGen ExAC gnomAD |
|
COSM4404849 COSM4404850 COSM4404848 |
494 | S>P | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA236471125 rs958000014 |
495 | D>N | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA384515890 rs1411048812 |
497 | V>A | No |
ClinGen Ensembl |
|
rs1444879518 CA384515870 |
498 | G>A | No |
ClinGen TOPMed gnomAD |
|
rs376060459 CA236471099 |
499 | R>G | No |
ClinGen Ensembl |
|
CA384515854 rs1179099264 |
499 | R>K | No |
ClinGen gnomAD |
|
CA6531758 rs769758965 |
499 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1229957737 CA384515846 |
500 | D>N | No |
ClinGen TOPMed |
|
rs1592555704 CA384515821 |
501 | T>P | No |
ClinGen Ensembl |
|
CA6531757 rs770919870 |
502 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531756 rs200338454 |
502 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6531755 rs200338454 |
502 | R>Q | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
CA384515784 rs1282361840 |
503 | L>R | No |
ClinGen TOPMed |
|
rs1565758337 CA384515710 |
507 | L>Q | No |
ClinGen Ensembl |
|
CA384515601 rs1290773478 |
512 | P>T | No |
ClinGen gnomAD |
|
rs1246372127 CA384515579 |
513 | E>K | No |
ClinGen gnomAD |
|
rs1180737788 CA384515552 |
514 | R>K | No |
ClinGen TOPMed |
|
CA6531753 rs377464139 |
515 | R>W | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
COSM431155 COSM4813871 COSM4813870 CA236471073 rs966849072 |
516 | R>* | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Cosmic NCI-TCGA gnomAD |
CA384515527 rs966849072 |
516 | R>G | No |
ClinGen gnomAD |
|
rs746514278 CA6531752 |
516 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs746514278 CA6531751 |
516 | R>Q | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
CA6531750 rs61709815 RCV000968253 VAR_061784 |
517 | C>Y | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
TCGA novel | 519 | R>M | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 520 | L>F | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384514511 rs1447822335 |
524 | C>Y | No |
ClinGen gnomAD |
|
rs75903148 CA236468190 |
526 | N>D | No |
ClinGen gnomAD |
|
rs1264377183 CA384514452 |
528 | S>F | No |
ClinGen gnomAD |
|
rs757672971 CA6531727 |
530 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384512787 rs1592547431 |
533 | A>T | No |
ClinGen Ensembl |
|
CA6531671 rs573050276 |
534 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
rs146898882 CA6531672 |
534 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs142663335 CA6531670 |
536 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1175725493 CA384512718 |
537 | P>L | No |
ClinGen gnomAD |
|
CA384512725 rs1404005009 |
537 | P>S | No |
ClinGen gnomAD |
|
rs1045858600 CA236466454 |
539 | W>* | No |
ClinGen TOPMed |
|
rs1045858600 CA384512681 |
539 | W>C | No |
ClinGen TOPMed |
|
rs772626576 CA6531668 |
539 | W>G | No |
ClinGen ExAC gnomAD |
|
CA384512669 rs1168823069 |
540 | L>F | No |
ClinGen gnomAD |
|
CA384512666 rs1592547312 |
540 | L>P | No |
ClinGen Ensembl |
|
CA6531666 rs774927863 |
542 | N>D | No |
ClinGen ExAC gnomAD |
|
rs767993156 CA6531665 |
542 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs767993156 CA384512634 |
542 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531664 rs748854576 |
543 | Q>K | No |
ClinGen ExAC gnomAD |
|
CA236466420 rs138607493 |
545 | E>K | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed |
rs181245276 CA6531662 |
546 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs745569032 CA6531661 |
549 | G>S | No |
ClinGen ExAC gnomAD |
|
CA6531660 rs780951186 |
553 | A>D | No |
ClinGen ExAC gnomAD |
|
CA384512485 rs1306693926 |
553 | A>T | No |
ClinGen gnomAD |
|
CA384512476 rs1230901796 |
554 | I>T | No |
ClinGen gnomAD |
|
CA384512469 rs1592547184 |
555 | Q>P | No |
ClinGen Ensembl |
|
CA236466383 rs930133188 |
556 | V>G | No |
ClinGen TOPMed |
|
rs1336197474 CA384512456 |
557 | G>E | No |
ClinGen gnomAD |
|
rs1418462186 CA384512415 |
561 | P>L | No |
ClinGen gnomAD |
|
rs748096159 CA6531637 |
562 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA6531636 rs368286046 COSM1645704 |
564 | I>V | kidney [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
rs756270848 CA6531635 |
565 | C>F | No |
ClinGen ExAC gnomAD |
|
CA6531633 rs200527655 |
566 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs202109036 CA6531631 |
566 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA384512386 rs202109036 |
566 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531630 rs202109036 |
566 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531632 rs200527655 |
566 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763502274 CA6531629 |
567 | P>T | No |
ClinGen ExAC gnomAD |
|
rs1445829075 CA384512370 |
569 | H>R | No |
ClinGen TOPMed |
|
CA6531628 rs149051230 |
569 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1290735431 CA384512365 |
570 | S>P | No |
