Descriptions

Discoidin domain receptor 1 (DDR1) is a collagen-activated receptor tyrosine kinase with important functions in organogenesis and tissue homeostasis. The autoinhibition of DDR kinase activity is released by a two-step. First, phosphorylation of JM4 tyrosines likely ejects JM4 from the cleft between the kinase N- and C-lobes, resulting in a state of low activity that resembles the inactive kinase alone, with the A-loop still blocking the active site. In the second step, phosphorylation of the A-loop frees up the active site, resulting in a fully active kinase. Interestingly, the glycosylation at the Asn211 position could help to maintain the autoinhibitory state during the trafficking of the receptor to the cell surface by imposing steric or electrostatic effects that translate into downstream conformations.

Autoinhibitory domains (AIDs)

Target domain

668-966 (Protein kinase domain)

Relief mechanism

PTM

Assay

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

0 structures for E7F3X9

Entry ID Method Resolution Chain Position Source

No variants for E7F3X9

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for E7F3X9

No associated diseases with E7F3X9

5 regional properties for E7F3X9

Type Name Position InterPro Accession
conserved_site ATP-dependent RNA helicase DEAD-box, conserved site 344 - 352 IPR000629
domain Helicase, C-terminal domain-like 413 - 574 IPR001650
domain DEAD/DEAH box helicase domain 203 - 390 IPR011545
domain Helicase superfamily 1/2, ATP-binding domain 198 - 417 IPR014001
domain RNA helicase, DEAD-box type, Q motif 179 - 207 IPR014014

Functions

Description
EC Number
Subcellular Localization
  • Cell membrane ; Single-pass type I membrane protein
  • Membrane ; Single-pass type I membrane protein
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
receptor complex Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.

4 GO annotations of molecular function

Name Definition
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
collagen binding Binding to collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%).
protein tyrosine kinase collagen receptor activity Combining with collagen and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.
transmembrane receptor protein tyrosine kinase activity Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.

3 GO annotations of biological process

Name Definition
positive regulation of kinase activity Any process that activates or increases the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
regulation of response to external stimulus Any process that modulates the frequency, rate or extent of a response to an external stimulus.
transmembrane receptor protein tyrosine kinase signaling pathway The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.

