O75449
Gene name |
KATNA1 |
Protein name |
Katanin p60 ATPase-containing subunit A1 |
Names |
Katanin p60 subunit A1, p60 katanin |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:11104 |
EC number |
5.6.1.1: Enzymes altering polypeptide conformation or assembly |
Protein Class |
|

Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure

Activated structure

3 structures for O75449
Entry ID | Method | Resolution | Chain | Position | Source |
---|---|---|---|---|---|
5ZQL | X-ray | 301 A | A/B | 183-491 | PDB |
5ZQM | X-ray | 290 A | A | 183-489 | PDB |
AF-O75449-F1 | Predicted | AlphaFoldDB |
332 variants for O75449
Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
---|---|---|---|---|---|
COSM594664 rs1326322121 CA366010378 |
2 | S>G | lung Variant assessed as Somatic; 4.65e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
rs746380317 CA4043257 |
2 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA366010372 rs1206873372 |
3 | L>V | No |
ClinGen TOPMed |
|
CA149899281 rs1037022230 |
5 | M>L | No |
ClinGen TOPMed |
|
CA4043255 rs368939794 |
5 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA366010330 rs1280998762 |
9 | N>H | No |
ClinGen gnomAD |
|
rs771314781 CA4043254 |
9 | N>K | No |
ClinGen ExAC gnomAD |
|
CA4043253 rs747458691 |
10 | V>A | No |
ClinGen ExAC gnomAD |
|
CA149899280 rs888347343 |
14 | R>C | No |
ClinGen TOPMed gnomAD |
|
rs374517735 CA4043252 |
14 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA366010296 rs374517735 |
14 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1476785981 CA366010290 |
15 | E>G | No |
ClinGen TOPMed |
|
rs1423711156 CA366010282 |
16 | Y>C | No |
ClinGen TOPMed |
|
CA4043251 rs761698694 |
16 | Y>LRPILVCRL* | No |
ClinGen ExAC |
|
rs748303578 CA4043249 |
22 | Y>C | No |
ClinGen ExAC gnomAD |
|
CA4043248 rs778977868 |
24 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs778977868 CA149899279 |
24 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs755002877 CA4043247 |
25 | A>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 26 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs143698350 CA4043245 |
26 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA366010209 rs1582809039 |
27 | V>G | No |
ClinGen Ensembl |
|
rs750297626 CA4043243 |
28 | Y>C | No |
ClinGen ExAC gnomAD |
|
rs767351798 CA4043242 |
29 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1215702317 CA366010181 |
31 | G>V | No |
ClinGen gnomAD |
|
CA366010178 rs1278194101 |
32 | V>F | No |
ClinGen TOPMed |
|
CA366010145 rs1287851861 |
36 | M>I | No |
ClinGen TOPMed |
|
CA366010148 rs1285725039 |
36 | M>T | No |
ClinGen TOPMed gnomAD |
|
rs1223810550 CA366010139 |
37 | N>S | No |
ClinGen gnomAD |
|
TCGA novel | 37 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs774094453 CA4043240 |
38 | K>E | No |
ClinGen ExAC gnomAD |
|
CA149899278 rs774094453 |
38 | K>Q | No |
ClinGen ExAC gnomAD |
|
rs763724237 CA4043239 |
40 | L>P | No |
ClinGen ExAC gnomAD |
|
rs774844501 CA4043237 |
42 | S>L | No |
ClinGen ExAC gnomAD |
|
CA366010108 rs1321294722 |
42 | S>P | No |
ClinGen TOPMed |
|
rs1222644939 CA366010104 |
43 | V>I | No |
ClinGen TOPMed |
|
CA4043236 rs771529719 |
44 | K>E | No |
ClinGen ExAC gnomAD |
|
CA366010091 rs1293628022 |
45 | D>N | No |
ClinGen TOPMed |
|
rs1562301917 CA366010081 |
46 | T>S | No |
ClinGen Ensembl |
|
rs1420341556 CA366010020 |
54 | Q>E | No |
ClinGen gnomAD |
|
CA366012596 rs1442146865 |
60 | N>S | No |
ClinGen TOPMed gnomAD |
|
CA4043215 rs146991684 |
60 | N>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA366012585 rs1194996823 |