ClinGen gnomAD |
|
CA236466125 rs897301048 |
571 | V>A | No |
ClinGen TOPMed gnomAD |
|
rs1345271343 CA384512348 |
572 | L>F | No |
ClinGen gnomAD |
|
CA6531626 rs535109543 |
573 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
CA384512346 rs764658160 |
573 | T>P | No |
ClinGen ExAC gnomAD |
|
rs764658160 CA6531627 |
573 | T>S | No |
ClinGen ExAC gnomAD |
|
CA236466092 rs1029917479 |
574 | L>M | No |
ClinGen gnomAD |
|
rs1384984216 CA384512341 |
574 | L>P | No |
ClinGen TOPMed |
|
rs776214675 CA6531625 |
575 | Q>K | No |
ClinGen ExAC gnomAD |
|
rs144954699 CA6531624 |
580 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs899984014 CA384512298 |
582 | V>L | No |
ClinGen TOPMed gnomAD |
|
rs899984014 CA236466082 |
582 | V>M | No |
ClinGen TOPMed gnomAD |
|
COSM939692 COSM1586488 |
583 | R>I | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA6531622 rs773048989 |
583 | R>K | No |
ClinGen ExAC gnomAD |
|
COSM3416883 COSM3416882 |
584 | E>* | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA236466075 rs1038566929 |
584 | E>D | No |
ClinGen Ensembl |
|
CA384512287 rs748055367 COSM3461170 COSM3461169 |
584 | E>K | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Cosmic ExAC NCI-TCGA gnomAD |
rs748055367 CA6531620 |
584 | E>Q | No |
ClinGen ExAC gnomAD |
|
CA384512280 rs1458468289 |
585 | V>M | No |
ClinGen TOPMed |
|
COSM3871672 COSM3871673 |
587 | A>T | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
rs1453573601 CA384512260 |
588 | A>T | No |
ClinGen gnomAD |
|
rs569631267 CA6531619 |
588 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs781462735 CA6531616 |
591 | Q>* | No |
ClinGen ExAC gnomAD |
|
rs549848412 CA6531615 |
592 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs764514380 CA236466039 |
594 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM939691 COSM1586489 |
594 | G>D | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
rs764514380 CA6531613 |
594 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs758693193 CA6531612 |
595 | W>R | No |
ClinGen ExAC gnomAD |
|
rs767307384 CA236466035 |
598 | G>A | No |
ClinGen gnomAD |
|
CA384512111 rs1592545832 |
600 | V>G | No |
ClinGen Ensembl |
|
rs201865687 CA6531611 |
600 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1464896803 CA384512099 |
601 | L>P | No |
ClinGen TOPMed |
|
CA6531609 rs759004260 |
602 | V>A | No |
ClinGen ExAC gnomAD |
|
rs761724079 CA6531608 |
603 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384512044 rs1408039589 |
605 | N>D | No |
ClinGen TOPMed |
|
rs1428469397 CA384512038 |
605 | N>S | No |
ClinGen gnomAD |
|
CA384512010 rs1172988528 |
607 | A>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA6531607 rs765865618 |
607 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1565752224 CA384511241 |
609 | D>E | No |
ClinGen Ensembl |
|
rs1333456471 CA384511987 |
609 | D>N | No |
ClinGen TOPMed |
|
rs1206261383 CA384511229 |
611 | I>T | No |
ClinGen gnomAD |
|
CA6531589 rs760119802 |
612 | G>D | No |
ClinGen ExAC gnomAD |
|
rs750044338 CA6531588 |
614 | Q>K | No |
ClinGen ExAC gnomAD |
|
CA6531587 rs767107554 |
614 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762976932 CA6531583 |
618 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs769387388 CA6531582 |
618 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762976932 CA384511190 |
618 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs892174251 CA236465053 |
619 | G>S | No |
ClinGen TOPMed |
|
CA6531581 rs770984223 |
621 | A>S | No |
ClinGen ExAC gnomAD |
|
CA6531580 rs371160640 |
622 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531579 rs778007965 |
626 | L>F | No |
ClinGen ExAC gnomAD |
|
CA384511147 rs778007965 |
626 | L>V | No |
ClinGen ExAC gnomAD |
|
CA6531578 rs772248238 |
627 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 628 | E>* | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
rs146740422 CA6531576 |
629 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531574 rs779247862 |
629 | R>H | No |
ClinGen ExAC TOPMed |
|
CA384511128 rs146740422 |
629 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531573 rs771968508 |
630 | L>A | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 630 | L>F | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
rs755344226 CA6531572 |
630 | L>H | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 634 | N>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384511086 rs1320681866 |
635 | P>L | No |
ClinGen gnomAD |
|
CA384511081 rs1289998337 |
636 | Q>R | No |
ClinGen gnomAD |
|
rs1229498674 CA384511065 |
638 | V>A | No |
ClinGen TOPMed gnomAD |
|
rs1229498674 CA384511064 |
638 | V>G | No |
ClinGen TOPMed gnomAD |
|
CA384511063 rs1287634260 |
639 | H>N | No |
ClinGen gnomAD |
|
CA6531568 rs199902739 |
639 | H>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
COSM4935954 COSM4935955 |
