Descriptions

PYPAF1 (PYRIN-containing Apaf1-like protein 1) is a novel PYRIN-containing signaling protein that belongs to the nucleotide-binding site/leucine-rich repeat (NBS/LRR) family of signaling proteins. C-terminal leucine-rich repeats (LRRs) may function as a negative regulator of PYPAF1 activity. PYPAF1 and ASC function to regulate the activation of NF-B.

Autoinhibitory domains (AIDs)

Target domain

4-90 (PYRIN domain)

Relief mechanism

Partner binding

Assay

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

1 structures for E9Q5R7

Entry ID Method Resolution Chain Position Source
AF-E9Q5R7-F1 Predicted AlphaFoldDB

54 variants for E9Q5R7

Variant ID(s) Position Change Description Diseaes Association Provenance
rs3545489128 4 S>A No EVA
rs3397187666 35 A>P No EVA
rs3388862134 68 E>K No EVA
rs3388870899 90 Q>* No EVA
rs3388873315 95 V>M No EVA
rs3545489008 179 V>I No EVA
rs3397629220 218 A>P No EVA
rs3545106164 227 A>S No EVA
rs3545389387 278 S>F No EVA
rs3545105772 289 L>P No EVA
rs3388856200 310 W>S No EVA
rs3545256207 329 R>Q No EVA
rs3545107434 352 G>S No EVA
rs3388846910 354 L>I No EVA
rs3388853605 396 P>T No EVA
rs3388870715 420 S>N No EVA
rs3388856169 421 G>W No EVA
rs3545233452 456 A>G No EVA
rs3545097310 529 N>H No EVA
rs3545228378 537 A>V No EVA
rs3406028603 553 V>G No EVA
rs3545104997 635 S>A No EVA
rs3545133910 678 Q>H No EVA
rs3388862142 688 N>D No EVA
rs3397563838 689 M>L No EVA
rs3545233918 702 V>I No EVA
rs3388856156 705 N>S No EVA
rs3388856116 713 L>S No EVA
rs3397592893 744 R>I No EVA
rs3388873404 764 N>T No EVA
rs3397640762 772 D>G No EVA
rs3397573097 781 E>A No EVA
rs3397592920 867 E>K No EVA
rs3388870891 877 Q>H No EVA
rs3388865352 894 V>L No EVA
rs3545389665 902 S>R No EVA
rs3388856211 922 A>E No EVA
rs3388853533 924 V>A No EVA
rs3545196964 925 G>E No EVA
rs3388846949 928 S>G No EVA
rs3545300941 934 T>K No EVA
rs3397573108 955 G>E No EVA
rs3397629250 956 E>A No EVA
rs3397744363 959 R>G No EVA
rs3397182873 959 R>M No EVA
rs3412997737 960 H>P No EVA
rs3397573012 962 T>A No EVA
rs3397640845 963 C>F No EVA
rs3397563856 972 N>S No EVA
rs3388875207 1032 L>M No EVA
rs3397501776 1034 K>R No EVA
rs3412946427 1050 L>P No EVA
rs3388869595 1053 G>E* No EVA
rs3388856149 1055 C>G No EVA

No associated diseases with E9Q5R7

10 regional properties for E9Q5R7

Type Name Position InterPro Accession
repeat Leucine-rich repeat 762 - 784 IPR001611-1
repeat Leucine-rich repeat 818 - 841 IPR001611-2
repeat Leucine-rich repeat 876 - 898 IPR001611-3
repeat Leucine-rich repeat 932 - 954 IPR001611-4
repeat Leucine-rich repeat 990 - 1008 IPR001611-5
domain DAPIN domain 1 - 95 IPR004020
domain NACHT nucleoside triphosphatase 211 - 528 IPR007111
domain NACHT-associated domain 128 - 201 IPR029495
domain NOD1/2, winged helix domain 460 - 512 IPR041075
domain NACHT, LRR and PYD domains-containing protein, helical domain HD2 514 - 621 IPR041267

Functions

Description
EC Number
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

2 GO annotations of molecular function

Name Definition
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
protein-macromolecule adaptor activity The binding activity of a protein that brings together two or more macromolecules in contact, permitting those molecules to function in a coordinated way. The adaptor can bring together two proteins, or a protein and another macromolecule such as a lipid or a nucleic acid.