61 | V>M | No |
ClinGen gnomAD |
|
CA4043213 rs772456492 |
62 | E>K | No |
ClinGen ExAC gnomAD |
|
CA366012526 rs1324406204 |
65 | H>P | No |
ClinGen gnomAD |
|
rs1224001128 CA366012527 |
65 | H>Y | No |
ClinGen gnomAD |
|
CA4043211 rs201370995 |
66 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
CA149951233 rs946183329 |
68 | D>V | No |
ClinGen TOPMed gnomAD |
|
rs749402420 CA149951223 |
69 | I>S | No |
ClinGen ExAC gnomAD |
|
rs749402420 CA4043209 |
69 | I>T | No |
ClinGen ExAC gnomAD |
|
rs1345026758 CA366012478 |
70 | M>L | No |
ClinGen gnomAD |
|
CA149951205 rs141332099 |
72 | T>I | No |
ClinGen ESP |
|
CA366012437 rs1388520962 |
73 | L>P | No |
ClinGen gnomAD |
|
CA149951194 rs183436239 |
75 | S>N | No |
ClinGen 1000Genomes |
|
rs745828092 CA4043206 |
79 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA366012360 rs1297804127 |
79 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
CA366012362 rs1297804127 |
79 | D>N | No |
ClinGen TOPMed gnomAD |
|
CA4043203 rs150419039 |
85 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
TCGA novel | 86 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs949931101 CA149951171 |
88 | H>N | No |
ClinGen TOPMed |
|
rs1186722695 CA366012219 |
90 | L>F | No |
ClinGen TOPMed |
|
rs150555137 CA366012208 |
91 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs150555137 CA4043201 |
91 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA366012200 rs1193684132 |
92 | A>T | No |
ClinGen gnomAD |
|
rs975080160 CA149951160 |
93 | S>Y | No |
ClinGen TOPMed gnomAD |
|
CA149951157 rs918303162 |
94 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA4043199 rs140455659 |
95 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs758929490 CA4043198 |
96 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
CA366012138 rs1191524990 |
97 | V>D | No |
ClinGen gnomAD |
|
CA4043197 rs753323056 |
97 | V>I | No |
ClinGen ExAC gnomAD |
|
rs768069404 CA4043196 |
98 | W>* | No |
ClinGen ExAC gnomAD |
|
CA4043195 rs762301775 |
99 | S>F | No |
ClinGen ExAC gnomAD |
|
rs768841688 CA4043193 |
100 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4043194 rs774700637 |
100 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
CA149951123 rs774700637 |
100 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1469576234 CA366012096 |
101 | P>S | No |
ClinGen gnomAD |
|
rs375960214 CA4043191 |
102 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs375960214 CA4043192 |
102 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA4043190 rs770023141 |
104 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
CA149951103 rs533659192 |
106 | R>* | No |
ClinGen 1000Genomes gnomAD |
|
rs745997781 CA4043189 |
106 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA366012022 rs745997781 |
106 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
CA366012017 rs1179291154 |
107 | R>G | No |
ClinGen gnomAD |
|
CA366010868 rs775897411 |
108 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4043172 rs775897411 |
108 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs202184229 CA4043170 |
115 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs759837219 CA4043169 |
115 | R>H | No |
ClinGen ExAC gnomAD |
|
rs1245514300 CA366010817 |
116 | Q>R | No |
ClinGen gnomAD |
|
CA4043167 rs771078818 |
119 | Q>R | No |
ClinGen ExAC gnomAD |
|
rs746967618 CA4043166 |
121 | S>G | No |
ClinGen ExAC gnomAD |
|
CA149946038 rs899866821 |
122 | D>E | No |
ClinGen TOPMed |
|
rs142263647 CA4043165 |
122 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA4043164 rs772014499 |