641 | L>P | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
rs143474061 CA236464633 |
642 | I>V | No |
ClinGen ESP TOPMed gnomAD |
|
rs756830911 CA6531543 |
644 | H>Q | No |
ClinGen ExAC gnomAD |
|
CA384510780 rs1232340519 |
645 | P>A | No |
ClinGen gnomAD |
|
CA384510779 rs1232340519 |
645 | P>S | No |
ClinGen gnomAD |
|
rs751199016 CA6531542 |
646 | D>E | No |
ClinGen ExAC gnomAD |
|
CA6531541 rs367991801 |
651 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1213041980 CA384510667 |
652 | V>L | No |
ClinGen gnomAD |
|
CA384510653 rs1592539850 |
653 | G>S | No |
ClinGen Ensembl |
|
CA236464597 rs985377635 |
655 | A>T | No |
ClinGen Ensembl |
|
CA384510600 rs1298466544 |
657 | G>R | No |
ClinGen gnomAD |
|
rs758222582 CA6531540 |
659 | D>H | No |
ClinGen ExAC gnomAD |
|
rs80097705 CA6531538 |
660 | L>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
RCV000967264 CA6531537 rs80097705 |
660 | L>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs776637340 CA6531535 |
661 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531536 rs759375739 |
661 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531534 rs373844546 |
662 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
CA384510477 rs1592539738 |
665 | D>A | No |
ClinGen Ensembl |
|
CA236464565 rs1026791963 |
666 | L>R | No |
ClinGen Ensembl |
|
rs1188693689 CA384510460 |
668 | G>D | No |
ClinGen gnomAD |
|
CA6531533 rs761906844 |
669 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs774520669 CA6531532 |
671 | T>M | No |
ClinGen ExAC gnomAD |
|
COSM6072598 COSM6072599 |
671 | T>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
rs1483503703 CA384510435 |
672 | D>V | No |
ClinGen gnomAD |
|
rs749573837 CA384510432 |
673 | H>N | No |
ClinGen ExAC gnomAD |
|
CA384510427 rs148525602 |
673 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs749573837 CA6531529 |
673 | H>Y | No |
ClinGen ExAC gnomAD |
|
rs1275597002 CA384510414 |
675 | W>* | No |
ClinGen gnomAD |
|
rs75289962 CA236464537 |
676 | S>N | No |
ClinGen Ensembl |
|
rs770262528 CA6531527 |
677 | L>F | No |
ClinGen ExAC gnomAD |
|
CA384510378 rs1592539577 |
680 | S>C | No |
ClinGen Ensembl |
|
CA384510368 rs1592539568 |
681 | I>T | No |
ClinGen Ensembl |
|
rs781767626 CA6531525 |
682 | H>Y | No |
ClinGen ExAC gnomAD |
|
rs1397141496 CA384510353 |
683 | Q>R | No |
ClinGen gnomAD |
|
CA384510329 rs1592539055 |
685 | E>V | No |
ClinGen Ensembl |
|
CA6531491 rs369449081 |
686 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1489502671 CA384510319 |
687 | I>N | No |
ClinGen gnomAD |
|
CA6531488 rs369711442 |
689 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
TCGA novel | 689 | Y>C | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384510296 rs546717867 |
690 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs546717867 CA6531486 |
690 | V>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA384510286 rs1480605355 |
692 | G>D | No |
ClinGen gnomAD |
|
rs1329048253 CA384510266 |
695 | H>R | No |
ClinGen gnomAD |
|
rs778330392 CA6531483 |
696 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA236464250 rs375616623 COSM1586490 |
697 | R>Q | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP TOPMed gnomAD |
CA6531481 rs144726123 |
697 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA384510249 rs112035828 |
698 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs112035828 CA6531480 |
698 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6531479 rs755910369 |
699 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384510224 rs1592538875 |
700 | T>P | No |
ClinGen Ensembl |
|
CA384510213 rs1592538863 |
701 | T>P | No |
ClinGen Ensembl |
|
CA6531476 rs139231646 |
702 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531477 rs139231646 |
702 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs755237106 CA6531473 |
704 | L>P | No |
ClinGen ExAC gnomAD |
|
COSM3871670 COSM3871671 |
705 | E>K | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
rs372675211 CA6531472 |
706 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs367938428 CA6531471 |
706 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA6531470 rs368706450 |
707 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs747930240 CA6531469 |
709 | R>C | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs778903072 CA6531468 |
709 | R>H | No |
ClinGen ExAC gnomAD |
|
rs747930240 CA236464233 |
709 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773902126 CA6531467 |
710 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773902126 CA384510097 |
710 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531465 rs768121835 |
710 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531466 rs773902126 |
710 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA236464189 rs147300856 |
712 | N>H | No |
ClinGen ESP TOPMed gnomAD |
|
CA384510065 rs1233545370 |
712 | N>S | No |
