Descriptions

Phospholipase C-β proteins form a highly conserved enzyme family that hydrolyzes phosphatidylinositol 4,5-bisphosphate (PIP2) into the second messengers inositol 1,4,5-triphosphate (IP3) and diacylglycerol, which mobilize intracellular calcium and stimulate the activity of protein kinase C. PLCβ isoforms are activated through direct interactions with heterotrimeric G proteins of the Gαq family, Gβγ heterodimers and small GTPases such as Rac1. PLCβ proteins have a highly conserved catalytic core comprised of an N-terminal pleckstrin homology (PH) domain, followed by four EF hand domains, a triose phosphate isomerase (TIM) barrel-like catalytic domain split into X and Y halves by a variable linker (XY-linker), and a C2 domain. In the basal state, the Hα2’ helix packs against a highly conserved, hydrophobic cleft formed between the TIM barrel and C2 domain of the catalytic core, in close proximity to the active site and X-Y linker. Since the intermolecular interaction of the Hα1-Hα2 module with Gαq and the intramolecular interaction of Hα2′ with the catalytic core of PLCβ3 are competitive, disruption of the Hα2′-catalytic core interface enhances the affinity of Gαq for PLCβ3. In addition, deletion of the XY-linker enhances basal activity of the enzyme. Upon activation, Gαq-GTP directly binds the helix-turn-helix of PLCβ and reorients it away from membranes to relieve this component of steric occlusion of the lipase. Gαq simultaneously positions the catalytic core of PLCβ at the membrane interface, leading to repulsion of the XY-linker and opening the active site for catalysis. Activators of PLCβ isozymes use the membrane as a conduit to allosterically enhance the phospholipase activity of these enzymes.

Autoinhibitory domains (AIDs)

Target domain

879-887 (Cleft between the TIM barrel and C2 domains of the catalytic core)

Relief mechanism

Partner binding

Assay

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

1 structures for G5EBH0

Entry ID Method Resolution Chain Position Source
AF-G5EBH0-F1 Predicted AlphaFoldDB

No variants for G5EBH0

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for G5EBH0

No associated diseases with G5EBH0

3 regional properties for G5EBH0

Type Name Position InterPro Accession
domain Cation-transporting P-type ATPase, N-terminal 13 - 85 IPR004014
ptm P-type ATPase, phosphorylation site 329 - 335 IPR018303
domain P-type ATPase, haloacid dehalogenase domain 309 - 637 IPR044492

Functions

Description
EC Number 3.1.4.11 Phosphoric diester hydrolases
Subcellular Localization
  • Perikaryon
  • Cell projection, axon
  • Synapse
  • Cell junction, adherens junction
  • Present in neuronal cell somas and axon processes of the nerve ring in head ganglia
  • Present in the adherens junction of intestinal cells
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

5 GO annotations of cellular component

Name Definition
adherens junction A cell-cell junction composed of the epithelial cadherin-catenin complex. The epithelial cadherins, or E-cadherins, of each interacting cell extend through the plasma membrane into the extracellular space and bind to each other. The E-cadherins bind to catenins on the cytoplasmic side of the membrane, where the E-cadherin-catenin complex binds to cytoskeletal components and regulatory and signaling molecules.
axon The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
perikaryon The portion of the cell soma (neuronal cell body) that excludes the nucleus.
plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
synapse The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.

2 GO annotations of molecular function

Name Definition
calcium ion binding Binding to a calcium ion (Ca2+).
phosphatidylinositol phospholipase C activity Catalysis of the reaction

14 GO annotations of biological process

Name Definition
chemotaxis The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).
dopamine receptor signaling pathway The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.
lipid catabolic process The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
phosphatidylinositol metabolic process The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid in which a sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.
phosphatidylinositol-mediated signaling The series of molecular signals in which a cell uses a phosphatidylinositol-mediated signaling to convert a signal into a response. Phosphatidylinositols include phosphatidylinositol (PtdIns) and its phosphorylated derivatives.
positive regulation of acetylcholine secretion, neurotransmission Any process that activates or increases the frequency, rate or extent of the regulated release of acetylcholine.
positive regulation of axon regeneration Any process that activates, maintains or increases the rate of axon regeneration.
positive regulation of locomotion Any process that activates or increases the frequency, rate or extent of locomotion of a cell or organism.
protein localization to synapse Any process in which a protein is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.
regulation of egg-laying behavior Any process that modulates the frequency, rate or extent of the deposition of eggs, either fertilized or not, upon a surface or into a medium.
regulation of locomotion Any process that modulates the frequency, rate or extent of locomotion of a cell or organism.
regulation of nematode pharyngeal pumping Any process that modulates the contraction and relaxation movements of the pharyngeal muscle that mediates feeding in nematodes.
release of sequestered calcium ion into cytosol The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the cytosolic compartment.
thermotaxis The directed movement of a motile cell or organism in response to a temperature gradient. Movement may be towards either a higher or lower temperature.