123 | P>L | No |
ClinGen ExAC gnomAD |
|
rs1345793129 CA366010755 |
125 | S>L | No |
ClinGen TOPMed |
|
rs201942843 CA366010743 |
127 | G>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs201942843 CA4043163 |
127 | G>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
rs778764236 CA4043162 |
128 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
rs769899413 CA4043161 |
129 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
rs748881542 CA4043160 |
130 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1023782706 CA149946008 |
130 | P>S | No |
ClinGen gnomAD |
|
rs1434375435 CA366010722 |
131 | S>N | No |
ClinGen gnomAD |
|
CA4043157 rs749913542 |
134 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
TCGA novel | 134 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA4043156 rs141453341 |
135 | R>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA366010682 rs1263981056 |
137 | H>Q | No |
ClinGen TOPMed gnomAD |
|
CA4043155 rs758935014 |
138 | R>C | No |
ClinGen ExAC gnomAD |
|
CA149945936 rs751349445 |
140 | S>P | No |
ClinGen Ensembl |
|
CA366010667 rs1210829271 |
140 | S>Y | No |
ClinGen gnomAD |
|
rs998923102 CA149945933 |
143 | N>S | No |
ClinGen Ensembl |
|
rs1220994999 CA366010616 |
147 | D>E | No |
ClinGen TOPMed gnomAD |
|
rs760877623 CA4043149 |
147 | D>G | No |
ClinGen ExAC |
|
CA4043150 rs766600468 |
147 | D>Y | No |
ClinGen ExAC |
|
TCGA novel | 148 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs773321162 CA4043148 |
149 | G>R | No |
ClinGen ExAC gnomAD |
|
rs771968861 CA4043147 |
149 | G>V | No |
ClinGen ExAC gnomAD |
|
CA4043146 rs557222260 |
150 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
TCGA novel | 151 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1351280844 CA366010595 |
151 | A>T | No |
ClinGen gnomAD |
|
rs774028107 CA4043145 |
151 | A>V | No |
ClinGen ExAC gnomAD |
|
rs373230292 CA4043144 |
153 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs369384760 CA4043142 |
153 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA4043143 rs369384760 |
153 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA366010586 rs373230292 |
153 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs745424629 CA4043140 |
155 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1198824418 CA366010572 |
155 | R>H | No |
ClinGen TOPMed gnomAD |
|
CA4043139 rs780752509 |
156 | E>V | No |
ClinGen ExAC gnomAD |
|
CA366010551 rs1278949459 |
158 | K>R | No |
ClinGen Ensembl |
|
CA366010541 rs1248718852 |
159 | E>D | No |
ClinGen gnomAD |
|
CA366010535 rs1209623111 |
160 | Q>R | No |
ClinGen TOPMed gnomAD |
|
CA149945826 rs979473018 |
163 | G>* | No |
ClinGen TOPMed |
|
TCGA novel | 167 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs962738380 CA149933069 |
168 | N>K | No |
ClinGen Ensembl |
|
rs1285718620 CA366009984 |
170 | S>* | No |
ClinGen TOPMed |
|
CA4043123 rs372543973 |
172 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA366009923 rs1309583799 |
180 | N>D | No |
ClinGen gnomAD |
|
rs1348137299 CA366009913 |
181 | K>T | No |
ClinGen gnomAD |
|
rs1310930730 CA366009899 |
183 | D>H | No |
ClinGen gnomAD |
|
rs780584106 CA4043121 |
184 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
CA149932990 rs959797169 |
186 | G>E | No |
ClinGen TOPMed |
|
rs748635170 CA4043119 COSM1441115 |
186 | G>R | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
rs1359608037 CA366009858 |
189 | K>E | No |
ClinGen gnomAD |
|
rs779605721 CA4043118 |
190 | D>Y | No |
ClinGen ExAC gnomAD |
|
rs1160649817 CA366009834 |
192 | V>A | No |
ClinGen gnomAD |