ClinGen gnomAD |
|
TCGA novel | 715 | Q>P | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384510010 rs1433682416 |
716 | Y>C | No |
ClinGen gnomAD |
|
rs1412617978 CA384509964 |
719 | A>V | No |
ClinGen gnomAD |
|
rs144047493 CA6531461 |
721 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA384509883 rs1188065302 |
725 | C>Y | No |
ClinGen gnomAD |
|
CA6531458 rs746977160 |
726 | P>L | No |
ClinGen ExAC gnomAD |
|
CA236464097 rs956562354 |
726 | P>S | No |
ClinGen TOPMed gnomAD |
|
rs371356808 CA384509858 |
727 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs371356808 CA6531455 COSM3765645 |
727 | V>M | liver [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
rs1272024998 CA384509823 |
729 | G>D | No |
ClinGen gnomAD |
|
TCGA novel | 729 | G>S | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
CA384509831 rs1362859313 |
729 | G>S | No |
ClinGen TOPMed |
|
CA384509807 rs767831835 |
731 | R>G | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 731 | R>G | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
rs375977878 CA236464019 |
731 | R>Q | No |
ClinGen ESP TOPMed |
|
rs767831835 CA6531451 |
731 | R>W | No |
ClinGen ExAC gnomAD |
|
CA384509790 rs762380970 |
732 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531449 rs762380970 |
732 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384509788 rs1445766750 |
732 | A>V | No |
ClinGen gnomAD |
|
rs930965429 CA236464013 |
733 | Q>* | No |
ClinGen Ensembl |
|
rs930965429 CA384509781 |
733 | Q>E | No |
ClinGen Ensembl |
|
CA6531448 rs774728172 |
734 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs763540141 CA6531447 |
735 | L>F | No |
ClinGen ExAC gnomAD |
|
CA6531446 rs371759402 |
736 | R>M | No |
ClinGen ESP ExAC gnomAD |
|
CA6531445 rs775080828 |
736 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531443 rs368203022 |
742 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs781294541 CA6531412 |
745 | L>F | No |
ClinGen ExAC gnomAD |
|
COSM3871669 COSM3871668 |
746 | K>T | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
TCGA novel | 747 | E>G | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No | NCI-TCGA |
rs751836755 CA6531410 |
748 | Q>K | No |
ClinGen ExAC gnomAD |
|
COSM263259 | 749 | K>N | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
rs1169629277 CA384509582 |
750 | N>D | No |
ClinGen TOPMed |
|
rs778155975 CA6531408 |
750 | N>K | No |
ClinGen ExAC gnomAD |
|
CA384509565 rs1160435959 |
752 | N>S | No |
ClinGen gnomAD |
|
rs764660320 CA6531405 |
753 | S>F | No |
ClinGen ExAC gnomAD |
|
CA236463778 rs950870029 |
754 | F>L | No |
ClinGen TOPMed |
|
rs1335383590 CA384509544 |
755 | F>C | No |
ClinGen gnomAD |
|
CA6531403 rs1555188149 |
756 | A>T | No |
ClinGen Ensembl |
|
CA384509535 rs758980561 |
757 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531402 rs758980561 |
757 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1267408633 CA384509527 |
758 | M>I | No |
ClinGen gnomAD |
|
rs765918128 CA384509529 |
758 | M>R | No |
ClinGen ExAC gnomAD |
|
rs765918128 CA6531400 |
758 | M>T | No |
ClinGen ExAC gnomAD |
|
CA6531401 rs753479265 |
758 | M>V | No |
ClinGen ExAC gnomAD |
|
CA384509493 rs1209193279 |
763 | N>T | No |
ClinGen gnomAD |
|
CA6531398 rs772059743 |
764 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531397 rs772059743 |
764 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531399 rs772059743 |
764 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1298845276 CA384509479 |
766 | I>L | No |
ClinGen gnomAD |
|
CA6531396 rs550320611 |
768 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA6531395 COSM939689 rs368244791 COSM1586491 |
768 | R>H | Variant assessed as Somatic; MODERATE impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen NCI-TCGA Cosmic cosmic curated 1000Genomes ESP ExAC NCI-TCGA gnomAD |
CA384509461 rs368244791 |
768 | R>L | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
rs1272499979 CA384509447 |
771 | H>N | No |
ClinGen TOPMed |
|
rs374319063 CA6531394 |
772 | T>S | No |
ClinGen ESP ExAC gnomAD |
|
CA384509427 rs1162798841 |
774 | E>Q | No |
ClinGen TOPMed gnomAD |
|
CA6531367 rs755428820 |
775 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA6531368 rs373278702 |
775 | R>W | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs369346288 CA6531366 |
777 | P>T | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
TCGA novel | 779 | K>E | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384509384 rs779365075 |
779 | K>R | No |
ClinGen ExAC gnomAD |
|
CA6531365 rs779365075 |
779 | K>T | No |
ClinGen ExAC gnomAD |
|
CA384509380 rs1592536664 |
780 | V>I | No |
ClinGen Ensembl |
|
rs201845012 CA6531364 |
781 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6531362 rs767312809 |
781 | R>Q | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs201845012 CA6531363 |