18 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
P32383 PLC1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase 1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) PR
P10894 PLCB1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 Bos taurus (Bovine) SS
Q00722 PLCB2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 Homo sapiens (Human) EV
Q9NQ66 PLCB1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 Homo sapiens (Human) EV
Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 Homo sapiens (Human) EV
Q15147 PLCB4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 Homo sapiens (Human) PR
P51432 Plcb3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 Mus musculus (Mouse) SS
A3KGF7 Plcb2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 Mus musculus (Mouse) PR
Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 Mus musculus (Mouse) SS
P10687 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 Rattus norvegicus (Rat) SS
Q99JE6 Plcb3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 Rattus norvegicus (Rat) SS
Q8GV43 PLC6 Phosphoinositide phospholipase C 6 Arabidopsis thaliana (Mouse-ear cress) PR
Q6NMA7 PLC9 Phosphoinositide phospholipase C 9 Arabidopsis thaliana (Mouse-ear cress) PR
Q9STZ3 PLC8 Phosphoinositide phospholipase C 8 Arabidopsis thaliana (Mouse-ear cress) PR
Q56W08 PLC3 Phosphoinositide phospholipase C 3 Arabidopsis thaliana (Mouse-ear cress) PR
Q39032 PLC1 Phosphoinositide phospholipase C 1 Arabidopsis thaliana (Mouse-ear cress) PR
Q944C2 PLC5 Phosphoinositide phospholipase C 5 Arabidopsis thaliana (Mouse-ear cress) PR
Q944C1 PLC4 Phosphoinositide phospholipase C 4 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MAKEFQFNWK PTIIPELLHG SVFDRYDDES TCLELNAQVR IDENGFFLRW LIEGKDAVVL
70 80 90 100 110 120
DMGQIWEART GGLPKDGRIM FELEQRGASE TIAERTIWIT HGQDLVNVQS FFLVAESVEL
130 140 150 160 170 180
AKTCRAGIND ILKSSRIRHV CPTTQLMKYH TWLTMNVNER RKIPIKLIIK TFSSGKPEKM
190 200 210 220 230 240
VQKCLNDLGL GGDKYTPARV INRSMGKKFR NFYKCSRGRK RKEREELDVD ILTFEKFQRL
250 260 270 280 290 300
YNKICPRTEV QELFVKLSGQ KEYLTKERLI NFLNEEQRDP RLNEILFPFF DSQRIVALLK
310 320 330 340 350 360
KHENDIKYQE DGKMSGDGFL RFLMSDENPP VFLDRIEMFM DMDQPLCHYY INSSHNTYLT
370 380 390 400 410 420
GRQYGGKSSS EIYRQVLLSG CRCIELDCWD GTGENKGEPI ITHGKAMCTD VFFKDVLVQI
430 440 450 460 470 480
RDTAFARSDF PVVLSFENHC SKSNQLKMAK YCMDIFGDML LSKPFEDAPL DPGVSLPSPN
490 500 510 520 530 540
RLRKKILIKN KRLKTDIERH QLDQFLREGK LDEEDELNET PEVVGEDSVS PRSGGSGGTG
550 560 570 580 590 600
APEEVDDDTS DDDDDPSVQT SLNVMRTIPT VNTTSNNGSN RSARSSLDTP SPSGGSLMVP
610 620 630 640 650 660
DRATSTATSI KNAVLARSPN FSSLRQKLSF KRRQSPLAGD QRAHPEVEQP VSSSSPATPS
670 680 690 700 710 720
ISGPPPCATS SGSTSSITIT TTGCSTSSSG PSKHILGGEM PAKENDEAHP ELKQNFIAKN
730 740 750 760 770 780
LKGFGFSKKQ PVLTKEEEER IFAEYHYTGA TTNIHPLLSS LVNYTHPVKF SGFDVAEANN
790 800 810 820 830 840
LHFHMSSFSE STGLGYLKQS APEFVNYNKR QSSRIYPKGA RVDSSNFLPQ IFWNAGCQMV
850 860 870 880 890 900
SLNFQTPDVY MQLNMGKFEY NGGSGYLLKP DFLRRPDRTF DPFSESPVDG VIAAHCSVRV
910 920 930 940 950 960
ISGQFLSDRK IGTYVEVEMY GLPTDTIRKE HKTKVIPGNG LNPVYNEDPF VFRKVVLPEL
970 980 990 1000 1010 1020
AVLRFAVYDE NGKQLGQRIL PLDGLQAGYR HISLRSDTNQ SFILSPVLFV QIVIKTYVPD
1030 1040 1050 1060 1070 1080
ELSGLVDALA DPRAFLSEQK KRQEALAHMG VDDSDIPDVP NTRNMALRHV KQPPRQNGSS
1090 1100 1110 1120 1130 1140
ADLLANNGQT GSARGDQTSS MASSTIRSPN EQPQPVAVDK FKVDPIEVDD LRRDKAFAKL
1150 1160 1170 1180 1190 1200
LKRFQKELDD LRKKHQKQRD SIQKQQPARR RNSSIAWIQT NVDKLITNNR RSTKKEKGSR
1210 1220 1230 1240 1250 1260
RSLTASVSSG CGSASGTVTV SVCSPSGASC SGYSTGGPST PVACNSDGTG SPATIGSPVP
1270 1280 1290 1300 1310 1320
QDLVNNDRVR SLVNTQTGEW SAMVRRHDEE EFELKKVQLK EQFDLLRKLM SEAQKNQMLA
1330 1340 1350 1360 1370 1380
LKLRLEAEGK DLKQTQTKKS MEDAKVIQLD KGIKTKAERD RRVKELNEKN LKMFVEERKR
1390 1400 1410 1420 1430
LAMKAQKHEE QLTKRHLDQL EQLDKDFHKA LDAEVGNYKE EQLAAQPTSV V