|
rs755520199 CA4043116 |
192 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
rs755520199 CA366009837 |
192 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
rs754312408 CA4043115 |
193 | E>G | No |
ClinGen ExAC TOPMed |
|
rs1035885455 CA149932974 |
194 | A>D | No |
ClinGen TOPMed |
|
rs1333740043 CA366009825 |
194 | A>S | No |
ClinGen TOPMed |
|
CA4043114 rs780499671 |
196 | E>K | No |
ClinGen ExAC gnomAD |
|
CA149932940 rs970653137 |
198 | D>E | No |
ClinGen TOPMed gnomAD |
|
rs756304379 CA4043113 |
198 | D>G | No |
ClinGen ExAC gnomAD |
|
CA366009791 rs1484527024 |
199 | I>L | No |
ClinGen gnomAD |
|
TCGA novel | 199 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA366009792 rs1484527024 |
199 | I>V | No |
ClinGen gnomAD |
|
rs1562282262 CA366009786 |
200 | I>F | No |
ClinGen Ensembl |
|
rs767524484 CA4043111 |
202 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1582758195 CA366009751 |
205 | N>H | No |
ClinGen Ensembl |
|
rs761990782 CA4043110 |
205 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
CA366009742 rs1287765758 |
206 | V>A | No |
ClinGen gnomAD |
|
CA4043108 COSM1074440 rs200980886 |
207 | R>* | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
rs1358217928 CA366009736 |
207 | R>Q | No |
ClinGen gnomAD |
|
CA4043094 rs780585866 |
209 | D>N | No |
ClinGen ExAC gnomAD |
|
CA149932142 rs112384969 |
210 | D>G | No |
ClinGen gnomAD |
|
rs750719824 CA4043092 |
210 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4043093 rs750719824 |
210 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
rs781524224 CA4043091 |
211 | I>F | No |
ClinGen ExAC gnomAD |
|
rs751701073 CA4043089 |
212 | A>P | No |
ClinGen ExAC gnomAD |
|
rs764097825 CA4043088 |
214 | L>* | No |
ClinGen ExAC gnomAD |
|
rs758348801 CA4043087 |
217 | A>P | No |
ClinGen ExAC gnomAD |
|
rs764974796 CA4043085 |
218 | K>N | No |
ClinGen ExAC gnomAD |
|
rs752584493 CA4043086 |
218 | K>T | No |
ClinGen ExAC gnomAD |
|
rs1330377587 CA366009393 |
222 | K>R | No |
ClinGen TOPMed |
|
COSM1169062 CA366009375 rs1193787084 |
225 | V>I | pancreas [Cosmic] | No |
ClinGen cosmic curated gnomAD |
CA4043082 rs372332577 |
229 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs1034747338 CA149932066 |
229 | M>T | No |
ClinGen TOPMed |
|
CA4043081 rs372332577 |
229 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA149932064 rs1015844305 |
231 | M>V | No |
ClinGen TOPMed gnomAD |
|
rs1192566750 CA366009323 |
232 | P>L | No |
ClinGen gnomAD |
|
TCGA novel | 233 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1319952238 CA366009278 |
238 | I>S | No |
ClinGen gnomAD |
|
CA366009282 rs1562281511 |
238 | I>V | No |
ClinGen Ensembl |
|
rs267600852 CA149932033 COSM36637 |
241 | P>L | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
CA149932053 rs267600853 |
241 | P>S | No |
ClinGen Ensembl |
|
CA366009255 rs1219377766 |
242 | W>* | No |
ClinGen gnomAD |
|
rs772959973 CA4043061 |
248 | V>I | No |
ClinGen ExAC gnomAD |
|
CA4043059 rs761454896 |
249 | G>S | No |
ClinGen ExAC gnomAD |
|
rs770397288 CA4043058 |
253 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs770397288 CA366009172 |
253 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4043057 rs770397288 |
253 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
rs767744945 CA149930814 |
256 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
rs1251538246 CA366009147 |
257 | L>H | No |
ClinGen TOPMed |
|
rs778013011 CA4043052 |
258 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4043051 rs758597565 |
259 | A>T | No |
ClinGen ExAC |
|