781 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6531361 rs373150406 |
784 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs370847369 CA6531358 |
785 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA384509350 rs370847369 |
785 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531360 rs200046122 |
785 | S>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531359 rs370847369 |
785 | S>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs760766068 CA6531355 |
786 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs773381104 CA6531354 |
786 | A>V | No |
ClinGen ExAC gnomAD |
|
rs772250149 CA6531353 |
787 | L>F | No |
ClinGen ExAC gnomAD |
|
rs769070035 CA6531350 |
788 | E>D | No |
ClinGen ExAC gnomAD |
|
rs774576850 CA6531351 |
788 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384509323 rs1592536515 |
790 | L>R | No |
ClinGen Ensembl |
|
rs1463059222 CA384509319 |
791 | L>P | No |
ClinGen gnomAD |
|
rs980965505 CA236462954 |
793 | P>L | No |
ClinGen Ensembl |
|
COSM3461158 rs1279150966 COSM3461157 CA384509282 |
795 | W>* | Variant assessed as Somatic; HIGH impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Cosmic NCI-TCGA gnomAD |
rs778728122 CA6531320 |
795 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531319 rs377225603 |
797 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs753781665 CA384509264 |
798 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384509263 rs1294702879 |
798 | R>Q | No |
ClinGen TOPMed gnomAD |
|
rs753781665 CA6531318 |
798 | R>W | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs1434320182 CA384509256 |
799 | V>A | No |
ClinGen gnomAD |
|
rs1335279111 CA384509258 |
799 | V>L | No |
ClinGen TOPMed |
|
rs1222965843 CA384509253 |
800 | Y>H | No |
ClinGen gnomAD |
|
rs1320099881 CA384509245 |
801 | R>* | No |
ClinGen gnomAD |
|
rs796826496 CA236462908 |
801 | R>L | No |
ClinGen TOPMed gnomAD |
|
rs796826496 CA384509243 |
801 | R>P | No |
ClinGen TOPMed gnomAD |
|
rs796826496 CA384509244 |
801 | R>Q | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA384509237 rs1174502161 |
803 | A>T | No |
ClinGen gnomAD |
|
rs898811581 CA236462898 |
805 | A>T | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA384509219 rs1227938967 |
806 | K>E | No |
ClinGen TOPMed |
|
rs1272824709 CA384509203 |
808 | S>Y | No |
ClinGen TOPMed |
|
rs372890819 CA6531316 |
809 | P>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA6531315 rs751695897 |
811 | V>A | No |
ClinGen ExAC gnomAD |
|
COSM3461155 COSM3461156 |
813 | P>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
TCGA novel | 814 | F>L | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA384509151 rs1592533927 |
815 | M>I | No |
ClinGen Ensembl |
|
CA384509161 rs1200754935 |
815 | M>L | No |
ClinGen TOPMed |
|
rs763136670 COSM4042102 COSM4042103 CA6531313 |
816 | P>S | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Cosmic ExAC NCI-TCGA TOPMed gnomAD |
rs763136670 CA384509148 |
816 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs201203454 CA236462824 |
817 | L>P | No |
ClinGen 1000Genomes |
|
rs1258583441 CA384509129 |
817 | L>V | No |
ClinGen gnomAD |
|
COSM6136930 COSM6136931 |
818 | L>F | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA6531311 rs765761936 |
819 | L>I | No |
ClinGen ExAC gnomAD |
|
rs1443124541 CA384507941 |
822 | M>K | No |
ClinGen gnomAD |
|
rs761133136 CA6531290 |
823 | T>I | No |
ClinGen ExAC gnomAD |
|
CA6531288 rs147988756 |
825 | I>L | No |
ClinGen ESP ExAC |
|
rs747780939 CA6531287 |
826 | H>Y | No |
ClinGen ExAC gnomAD |
|
CA384507869 rs1167623179 |
827 | E>K | No |
ClinGen gnomAD |
|
COSM1705507 COSM136894 |
828 | G>R | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
CA384507818 rs1252956209 |
830 | H>L | No |
ClinGen TOPMed |
|
CA6531285 rs768400643 |
830 | H>Y | No |
ClinGen ExAC gnomAD |
|
CA384507801 rs1482964729 |
831 | T>I | No |
ClinGen TOPMed |
|
TCGA novel | 831 | T>P | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA6531284 rs749055557 |
833 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs749055557 CA236462532 |
833 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531283 rs779875448 |
834 | E>D | No |
ClinGen ExAC gnomAD |
|
CA384507742 rs1258787036 |
836 | L>V | No |
ClinGen TOPMed |
|
rs1234147177 CA384507724 |
837 | I>T | No |
ClinGen TOPMed gnomAD |
|
CA384507731 rs1400840251 |
837 | I>V | No |
ClinGen TOPMed gnomAD |
|
TCGA novel | 841 | K>T | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA6531282 rs747700402 |
842 | M>T | No |
ClinGen ExAC gnomAD |
|
CA6531254 COSM939688 rs754179246 COSM1586492 |
843 | R>I | Variant assessed as Somatic; MODERATE impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen NCI-TCGA Cosmic cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs1290703588 CA384507488 |
843 | R>S | No |
ClinGen TOPMed |
|
rs754179246 CA384507493 |