14 GO annotations of biological process

Name Definition
cellular response to cytokine stimulus Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.
dendritic cell migration The movement of a dendritic cell within or between different tissues and organs of the body.
ERK1 and ERK2 cascade An intracellular protein kinase cascade containing at least ERK1 or ERK2 (MAPKs), a MEK (a MAPKK) and a MAP3K. The cascade may involve 4 different kinases, as it can also contain an additional tier
negative regulation of canonical NF-kappaB signal transduction Any process that stops, prevents, or reduces the frequency, rate or extent of -kappaB kinase/NF-kappaB signaling.
negative regulation of ERK1 and ERK2 cascade Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.
negative regulation of inflammatory response Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response.
negative regulation of interleukin-1 production Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 production.
negative regulation of interleukin-6 production Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production.
negative regulation of non-canonical NF-kappaB signal transduction Any process that stops, prevents or reduces the frequency, rate or extent of NIK/NF-kappaB signaling.
negative regulation of protein autophosphorylation Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues.
negative regulation of Toll signaling pathway Any process that stops, prevents, or reduces the frequency, rate or extent of the Tl signaling pathway.
positive regulation of MHC class I biosynthetic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I.
positive regulation of non-canonical NF-kappaB signal transduction Any process that activates or increases the frequency, rate or extent of NIK/NF-kappaB signaling.
regulation of canonical NF-kappaB signal transduction Any process that modulates I-kappaB kinase/NF-kappaB signaling.

8 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
A6QLE5 NLRP3 NACHT, LRR and PYD domains-containing protein 3 Bos taurus (Bovine) SS
Q96P20 NLRP3 NACHT, LRR and PYD domains-containing protein 3 Homo sapiens (Human) EV
P59046 NLRP12 NACHT, LRR and PYD domains-containing protein 12 Homo sapiens (Human) SS
Q66X01 Nlrp9c NACHT, LRR and PYD domains-containing protein 9C Mus musculus (Mouse) PR
Q8CCN1 Nlrp10 NACHT, LRR and PYD domains-containing protein 10 Mus musculus (Mouse) PR
Q8R4B8 Nlrp3 NACHT, LRR and PYD domains-containing protein 3 Mus musculus (Mouse) SS
D4A523 Nlrp3 NACHT, LRR and PYD domains-containing protein 3 Rattus norvegicus (Rat) SS
B0FPE9 NLRP3 NACHT, LRR and PYD domains-containing protein 3 Macaca mulatta (Rhesus macaque) SS
10 20 30 40 50 60
MLPSTARDGL YRLSTYLEEL EAGELKKFKL FLGIAEDLSQ DKIPWGRMEK AGPLEMAQLM
70 80 90 100 110 120
VAHMGTREAW LLALSTFQRI HRKDLWERGQ GEDLVRVTPN NGLCLFESQS ACPLDVSPNA
130 140 150 160 170 180
PRKDLQTTYK DYVRRKFQLM EDRNARLGEC VNLSNRYTRL LLVKEHSNPI WTQQKFVDVE
190 200 210 220 230 240
WERSRTRRHQ TSPIQMETLF EPDEERPEPP HTVVLQGAAG MGKSMLAHKV MLDWADGRLF
250 260 270 280 290 300
QGRFDYVFYI SCRELNRSHT QCSVQDLISS CWPERGISLE DLMQAPDRLL FIIDGFDKLH
310 320 330 340 350 360
PSFHDAQGPW CLCWEEKQPT EVLLGSLIRR LLLPQVSLLI TTRPCALEKL HGLLEHPRHV
370 380 390 400 410 420
EILGFSEEAR KEYFYRYFHN TGQASRVLSF LMDYEPLFTM CFVPMVSWVV CTCLKQQLES
430 440 450 460 470 480
GELLRQTPRT TTAVYMFYLL SLMQPKPGTP TFKVPANQRG LVSLAAEGLW NQKILFDEQD
490 500 510 520 530 540
LGKHGLDGAD VSTFLNVNIF QKGIKCEKFY SFIHLSFQEF FAAMYCALNG REAVRRALAE
550 560 570 580 590 600
YGFSERNFLA LTVHFLFGLL NEEMRCYLER NLGWSISPQV KEEVLAWIQN KAGSEGSTLQ
610 620 630 640 650 660
HGSLELLSCL YEVQEEDFIQ QALSHFQVVV VRSISTKMEH MVCSFCARYC RSTEVLHLHG
670 680 690 700 710 720
SAYSTGMEDD PPEPSGVQTQ STYLQERNML PDVYSAYLSA AVCTNSNLIE LALYRNALGS
730 740 750 760 770 780
QGVRLLCQGL RHASCKLQNL RLKRCQISGS ACQDLAAAVI ANRNLIRLDL SDNSIGVPGL
790 800 810 820 830 840
ELLCEGLQHP RCRLQMIQLR KCLLEAAAGR SLASVLSNNS YLVELDLTGN PLEDSGLKLL
850 860 870 880 890 900
CQGLRHPVCR LRTLWLKICH LGQASCEDLA STLKMNQSLL ELDLGLNDLG DSGVLLLCEG
910 920 930 940 950 960
LSHPDCKLQT LRLGICRLGS VACVGIASVL QVNTCLQELD LSFNDLGDRG LQLLGEGLRH
970 980 990 1000 1010 1020
QTCRLQKLWL DNCGLTSKAC EDLSSILGIS QTLHELYLTN NALGDTGVCL LCKRLRHPGC
1030 1040 1050
KLRVLWLFGM DLNKKTHRRM AALRVTKPYL DIGC