rs1163542888 CA366009128 |
261 | A>T | No |
ClinGen gnomAD |
|
rs879907212 CA149930789 |
263 | A>S | No |
ClinGen gnomAD |
|
rs368136770 CA4043049 |
264 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA366009097 rs1440631568 |
266 | C>R | No |
ClinGen gnomAD |
|
rs1258126357 CA366009095 |
266 | C>Y | No |
ClinGen gnomAD |
|
rs1202300890 CA366009088 |
267 | K>Q | No |
ClinGen gnomAD |
|
TCGA novel | 269 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
TCGA novel | 270 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs778857317 CA4043048 |
272 | N>S | No |
ClinGen ExAC gnomAD |
|
CA4043047 rs754949373 |
273 | V>F | No |
ClinGen ExAC gnomAD |
|
rs1356052799 CA366009036 |
275 | S>T | No |
ClinGen TOPMed gnomAD |
|
CA4043045 rs753668307 |
277 | T>P | No |
ClinGen ExAC gnomAD |
|
rs966065974 CA149930740 |
278 | L>S | No |
ClinGen Ensembl |
|
CA366009010 rs1418156313 |
279 | T>N | No |
ClinGen gnomAD |
|
TCGA novel | 286 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA366008940 rs1250190442 |
289 | L>F | No |
ClinGen gnomAD |
|
rs756012508 CA4043042 |
291 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
rs756012508 CA366008930 |
291 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
rs534743192 CA4043041 |
291 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA366008925 rs1359341099 |
292 | L>F | No |
ClinGen gnomAD |
|
TCGA novel | 293 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1304688768 CA366008871 COSM1211347 |
298 | R>* | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
rs748254559 CA4043028 COSM3765239 |
298 | R>Q | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs144497418 CA4043026 |
300 | Y>F | No |
ClinGen ExAC gnomAD |
|
rs1403466175 CA366008849 |
301 | S>F | No |
ClinGen gnomAD |
|
rs1163565805 CA366008842 |
302 | P>L | No |
ClinGen gnomAD |
|
CA4043022 rs750305644 |
305 | I>T | No |
ClinGen ExAC gnomAD |
|
CA4043023 rs756103424 |
305 | I>V | No |
ClinGen ExAC gnomAD |
|
TCGA novel | 311 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1198418166 CA366008745 |
316 | R>C | No |
ClinGen TOPMed gnomAD |
|
rs756980278 COSM1441112 CA4043018 |
316 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
CA4043017 rs751127064 |
317 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
rs149685408 CA4043016 |
317 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed |
rs762414634 CA4043015 |
318 | G>V | No |
ClinGen ExAC gnomAD |
|
CA366008702 rs1256694136 |
323 | H>R | No |
ClinGen gnomAD |
|
TCGA novel | 326 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA366008667 rs1231069073 |
328 | R>K | No |
ClinGen TOPMed |
|
rs766930372 CA4043013 |
331 | A>S | No |
ClinGen ExAC gnomAD |
|
rs761166751 CA4043012 |
331 | A>V | No |
ClinGen ExAC gnomAD |
|
rs772366653 CA4043010 |
335 | V>L | No |
ClinGen ExAC gnomAD |
|
rs749132055 CA4042990 |
341 | G>A | No |
ClinGen ExAC gnomAD |
|
rs1207474735 CA366008564 |
342 | G>D | No |
ClinGen gnomAD |
|
CA366008567 rs1432441267 |
342 | G>S | No |
ClinGen TOPMed |
|
CA4042989 rs73781249 |
343 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA366008533 rs1379298867 |
347 | D>N | No |
ClinGen TOPMed |
|
rs764285930 CA4042988 |
348 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
rs116762085 CA4042987 |
349 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA366008509 rs1240550719 |
350 | S>F | No |
ClinGen gnomAD |
|
CA366008481 rs1254028714 |
354 | M>T | No |
ClinGen gnomAD |
|
rs1282332770 CA366008484 |
354 | M>V | No |
ClinGen gnomAD |
|
rs370661501 CA149927657 |
358 | A>T | No |
ClinGen Ensembl |
|