843 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531252 rs756457834 |
844 | M>I | No |
ClinGen ExAC gnomAD |
|
rs759034284 CA6531253 |
844 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs759034284 CA384507479 COSM939687 COSM1651263 |
844 | M>V | Variant assessed as Somatic; MODERATE impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen NCI-TCGA Cosmic cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs1004952252 CA236462270 |
845 | M>I | No |
ClinGen gnomAD |
|
rs1220586727 CA384507440 |
845 | M>T | No |
ClinGen TOPMed |
|
CA236462264 rs866821955 |
846 | A>S | No |
ClinGen Ensembl |
|
rs1426172833 CA384507398 |
847 | R>T | No |
ClinGen gnomAD |
|
rs750903513 CA6531251 |
848 | A>D | No |
ClinGen ExAC TOPMed |
|
CA6531248 rs201397656 |
849 | A>S | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
rs201397656 CA6531249 |
849 | A>T | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
rs745940362 CA236462218 |
849 | A>V | No |
ClinGen TOPMed gnomAD |
|
CA6531246 rs762522438 |
850 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA6531247 rs143496473 |
850 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531245 rs775014528 |
851 | M>V | No |
ClinGen ExAC gnomAD |
|
CA384507273 rs1592531397 |
853 | H>P | No |
ClinGen Ensembl |
|
rs1306929225 CA384507245 |
854 | H>P | No |
ClinGen gnomAD |
|
rs1306929225 CA384507244 |
854 | H>R | No |
ClinGen gnomAD |
|
CA6531243 rs776528834 |
856 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770750442 CA6531241 |
856 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA6531239 rs200517997 |
857 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA6531209 rs758940907 |
861 | V>A | No |
ClinGen ExAC gnomAD |
|
CA236462192 rs986429485 |
861 | V>M | No |
ClinGen TOPMed |
|
TCGA novel | 862 | P>R | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
rs1565746702 CA384506744 |
866 | L>F | No |
ClinGen Ensembl |
|
CA6531207 rs556643345 |
866 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531206 rs764858235 |
867 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs753532357 CA6531204 |
869 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA6531203 rs766227935 |
869 | R>Q | No |
ClinGen ExAC gnomAD |
|
rs1307559693 CA384506640 |
870 | V>D | No |
ClinGen gnomAD |
|
CA384506622 rs1393079610 |
871 | S>Y | No |
ClinGen gnomAD |
|
rs1200953197 CA384506567 |
874 | H>N | No |
ClinGen TOPMed |
|
rs200257479 CA384506547 CA384506545 |
874 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1200953197 CA384506559 |
874 | H>Y | No |
ClinGen TOPMed |
|
CA6531200 rs767541828 |
875 | E>K | No |
ClinGen ExAC gnomAD |
|
CA6531199 rs761870576 |
876 | D>N | No |
ClinGen ExAC gnomAD |
|
CA384506515 rs1209999506 |
877 | S>G | No |
ClinGen TOPMed |
|
CA6531197 rs769925470 |
878 | Q>R | No |
ClinGen ExAC gnomAD |
|
CA384506480 rs1453114410 |
879 | V>M | No |
ClinGen gnomAD |
|
CA6531195 rs369531877 |
880 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA384506465 rs1252990039 |
880 | A>P | No |
ClinGen TOPMed gnomAD |
|
CA384506463 rs1252990039 |
880 | A>S | No |
ClinGen TOPMed gnomAD |
|
CA6531194 rs369531877 |
880 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1259866783 CA384506455 |
881 | R>G | No |
ClinGen gnomAD |
|
rs778156210 CA6531192 |
882 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs758891875 CA6531191 |
884 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 885 | C>R | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
rs1319926942 CA384506341 |
885 | C>Y | No |
ClinGen TOPMed gnomAD |
|
CA6531173 rs528517741 |
886 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs769084682 CA6531171 |
887 | E>G | No |
ClinGen ExAC |
|
rs1257039799 CA384506307 |
888 | Q>* | No |
ClinGen TOPMed gnomAD |
|
CA384506288 rs1437127577 |
889 | S>F | No |
ClinGen gnomAD |
|
rs143379828 CA236461762 |
891 | S>I | No |
ClinGen ESP TOPMed |
|
CA6531170 rs767450779 |
892 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384506250 rs559675833 |
893 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA384506243 rs755827558 |
893 | R>L | No |
ClinGen ExAC gnomAD |
|
CA6531168 rs755827558 |
893 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA6531169 rs559675833 |
893 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs371724746 CA6531167 |
894 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA236461739 rs368269374 |
894 | S>N | No |
ClinGen ESP gnomAD |
|
rs762005400 CA6531166 |
895 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs941901994 CA236461728 |
896 | A>T | No |
ClinGen TOPMed |
|
rs1211417844 CA384506207 |
896 | A>V | No |
ClinGen gnomAD |
|
CA6531165 rs757102622 |
897 | S>G | No |
ClinGen ExAC gnomAD |
|
rs1194708536 CA384506167 |
899 | W>* | No |
ClinGen gnomAD |
|
TCGA novel | 902 | V>A | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
rs762843965 CA6531162 |
903 | Q>L | No |
ClinGen ExAC gnomAD |
|