25 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q5F3X2 DDR1 receptor protein-tyrosine kinase Gallus gallus (Chicken) SS
Q7YR43 DDR1 Epithelial discoidin domain-containing receptor 1 Pan troglodytes (Chimpanzee) SS
Q16832 DDR2 Discoidin domain-containing receptor 2 Homo sapiens (Human) SS
Q08345 DDR1 Epithelial discoidin domain-containing receptor 1 Homo sapiens (Human) EV
Q62371 Ddr2 Discoidin domain-containing receptor 2 Mus musculus (Mouse) SS
Q03146 Ddr1 Epithelial discoidin domain-containing receptor 1 Mus musculus (Mouse) SS
Q63474 Ddr1 Epithelial discoidin domain-containing receptor 1 Rattus norvegicus (Rat) SS
Q95ZV7 ddr-2 Discoidin domain-containing receptor tyrosine kinase B Caenorhabditis elegans PR
P93050 BSH Probable LRR receptor-like serine/threonine-protein kinase RKF3 Arabidopsis thaliana (Mouse-ear cress) PR
Q8AXB3 kdrl Vascular endothelial growth factor receptor kdr-like Danio rerio (Zebrafish) (Brachydanio rerio) SS
Q5GIT4 kdr Vascular endothelial growth factor receptor 2 Danio rerio (Zebrafish) (Brachydanio rerio) SS
O13146 epha3 Ephrin type-A receptor 3 Danio rerio (Zebrafish) (Brachydanio rerio) SS
O73878 ephb4b Ephrin type-B receptor 4b Danio rerio (Zebrafish) (Brachydanio rerio) SS
F1QVU0 ltk Tyrosine-protein kinase receptor Danio rerio (Zebrafish) (Brachydanio rerio) SS
Q90Z00 fgfr1a Fibroblast growth factor receptor 1-A Danio rerio (Zebrafish) (Brachydanio rerio) SS
Q90413 fgfr4 Fibroblast growth factor receptor 4 Danio rerio (Zebrafish) (Brachydanio rerio) SS
O73791 tek Angiopoietin-1 receptor Danio rerio (Zebrafish) (Brachydanio rerio) SS
Q8JFR5 kita Mast/stem cell growth factor receptor kita Danio rerio (Zebrafish) (Brachydanio rerio) SS
Q9I8N6 csf1r Macrophage colony-stimulating factor 1 receptor Danio rerio (Zebrafish) (Brachydanio rerio) SS
Q9DE49 pdgfra Platelet-derived growth factor receptor alpha Danio rerio (Zebrafish) (Brachydanio rerio) SS
Q5MD89 flt4 Vascular endothelial growth factor receptor 3 Danio rerio (Zebrafish) (Brachydanio rerio) SS
O13147 ephb3 Ephrin type-B receptor 3 Danio rerio (Zebrafish) (Brachydanio rerio) SS
Q9YI66 tyro3 Tyrosine-protein kinase receptor TYRO3 Danio rerio (Zebrafish) (Brachydanio rerio) PR
Q8JG38 fgfr2 Fibroblast growth factor receptor 2 Danio rerio (Zebrafish) (Brachydanio rerio) SS
Q9I8X3 fgfr3 Fibroblast growth factor receptor 3 Danio rerio (Zebrafish) (Brachydanio rerio) PR
10 20 30 40 50 60
MATQMVSLLP ALLIVLLASC TAAQDLDWHF ETAKCRYALG MEDGVIPDSD ITASSAWSDS
70 80 90 100 110 120
TEAKHGRLSN GEGDGAWCPA GPVFPSASEF LQVDLRKLHF LSLVGTQGRH ADGLGREFAR
130 140 150 160 170 180
SYRLRYSRDG RHWMTWKDRW GQEVVSGNEN TYDIVLKDLG PPIIARMVRF YPLADRVMSV
190 200 210 220 230 240
CLRVELYGCV WKDGLKAYTA PLGHVMDLSG SLVNFNDSVY DGSKEGGVIF GGLGQLCDGV
250 260 270 280 290 300
LGGNDFMESK ELRVWPGYDY VGWNRETLGQ PTVDIEFHFE KTRIFHTMQV HSNNRHTQGV
310 320 330 340 350 360
RVFSEVVCKF KASLLSPWAE PELSLQVSDL HDLSSRTISL PLGGRPAQIL RCHFAFADNW
370 380 390 400 410 420
LLISEISFYS MPFEDGSVLP PIPSSSSRPL NATSYSPITA NATSSPTNLL MTNSSLLPSS
430 440 450 460 470 480
MPTEMSGITL RVGIPVAKDD SSHTAILIGC LVGIILLLLA VIVVILWRQY WKKLLGKAQG
490 500 510 520 530 540
SLSSDELRVH LSVPSDNVVI NNTNTHTYSS RYQRIHTFPD DRDREGEYQE PSTVLRPRDQ
550 560 570 580 590 600
RDSTALLLNN PAYHLLLSDL THGPNRLTNC HSQQEKPLNL SQACAIDMVD KGLPIQEGPP
610 620 630 640 650 660
PYPGAPPPGL SGAHYGEASG GGASVPHYAE ADIISLQGVS GNNTYAVPAL SATPTDCPPL
670 680 690 700 710 720
PELPRERLVF KEKLGEGQFG EVHLCEIENP QDLANLEFPF NVRKGRPLLV AVKILRPDAS
730 740 750 760 770 780
KNARNDFLKE VKILSRLKDP NIIRLLGVCV SSDPLCMVTE YMESGDLNQY LSHRVLLDKS
790 800 810 820 830 840
GPSQNTPTIS YPALISMASQ IASGMKFLAS LNFVHRDLAT RNCLVGGERG ESEERGGERH
850 860 870 880 890 900
IKIADFGMSR NLYAGDYYRI QGRAVLPIRW MAWECILMGK FTTASDVWAF GVTLWEMLSV
910 920 930 940 950 960
CQEQPYSHMT DEQVIDNAGE FFRDQGRQVY LSRPAVCPQG LYELMLSCWN RDCKLRPSFA
970
YIHSFLTEDA MNMV