CA366008427 rs1445999456 |
362 | P>L | No |
ClinGen gnomAD |
|
rs1193519113 CA366008430 |
362 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
CA149927650 rs911199528 |
364 | D>H | No |
ClinGen Ensembl |
|
rs771044135 CA4042985 |
365 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1431074270 CA366008401 |
366 | D>G | No |
ClinGen TOPMed |
|
rs776751803 CA4042983 |
370 | R>G | No |
ClinGen ExAC gnomAD |
|
COSM1672827 rs1358813969 CA366008368 |
371 | R>* | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
CA366008367 rs1177906894 |
371 | R>Q | No |
ClinGen Ensembl |
|
TCGA novel | 372 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs770883758 CA4042981 |
376 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA366008333 rs1180618309 |
376 | R>Q | No |
ClinGen gnomAD |
|
rs377721507 CA4042979 |
378 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA366008314 rs1205837271 |
379 | I>T | No |
ClinGen TOPMed gnomAD |
|
rs1257612492 CA366008317 |
379 | I>V | No |
ClinGen gnomAD |
|
CA366008296 rs1582747705 |
382 | P>S | No |
ClinGen Ensembl |
|
COSM1074436 CA4042960 rs770844527 |
390 | L>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs372912527 CA4042958 |
392 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
CA4042957 rs143398283 |
392 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
rs570083415 CA149927307 |
393 | I>V | No |
ClinGen gnomAD |
|
rs778583263 CA4042955 |
396 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
rs768282143 CA4042954 |
396 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4042951 rs757715709 |
402 | D>A | No |
ClinGen ExAC gnomAD |
|
CA366008150 rs1174632801 |
402 | D>E | No |
ClinGen TOPMed |
|
rs1463660721 CA366008148 |
403 | D>H | No |
ClinGen gnomAD |
|
rs778027761 CA4042948 |
405 | D>A | No |
ClinGen ExAC gnomAD |
|
CA4042947 rs758877724 |
406 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
CA149927242 rs899212534 |
407 | A>P | No |
ClinGen TOPMed |
|
CA366008115 rs1192759489 |
408 | S>N | No |
ClinGen gnomAD |
|
CA4042946 rs375557289 |
409 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA366008062 rs1348879722 |
415 | G>D | No |
ClinGen TOPMed |
|
rs759837333 CA4042944 |
416 | Y>F | No |
ClinGen ExAC gnomAD |
|
rs753867329 CA4042943 |
418 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
rs766424563 CA4042942 |
419 | A>V | No |
ClinGen ExAC gnomAD |
|
rs773163446 CA4042940 |
421 | I>V | No |
ClinGen ExAC gnomAD |
|
CA149927209 rs568916323 |
422 | T>I | No |
ClinGen 1000Genomes |
|
CA366008013 rs1237009181 |
423 | N>T | No |
ClinGen TOPMed gnomAD |
|
CA366008009 rs1217245379 |
424 | V>M | No |
ClinGen TOPMed |
|
TCGA novel | 426 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs766402765 CA4042922 |
427 | D>G | No |
ClinGen ExAC gnomAD |
|
CA4042921 rs147429157 |
428 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA149925831 rs147429157 |
428 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
rs200653967 CA4042919 |
430 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1254177437 CA366007941 |
431 | M>I | No |
ClinGen gnomAD |
|
CA366007943 rs1423377228 |
431 | M>T | No |
ClinGen gnomAD |
|
CA4042917 rs774145171 |
433 | M>V | No |
ClinGen ExAC gnomAD |
|
CA366007913 rs1208305748 |
435 | R>K | No |
ClinGen TOPMed |
|
COSM740652 CA4042916 rs768388071 |
436 | R>C | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
rs762541385 CA4042915 |
436 | R>H | No |
ClinGen ExAC gnomAD |
|
CA4042914 rs775246631 |
437 | I>T | No |
ClinGen ExAC gnomAD |
|
rs1353287293 CA366007905 |
437 | I>V | No |
ClinGen TOPMed gnomAD |
|