rs11542093 CA236461695 |
904 | Q>H | No |
ClinGen Ensembl |
|
rs753898828 CA6531161 |
904 | Q>K | No |
ClinGen ExAC gnomAD |
|
CA236461719 rs1001721665 |
904 | Q>R | No |
ClinGen TOPMed gnomAD |
|
CA384506057 rs1307339436 |
907 | V>D | No |
ClinGen TOPMed |
|
rs1334482248 CA384506063 |
907 | V>I | No |
ClinGen gnomAD |
|
CA6531159 rs374334310 |
908 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA384506049 rs1225713060 |
908 | I>V | No |
ClinGen TOPMed |
|
CA6531158 rs773434527 |
909 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA384506007 rs141087098 |
910 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs762207147 CA6531156 |
911 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs762207147 CA384506003 |
911 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs146522636 CA6531154 |
912 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6531155 rs202032840 |
912 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs749878386 CA6531153 |
913 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1231064345 CA384505954 |
914 | L>P | No |
ClinGen gnomAD |
|
CA384505942 rs1437847546 |
915 | S>C | No |
ClinGen TOPMed gnomAD |
|
rs1437847546 CA384505940 |
915 | S>F | No |
ClinGen TOPMed gnomAD |
|
rs1181029231 CA384505947 |
915 | S>P | No |
ClinGen gnomAD |
|
CA6531151 rs769445087 |
916 | R>C | No |
ClinGen ExAC gnomAD |
|
rs1211348676 CA384505931 COSM4786980 COSM1361815 |
916 | R>H | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Cosmic NCI-TCGA TOPMed gnomAD |
TCGA novel | 917 | L>I | Variant assessed as Somatic; MODERATE impact. [NCI-TCGA] | No | NCI-TCGA |
CA6531149 rs372112971 |
919 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1230353165 CA384505896 |
919 | R>Q | No |
ClinGen TOPMed gnomAD |
|
CA384505873 rs1349017600 |
920 | E>D | No |
ClinGen gnomAD |
|
rs756896746 CA6531148 |
923 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
COSM693846 COSM4860736 |
924 | P>= | Variant assessed as Somatic; LOW impact. [NCI-TCGA] | No | NCI-TCGA Cosmic |
rs149966815 CA6531147 |
924 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
No associated diseases with O95398
No regional properties for O95398
Type | Name | Position | InterPro Accession |
---|---|---|---|
No domain, repeats, and functional sites for O95398 |
Functions
Description | ||
---|---|---|
EC Number | ||
Subcellular Localization |
|
|
PANTHER Family | PTHR23113 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
PANTHER Subfamily | PTHR23113:SF24 | RAP GUANINE NUCLEOTIDE EXCHANGE FACTOR 3 |
PANTHER Protein Class |
guanyl-nucleotide exchange factor
G-protein modulator protein-binding activity modulator |
|
PANTHER Pathway Category | No pathway information available |
7 GO annotations of cellular component
Name | Definition |
---|---|
endomembrane system | A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. |
extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
filopodium | Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft. |
lamellipodium | A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments. |
membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it. |
microvillus | Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells. |
plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
3 GO annotations of molecular function
Name | Definition |
---|---|
cAMP binding | Binding to cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate). |
guanyl-nucleotide exchange factor activity | Stimulates the exchange of GDP to GTP on a signaling GTPase, changing its conformation to its active form. Guanine nucleotide exchange factors (GEFs) act by stimulating the release of guanosine diphosphate (GDP) to allow binding of guanosine triphosphate (GTP), which is more abundant in the cell under normal cellular physiological conditions. |
protein domain specific binding | Binding to a specific domain of a protein. |
18 GO annotations of biological process
Name | Definition |
---|---|
adaptive immune response | An immune response mediated by cells expressing specific receptors for antigens produced through a somatic diversification process, and allowing for an enhanced secondary response to subsequent exposures to the same antigen (immunological memory). |
angiogenesis | Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels. |
associative learning | Learning by associating a stimulus (the cause) with a particular outcome (the effect). |
cAMP-mediated signaling | Any intracellular signal transduction in which the signal is passed on within the cell via cyclic AMP (cAMP). Includes production of cAMP, and downstream effectors that further transmit the signal within the cell. |
cellular response to cAMP | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus. |
establishment of endothelial barrier | The establishment of a barrier between endothelial cell layers, such as those in the brain, lung or intestine, to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition. |