rs1485550530 CA366007894 |
438 | E>D | No |
ClinGen TOPMed |
|
CA366007888 rs1339152336 |
439 | G>D | No |
ClinGen gnomAD |
|
rs776004154 CA4042911 |
443 | E>K | No |
ClinGen ExAC gnomAD |
|
COSM1074434 rs375376381 CA4042910 |
446 | R>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
CA4042909 rs748608795 |
446 | R>Q | No |
ClinGen ExAC gnomAD |
|
CA366007780 rs1419881008 |
451 | E>A | No |
ClinGen gnomAD |
|
CA4042907 rs755355634 |
451 | E>Q | No |
ClinGen ExAC gnomAD |
|
rs1158971720 CA366007770 |
452 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
CA366007763 rs1167252715 |
452 | E>D | No |
ClinGen gnomAD |
|
TCGA novel | 453 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
rs1262830876 CA366007730 |
455 | M>V | No |
ClinGen gnomAD |
|
rs1191766458 CA366007699 |
457 | T>A | No |
ClinGen gnomAD |
|
TCGA novel | 457 | T>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA366007657 rs1448901969 |
459 | M>T | No |
ClinGen gnomAD |
|
rs1213236452 CA366007664 |
459 | M>V | No |
ClinGen TOPMed gnomAD |
|
rs142811934 CA366007581 |
463 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs142811934 CA4042904 |
463 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA149925744 rs148234938 |
464 | M>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs148234938 CA4042903 |
464 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA366007547 rs1231855341 |
464 | M>V | No |
ClinGen gnomAD |
|
CA4042902 rs143717160 |
465 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
rs757204050 CA4042901 |
467 | K>E | No |
ClinGen ExAC gnomAD |
|
CA149925728 rs931127584 |
473 | V>M | No |
ClinGen Ensembl |
|
rs1275971142 CA366007342 |
474 | S>C | No |
ClinGen TOPMed gnomAD |
|
rs763985367 CA4042899 |
479 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
CA4042898 rs762853491 |
479 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
CA366007235 rs775137029 COSM3662194 |
480 | R>S | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
CA4042896 rs371724006 |
481 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs776299358 CA4042894 |
482 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
rs1326497547 CA366007185 |
483 | K>N | No |
ClinGen gnomAD |
|
TCGA novel | 484 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
CA366007172 rs1231348731 |
484 | W>S | No |
ClinGen TOPMed |
|
CA4042893 rs199531016 |
485 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA366007145 rs1423028217 |
486 | F>L | No |
ClinGen gnomAD |
|
rs148963342 CA4042892 |
486 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA366007138 rs1166168345 |
486 | F>S | No |
ClinGen gnomAD |
|
rs775039492 CA4042891 |
487 | E>Q | No |
ClinGen ExAC gnomAD |
|
rs1212102453 CA366007099 |
488 | F>L | No |
ClinGen TOPMed |
|
CA4042890 rs769265298 |
488 | F>V | No |
ClinGen ExAC gnomAD |
No associated diseases with O75449
No regional properties for O75449
Type | Name | Position | InterPro Accession |
---|---|---|---|
No domain, repeats, and functional sites for O75449 |
Functions
Description | ||
---|---|---|
EC Number | 5.6.1.1 | Enzymes altering polypeptide conformation or assembly |
Subcellular Localization |
|
|
PANTHER Family | ||
PANTHER Subfamily | ||
PANTHER Protein Class | ||
PANTHER Pathway Category | No pathway information available |
9 GO annotations of cellular component
Name | Definition |
---|---|
centrosome | A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle. |
cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