negative regulation of syncytium formation by plasma membrane fusion | Any process that decreases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. |
positive regulation of angiogenesis | Any process that activates or increases angiogenesis. |
positive regulation of GTPase activity | Any process that activates or increases the activity of a GTPase. |
positive regulation of protein export from nucleus | Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm. |
positive regulation of stress fiber assembly | Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts. |
positive regulation of syncytium formation by plasma membrane fusion | Any process that increases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. |
Rap protein signal transduction | The series of molecular signals within the cell that are mediated by a member of the Rap family of proteins switching to a GTP-bound active state. |
Ras protein signal transduction | The series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state. |
regulation of actin cytoskeleton organization | Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. |
regulation of angiogenesis | Any process that modulates the frequency, rate or extent of angiogenesis. |
regulation of phosphatidylinositol 3-kinase signaling | Any process that modulates the frequency, rate or extent of signal transduction mediated by the phosphatidylinositol 3-kinase cascade. |
signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
17 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
Q07890 | SOS2 | Son of sevenless homolog 2 | Homo sapiens (Human) | SS |
Q07889 | SOS1 | Son of sevenless homolog 1 | Homo sapiens (Human) | EV |
Q13905 | RAPGEF1 | Rap guanine nucleotide exchange factor 1 | Homo sapiens (Human) | PR |
Q8WZA2 | RAPGEF4 | Rap guanine nucleotide exchange factor 4 | Homo sapiens (Human) | SS |
Q8N431 | RASGEF1C | Ras-GEF domain-containing family member 1C | Homo sapiens (Human) | PR |
Q8N9B8 | RASGEF1A | Ras-GEF domain-containing family member 1A | Homo sapiens (Human) | PR |
Q8IZJ4 | RGL4 | Ral-GDS-related protein | Homo sapiens (Human) | PR |
Q12967 | RALGDS | Ral guanine nucleotide dissociation stimulator | Homo sapiens (Human) | PR |
O95267 | RASGRP1 | RAS guanyl-releasing protein 1 | Homo sapiens (Human) | EV |
Q8TDF6 | RASGRP4 | RAS guanyl-releasing protein 4 | Homo sapiens (Human) | SS |
Q7LDG7 | RASGRP2 | RAS guanyl-releasing protein 2 | Homo sapiens (Human) | EV SS |
Q8IV61 | RASGRP3 | Ras guanyl-releasing protein 3 | Homo sapiens (Human) | SS |
Q86X27 | RALGPS2 | Ras-specific guanine nucleotide-releasing factor RalGPS2 | Homo sapiens (Human) | PR |
Q5JS13 | RALGPS1 | Ras-specific guanine nucleotide-releasing factor RalGPS1 | Homo sapiens (Human) | PR |
Q9EQZ6 | Rapgef4 | Rap guanine nucleotide exchange factor 4 | Mus musculus (Mouse) | EV |
Q8VCC8 | Rapgef3 | Rap guanine nucleotide exchange factor 3 | Mus musculus (Mouse) | SS |
Q9Z1C8 | Rapgef3 | Rap guanine nucleotide exchange factor 3 | Rattus norvegicus (Rat) | SS |
10 | 20 | 30 | 40 | 50 | 60 |
MKVGWPGESC | WQVGLAVEDS | PALGAPRVGA | LPDVVPEGTL | LNMVLRRMHR | PRSCSYQLLL |
70 | 80 | 90 | 100 | 110 | 120 |
EHQRPSCIQG | LRWTPLTNSE | ESLDFSESLE | QASTERVLRA | GRQLHRHLLA | TCPNLIRDRK |
130 | 140 | 150 | 160 | 170 | 180 |
YHLRLYRQCC | SGRELVDGIL | ALGLGVHSRS | QVVGICQVLL | DEGALCHVKH | DWAFQDRDAQ |
190 | 200 | 210 | 220 | 230 | 240 |
FYRFPGPEPE | PVRTHEMEEE | LAEAVALLSQ | RGPDALLTVA | LRKPPGQRTD | EELDLIFEEL |
250 | 260 | 270 | 280 | 290 | 300 |
LHIKAVAHLS | NSVKRELAAV | LLFEPHSKAG | TVLFSQGDKG | TSWYIIWKGS | VNVVTHGKGL |
310 | 320 | 330 | 340 | 350 | 360 |
VTTLHEGDDF | GQLALVNDAP | RAATIILRED | NCHFLRVDKQ | DFNRIIKDVE | AKTMRLEEHG |
370 | 380 | 390 | 400 | 410 | 420 |
KVVLVLERAS | QGAGPSRPPT | PGRNRYTVMS | GTPEKILELL | LEAMGPDSSA | HDPTETFLSD |
430 | 440 | 450 | 460 | 470 | 480 |
FLLTHRVFMP | SAQLCAALLH | HFHVEPAGGS | EQERSTYVCN | KRQQILRLVS | QWVALYGSML |
490 | 500 | 510 | 520 | 530 | 540 |
HTDPVATSFL | QKLSDLVGRD | TRLSNLLREQ | WPERRRCHRL | ENGCGNASPQ | MKARNLPVWL |
550 | 560 | 570 | 580 | 590 | 600 |
PNQDEPLPGS | SCAIQVGDKV | PYDICRPDHS | VLTLQLPVTA | SVREVMAALA | QEDGWTKGQV |
610 | 620 | 630 | 640 | 650 | 660 |
LVKVNSAGDA | IGLQPDARGV | ATSLGLNERL | FVVNPQEVHE | LIPHPDQLGP | TVGSAEGLDL |
670 | 680 | 690 | 700 | 710 | 720 |
VSAKDLAGQL | TDHDWSLFNS | IHQVELIHYV | LGPQHLRDVT | TANLERFMRR | FNELQYWVAT |
730 | 740 | 750 | 760 | 770 | 780 |
ELCLCPVPGP | RAQLLRKFIK | LAAHLKEQKN | LNSFFAVMFG | LSNSAISRLA | HTWERLPHKV |
790 | 800 | 810 | 820 | 830 | 840 |
RKLYSALERL | LDPSWNHRVY | RLALAKLSPP | VIPFMPLLLK | DMTFIHEGNH | TLVENLINFE |
850 | 860 | 870 | 880 | 890 | 900 |
KMRMMARAAR | MLHHCRSHNP | VPLSPLRSRV | SHLHEDSQVA | RISTCSEQSL | STRSPASTWA |
910 | 920 | ||||
YVQQLKVIDN | QRELSRLSRE | LEP |