katanin complex | A complex possessing an activity that couples ATP hydrolysis to the severing of microtubules; usually a heterodimer comprising a catalytic subunit (often 60kDa) and a regulatory subunit (often 80 kDa). |
microtubule | Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle. |
microtubule cytoskeleton | The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins. |
midbody | A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis. |
mitotic spindle pole | Either of the ends of a mitotic spindle, a spindle that forms as part of mitosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules. |
spindle | The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart. |
spindle pole | Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules. |
6 GO annotations of molecular function
Name | Definition |
---|---|
ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
isomerase activity | Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5. |
microtubule binding | Binding to a microtubule, a filament composed of tubulin monomers. |
microtubule severing ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP. |
protein heterodimerization activity | Binding to a nonidentical protein to form a heterodimer. |
4 GO annotations of biological process
Name | Definition |
---|---|
cell cycle | The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. |
cell division | The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. |
cytoplasmic microtubule organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell. |
microtubule severing | The process in which a microtubule is broken down into smaller segments. Severing enzymes remove dimers from the middle of the filament to create new ends, unlike depolymerizing kinesins that use ATP to uncap microtubules at their ends. |
9 homologous proteins in AiPD
UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
---|---|---|---|---|
O75351 | VPS4B | Vacuolar protein sorting-associated protein 4B | Homo sapiens (Human) | PR |
Q9UN37 | VPS4A | Vacuolar protein sorting-associated protein 4A | Homo sapiens (Human) | EV |
Q9UBP0 | SPAST | Spastin | Homo sapiens (Human) | PR |
A6NCM1 | IQCA1L | IQ and AAA domain-containing protein 1-like | Homo sapiens (Human) | PR |
Q86XH1 | IQCA1 | Dynein regulatory complex protein 11 | Homo sapiens (Human) | PR |
Q6PIW4 | FIGNL1 | Fidgetin-like protein 1 | Homo sapiens (Human) | PR |
Q8K0T4 | Katnal1 | Katanin p60 ATPase-containing subunit A-like 1 | Mus musculus (Mouse) | PR |
A0JMA9 | katnal2 | Katanin p60 ATPase-containing subunit A-like 2 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
Q0IIR9 | katna1 | Katanin p60 ATPase-containing subunit A1 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
10 | 20 | 30 | 40 | 50 | 60 |
MSLLMISENV | KLAREYALLG | NYDSAMVYYQ | GVLDQMNKYL | YSVKDTYLQQ | KWQQVWQEIN |
70 | 80 | 90 | 100 | 110 | 120 |
VEAKHVKDIM | KTLESFKLDS | TPLKAAQHDL | PASEGEVWSM | PVPVERRPSP | GPRKRQSSQY |
130 | 140 | 150 | 160 | 170 | 180 |
SDPKSHGNRP | STTVRVHRSS | AQNVHNDRGK | AVRCREKKEQ | NKGREEKNKS | PAAVTEPETN |
190 | 200 | 210 | 220 | 230 | 240 |
KFDSTGYDKD | LVEALERDII | SQNPNVRWDD | IADLVEAKKL | LKEAVVLPMW | MPEFFKGIRR |
250 | 260 | 270 | 280 | 290 | 300 |
PWKGVLMVGP | PGTGKTLLAK | AVATECKTTF | FNVSSSTLTS | KYRGESEKLV | RLLFEMARFY |
310 | 320 | 330 | 340 | 350 | 360 |
SPATIFIDEI | DSICSRRGTS | EEHEASRRVK | AELLVQMDGV | GGTSENDDPS | KMVMVLAATN |
370 | 380 | 390 | 400 | 410 | 420 |
FPWDIDEALR | RRLEKRIYIP | LPSAKGREEL | LRISLRELEL | ADDVDLASIA | ENMEGYSGAD |
430 | 440 | 450 | 460 | 470 | 480 |
ITNVCRDASL | MAMRRRIEGL | TPEEIRNLSK | EEMHMPTTME | DFEMALKKVS | KSVSAADIER |
490 | |||||
YEKWIFEFGS | C |